RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OAS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000111335

Ensembl transcript IDs: ENST00000342315.8, ENST00000392583.7, ENST00000449768.2, ENST00000551603.2, ENST00000552756.6, ENST00000620097.2, ENST00000679877.1, ENST00000680122.1, ENST00000680138.1, ENST00000680514.1, ENST00000680666.1, ENST00000680685.1, ENST00000680898.1, ENST00000681023.1, ENST00000681673.1

Found 1604 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGACC +
Preference number: 1 (lower is better)
Translates to: LSSREVRGFIQINEP*INLGAGCGARTQLT
Trigger: GGTCAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR TCA 90 bp GTTGCACAGAGCTGTCTGGCACCCGCTTCTTTGGCTTTTCTCTCCTaGCACCCAGCAATGCTTACTCAGAGCGTTGAAGGCGGCCAGCAC +
Preference number: 1 (lower is better)
Translates to: VAQSCLAPASLAFLS*HPAMLTQSVEGGQH
Trigger: GTGCTGGCCGCCTTCAACGCTCTGAGTAAGCATTGCTGGGTGTCAGGAGAGAAAAGCCAAAGAAGCGGGTGCCAGACAGCTCTGTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR GCA 90 bp TATGGAACACGACGAGATCGGCATCAGAGCCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTCCCCGGACAATCTGGATCTTGGCTG +
Preference number: 1 (lower is better)
Translates to: YGTRRDRHQSQSSEL*LWRLILPGQSGSWL
Trigger: CAGCCAAGATCCAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTGGCTCTGATGCCGATCTCGTCGTGTTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR GCA 90 bp GAAAGGAAGGTTGAGATCCAGAATTTCCTTAACCGAGGAGTCCCGTaGCCCCGTGGGCTGGCACCAGTTGGGCTAACTGACACTGTTTCC +
Preference number: 1 (lower is better)
Translates to: ERKVEIQNFLNRGVP*PRGLAPVGLTDTVS
Trigger: GGAAACAGTGTCAGTTAGCCCAACTGGTGCCAGCCCACGGGGGCACGGGACTCCTCGGTTAAGGAAATTCTGGATCTCAACCTTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR GCA 90 bp GTCTGGCACCCGCTTCTTTGGCTTTTCTCTCCTGACACCCAGCAATaGTTACTCAGAGCGTTGAAGGCGGCCAGCACCTCGAAAGAGATT +
Preference number: 1 (lower is better)
Translates to: VWHPLLWLFSPDTQQ*LLRALKAASTSKEI
Trigger: AATCTCTTTCGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGCATTGCTGGGTGTCAGGAGAGAAAAGCCAAAGAAGCGGGTGCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR GCA 90 bp TATGGAACACGACGAGATCGGCATCAGAGCCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTCCCTAAGGAAGAAAGGAAGGTTGAG +
Preference number: 1 (lower is better)
Translates to: YGTRRDRHQSQSSEL*LWRLILPKEERKVE
Trigger: CTCAACCTTCCTTTCTTCCTTAGGGAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTGGCTCTGATGCCGATCTCGTCGTGTTCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR GCA 90 bp ATTAAATCCTTTAGTTTGGTGGGCCGGGAGCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCC +
Preference number: 1 (lower is better)
Translates to: IKSFSLVGRERMKFR*RTVKQVENSPPGRS
Trigger: GGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR CCA 90 bp GCCTTTGGAGAGCTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTaGCATAGAGGATGTCTGTGTCAGCAGGGGCAGAAAGGGTTTTGT +
Preference number: 1 (lower is better)
Translates to: AFGELEVLMKGLAGC*HRGCLCQQGQKGFC
Trigger: ACAAAACCCTTTCTGCCCCTGCTGACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR CCA 90 bp GATGGTGAGCAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTaGCTTCAGTTTCCTTTCACACTCTTTGTACCAGTGCTTCACCAG +
Preference number: 1 (lower is better)
Translates to: DGEQLQGILWGQRPL*LQFPFTLFVPVLHQ
Trigger: CTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTGCTCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR GCA 90 bp TTTTTAAAGCAGCAGTGGTATCTATCCCACTCATGGCCTAGAGGTTaGACAGAGCTGTCTGGCACCCGCTTCTTTGGCTTTTCTCTCCTG +
Preference number: 1 (lower is better)
Translates to: FLKQQWYLSHSWPRG*TELSGTRFFGFSLL
Trigger: CAGGAGAGAAAAGCCAAAGAAGCGGGTGCCAGACAGCTCTGTGCAACCTCTAGGCCATGAGTGGGATAGATACCACTGCTGCTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR TCA 90 bp AAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAG +
Preference number: 1 (lower is better)
Translates to: KGRRNRDHQGKNGCE*LFLTVSRVFKSDCQ
Trigger: CTGGCAATCGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR TCA 90 bp AAAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACTGGGAGAGGAGGGCTAGTGGCATCT +
Preference number: 1 (lower is better)
Translates to: KGRKICEPRGTFDNV*RLLVVTGRGGLVAS
Trigger: AGATGCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR TCA 90 bp CCTCTTACTCTAACCAACACTGACTCTGGTCAAAACCTGCAAGCATaGTCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATG +
Preference number: 1 (lower is better)
Translates to: PLTLTNTDSGQNLQA*SADQQLIMELARNM
Trigger: CATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAGTCAGTGTTGGTTAGAGTAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR GCA 90 bp GCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATaGACAAGAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGT +
Preference number: 1 (lower is better)
Translates to: ASTGYRPEMLLNILQ*TREPPNKELSSPKC
Trigger: ACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR GCA 90 bp ATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTaGTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAGAAC +
Preference number: 1 (lower is better)
Translates to: IVTTGWHLLGTGQRC*STSYNAQESLQTKN
Trigger: GTTCTTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR TCA 90 bp TTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCC +
Preference number: 1 (lower is better)
Translates to: FKPVTGLFPDNASFR*LLPALSKVVLGFQS
Trigger: GGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR CCA 90 bp GAAAGGGTTTTGTATACAGAGGAAACAGACAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGG +
Preference number: 1 (lower is better)
Translates to: ERVLYTEETDRTWMS*KHREQDHRVMRTKG
Trigger: CCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTTTCCTCTGTATACAAAACCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR CCA 90 bp ATTATAAAGAATACAAATGAAGAGCCAGACAAAGAGTATGTAGGGTaGCAAGCACTGGAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTG +
Preference number: 1 (lower is better)
Translates to: IIKNTNEEPDKEYVG*QALEGPRAQEPLSL
Trigger: CAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTCCAGTGCTTGCCACCCTACATACTCTTTGTCTGGCTCTTCATTTGTATTCTTTATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
3UTR TCA 90 bp AAAAGGATGTGTAAACAGACTGCAACCTACTCTTGTGCCAATCACTaGGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCGTTC +
Preference number: 1 (lower is better)
Translates to: KRMCKQTATYSCANH*VSANQRWPTVQISF
Trigger: GAACGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGGTTGCAGTCTGTTTACACATCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR CCA 90 bp AGAAGACACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTaGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATC +
Preference number: 1 (lower is better)
Translates to: RRHMIKSQDTFNCHN*VASTGYRPEMLLNI
Trigger: GATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR CCA 90 bp GAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTaGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAA +
Preference number: 1 (lower is better)
Translates to: EHLIDNRMDPSSTTS*CLHCLKRKTYVGEQ
Trigger: TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR TCA 90 bp AGGAAAAGACAACAGCCTCATATAAATATGACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAAGTTCTAATGAAAGGGTTGGCTGGC +
Preference number: 1 (lower is better)
Translates to: RKRQQPHINMTTVII*AFGELEVLMKGLAG
Trigger: GCCAGCCAACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGTCATATTTATATGAGGCTGTTGTCTTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR TCA 90 bp GAAGTTTCTTTTAGAATTATTATTCAGGATTCTATGGCTTCTGGATaGGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACT +
Preference number: 1 (lower is better)
Translates to: EVSFRIIIQDSMASG*EHLIDNRMDPSSTT
Trigger: AGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGAATCCTGAATAATAATTCTAAAAGAAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGAACCGAGGAGTCCCGTaGCCCCGTGGGCTGGCACCA +
Preference number: 2 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGENRGVP*PRGLAP
Trigger: TGGTGCCAGCCCACGGGGGCACGGGACTCCTCGGTT...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR CCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGCTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 2 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAAGTCCCGTGCCCCCGTaGGCTGGCACCAGTTGGGCT +
Preference number: 2 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPSPVPP*AGTSWA
Trigger: AGCCCAACTGGTGCCAGCCCACGGGGGCACGGGACT...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR TCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 2 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLSLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GAAAGGAAGGTTGAGATCCAGAATTTCCTTAACCGAGGAGTCCCGTGCCCCCGTTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: ERKVEIQNFLNRGVPCPRWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...ACGGGGGCACGGGACTCCTCGGTTAAGGAAATTCTGGATCTCAACCTTCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR TCA 90 bp CAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 2 (lower is better)
Translates to: QDCPETFCSVKIRHSTPLPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...CAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 2 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGACAGGCCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 2 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLTGLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGT...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCGGCTTTGGAGAGGTGTaGCAGACATCCTTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSGFGEV*QTSLGG
Trigger: GCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCC...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCCCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 2 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 2 (lower is better)
Translates to: GRHPWVASATHVHSHLCSTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCTGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCAC +
Preference number: 2 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTCGRHP*VASATH
Trigger: GTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACA...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 2 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGCGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTACATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: VADILGWPVQPTSTVIFVHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 2 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
3UTR-3UTR TCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCACAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 2 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR TCA 90 bp ACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 2 (lower is better)
Translates to: TPTVPSTHVTCGFGWVQDLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...ATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: YRPEMLLNILQCTREPPNWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTCCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 2 (lower is better)
Translates to: LQDCETGRKLSSREVRGFPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAGGTGGCCTGGGGTCGTaGAGAGTGGTGCAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: RPEMLLNILQCTREPPNKGGLGS*RVVQAE
Trigger: TTCTGCCTGCACCACTCTTCACGACCCCAGGCCACC...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR GCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCTCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRASLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: INEPCINLGAGCGARTQLRTWMS*KHREQD
Trigger: ATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCT...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACTGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 2 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCGCAGACATCCTTGGGTaGCCAGTGCAACCCACGTCC +
Preference number: 2 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPADILG*PVQPTS
Trigger: GGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGC...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CCA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCCGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 2 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
3UTR-3UTR TCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 2 (lower is better)
Translates to: INEPCINLGAGCGARTQLREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTCAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 2 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR TCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 2 (lower is better)
Translates to: NHSFASFARRCQHQRSPPQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTTCTGCTGGAGTTCAGTaGAGCAGACTGCAAACTCAC +
Preference number: 2 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCSAGVQ*SRLQTH
Trigger: GTGAGTTTGCAGTCTGCTTCACTGAACTCCAGCAGA...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACGCTTCTCCTGGCATTTaGTCAGCTCCAGTACGGTTC +
Preference number: 2 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYASPGI*SAPVRF
Trigger: GAACCGTACTGGAGCTGATCAAATGCCAGGAGAAGC...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGGCAGCAGGATGTTCCTaGTGGTCTCATCTTCAAAGT +
Preference number: 2 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLAAGCS*WSHLQS
Trigger: ACTTTGAAGATGAGACCATCAGGAACATCCTGCTGC...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCATGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp TCCAGAATTTCCTTAACCGAGGAGTCCCGTGCCCCCGTGGGCTGGCACCAGTTGCCTGCCTTTTATACATaGACAACTGATGGGCTAGTT +
Preference number: 2 (lower is better)
Translates to: SRISLTEESRAPVGWHQLPAFYT*TTDGLV
Trigger: AACTAGCCCATCAGTTGTTCATGTATAAAAGGCAGG...CAACTGGTGCCAGCCCACGGGGGCACGGGACTCCTCGGTTAAGGAAATTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR GCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACTCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: YRPEMLLNILQCTREPPNSLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVLNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 2 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTGCTGATTGGAGCTGGTaGAGCAGGATGTTCCTGATG +
Preference number: 2 (lower is better)
Translates to: IQINEPCINLGAGCGARTADWSW*SRMFLM
Trigger: CATCAGGAACATCCTGCTGCACCAGCTCCAATCAGC...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACCACCTCCTTGGAGATTaGGGGTGGGATGGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDHLLGD*GWDGAE
Trigger: TTCAGCCCCATCCCACCCCCAATCTCCAAGGAGGTG...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCACCTCCTTGGAGATTaGGGGTGGGATGGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCHLLGD*GWDGAE
Trigger: TTCAGCCCCATCCCACCCCCAATCTCCAAGGAGGTG...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTTGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 2 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: ILVEYIRYILVGREGFGEWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp CTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTGCTTACTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 2 (lower is better)
