Pregenerated sensors for OAT (Homo sapiens)
Ensembl gene IDs: ENSG00000065154Ensembl transcript IDs: ENST00000467675.5, ENST00000483711.1, ENST00000490096.5, ENST00000492376.1, ENST00000539214.5
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGAGACTAAGACTAAGGTGGAAAGATCTCTTGAGCCCTGAGTTCTaGGCTGCAGTGAGCCACGATCTGTGCCACCAGCACTCCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RRLRLRWKDLLSPEF*AAVSHDLCHQHSSL Trigger: CAGGCTGGAGTGCTGGTGGCACAGATCGTGGCTCACTGCAGCCCAGAACTCAGGGCTCAAGAGATCTTTCCACCTTAGTCTTAGTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490096.5 |
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| CDS TCA 72 bp | CAGCGCCTGAGGACAACCGGGTACACGCGGCGTCTATaGAGCGCAACAGTGACGCCGGAGAGTCACTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: QRLRTTGYTRRL*SATVTPESHCN Trigger: GTTGCAGTGACTCTCCGGCGTCACTGTTGCGCTTCATAGACGCCGCGTGTACCCGGTTGTCCTCAGGCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539214.5 |
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| CDS CCA 72 bp | AGACTAAGGTGGAAAGATCTCTTGAGCCCTGAGTTCTaGGCTGCAGTGAGCCACGATCTGTGCCACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RLRWKDLLSPEF*AAVSHDLCHQH Trigger: GTGCTGGTGGCACAGATCGTGGCTCACTGCAGCCCAGAACTCAGGGCTCAAGAGATCTTTCCACCTTAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490096.5 |
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| CDS TCA 72 bp | GAGACTAAGACTAAGGTGGAAAGATCTCTTGAGCCCTaGGTTCTGGGCTGCAGTGAGCCACGATCTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: ETKTKVERSLEP*VLGCSEPRSVP Trigger: TGGCACAGATCGTGGCTCACTGCAGCCCAGAACTCAGGGCTCAAGAGATCTTTCCACCTTAGTCTTAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490096.5 |
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| CDS CAA 72 bp | GTACTTAGGAGACTAAGACTAAGGTGGAAAGATCTCTaGAGCCCTGAGTTCTGGGCTGCAGTGAGCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: VLRRLRLRWKDL*SPEFWAAVSHD Trigger: ATCGTGGCTCACTGCAGCCCAGAACTCAGGGCTCAAGAGATCTTTCCACCTTAGTCTTAGTCTCCTAAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490096.5 |
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| CDS CAA 90 bp | CCCACTGACTCACCAGCTTCTTTCAATACTCAGGTGAAAACATCTTaGCACCCTTTGCTATTAAGAAAGAGACTGGACACAGTCTATAAG | + |
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Preference number: 6 (lower is better) Translates to: PTDSPASFNTQVKTS*HPLLLRKRLDTVYK Trigger: CTTATAGACTGTGTCCAGTCTCTTTCTTAATAGCAAAGGGTGCAAAGATGTTTTCACCTGAGTATTGAAAGAAGCTGGTGAGTCAGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467675.5 |
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| CDS CAA 72 bp | AGGGCTTGCTTTAGTGCACCTTCGGTGGGCTTTCAATaGTTAAAACAAAGTCTGATATTAAACACCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: RACFSAPSVGFQ*LKQSLILNTMA Trigger: AGCCATGGTGTTTAATATCAGACTTTGTTTTAACAATTGAAAGCCCACCGAAGGTGCACTAAAGCAAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483711.1 |
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| CDS CAA 90 bp | CTCTTGATTCGAGCTGCCAAATTAGCAAAACATAATACTTGGAGTTaGGCTTACTTCCCTTTAAACTTGGCACTACCCAGTAAATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LLIRAAKLAKHNTWS*AYFPLNLALPSKSS Trigger: ACTGGATTTACTGGGTAGTGCCAAGTTTAAAGGGAAGTAAGCCAAACTCCAAGTATTATGTTTTGCTAATTTGGCAGCTCGAATCAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492376.1 |
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| CDS CAA 72 bp | TCACCAGCTTCTTTCAATACTCAGGTGAAAACATCTTaGCACCCTTTGCTATTAAGAAAGAGACTGGACACA | + |
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Preference number: 6 (lower is better) Translates to: SPASFNTQVKTS*HPLLLRKRLDT Trigger: TGTGTCCAGTCTCTTTCTTAATAGCAAAGGGTGCAAAGATGTTTTCACCTGAGTATTGAAAGAAGCTGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467675.5 |
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| CDS CAA 72 bp | CTACCCAGTAAATCCAGTATGTTCAGGAATTTGCAATaGCTAAACAAAATCCAGTACTCCGGTTTGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LPSKSSMFRNLQ*LNKIQYSGLPK Trigger: CTTTGGCAAACCGGAGTACTGGATTTTGTTTAGCAATTGCAAATTCCTGAACATACTGGATTTACTGGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492376.1 |
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| CDS CAA 90 bp | AATAAATCAAGGGCTTGCTTTAGTGCACCTTCGGTGGGCTTTCAATaGTTAAAACAAAGTCTGATATTAAACACCATGGCTCCTATGACA | + |
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Preference number: 6 (lower is better) Translates to: NKSRACFSAPSVGFQ*LKQSLILNTMAPMT Trigger: TGTCATAGGAGCCATGGTGTTTAATATCAGACTTTGTTTTAACAATTGAAAGCCCACCGAAGGTGCACTAAAGCAAGCCCTTGATTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483711.1 |
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| CDS CAA 72 bp | TCTTTCAATACTCAGGTGAAAACATCTTTGCACCCTTaGCTATTAAGAAAGAGACTGGACACAGTCTATAAG | + |
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Preference number: 6 (lower is better) Translates to: SFNTQVKTSLHP*LLRKRLDTVYK Trigger: CTTATAGACTGTGTCCAGTCTCTTTCTTAATAGCAAAGGGTGCAAAGATGTTTTCACCTGAGTATTGAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467675.5 |
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| CDS CAA 90 bp | TCACCAGCTTCTTTCAATACTCAGGTGAAAACATCTTTGCACCCTTaGCTATTAAGAAAGAGACTGGACACAGTCTATAAGAATGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SPASFNTQVKTSLHP*LLRKRLDTVYKNEN Trigger: ATTTTCATTCTTATAGACTGTGTCCAGTCTCTTTCTTAATAGCAAAGGGTGCAAAGATGTTTTCACCTGAGTATTGAAAGAAGCTGGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467675.5 |
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