Translates to: LVPITEFRPIKGGQLFKSAYSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGC...AGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR TCA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGG +
Preference number: 2 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPYPRIF*ALDRSR
Trigger: CCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATA...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACGATTACTGGCCTCGCTaGTTGGAGCTGGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHDYWPR*LELVQQ
Trigger: CTGCTGCACCAGCTCCAATCAGCGAGGCCAGTAATC...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp TTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCATGTGCCTTTGGCGGTTaGTCCTCCCCGGACAATCTG +
Preference number: 2 (lower is better)
Translates to: FYRHFPRWYWVSSPILEACAFGG*SSPDNL
Trigger: CAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACA...TGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR GCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACTTGGATTGCAAACCTaGCATCTGGAGGCACCGTGG +
Preference number: 2 (lower is better)
Translates to: NHSFASFARRCQHQRSPPLGLQT*HLEAPW
Trigger: CCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAG...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGCTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLLNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 2 (lower is better)
Translates to: GRHPWVASATHVHSHLCSRMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTCACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 2 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCATGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 2 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNACPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 2 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACCAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: YRPEMLLNILQCTREPPNQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTGGGTTGGCTGGCTGCTaGCATAGAGGATGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: YIGMSANQEAPQASLSRVGLAGC*HRGCLC
Trigger: ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCC...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATCACCTCCTTGGAGATTaGGGGTGGGATGGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: NRQDVDELEAPRARSQSYHLLGD*GWDGAE
Trigger: TTCAGCCCCATCCCACCCCCAATCTCCAAGGAGGTG...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GRHPWVASATHVHSHLCSMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAATGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 2 (lower is better)
Translates to: RPEMLLNILQCTREPPNKCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGGCAGACATCCTTGGGTaGCCAGTGCAACCCACGTCC +
Preference number: 2 (lower is better)
Translates to: KERTWWREPSISGGRISWADILG*PVQPTS
Trigger: GGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGC...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATTGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCAC +
Preference number: 2 (lower is better)
Translates to: NRQDVDELEAPRARSQSYCGRHP*VASATH
Trigger: GTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACA...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGGCTTTGGAGAGGTGTaGCAGACATCCTTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: NRQDVDELEAPRARSQSYGFGEV*QTSLGG
Trigger: GCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCC...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GCTGGGTCCAAGATCACAGGCCTGGTTTTCTGCAACTGGCTCAGTAGAAACTTCCTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 2 (lower is better)
Translates to: AGSKITGLVFCNWLSRNFLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...GAAGTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGGACCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGCCAAGATCACAGGCCTaGTTTTCTGCAACTGGCTCA +
Preference number: 2 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGPRSQA*FSATGS
Trigger: TGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGG...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCCAAGATCACAGGCCTaGTTTTCTGCAACTGGCTCA +
Preference number: 2 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTPRSQA*FSATGS
Trigger: TGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGG...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCACACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACCTCGCTGATTGGAGCTaGTGCAGCAGGATGTTCCTG +
Preference number: 2 (lower is better)
Translates to: YRPEMLLNILQCTREPPNLADWS*CSRMFL
Trigger: CAGGAACATCCTGCTGCACCAGCTCCAATCAGCGAG...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCTTTTAAGTGAGTTATaGAACACGACGAGATCGGCA +
Preference number: 2 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVLLSEL*NTTRSA
Trigger: TGCCGATCTCGTCGTGTTCCATAACTCACTTAAAAG...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCATCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: NHSFASFARRCQHQRSPPSELCL*RLILPA
Trigger: AGCAGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680138.1
3UTR-3UTR CCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCTAAG +
Preference number: 2 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSSELCL*RLILPK
Trigger: CTTAGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR CAA 90 bp AGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTTCCTAGTACATaGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: SLCPCGIKMRYLPST*ECLPIRKLPKPHCP
Trigger: TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTTGATTCCACAGGGACAAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR TCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 2 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCAAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 2 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNAKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 2 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCAAGGAATGAATCGTaGCCCCAGCAGAGGAAAATC +
Preference number: 2 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNARNES*PQQRKI
Trigger: GATTTTCCTCTGCTGGGGTCACGATTCATTCCTTGC...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR TCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAACCAGTTGGGCTAACTaGCACTGTTTCCAAGGCCAA +
Preference number: 2 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPTSWAN*HCFQGQ
Trigger: TTGGCCTTGGAAACAGTGTCAGTTAGCCCAACTGGT...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR CCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCGCCCCATCACCTCCTTaGAGATTGGGGGTGGGATGG +
Preference number: 2 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFAPSPP*RLGVGW
Trigger: CCATCCCACCCCCAATCTCCAAGGAGGTGATGGGGC...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTGCCCCATCACCTCCTTaGAGATTGGGGGTGGGATGG +
Preference number: 2 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFAPSPP*RLGVGW
Trigger: CCATCCCACCCCCAATCTCCAAGGAGGTGATGGGGC...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 2 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 2 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGCAGACATCCTTGGGTaGCCAGTGCAACCCACGTCC +
Preference number: 2 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGADILG*PVQPTS
Trigger: GGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGC...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGGCTTTGGAGAGGTGTaGCAGACATCCTTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPGFGEV*QTSLGG
Trigger: GCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCC...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 2 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGAGAAGCTCAGCACCCTaGGAGCCTTCCACTTGGGAG +
Preference number: 2 (lower is better)
Translates to: ILVEYIRYILVGREGFGERSSAP*EPSTWE
Trigger: CTCCCAAGTGGAAGGCTCCCAGGGTGCTGAGCTTCT...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAA +
Preference number: 2 (lower is better)
Translates to: INEPCINLGAGCGARTQLTTVII*AFGELE
Trigger: TTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGT...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACGGGGTGGGATGGGGCTaGAAATTCCAATGCTTTAAC +
Preference number: 2 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDGVGWG*KFQCFN
Trigger: GTTAAAGCATTGGAATTTTCAGCCCCATCCCACCCC...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 2 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGETQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp AAGAGTGTGGGAATGTTTGCTGAGACAGGAGACACAAGAGGTGGGCAGGTCTTATGTGGGAATGTTTGCTaGGACAGGAGACACAAGAGG +
Preference number: 2 (lower is better)
Translates to: KSVGMFAETGDTRGGQVLCGNVC*DRRHKR
Trigger: CCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACA...TAAGACCTGCCCACCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR TCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 2 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGTGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTTGTGCCTTTGGCGGTTaGTCCTCCCTAAGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASCAFGG*SSLRKK
Trigger: TTTCTTCCTTAGGGAGGATCAACCGCCAAAGGCACA...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR GCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGCTTGGATTGCAAACCTaGCATCTGGAGGCACCGTGG +
Preference number: 2 (lower is better)
Translates to: ILVEYIRYILVGREGFGELGLQT*HLEAPW
Trigger: CCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAG...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTTCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFSLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCAATCAAATACAATGTTaGCAAGAACCCAGGGTAGGC +
Preference number: 2 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSNQIQC*QEPRVG
Trigger: GCCTACCCTGGGTTCTTGGCAACATTGTATTTGATT...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACCATGCTTGGTCTTTCTaGCTTGGCCAACTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDHAWSF*LGQLLP
Trigger: AGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATG...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCATGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCAC +
Preference number: 2 (lower is better)
Translates to: WWREPSISGGRISWWNISCGRHP*VASATH
Trigger: GTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACA...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 2 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 2 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 2 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATGAAATCCTGGGCTAGGAGACACAAGAGGTaGGCAGGTCTTAGGGATTTA +
Preference number: 2 (lower is better)
Translates to: SADQQLIMELARNMKSWARRHKR*AGLRDL
Trigger: TAAATCCCTAAGACCTGCCCACCTCTTGTGTCTCCT...AGCCCAGGATTTCATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAACTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 2 (lower is better)
Translates to: DFYRHFPRWYWVSSPILELQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCT +
Preference number: 2 (lower is better)
Translates to: IQINEPCINLGAGCGARTIGWVN*IQDYWP
Trigger: AGGCCAGTAATCTTGGATCCAGTTGACCCAACCAAT...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGGCTTTCAGCTGTTCATaGATTTCCTTGACGATTTTG +
Preference number: 2 (lower is better)
Translates to: INEPCINLGAGCGARTQLAFSCS*ISLTIL
Trigger: CAAAATCGTCAAGGAAATCCATGAACAGCTGAAAGC...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGATGTGACAGGTTCTGTTaGCTAGCACTTTCCCCCGTC +
Preference number: 2 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGCDRFC*LALSPV
Trigger: GACGGGGGAAAGTGCTAGCCAACAGAACCTGTCACA...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 2 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 2 (lower is better)
Translates to: VDELEAPRARSQSYENQGKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTATTGGTTGGGTCAACTGGATCCAAGATTACTGGCCTCGCTGATTGGAGCTGGAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 2 (lower is better)
Translates to: LLVGSTGSKITGLADWSWKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...CCAGCTCCAATCAGCGAGGCCAGTAATCTTGGATCCAGTTGACCCAACCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTCAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 2 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTGGGGTGGGATGGGGCTaGAAATTCCAATGCTTTAAC +
Preference number: 2 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCGVGWG*KFQCFN
Trigger: GTTAAAGCATTGGAATTTTCAGCCCCATCCCACCCC...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GCTGGGTCCAAGATCACAGGCCTGGTTTTCTGCAACTGGCTCAGTAGAAACTTCGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: AGSKITGLVFCNWLSRNFVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...GAAGTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGGACCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGCTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 2 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 2 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCTFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 2 (lower is better)
Translates to: VADILGWPVQPTSTVIFVKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp ACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAAGGGATTCTTCTCTCCTaGGGGTCTATGGTCTCCCAT +
Preference number: 2 (lower is better)
Translates to: TLVPITEFRPIKGGQLFKGILLS*GSMVSH
Trigger: ATGGGAGACCATAGACCCTCAGGAGAGAAGAATCCC...TTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR TCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 2 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTTGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: AENSNALTTCLVFLAWPTWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAAGTGGGAGGATCACTTaGGGGCCAGGAGTTCGAGAA +
Preference number: 2 (lower is better)
Translates to: LEAPRARSQSYENQGESKSGRIT*GPGVRE
Trigger: TTCTCGAACTCCTGGCCCTCAAGTGATCCTCCCACT...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR GCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPLNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAATGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 2 (lower is better)
Translates to: DFYRHFPRWYWVSSPILECPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGATTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 2 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: NRQDVDELEAPRARSQSYRTWMS*KHREQD
Trigger: ATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCT...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: GAENSNALTTCLVFLAWPRTWMS*KHREQD
Trigger: ATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAAAAAGTCTTTTGATTTaGCAAGAGGATACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: VADILGWPVQPTSTVIFVKSLLI*QEDTPG
Trigger: CCCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp CAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTGGCTTCAGTTTCCTTTCCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 2 (lower is better)
Translates to: QLQGILWGQRPLWLQFPFLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...GAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGCGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: KERTWWREPSISGGRISWRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR CAA 90 bp TATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTTGGAGAGGTGTGGCAGACATCCTTG +
Preference number: 2 (lower is better)
Translates to: YIWREDILVEYIRYI*VGREGFGEVWQTSL
Trigger: CAAGGATGTCTGCCACACCTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRASLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCAACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAA +
Preference number: 2 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNATTVII*AFGELE
Trigger: TTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGT...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGGGGGTGGGATGGGGCTaGAAATTCCAATGCTTTAAC +
Preference number: 2 (lower is better)
Translates to: ILVEYIRYILVGREGFGEGVGWG*KFQCFN
Trigger: GTTAAAGCATTGGAATTTTCAGCCCCATCCCACCCC...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGGGGATTCTTCTCTCCTaGGGGTCTATGGTCTCCCAT +
Preference number: 2 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKGILLS*GSMVSH
Trigger: ATGGGAGACCATAGACCCTCAGGAGAGAAGAATCCC...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR TCA 90 bp CCTACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCTACTCTAACCAACACTaGCTCTGGTCAAAACCTGCA +
Preference number: 2 (lower is better)
Translates to: PTLVPITEFRPIKGGQLFYSNQH*LWSKPA
Trigger: TGCAGGTTTTGACCAGAGTCAGTGTTGGTTAGAGTA...GAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR TCA 90 bp CACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCACCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 2 (lower is better)
Translates to: HNFLVSALSKKKNIRGRAPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...TGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAGTTCATGGATTTCCTTaGCGATTTTGTGCCGCTCGT +
Preference number: 2 (lower is better)
Translates to: RPEMLLNILQCTREPPNKVHGFP*RFCAAR
Trigger: ACGAGCGGCACAAAATCGTCAAGGAAATCCATGAAC...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGCTTGGATTGCAAACCTaGCATCTGGAGGCACCGTGG +
Preference number: 2 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRLGLQT*HLEAPW
Trigger: CCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAG...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACCTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDLNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 2 (lower is better)
Translates to: RPEMLLNILQCTREPPNKTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 2 (lower is better)
Translates to: YRPEMLLNILQCTREPPNRMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 2 (lower is better)
Translates to: VQARDAAQHPTMHKRASKRMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGATCATGGCCTAGAGGTTaGACAGAGCTGTCTGGCACC +
Preference number: 2 (lower is better)
Translates to: IFSKDNQGMGEKLVPEKRSWPRG*TELSGT
Trigger: GGTGCCAGACAGCTCTGTGCAACCTCTAGGCCATGA...TCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR GCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTTCAGTGAAGCAGACTaGAAACTCACCAGGACTGGC +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLFSEAD*KLTRTG
Trigger: GCCAGTCCTGGTGAGTTTGCAGTCTGCTTCACTGAA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR GCA 90 bp AGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCGGTCGTGAAGAGTGGTaGAGGCAGAACATTCCAAGA +
Preference number: 2 (lower is better)
Translates to: SLKTLLIVTTGWHLLGTGGREEW*RQNIPR
Trigger: TCTTGGAATGTTCTGCCTGCACCACTCTTCACGACC...GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR GCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATCAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACTTGGTCTTTCTGGCTTaGCCAACTCCTTCCTTGAAA +
Preference number: 2 (lower is better)
Translates to: YRPEMLLNILQCTREPPNLVFLA*PTPSLK
Trigger: TTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAA...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 2 (lower is better)
Translates to: WWREPSISGGRISWWNISTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CCA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 2 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 2 (lower is better)
Translates to: YIGMSANQEAPQASLSRVRTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 2 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASRTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCTTTAATTGTCACAACTaGGTGGCATCTACTGGGTAC +
Preference number: 2 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRAFNCHN*VASTGY
Trigger: GTACCCAGTAGATGCCACCCAGTTGTGACAATTAAA...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATTTTAATTGTCACAACTaGGTGGCATCTACTGGGTAC +
Preference number: 2 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNFNCHN*VASTGY
Trigger: GTACCCAGTAGATGCCACCCAGTTGTGACAATTAAA...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGACCCCACGGTTGGCTTaGCCACCTCTTCCCTACATT +
Preference number: 2 (lower is better)
Translates to: KSLAMLKLNSISSPITSLTPRLA*PPLPYI
Trigger: AATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGT...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATAGCTCCACAACTTCCTaGTGTCTGCATTGTCTAAAA +
Preference number: 2 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNSSTTS*CLHCLK
Trigger: TTTTAGACAATGCAGACACCAGGAAGTTGTGGAGCT...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATGAAATCCTGGGCTCAATATGCAAGAGTGTaGGAATGTTTGCTGAGACAG +
Preference number: 2 (lower is better)
Translates to: SADQQLIMELARNMKSWAQYARV*ECLLRQ
Trigger: CTGTCTCAGCAAACATTCCCACACTCTTGCATATTG...AGCCCAGGATTTCATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAACTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 2 (lower is better)
Translates to: LEAPRARSQSYENQGESKLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAACTCATTATCCAGGTTaGGAGAAGTCAACCAGGTTT +
Preference number: 2 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPTHYPG*EKSTRF
Trigger: AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGT...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTTGGGGTCGTGAAGAGTaGTGCAGGCAGAACATTCCA +
Preference number: 2 (lower is better)
Translates to: KAERSVNPGERLTMSEDFWGREE*CRQNIP
Trigger: TGGAATGTTCTGCCTGCACCACTCTTCACGACCCCA...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGT +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLNLSRR*PGVVKS
Trigger: ACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTT...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp TCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: SWCLHCLKRKTYVGEQCLHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...GAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR CAA 90 bp AGAAAGGGTTTTGTATACAGAGGAAACAGACAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGG +
Preference number: 2 (lower is better)
Translates to: RKGFVYRGNRQDVDE*EAPRARSQSYENQG
Trigger: CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTTTCCTCTGTATACAAAACCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 2 (lower is better)
Translates to: KAERSVNPGERLTMSEDFDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 2 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGCAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 2 (lower is better)
Translates to: LISGCYSRRSSLIQACYRQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFSLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR TCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDSLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGGGGTGGGATGGGGCTaGAAATTCCAATGCTTTAAC +
Preference number: 2 (lower is better)
Translates to: LEAPRARSQSYENQGESKGVGWG*KFQCFN
Trigger: GTTAAAGCATTGGAATTTTCAGCCCCATCCCACCCC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: RPEMLLNILQCTREPPNKVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp CTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCCTGTAGGTTCCTTTTaGGTGCCTAGCTACTTGCTT +
Preference number: 2 (lower is better)
Translates to: LVPITEFRPIKGGQLFKSPVGSF*VPSYLL
Trigger: AAGCAAGTAGCTAGGCACTCAAAAGGAACCTACAGG...AGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR TCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCTTCAAAGTTGTAGTTaGCCATCCAATAGATACACA +
Preference number: 2 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTLQSCS*PSNRYT
Trigger: TGTGTATCTATTGGATGGTCAACTACAACTTTGAAG...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTC +
Preference number: 2 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSLDLGC*LSEAVF
Trigger: GAAAACTGCTTCCGACAATCAACAGCCAAGATCCAG...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTGGGTTCAGTGAGGGCTaGGTCCAAAGCAAAGGGTTT +
Preference number: 2 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAGFSEG*VQSKGF
Trigger: AAACCCTTTGCTTTGGACTCAGCCCTCACTGAACCC...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR TCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTGCGTTAGGGTTCAGTaGGGGCTGAGTCCAAAGCAA +
Preference number: 2 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRCVRVQ*GLSPKQ
Trigger: TTGCTTTGGACTCAGCCCTCACTGAACCCTAACGCA...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR GCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 2 (lower is better)
Translates to: VADILGWPVQPTSTVIFVKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGACTCTGGTCAAAACCTaGAAGCATGATCTGCGGACC +
Preference number: 2 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKTLVKT*KHDLRT
Trigger: GGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAGT...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR GCA 90 bp CTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTAAGGCAGACTTCAAATaGTTGCCCCAGCTGGACTTT +
Preference number: 2 (lower is better)
Translates to: LVPITEFRPIKGGQLFKSKADFK*LPQLDF
Trigger: AAAGTCCAGCTGGGGCAAGCATTTGAAGTCTGCCTT...AGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR GCA 90 bp ACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATGCAACCTACTCTTGTaGCAATCACTGAGTTTCGGC +
Preference number: 2 (lower is better)
Translates to: TLVPITEFRPIKGGQLFKCNLLL*QSLSFG
Trigger: GCCGAAACTCAGTGATTGGCACAAGAGTAGGTTGCA...TTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR GCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACCACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 2 (lower is better)
Translates to: YRPEMLLNILQCTREPPNHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTACAGGCCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 2 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSTGLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGT...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCATTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 2 (lower is better)
Translates to: NHSFASFARRCQHQRSPPFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCATGCTTGGTCTTTCTaGCTTGGCCAACTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFHAWSF*LGQLLP
Trigger: AGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATG...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTTGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 2 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAATTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: RPEMLLNILQCTREPPNKFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAAGGAGGGAGGATATCCTaGTGGAATATATCAGGTATA +
Preference number: 2 (lower is better)
Translates to: VQARDAAQHPTMHKRASKGGRIS*WNISGI
Trigger: TATACCTGATATATTCCACCAGGATATCCTCCCTCC...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACGGAGGGAGGATATCCTaGTGGAATATATCAGGTATA +
Preference number: 2 (lower is better)
Translates to: YRPEMLLNILQCTREPPNGGRIS*WNISGI
Trigger: TATACCTGATATATTCCACCAGGATATCCTCCCTCC...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 2 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGRTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp GATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 2 (lower is better)
Translates to: DDFYRHFPRWYWVSSPILLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...AAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGCACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAATACACAGCTTCTCCTaGCATTTGATCAGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: DFYRHFPRWYWVSSPILEIHSFS*HLISSS
Trigger: ACTGGAGCTGATCAAATGCCAGGAGAAGCTGTGTAT...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp TTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAACCCTCGGGGCTGGGTGTaGAGCCAGAACTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: FLQLRCQQLKFTSRVQSNPRGWV*SQNSAD
Trigger: GTCAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGG...GTTACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 2 (lower is better)
Translates to: QDVDELEAPRARSQSYENKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAAACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 2 (lower is better)
Translates to: VQARDAAQHPTMHKRASKTFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 2 (lower is better)
Translates to: ILVEYIRYILVGREGFGETQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCAAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 2 (lower is better)
Translates to: NHSFASFARRCQHQRSPPKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 2 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 2 (lower is better)
Translates to: KAERSVNPGERLTMSEDFTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCACACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 2 (lower is better)
Translates to: FYRHFPRWYWVSSPILEAHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...TGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 2 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGACCTGACACCCAGCAATaGTTACTCAGAGCGTTGAAG +
Preference number: 2 (lower is better)
Translates to: IFSKDNQGMGEKLVPEKRPDTQQ*LLRALK
Trigger: CTTCAACGCTCTGAGTAAGCATTGCTGGGTGTCAGG...TCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR GCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAAATCAAATACAATGTTaGCAAGAACCCAGGGTAGGC +
Preference number: 2 (lower is better)
Translates to: GAENSNALTTCLVFLAWPNQIQC*QEPRVG
Trigger: GCCTACCCTGGGTTCTTGGCAACATTGTATTTGATT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680122.1
3UTR-3UTR GCA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAAGGCAATTATTCTCCTaGCTTTTATACATGAACAAC +
Preference number: 2 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGRQLFS*LLYMNN
Trigger: GTTGTTCATGTATAAAAGGCAGGAGAATAATTGCCT...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR CCA 90 bp TCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: SWCLHCLKRKTYVGEQCLRTWMS*KHREQD
Trigger: ATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCT...GAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TCCAAGATGGTGCAGGTAACTCATTATCCAGGTTGGGAGAAGTCAACCAGGTTTATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SKMVQVTHYPGWEKSTRFMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGTTACCTGCACCATCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTAGCTCCACAACTTCCTaGTGTCTGCATTGTCTAAAA +
Preference number: 2 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCSSTTS*CLHCLK
Trigger: TTTTAGACAATGCAGACACCAGGAAGTTGTGGAGCT...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCTCCACTCACATTATTaGTTGGGTCAACTGGATCCA +
Preference number: 2 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSLHSHY*LGQLDP
Trigger: TGGATCCAGTTGACCCAACCAATAATGTGAGTGGAG...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLSLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: LEAPRARSQSYENQGESKVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: KAERSVNPGERLTMSEDFVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 2 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 2 (lower is better)
Translates to: GAENSNALTTCLVFLAWPTFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GTTCAAATAAGGCCAATGCTGAGCTATAACCAGTCTGGCTGTTTCTGTACCTCACTAACTCAGACCTCCTaGGTCAGGATCTGCATTTTA +
Preference number: 2 (lower is better)
Translates to: VQIRPMLSYNQSGCFCTSLTQTS*VRICIL
Trigger: TAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAG...TGAGGTACAGAAACAGCCAGACTGGTTATAGCTCAGCATTGGCCTTATTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR GCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR GCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: YIGMSANQEAPQASLSRVESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR GCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCATCTTTTCCTTCTTCCTaGTTGGATTGCAAACCTGCC +
Preference number: 2 (lower is better)
Translates to: WWREPSISGGRISWWNISSFPSS*LDCKPA
Trigger: GGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGA...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 2 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCGTTCAAATAAGAAGGCAGACTTCAAATaGTTGCCCCAGCTGGACTTT +
Preference number: 2 (lower is better)
Translates to: TEFRPIKGGQLFKSRSNKKADFK*LPQLDF
Trigger: AAAGTCCAGCTGGGGCAAGCATTTGAAGTCTGCCTT...CTTATTTGAACGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR GCA 90 bp GATTGTCGGAAGCAGTTTTCTTTAAGGAATGTACGGATGATGTTAACAGCACTGTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 2 (lower is better)
Translates to: DCRKQFSLRNVRMMLTALSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...CAGTGCTGTTAACATCATCCGTACATTCCTTAAAGAAAACTGCTTCCGACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAAAAAGTCTTTTGATTTaGCAAGAGGATACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GAENSNALTTCLVFLAWPKSLLI*QEDTPG
Trigger: CCCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCTTGGTCTTTCTGGCTTaGCCAACTCCTTCCTTGAAA +
Preference number: 2 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFLVFLA*PTPSLK
Trigger: TTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAA...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp AATACAAATGAAGAGCCAGACAAAGAGTATGTAGGGTGGCAAGCACTGGAAGGGACCTTCCTAGTACATTaGAATGTCTGCCAATCAGGA +
Preference number: 2 (lower is better)
Translates to: NTNEEPDKEYVGWQALEGTFLVH*NVCQSG
Trigger: TCCTGATTGGCAGACATTCCAATGTACTAGGAAGGT...CCCTTCCAGTGCTTGCCACCCTACATACTCTTTGTCTGGCTCTTCATTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
3UTR-3UTR CCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GATGAGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: DENISLTIGWILAPQLPGMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...ACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAATTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: LEAPRARSQSYENQGESKFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTGGGAGGATATCCTGGTaGAATATATCAGGTATATCT +
Preference number: 2 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCGRISW*NISGIS
Trigger: AGATATACCTGATATATTCCACCAGGATATCCTCCC...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCAGCTCCACAACTTCCTaGTGTCTGCATTGTCTAAAA +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLSSTTS*CLHCLK
Trigger: TTTTAGACAATGCAGACACCAGGAAGTTGTGGAGCT...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATGAAATCCTGGGCTTTTGATAGTTATCTATaGAAGGTCGTTGCCTTGATT +
Preference number: 2 (lower is better)
Translates to: SADQQLIMELARNMKSWAFDSYL*KVVALI
Trigger: AATCAAGGCAACGACCTTCCATAGATAACTATCAAA...AGCCCAGGATTTCATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTCAAACTCACCAGGACTaGCATTTGTCTTATCCAAGG +
Preference number: 2 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFQTHQD*HLSYPR
Trigger: CCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTG...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGGGACAATCTGGATCTTaGCTGTTGATTGTCGGAAGC +
Preference number: 2 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRGQSGS*LLIVGS
Trigger: GCTTCCGACAATCAACAGCCAAGATCCAGATTGTCC...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR CAA 90 bp AGGGTAGGGCATCCTCAGAAAGGAGAAGGAGGAATGCGCCATTCTTaGTTAGTGTCTTCGTTGATAAGAAATTCTAAGGAGCTGTCATTA +
Preference number: 2 (lower is better)
Translates to: RVGHPQKGEGGMRHS*LVSSLIRNSKELSL
Trigger: TAATGACAGCTCCTTAGAATTTCTTATCAACGAAGACACTAACAAAGAATGGCGCATTCCTCCTTCTCCTTTCTGAGGATGCCCTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR TCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFSLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 2 (lower is better)
Translates to: ILVEYIRYILVGREGFGETFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTTTTTTCTGGCACTGTTaGTGCCAGTGCTTTATCAAG +
Preference number: 2 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFFFWHC*CQCFIK
Trigger: CTTGATAAAGCACTGGCATCAACAGTGCCAGAAAAA...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTCTAACACCTCTTAGATaGAAGCAGCTCAGGGACGTG +
Preference number: 2 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTLTPLR*KQLRDV
Trigger: CACGTCCCTGAGCTGCTTTCATCTAAGAGGTGTTAG...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR GCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGAAAGGGTTGGCTGGCTaGTGGCATAGAGGATGTCTG +
Preference number: 2 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEKGLAG*WHRGCL
Trigger: CAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 2 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCACAGGCCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 2 (lower is better)
Translates to: VSELISGCYSRRSSLIQATGLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGT...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 2 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTG +
Preference number: 2 (lower is better)
Translates to: LEAPRARSQSYENQGESKTALSI*SRKHLL
Trigger: CAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGT...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGAAAAGTCTTTTGATTTaGCAAGAGGATACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: SLAMLKLNSISSPITSLEKSLLI*QEDTPG
Trigger: CCCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTT...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAAAAAGTCTTTTGATTTaGCAAGAGGATACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPKSLLI*QEDTPG
Trigger: CCCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTT...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTTTGGTCTTTCTGGCTTaGCCAACTCCTTCCTTGAAA +
Preference number: 2 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFLVFLA*PTPSLK
Trigger: TTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAA...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCGGGAGGATATCCTGGTaGAATATATCAGGTATATCT +
Preference number: 2 (lower is better)
Translates to: RRSSLIQACYRAISRQRLGRISW*NISGIS
Trigger: AGATATACCTGATATATTCCACCAGGATATCCTCCC...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 2 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDRTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAAAAGAAAGAACCTGGTaGAGAGAACCAAGTATATCT +
Preference number: 2 (lower is better)
Translates to: RPEMLLNILQCTREPPNKKERTW*REPSIS
Trigger: AGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCATTTAATTGTCACAACTaGGTGGCATCTACTGGGTAC +
Preference number: 2 (lower is better)
Translates to: WWREPSISGGRISWWNISFNCHN*VASTGY
Trigger: GTACCCAGTAGATGCCACCCAGTTGTGACAATTAAA...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp ACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATTTTTAAAGCAGCAGTaGTATCTATCCCACTCATGG +
Preference number: 2 (lower is better)
Translates to: TLVPITEFRPIKGGQLFKFLKQQ*YLSHSW
Trigger: CCATGAGTGGGATAGATACCACTGCTGCTTTAAAAA...TTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTCCAAGATCACAGGCCTaGTTTTCTGCAACTGGCTCA +
Preference number: 2 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTPRSQA*FSATGS
Trigger: TGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGG...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680138.1
3UTR-3UTR CCA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGACTCACATTATTGGTTaGGTCAACTGGATCCAAGAT +
Preference number: 2 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWTHIIG*VNWIQD
Trigger: ATCTTGGATCCAGTTGACCCAACCAATAATGTGAGT...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR CAA 90 bp GAATTATTATTCAGGATTCTATGGCTTCTGGATGAGAACATCTCATaGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: ELLFRILWLLDENIS*TIGWILAPQLPGVC
Trigger: GCAGACACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGAATCCTGAATAATAATTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR CAA 90 bp TTTGTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: FVSELISGCYSRRSS*IQACYRAISRQRLL
Trigger: AAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 2 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 2 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTCTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 2 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATCTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 2 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAAACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 2 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQTQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTTCTATGGCTTCTGGATaGGAACATCTCATTGACAAT +
Preference number: 2 (lower is better)
Translates to: KAERSVNPGERLTMSEDFSMASG*EHLIDN
Trigger: ATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGA...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ATTGTATTTGCCAAAAGCGTTTTGAAAGCTGTTAATTGCTATACTCATGAAGGCTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 2 (lower is better)
Translates to: IVFAKSVLKAVNCYTHEGFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...GCCTTCATGAGTATAGCAATTAACAGCTTTCAAAACGCTTTTGGCAAATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR TCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 2 (lower is better)
Translates to: LISGCYSRRSSLIQACYRNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACCACTTCGTGATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 2 (lower is better)
Translates to: VNPSRDFWISKLFFNHFVIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR TCA 90 bp ATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGATTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 2 (lower is better)
Translates to: IFSKDNQGMGEKLVPEKRFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...TCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR TCA 90 bp ATTGTATTTGCCAAAAGCGTTTTGAAAGCTGTTAATTGCTATACTCATGAAGGCGCTCCAGTACGGTTCTaGCGCCTTCAGCAATGTCAA +
Preference number: 2 (lower is better)
Translates to: IVFAKSVLKAVNCYTHEGAPVRF*RLQQCQ
Trigger: TTGACATTGCTGAAGGCGTCAGAACCGTACTGGAGC...GCCTTCATGAGTATAGCAATTAACAGCTTTCAAAACGCTTTTGGCAAATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR TCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 2 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATCTTTTCCTTCTTCCTaGTTGGATTGCAAACCTGCC +
Preference number: 2 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQSFPSS*LDCKPA
Trigger: GGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGA...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTCTTTTCCTTCTTCCTaGTTGGATTGCAAACCTGCC +
Preference number: 2 (lower is better)
Translates to: VSELISGCYSRRSSLIQASFPSS*LDCKPA
Trigger: GGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGA...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 2 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR GCA 90 bp ACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCGTTCAAATAAGTCTATGGAAGGTCGTTaGCTTGATTTTGACCTGGTA +
Preference number: 2 (lower is better)
Translates to: TEFRPIKGGQLFKSRSNKSMEGR*LDFDLV
Trigger: TACCAGGTCAAAATCAAGGCAACGACCTTCCATAGA...CTTATTTGAACGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR GCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTCACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 2 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATTTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 2 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR GCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGACTCAGCTGACCCAGTaGATTAAAGGCAGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQETQLTQ*IKGRKH
Trigger: GTGCTTCCTGCCTTTAATGCACTGGGTCAGCTGAGT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGAAAGAAAGAACCTGGTaGAGAGAACCAAGTATATCT +
Preference number: 2 (lower is better)
Translates to: KERTWWREPSISGGRISWKERTW*REPSIS
Trigger: AGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 2 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATAAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 2 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLIREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAA +
Preference number: 2 (lower is better)
Translates to: ISGCYSRRSSLIQACYRATTVII*AFGELE
Trigger: TTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGT...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCGAAAAGGGCTTGTTATaGATACAAAAGACACTCCTA +
Preference number: 2 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFEKGLL*IQKTLL
Trigger: TAGGAGTGTCTTTTGTATTCATAACAAGCCCTTTTC...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 2 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 2 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 2 (lower is better)
Translates to: VSELISGCYSRRSSLIQAIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp ATTGTATTTGCCAAAAGCGTTTTGAAAGCTGTTAATTGCTATACTCATGAAGGCCTAACACCTCTTAGATaGAAGCAGCTCAGGGACGTG +
Preference number: 2 (lower is better)
Translates to: IVFAKSVLKAVNCYTHEGLTPLR*KQLRDV
Trigger: CACGTCCCTGAGCTGCTTTCATCTAAGAGGTGTTAG...GCCTTCATGAGTATAGCAATTAACAGCTTTCAAAACGCTTTTGGCAAATACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR GCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 2 (lower is better)
Translates to: LISGCYSRRSSLIQACYRRMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGTTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: LISGCYSRRSSLIQACYRFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CCA 90 bp GGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGGTCGTTGCCTTGATTTTGTTTGATAGTTATCTATaGAAGGTCGTTGCCTTGATT +
Preference number: 2 (lower is better)
Translates to: GTPSSFDSYLWKVVALILFDSYL*KVVALI
Trigger: AATCAAGGCAACGACCTTCCATAGATAACTATCAAA...CAAAATCAAGGCAACGACCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CCA 90 bp ATTGTATTTGCCAAAAGCGTTTTGAAAGCTGTTAATTGCTATACTCATGAAGGCCCTCCCCGGACAATCTaGATCTTGGCTGTTGATTGT +
Preference number: 2 (lower is better)
Translates to: IVFAKSVLKAVNCYTHEGPPRTI*ILAVDC
Trigger: ACAATCAACAGCCAAGATCCAGATTGTCCGGGGAGG...GCCTTCATGAGTATAGCAATTAACAGCTTTCAAAACGCTTTTGGCAAATACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CCA 90 bp TGTTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAAGTTCGAGAACATCCTaGCCAACATGCAGAAACCCC +
Preference number: 2 (lower is better)
Translates to: CSYSLDVSNSNLLVGFKVSSRTS*PTCRNP
Trigger: GGGGTTTCTGCATGTTGGCCAGGATGTTCTCGAACT...TACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR TCA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATCTATGGCTTCTGGATaGGAACATCTCATTGACAAT +
Preference number: 2 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQSMASG*EHLIDN
Trigger: ATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGA...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGGAAAATCCAGGTTGCTaGGACAGTGTTCAAGGGAAT +
Preference number: 2 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEENPGC*DSVQGN
Trigger: ATTCCCTTGAACACTGTCTCAGCAACCTGGATTTTC...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR GCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 2 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGTTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTAAAGAAAGAACCTGGTaGAGAGAACCAAGTATATCT +
Preference number: 2 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSKERTW*REPSIS
Trigger: AGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR TCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 2 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAACACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 2 (lower is better)
Translates to: FLQLRCQQLKFTSRVQSNTQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...GTTACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR GCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATATTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 2 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLIFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CCA 90 bp TTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAACTTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: FLQLRCQQLKFTSRVQSNFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...GTTACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR CCA 90 bp AAATTGTTTTTCAACCACTTCGTGAACAGACAGAACTTCAGCTTATCCCCAGTTTTTTTAAAGCAGCAGTaGTATCTATCCCACTCATGG +
Preference number: 2 (lower is better)
Translates to: KLFFNHFVNRQNFSLSPVFLKQQ*YLSHSW
Trigger: CCATGAGTGGGATAGATACCACTGCTGCTTTAAAAA...AACTGGGGATAAGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAAACAATTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR TCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 2 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR TCA 90 bp TGTTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAGAAAAGGGCTTGTTATaGATACAAAAGACACTCCTA +
Preference number: 2 (lower is better)
Translates to: CSYSLDVSNSNLLVGFKVEKGLL*IQKTLL
Trigger: TAGGAGTGTCTTTTGTATTCATAACAAGCCCTTTTC...TACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680122.1
3UTR-3UTR CAA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 3 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 3 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCA +
Preference number: 3 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPVWQTS*GGQCNP
Trigger: TGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp CAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: QKMPTPTVPSTHVTCGFGSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...GCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 3 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 3 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 3 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR TCA 72 bp CTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATaGGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGC +
Preference number: 3 (lower is better)
Translates to: LLPGGPRIYTDQ*ALHKPRGWVWS
Trigger: GCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR GCA 72 bp CGACGAGATCGGCATCAGAGCCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTCCCCGGACAATCTGGA +
Preference number: 3 (lower is better)
Translates to: RRDRHQSQSSEL*LWRLILPGQSG
Trigger: TCCAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTGGCTCTGATGCCGATCTCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR GCA 72 bp GTTGAGATCCAGAATTTCCTTAACCGAGGAGTCCCGTaGCCCCGTGGGCTGGCACCAGTTGGGCTAACTGAC +
Preference number: 3 (lower is better)
Translates to: VEIQNFLNRGVP*PRGLAPVGLTD
Trigger: GTCAGTTAGCCCAACTGGTGCCAGCCCACGGGGGCACGGGACTCCTCGGTTAAGGAAATTCTGGATCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR CCA 72 bp GTAGGGAGGGCTTTGGAGAGGTGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCACGTCCACAGTCATCTT +
Preference number: 3 (lower is better)
Translates to: VGRALERCGRHP*VASATHVHSHL
Trigger: AAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCCCTCCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 3 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 3 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACTTCAGAGCTGTGCCTTaGGCGGTTGATCCTCCCCGG +
Preference number: 3 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYFRAVP*AVDPPR
Trigger: CCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAA...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CAA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGGCAGGAGAACCAGCTaGAACCCGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPGRRTS*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAGCTGGTTCTCCTGCC...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680122.1
3UTR CCA 72 bp GATCGGCATCAGAGCCAGTCTTCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCCGGACAATCTGGATCTTGG +
Preference number: 3 (lower is better)
Translates to: DRHQSQSSELCL*RLILPGQSGSW
Trigger: CCAAGATCCAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTGGCTCTGATGCCGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CAA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 3 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR GCA 72 bp CGACGAGATCGGCATCAGAGCCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTCCCTAAGGAAGAAAGG +
Preference number: 3 (lower is better)
Translates to: RRDRHQSQSSEL*LWRLILPKEER
Trigger: CCTTTCTTCCTTAGGGAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTGGCTCTGATGCCGATCTCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR-3UTR CAA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 3 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp GACACCCAGCAATGCTTACTCAGAGCGTTGAAGGCGGCCAGCACCTCGAAAGAGATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 3 (lower is better)
Translates to: DTQQCLLRALKAASTSKEIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...CTCTTTCGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGCATTGCTGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR CAA 90 bp CCTACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCTGCTTACTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 3 (lower is better)
Translates to: PTLVPITEFRPIKGGQLFCLLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGCA...GAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR CCA 72 bp GGCTGGAGAAACTCCTTGATGAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGTGGTGCAGGCAGAACA +
Preference number: 3 (lower is better)
Translates to: GWRNSLMNLSRR*PGVVKSGAGRT
Trigger: TGTTCTGCCTGCACCACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTTCATCAAGGAGTTTCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CAA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 3 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCA +
Preference number: 3 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLVWQTS*GGQCNP
Trigger: TGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp AGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCGAGCTAACCCCACGGTaGGCTTGGCCACCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: SLKTLLIVTTGWHLLGTGELTPR*AWPPLP
Trigger: GGGAAGAGGTGGCCAAGCCAACCGTGGGGTTAGCTC...GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCTTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 3 (lower is better)
Translates to: GRHPWVASATHVHSHLCSFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 3 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 3 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 3 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGEGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGCTGTGCCTTTGGCGGTaGATCCTCCCTAAGGAAGAA +
Preference number: 3 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGLCLWR*ILPKEE
Trigger: TTCTTCCTTAGGGAGGATCAACCGCCAAAGGCACAG...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680514.1
3UTR TCA 72 bp CTAACCAACACTGACTCTGGTCAAAACCTGCAAGCATaGTCTGCGGACCAGCAGCTCATCATGGAGCTGGCT +
Preference number: 3 (lower is better)
Translates to: LTNTDSGQNLQA*SADQQLIMELA
Trigger: AGCCAGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAGTCAGTGTTGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR TCA 72 bp TCTCTCCTGACACCCAGCAATGCTTACTCAGAGCGTTaGAGGCGGCCAGCACCTCGAAAGAGATTCTCTGAT +
Preference number: 3 (lower is better)
Translates to: SLLTPSNAYSER*RRPAPRKRFSD
Trigger: ATCAGAGAATCTCTTTCGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGCATTGCTGGGTGTCAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR GCA 72 bp GACCTTTGGGTATCTTTTCCTTCTTCCTGCTTGGATTaGAAACCTGCCATCTGGAGGCACCGTGGCCGCTTT +
Preference number: 3 (lower is better)
Translates to: DLWVSFPSSCLD*KPAIWRHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGATACCCAAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR GCA 72 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTaGTCAACATCCTACAATGCACAAGAGAGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: TGWHLLGTGQRC*STSYNAQESLQ
Trigger: TTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCATCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCA +
Preference number: 3 (lower is better)
Translates to: ILVEYIRYILVGREGFGEVWQTS*GGQCNP
Trigger: TGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAAACCCCACGGTTGGCTaGGCCACCTCTTCCCTACAT +
Preference number: 3 (lower is better)
Translates to: GAENSNALTTCLVFLAWPNPTVG*ATSSLH
Trigger: ATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGTT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAAACCCCACGGTTGGCTaGGCCACCTCTTCCCTACAT +
Preference number: 3 (lower is better)
Translates to: RPEMLLNILQCTREPPNKNPTVG*ATSSLH
Trigger: ATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGTT...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACCGGACAATCTGGATCTaGGCTGTTGATTGTCGGAAG +
Preference number: 3 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYRTIWI*AVDCRK
Trigger: CTTCCGACAATCAACAGCCAAGATCCAGATTGTCCG...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CAA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCGTTCTAATGAAAGGGTaGGCTGGCTGCTGGCATAGA +
Preference number: 3 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRAVLMKG*AGCWHR
Trigger: TCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAAC...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCTTTAACCACATGCTaGGTCTTTCTGGCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNALTTC*VFLAWP
Trigger: TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGC...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AGACTAGGGATGCTGCGCAGCACCCTACAGTGCATGAATCTGGGGTTACCTGCCAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 3 (lower is better)
Translates to: RLGMLRSTLQCMNLGLPASRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...GGCAGGTAACCCCAGATTCATGCACTGTAGGGTGCTGCGCAGCATCCCTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACTCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: QDVDELEAPRARSQSYENSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGAACCCCACGGTTGGCTaGGCCACCTCTTCCCTACAT +
Preference number: 3 (lower is better)
Translates to: SLAMLKLNSISSPITSLENPTVG*ATSSLH
Trigger: ATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGTT...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 3 (lower is better)
Translates to: LQDCETGRKLSSREVRGFIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTTTCCTCTGGTTTCCATaGTTTTTGTCCCTTGCTGGT +
Preference number: 3 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCFLWFP*FLSLAG
Trigger: ACCAGCAAGGGACAAAAACAATGGAAACCAGAGGAA...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR CAA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTTCAGAGCTGTGCCTTaGGCGGTTGATCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: RRSSLIQACYRAISRQRLFRAVP*AVDPPC
Trigger: GCAGGGAGGATCAACCGCCAAAGGCACAGCTCTGAA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680138.1
3UTR CCA 72 bp GAGCTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTaGCATAGAGGATGTCTGTGTCAGCAGGGGCAGAAA +
Preference number: 3 (lower is better)
Translates to: ELEVLMKGLAGC*HRGCLCQQGQK
Trigger: TTTCTGCCCCTGCTGACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR CCA 72 bp GCTGGGTCCAAGATCACAGGCCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTCACGGTCTCATCTTCA +
Preference number: 3 (lower is better)
Translates to: AGSKITGLVFCN*LSRNFLTVSSS
Trigger: TGAAGATGAGACCGTGAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGGACCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp GGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCTTTCCTTCTTCCTGCTaGGATTGCAAACCTGCCATC +
Preference number: 3 (lower is better)
Translates to: GRKLSSREVRGFIQINEPFPSSC*DCKPAI
Trigger: GATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAA...GGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTTATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 3 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCAACCCCACGGTTGGCTaGGCCACCTCTTCCCTACAT +
Preference number: 3 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFNPTVG*ATSSLH
Trigger: ATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGTT...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAAGAGCTAACCCCACGGTaGGCTTGGCCACCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQELTPR*AWPPLP
Trigger: GGGAAGAGGTGGCCAAGCCAACCGTGGGGTTAGCTC...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATGAAATCCTGGGCTGCACCCCCTCAAGCTTaGATAGTTATCTATGGAAGG +
Preference number: 3 (lower is better)
Translates to: SADQQLIMELARNMKSWAAPPQA*IVIYGR
Trigger: CCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGC...AGCCCAGGATTTCATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CAA 90 bp TCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATGAAATCCTGGGCTAGAGTGTGGGAATGTTaGCTGAGACAGGAGACACAA +
Preference number: 3 (lower is better)
Translates to: SADQQLIMELARNMKSWARVWEC*LRQETQ
Trigger: TTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCT...AGCCCAGGATTTCATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CAA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCTTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 3 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680122.1
3UTR GCA 72 bp GGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATaGACAAGAGAGCCTCCAAACAAAGAACTGTCTAGC +
Preference number: 3 (lower is better)
Translates to: GYRPEMLLNILQ*TREPPNKELSS
Trigger: GCTAGACAGTTCTTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR GCA 72 bp GATTTTGACCTGGTAGGAAGGCAGACTTCAAATGCTTaGCCCAGCTGGACTTTTCCCAGATGTCTGCCTCAT +
Preference number: 3 (lower is better)
Translates to: DFDLVGRQTSNA*PSWTFPRCLPH
Trigger: ATGAGGCAGACATCTGGGAAAAGTCCAGCTGGGGCAAGCATTTGAAGTCTGCCTTCCTACCAGGTCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR CCA 72 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: PPLDDFYRHFPR*YWVSSPILEAG
Trigger: CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 3 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 3 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp CCTACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAGAGTGTGGGAATGTTaGCTGAGACAGGAGACACAA +
Preference number: 3 (lower is better)
Translates to: PTLVPITEFRPIKGGQLFRVWEC*LRQETQ
Trigger: TTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCT...GAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CAA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACTTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 3 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 3 (lower is better)
Translates to: KAERSVNPGERLTMSEDFAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAAGCTTCTCCTGGCATTaGATCAGCTCCAGTACGGTT +
Preference number: 3 (lower is better)
Translates to: RPEMLLNILQCTREPPNKSFSWH*ISSSTV
Trigger: AACCGTACTGGAGCTGATCAAATGCCAGGAGAAGCT...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CAA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACTGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 3 (lower is better)
Translates to: YRPEMLLNILQCTREPPNCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAATGGTTTCCATTGTTTTaGTCCCTTGCTGGTGGCCCT +
Preference number: 3 (lower is better)
Translates to: RPEMLLNILQCTREPPNKWFPLF*SLAGGP
Trigger: AGGGCCACCAGCAAGGGACAAAAACAATGGAAACCA...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR TCA 72 bp CAGATGTCTGCCTCATCCTCTTACTCTAACCAACACTaGCTCTGGTCAAAACCTGCAAGCATGATCTGCGGA +
Preference number: 3 (lower is better)
Translates to: QMSASSSYSNQH*LWSKPASMICG
Trigger: TCCGCAGATCATGCTTGCAGGTTTTGACCAGAGTCAGTGTTGGTTAGAGTAAGAGGATGAGGCAGACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR GCA 72 bp TGGGATGGGGCTGAAAATTCCAATGCTTTAACCACATaGTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: WDGAENSNALTT*LVFLAWPTPSL
Trigger: CAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCCATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR CCA 72 bp TCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTaGCCAACTCCTTCCTTGAAACTAAGGGCCCACCAT +
Preference number: 3 (lower is better)
Translates to: SNALTTCLVFLA*PTPSLKLRAHH
Trigger: ATGGTGGGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR CCA 72 bp CTAGGTTTTATCCCTGGAGACTGTGACAGGTTCTGTTaGCTAGCACTTTCCCCCGTCATGCAAGGAATGAAT +
Preference number: 3 (lower is better)
Translates to: LGFIPGDCDRFC*LALSPVMQGMN
Trigger: ATTCATTCCTTGCATGACGGGGGAAAGTGCTAGCCAACAGAACCTGTCACAGTCTCCAGGGATAAAACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR-3UTR CAA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 3 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCGTTCTAATGAAAGGGTaGGCTGGCTGCTGGCATAGA +
Preference number: 3 (lower is better)
Translates to: SLKTLLIVTTGWHLLGTGVLMKG*AGCWHR
Trigger: TCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAAC...GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCCTGGCCATGTTAAAATaGAACTCAATTTCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPLAMLK*NSISSP
Trigger: GGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAG...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CAA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 3 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGTTTCCTTCTTCCTGCTaGGATTGCAAACCTGCCATC +
Preference number: 3 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLFPSSC*DCKPAI
Trigger: GATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAA...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTTTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 3 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAATCTAGGAAGCATTTGTaGGGCTGGAGAAACTCCTTG +
Preference number: 3 (lower is better)
Translates to: DFYRHFPRWYWVSSPILESRKHL*GWRNSL
Trigger: CAAGGAGTTTCTCCAGCCCAACAAATGCTTCCTAGA...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CAA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGTGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 3 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 3 (lower is better)
Translates to: QDVDELEAPRARSQSYENVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTGTTCTAATGAAAGGGTaGGCTGGCTGCTGGCATAGA +
Preference number: 3 (lower is better)
Translates to: AENSNALTTCLVFLAWPTVLMKG*AGCWHR
Trigger: TCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAAC...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCGAAACTCTAGAATTTTaGAAGCTGTGTGCTAGGAAC +
Preference number: 3 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRAETLEF*KLCARN
Trigger: GTTCCTAGCACACAGCTTCAAAAATTCTAGAGTTTC...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGTCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: KSLAMLKLNSISSPITSLSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 3 (lower is better)
Translates to: RRSSLIQACYRAISRQRLFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTTTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 3 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 3 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
3UTR TCA 72 bp GTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCCAAGGTGGTATTGGGT +
Preference number: 3 (lower is better)
Translates to: VTGLFPDNASFR*LLPALSKVVLG
Trigger: ACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR TCA 72 bp CACCAGGACTGGCATTTGTCTTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGGGGCTGGGATTATCAT +
Preference number: 3 (lower is better)
Translates to: HQDWHLSYPRIF*ALDRSRGWDYH
Trigger: ATGATAATCCCAGCCCCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATAAGACAAATGCCAGTCCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR CCA 72 bp GAAAGGGTTTTGTATACAGAGGAAACAGACAGGACGTaGATGAGTTGGAAGCACCGAGAGCAAGATCACAGA +
Preference number: 3 (lower is better)
Translates to: ERVLYTEETDRT*MSWKHREQDHR
Trigger: TCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTTTCCTCTGTATACAAAACCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: YIGMSANQEAPQASLSRVKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CAA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 3 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGCTTTAACCACATGCTaGGTCTTTCTGGCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDALTTC*VFLAWP
Trigger: TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGC...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCATATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 3 (lower is better)
Translates to: GAENSNALTTCLVFLAWPYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTGATGAGAACATCTCATaGACAATAGGATGGATCCTA +
Preference number: 3 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASDENIS*TIGWIL
Trigger: TAGGATCCATCCTATTGTCAATGAGATGTTCTCATC...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGGCACCCCCTCAAGCTTaGATAGTTATCTATGGAAGG +
Preference number: 3 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKAPPQA*IVIYGR
Trigger: CCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGC...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR-3UTR CAA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 3 (lower is better)
Translates to: GCYSRRSSLIQACYRAISIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp AAGAGTGTGGGAATGTTTGCTGAGACAGGAGACACAAGAGGTGGGCAGGTCTTATTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 3 (lower is better)
Translates to: KSVGMFAETGDTRGGQVLFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...TAAGACCTGCCCACCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR CAA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGCACTCACATTATTGGTaGGGTCAACTGGATCCAAGA +
Preference number: 3 (lower is better)
Translates to: KERTWWREPSISGGRISWHSHYW*GQLDPR
Trigger: TCTTGGATCCAGTTGACCCAACCAATAATGTGAGTG...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CAA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATCATTGTTTTTGTCCCTaGCTGGTGGCCCTAAGCAGA +
Preference number: 3 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDHCFCP*LVALSR
Trigger: TCTGCTTAGGGCCACCAGCAAGGGACAAAAACAATG...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR TCA 72 bp TGTAAACAGACTGCAACCTACTCTTGTGCCAATCACTaGGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAA +
Preference number: 3 (lower is better)
Translates to: CKQTATYSCANH*VSANQRWPTVQ
Trigger: TTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGGTTGCAGTCTGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR GCA 72 bp AGGAATGTACGGATGATGTTAACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTGGGCTGGAGAAACTCC +
Preference number: 3 (lower is better)
Translates to: RNVRMMLTALSI*SRKHLLGWRNS
Trigger: GGAGTTTCTCCAGCCCAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGTTAACATCATCCGTACATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR CCA 72 bp GTGAACACCTGGATGGTGAACCCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTCAACCACTTCGTGAAC +
Preference number: 3 (lower is better)
Translates to: VNTWMVNPSRDF*ISKLFFNHFVN
Trigger: GTTCACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCACCATCCAGGTGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR CAA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: RPEMLLNILQCTREPPNKKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: DFYRHFPRWYWVSSPILEKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 3 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 3 (lower is better)
Translates to: GAENSNALTTCLVFLAWPKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 3 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAAACTCTAGAATTTTaGAAGCTGTGTGCTAGGAAC +
Preference number: 3 (lower is better)
Translates to: NRQDVDELEAPRARSQSYETLEF*KLCARN
Trigger: GTTCCTAGCACACAGCTTCAAAAATTCTAGAGTTTC...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTGGCCATGTTAAAATaGAACTCAATTTCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFLAMLK*NSISSP
Trigger: GGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAG...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTAAAATCACTGTGTTCTaGACCTTTGGGTATCTTTTC +
Preference number: 3 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFKITVF*TFGYLF
Trigger: GAAAAGATACCCAAAGGTCAAGAACACAGTGATTTT...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
3UTR-3UTR CAA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 3 (lower is better)
Translates to: RRSSLIQACYRAISRQRLYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR TCA 72 bp TATGACAACAGTTATAATCTGAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCA +
Preference number: 3 (lower is better)
Translates to: YDNSYNLSLWRA*SSNERVGWLLA
Trigger: TGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR CCA 72 bp ATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTaGGTGGCATCTACTGGGTACAGGCCAGAGATGCTG +
Preference number: 3 (lower is better)
Translates to: MIKSQDTFNCHN*VASTGYRPEML
Trigger: CAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 3 (lower is better)
Translates to: LEAPRARSQSYENQGESKSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAATATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 3 (lower is better)
Translates to: LEAPRARSQSYENQGESKYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR TCA 72 bp CCAGTTTTATCGAGGATGTCACGTTGGCTTCTCTTCTaGTCCTGGAATTGTTTTAAGTCACTGAAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: PVLSRMSRWLLF*SWNCFKSLKKR
Trigger: CCTCTTCTTCAGTGACTTAAAACAATTCCAGGATCAGAAGAGAAGCCAACGTGACATCCTCGATAAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR-3UTR CAA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 3 (lower is better)
Translates to: KSLAMLKLNSISSPITSLVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 3 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGAAACTCTAGAATTTTaGAAGCTGTGTGCTAGGAAC +
Preference number: 3 (lower is better)
Translates to: LEAPRARSQSYENQGESKETLEF*KLCARN
Trigger: GTTCCTAGCACACAGCTTCAAAAATTCTAGAGTTTC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTCAGCAATGTCAAAGTaGTCTTTTCTGCACCCCTGT +
Preference number: 3 (lower is better)
Translates to: VSELISGCYSRRSSLIQASAMSK*SFLHPC
Trigger: ACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGA...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
3UTR-3UTR CAA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 3 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: KSLAMLKLNSISSPITSLKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAAGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 3 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 3 (lower is better)
Translates to: KSLAMLKLNSISSPITSLKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAAACTCTAGAATTTTaGAAGCTGTGTGCTAGGAAC +
Preference number: 3 (lower is better)
Translates to: KSLAMLKLNSISSPITSLETLEF*KLCARN
Trigger: GTTCCTAGCACACAGCTTCAAAAATTCTAGAGTTTC...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 3 (lower is better)
Translates to: VSELISGCYSRRSSLIQASRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR-3UTR CAA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGTTTCCTTCTTCCTGCTaGGATTGCAAACCTGCCATC +
Preference number: 3 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEFPSSC*DCKPAI
Trigger: GATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAA...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGAAAATCACTGTGTTCTaGACCTTTGGGTATCTTTTC +
Preference number: 3 (lower is better)
Translates to: KSLAMLKLNSISSPITSLKITVF*TFGYLF
Trigger: GAAAAGATACCCAAAGGTCAAGAACACAGTGATTTT...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
3UTR CCA 72 bp ATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTaGTGTCTGCATTGTCTAAAAAGAAAAACATACGTG +
Preference number: 3 (lower is better)
Translates to: IDNRMDPSSTTS*CLHCLKRKTYV
Trigger: CACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR-3UTR CAA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGAAAATCACTGTGTTCTaGACCTTTGGGTATCTTTTC +
Preference number: 3 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLKITVF*TFGYLF
Trigger: GAAAAGATACCCAAAGGTCAAGAACACAGTGATTTT...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
3UTR TCA 72 bp TTGCGGATGAAACTTCTAATAAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCCTTCTTCCTGCTTGGA +
Preference number: 3 (lower is better)
Translates to: LRMKLLIKSLCS*PLGIFSFFLLG
Trigger: TCCAAGCAGGAAGAAGGAAAAGATACCCAAAGGTCAAGAACACAGTGATTTTATTAGAAGTTTCATCCGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR TCA 72 bp CAACAGCCTCATATAAATATGACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAAGTTCTAATGAAAGGG +
Preference number: 3 (lower is better)
Translates to: QQPHINMTTVII*AFGELEVLMKG
Trigger: CCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGTCATATTTATATGAGGCTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGGGTGGCCTGGGGTCGTaGAGAGTGGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGGGLGS*RVVQAE
Trigger: TTCTGCCTGCACCACTCTTCACGACCCCAGGCCACC...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCCCTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGPMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGG...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVNQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCGATTACTGGCCTCGCTaGTTGGAGCTGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGDYWPR*LELVQQ
Trigger: CTGCTGCACCAGCTCCAATCAGCGAGGCCAGTAATC...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTCCCGTGCCCCCGTGGGCTGGCACCAGTTGGGCTAACTGACACTGTTTCCAAGCCTCGGGGCTGGGTGTaGAGCCAGAACTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VPCPRGLAPVGLTDTVSKPRGWV*SQNSAD
Trigger: GTCAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGG...CTTGGAAACAGTGTCAGTTAGCCCAACTGGTGCCAGCCCACGGGGGCACGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR TCA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCCCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 4 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATGCAGGAGAACCAGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TPTVPSTHVTCGFGWVQDAGEPA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCTGGTTCTCCTGC...ATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR GCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGSLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGATCCAGAAGGTGGCCTaGGGTCGTGAAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGIQKVA*GREEWC
Trigger: GCACCACTCTTCACGACCCCAGGCCACCTTCTGGAT...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGCACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGTGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCAAAGGGTTGGCTGGCTaGTGGCATAGAGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVKGLAG*WHRGCL
Trigger: CAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTT...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTCATAGGAGCCACCTATaGCCACTCCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGHRSHL*PLPAPG
Trigger: CCCTGGTGCAGGGAGTGGCCATAGGTGGCTCCTATG...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
3UTR CAA 72 bp GGTAGGGAGGGCTTTGGAGAGGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCACGTCCACAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GREGFGEVWQTS*GGQCNPRPQSS
Trigger: AGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCCCTCCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: INEPCINLGAGCGARTQLNQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 4 (lower is better)
Translates to: TPTVPSTHVTCGFGWVQDFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...ATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCGGGTACCATCGGAGTTaGCTCTTAAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGGYHRS*LLRLFS
Trigger: GGAAAACAGTCTTAAGAGGCAACTCCGATGGTACCC...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGCTGATTGGAGCTGGTaGAGCAGGATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLADWSW*SRMFLM
Trigger: CATCAGGAACATCCTGCTGCACCAGCTCCAATCAGC...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCGGTCGTGAAGAGTGGTaGAGGCAGAACATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVGREEW*RQNIPR
Trigger: TCTTGGAATGTTCTGCCTGCACCACTCTTCACGACC...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGNLSRR*PGVVKS
Trigger: ACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTT...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTAGAAGCTCAGCACCCTaGGAGCCTTCCACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGRSSAP*EPSTWE
Trigger: CTCCCAAGTGGAAGGCTCCCAGGGTGCTGAGCTTCT...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCGCCCCATCACCTCCTTaGAGATTGGGGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GRHPWVASATHVHSHLCSAPSPP*RLGVGW
Trigger: CCATCCCACCCCCAATCTCCAAGGAGGTGATGGGGC...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: TPTVPSTHVTCGFGWVQDTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...ATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCGGCTTTGGAGAGGTGTaGCAGACATCCTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPGFGEV*QTSLGG
Trigger: GCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCC...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTCTGCCGGCAAGACAGTaGATGGTAGGATGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPLPARQ*MVGWEA
Trigger: TGCCTCCCATCCTACCATTCACTGTCTTGCCGGCAG...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR TCA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCGTGAAGAGTGGTaGAGGCAGAACATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLGREEW*RQNIPR
Trigger: TCTTGGAATGTTCTGCCTGCACCACTCTTCACGACC...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCACAGGCCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVTGLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGT...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGACTGGCCTCGCTGATTaGAGCTGGTGCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLTGLAD*SWCSRM
Trigger: CATCCTGCTGCACCAGCTCCAATCAGCGAGGCCAGT...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCATCCAGAAGGTGGCCTaGGGTCGTGAAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPIQKVA*GREEWC
Trigger: GCACCACTCTTCACGACCCCAGGCCACCTTCTGGAT...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACCCTCGGGGCTGGGTGTaGAGCCAGAACTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYPRGWV*SQNSAD
Trigger: GTCAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGG...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTCACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGCCCCATCACCTCCTTaGAGATTGGGGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCAPSPP*RLGVGW
Trigger: CCATCCCACCCCCAATCTCCAAGGAGGTGATGGGGC...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCTGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: GRHPWVASATHVHSHLCSCGRHP*VASATH
Trigger: GTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACA...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGYPRIF*ALDRSR
Trigger: CCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATA...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCTGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAAGTACGGGGCTAGGGTaGAGGCACCTGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVSTGLG*RHLVFC
Trigger: GCAGAAAACCAGGTGCCTTCACCCTAGCCCCGTACT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCTGCGTTAGGGTTCAGTaGGGGCTGAGTCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPCVRVQ*GLSPKQ
Trigger: TTGCTTTGGACTCAGCCCTCACTGAACCCTAACGCA...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR GCA 90 bp CAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGTTGCTCTCAGCTGGCTaGCGGCAAGACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: QDCPETFCSVKIRHSTPLLLSAG*RQDSEW
Trigger: CCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAA...CAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGNCSGS*RTSQMV
Trigger: CACCATCTGTGACGTCCTGCAGGAACCCGAACAGTT...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCCTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTPMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGG...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGCCTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGEPMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGG...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTCAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR GCA 90 bp CAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 4 (lower is better)
Translates to: QKMPTPTVPSTHVTCGFGTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...GCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTCTGGTCAAAACCTGCAAGCATGATCTGCGGACCAGCAGCTCATCATGGAGCTCATAGGAGCCACCTATaGCCACTCCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LWSKPASMICGPAAHHGAHRSHL*PLPAPG
Trigger: CCCTGGTGCAGGGAGTGGCCATAGGTGGCTCCTATG...AGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449768.2
CDS-3UTR CCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGCTCGCTGATTGGAGCTaGTGCAGCAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLLADWS*CSRMFL
Trigger: CAGGAACATCCTGCTGCACCAGCTCCAATCAGCGAG...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCCTCGCTGATTGGAGCTaGTGCAGCAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GRHPWVASATHVHSHLCSLADWS*CSRMFL
Trigger: CAGGAACATCCTGCTGCACCAGCTCCAATCAGCGAG...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTATCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVSELCL*RLILPG
Trigger: TCCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCCGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCGGGTTGGCTGGCTGCTaGCATAGAGGATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPGLAGC*HRGCLC
Trigger: ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCC...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGGCAGACATCCTTGGGTaGCCAGTGCAACCCACGTCC +
Preference number: 4 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGADILG*PVQPTS
Trigger: GGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGC...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGATGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: VSLQDCETGRKLSSREVRCGRHP*VASATH
Trigger: GTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACA...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCTGCTGGAGTTCAGTaGAGCAGACTGCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGSAGVQ*SRLQTH
Trigger: GTGAGTTTGCAGTCTGCTTCACTGAACTCCAGCAGA...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCTCTGCTGGAGTTCAGTaGAGCAGACTGCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPSAGVQ*SRLQTH
Trigger: GTGAGTTTGCAGTCTGCTTCACTGAACTCCAGCAGA...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCTTTTTCTGGCACTGTTaGTGCCAGTGCTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVFFWHC*CQCFIK
Trigger: CTTGATAAAGCACTGGCATCAACAGTGCCAGAAAAA...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGGATTACTGGCCTCGCTaGTTGGAGCTGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGDYWPR*LELVQQ
Trigger: CTGCTGCACCAGCTCCAATCAGCGAGGCCAGTAATC...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGATGTGCCTTTGGCGGTTaGTCCTCCCCGGACAATCTG +
Preference number: 4 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGCAFGG*SSPDNL
Trigger: CAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACA...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 4 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 4 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNAQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAAGTGGGAGGATCACTTaGGGGCCAGGAGTTCGAGAA +
Preference number: 4 (lower is better)
Translates to: VSLQDCETGRKLSSREVRSGRIT*GPGVRE
Trigger: TTCTCGAACTCCTGGCCCTCAAGTGATCCTCCCACT...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR TCA 90 bp TTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGCGTGGGTTTGGAGGTGCTaGCTGGATCGGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FSKDNQGMGEKLVPEKRAWVWRC*LDRGPR
Trigger: CCTGGGCCCCCGATCCAGTCAGCACCTCCAAACCCA...CGCTCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR GCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTACAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCTGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPCPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCTTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AGACTAGGGATGCTGCGCAGCACCCTACAGTGCATGAATCTGGGGTTACCTGCCAAAGGGTTGGCTGGCTaGTGGCATAGAGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: RLGMLRSTLQCMNLGLPAKGLAG*WHRGCL
Trigger: CAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTT...GGCAGGTAACCCCAGATTCATGCACTGTAGGGTGCTGCGCAGCATCCCTAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCATCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNASLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTAACCGAGGAGTCCCGTaGCCCCGTGGGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSNRGVP*PRGLAP
Trigger: TGGTGCCAGCCCACGGGGGCACGGGACTCCTCGGTT...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR CCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGGCACCGAGGACAGCTaGGACTCCCCATTTCCCATT +
Preference number: 4 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGEGTEDS*DSPFPI
Trigger: AATGGGAAATGGGGAGTCCCAGCTGTCCTCGGTGCC...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACATAGGAGCCACCTATaGCCACTCCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPHRSHL*PLPAPG
Trigger: CCCTGGTGCAGGGAGTGGCCATAGGTGGCTCCTATG...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTCCCGTGCCCCCGTGGGCTGGCACCAGTTGGGCTAACTGACACTGTTTCCAAGATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPCPRGLAPVGLTDTVSKIGWVN*IQDYWP
Trigger: AGGCCAGTAATCTTGGATCCAGTTGACCCAACCAAT...CTTGGAAACAGTGTCAGTTAGCCCAACTGGTGCCAGCCCACGGGGGCACGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR CCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGTGGGGTCGTGAAGAGTaGTGCAGGCAGAACATTCCA +
Preference number: 4 (lower is better)
Translates to: INEPCINLGAGCGARTQLWGREE*CRQNIP
Trigger: TGGAATGTTCTGCCTGCACCACTCTTCACGACCCCA...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCAATCCAGAAGGTGGCCTaGGGTCGTGAAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNAIQKVA*GREEWC
Trigger: GCACCACTCTTCACGACCCCAGGCCACCTTCTGGAT...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCATCCAGAAGGTGGCCTaGGGTCGTGAAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTIQKVA*GREEWC
Trigger: GCACCACTCTTCACGACCCCAGGCCACCTTCTGGAT...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTATCCAGAAGGTGGCCTaGGGTCGTGAAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: IQINEPCINLGAGCGARTIQKVA*GREEWC
Trigger: GCACCACTCTTCACGACCCCAGGCCACCTTCTGGAT...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVNLSRR*PGVVKS
Trigger: ACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTT...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCCTCCCCGGACAATCTaGATCTTGGCTGTTGATTGT +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVPPRTI*ILAVDC
Trigger: ACAATCAACAGCCAAGATCCAGATTGTCCGGGGAGG...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGTCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGESELCL*RLILPG
Trigger: TCCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCCCTCGGGGCTGGGTGTaGAGCCAGAACTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPPRGWV*SQNSAD
Trigger: GTCAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGG...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGCTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGGGTTGGCTGGCTGCTaGCATAGAGGATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVGLAGC*HRGCLC
Trigger: ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCC...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACACCTCCTTGGAGATTaGGGGTGGGATGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNAHLLGD*GWDGAE
Trigger: TTCAGCCCCATCCCACCCCCAATCTCCAAGGAGGTG...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCGGAGGGAGGATATCCTaGTGGAATATATCAGGTATA +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVGGRIS*WNISGI
Trigger: TATACCTGATATATTCCACCAGGATATCCTCCCTCC...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTTGCACAGAGCTGTCTGGCACCCGCTTCTTTGGCTTTTCTCTCCTGACACCCTTGCACAGAGCTGTCTaGCACCCGCTTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GCTELSGTRFFGFSLLTPLHRAV*HPLLWL
Trigger: AAGCCAAAGAAGCGGGTGCCAGACAGCTCTGTGCAA...GGGTGTCAGGAGAGAAAAGCCAAAGAAGCGGGTGCCAGACAGCTCTGTGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGAGTCCCGTGCCCCCGTaGGCTGGCACCAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQSPVPP*AGTSWA
Trigger: AGCCCAACTGGTGCCAGCCCACGGGGGCACGGGACT...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: VDELEAPRARSQSYENQGNQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFNQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTAAGCTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSLSSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAA...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATTAAGCTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: IVTTGWHLLGTGQRCCSTLSSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAA...TGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGCTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCGCTCCAGTACGGTTCTaGCGCCTTCAGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: SSRTVRKPSAVSKSGTPLAPVRF*RLQQCQ
Trigger: TTGACATTGCTGAAGGCGTCAGAACCGTACTGGAGC...GAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCTTCTCCTGGCATTTaGTCAGCTCCAGTACGGTTC +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVASPGI*SAPVRF
Trigger: GAACCGTACTGGAGCTGATCAAATGCCAGGAGAAGC...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGGTGGCCTGGGGTCGTaGAGAGTGGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYGGLGS*RVVQAE
Trigger: TTCTGCCTGCACCACTCTTCACGACCCCAGGCCACC...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCCTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPLDLGC*LSEAVF
Trigger: GAAAACTGCTTCCGACAATCAACAGCCAAGATCCAG...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGACCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 4 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCCAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGCTAACACCTCTTAGATaGAAGCAGCTCAGGGACGTG +
Preference number: 4 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLLTPLR*KQLRDV
Trigger: CACGTCCCTGAGCTGCTTTCATCTAAGAGGTGTTAG...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCGCAGGAGAACCAGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVAGEPA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCTGGTTCTCCTGC...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680122.1
CDS-3UTR GCA 90 bp CTCTGGTCAAAACCTGCAAGCATGATCTGCGGACCAGCAGCTCATCATGGAGCTCCTCTCTCCACCCACTaGAGCGAGCTTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: LWSKPASMICGPAAHHGAPLSTH*SELTNS
Trigger: AGAGTTGGTAAGCTCGCTGCAGTGGGTGGAGAGAGG...AGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR GCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCCTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVPMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGG...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR GCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCTTCAGTGAAGCAGACTaGAAACTCACCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GRHPWVASATHVHSHLCSFSEAD*KLTRTG
Trigger: GCCAGTCCTGGTGAGTTTGCAGTCTGCTTCACTGAA...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCGGTCGTGAAGAGTGGTaGAGGCAGAACATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPGREEW*RQNIPR
Trigger: TCTTGGAATGTTCTGCCTGCACCACTCTTCACGACC...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTTGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPCPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR GCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTACAGGCCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVTGLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGT...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCAAAGGGTTGGCTGGCTaGTGGCATAGAGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSKGLAG*WHRGCL
Trigger: CAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTT...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGGCACCGAGGACAGCTaGGACTCCCCATTTCCCATT +
Preference number: 4 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPGTEDS*DSPFPI
Trigger: AATGGGAAATGGGGAGTCCCAGCTGTCCTCGGTGCC...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TATCTATCCCACTCATGGCCTAGAGGTTGCACAGAGCTGTCTGGCACCCGCTTCGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: YLSHSWPRGCTELSGTRFAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...GAAGCGGGTGCCAGACAGCTCTGTGCAACCTCTAGGCCATGAGTGGGATAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGCATAGGAGCCACCTATaGCCACTCCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VDELEAPRARSQSYENQGHRSHL*PLPAPG
Trigger: CCCTGGTGCAGGGAGTGGCCATAGGTGGCTCCTATG...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACATAGGAGCCACCTATaGCCACTCCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: NHSFASFARRCQHQRSPPHRSHL*PLPAPG
Trigger: CCCTGGTGCAGGGAGTGGCCATAGGTGGCTCCTATG...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGCCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGPSRDF*ISKLFF
Trigger: GAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGG...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAATCCAGAAGGTGGCCTaGGGTCGTGAAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPIQKVA*GREEWC
Trigger: GCACCACTCTTCACGACCCCAGGCCACCTTCTGGAT...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCGGACAATCTGGATCTTaGCTGTTGATTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPGQSGS*LLIVGS
Trigger: GCTTCCGACAATCAACAGCCAAGATCCAGATTGTCC...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCCCTCCCCGGACAATCTaGATCTTGGCTGTTGATTGT +
Preference number: 4 (lower is better)
Translates to: GRHPWVASATHVHSHLCSPPRTI*ILAVDC
Trigger: ACAATCAACAGCCAAGATCCAGATTGTCCGGGGAGG...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTCTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGTGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: RMKFRCRTVKQVENSPPGCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...CCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACGCAGACATCCTTGGGTaGCCAGTGCAACCCACGTCC +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNADILG*PVQPTS
Trigger: GGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGC...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGGCTTTGGAGAGGTGTaGCAGACATCCTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNGFGEV*QTSLGG
Trigger: GCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCC...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTCCCGTGCCCCCGTGGGCTGGCACCAGTTGGGCTAACTGACACTGTTTCCAAGTTTAATTGTCACAACTaGGTGGCATCTACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: VPCPRGLAPVGLTDTVSKFNCHN*VASTGY
Trigger: GTACCCAGTAGATGCCACCCAGTTGTGACAATTAAA...CTTGGAAACAGTGTCAGTTAGCCCAACTGGTGCCAGCCCACGGGGGCACGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR TCA 90 bp TTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGCGAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: FSKDNQGMGEKLVPEKRANQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...CGCTCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCTTCAAAGTTGTAGTTaGCCATCCAATAGATACACA +
Preference number: 4 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVLQSCS*PSNRYT
Trigger: TGTGTATCTATTGGATGGTCAACTACAACTTTGAAG...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTGCAGCAGGATGTTCCTaGTGGTCTCATCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPAAGCS*WSHLQS
Trigger: ACTTTGAAGATGAGACCATCAGGAACATCCTGCTGC...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR TCA 90 bp GACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGGATTACTGGCCTCGCTaGTTGGAGCTGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DCETGRKLSSREVRGFIQDYWPR*LELVQQ
Trigger: CTGCTGCACCAGCTCCAATCAGCGAGGCCAGTAATC...CTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTGTTCATGGATTTCCTTaGCGATTTTGTGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPVHGFP*RFCAAR
Trigger: ACGAGCGGCACAAAATCGTCAAGGAAATCCATGAAC...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAATGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACCAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTTCTGACGCCTTCAGCAATGTCAAAGTTGTCTTTTCTGCACCCCTGTTCCCAGAGTACGGGGCTAGGGTaGAGGCACCTGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VLTPSAMSKLSFLHPCSQSTGLG*RHLVFC
Trigger: GCAGAAAACCAGGTGCCTTCACCCTAGCCCCGTACT...CTGGGAACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGAAGGCGTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR TCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTGGGTTCAGTGAGGGCTaGGTCCAAAGCAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: IQINEPCINLGAGCGARTGFSEG*VQSKGF
Trigger: AAACCCTTTGCTTTGGACTCAGCCCTCACTGAACCC...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR GCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATCCTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYPMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGG...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGCGCCTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: FSKDNQGMGEKLVPEKRAPMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGG...CGCTCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449768.2
CDS-3UTR GCA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCGGGTACCATCGGAGTTaGCTCTTAAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPGYHRS*LLRLFS
Trigger: GGAAAACAGTCTTAAGAGGCAACTCCGATGGTACCC...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: IQINEPCINLGAGCGARTQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACACTTGGATTGCAAACCTaGCATCTGGAGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: IVTTGWHLLGTGQRCCSTLGLQT*HLEAPW
Trigger: CCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAG...TGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCTTGGATTGCAAACCTaGCATCTGGAGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHLGLQT*HLEAPW
Trigger: CCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAG...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTGGCACCGAGGACAGCTaGGACTCCCCATTTCCCATT +
Preference number: 4 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFGTEDS*DSPFPI
Trigger: AATGGGAAATGGGGAGTCCCAGCTGTCCTCGGTGCC...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR CCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: LQDCETGRKLSSREVRGFAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTCCCGTGCCCCCGTGGGCTGGCACCAGTTGGGCTAACTGACACTGTTTCCAAGCCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VPCPRGLAPVGLTDTVSKPSRDF*ISKLFF
Trigger: GAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGG...CTTGGAAACAGTGTCAGTTAGCCCAACTGGTGCCAGCCCACGGGGGCACGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR CCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTATACACAGCTTCTCCTaGCATTTGATCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVIHSFS*HLISSS
Trigger: ACTGGAGCTGATCAAATGCCAGGAGAAGCTGTGTAT...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCACTCGCTGATTGGAGCTaGTGCAGCAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPLADWS*CSRMFL
Trigger: CAGGAACATCCTGCTGCACCAGCTCCAATCAGCGAG...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTACTGGCCTCGCTGATTaGAGCTGGTGCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCTGLAD*SWCSRM
Trigger: CATCCTGCTGCACCAGCTCCAATCAGCGAGGCCAGT...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACACTGGCCTCGCTGATTaGAGCTGGTGCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDTGLAD*SWCSRM
Trigger: CATCCTGCTGCACCAGCTCCAATCAGCGAGGCCAGT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTCCTCCCCGGACAATCTaGATCTTGGCTGTTGATTGT +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCPPRTI*ILAVDC
Trigger: ACAATCAACAGCCAAGATCCAGATTGTCCGGGGAGG...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp CGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGCATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: RMKFRCRTVKQVENSPPGHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...CCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTCCAAGATCACAGGCCTaGTTTTCTGCAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCPRSQA*FSATGS
Trigger: TGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGG...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGACACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTGGGCCGGGAGCGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GGPGANEVSLQDCETGRKRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...TTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCRTWMS*KHREQD
Trigger: ATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCT...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GTTCTGACGCCTTCAGCAATGTCAAAGTTGTCTTTTCTGCACCCCTGTTCCCAGTGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VLTPSAMSKLSFLHPCSQCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...CTGGGAACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGAAGGCGTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR CCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGTGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VDELEAPRARSQSYENQGCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACGCAGACATCCTTGGGTaGCCAGTGCAACCCACGTCC +
Preference number: 4 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHADILG*PVQPTS
Trigger: GGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGC...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACTGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDCGRHP*VASATH
Trigger: GTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACA...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTTGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFCGRHP*VASATH
Trigger: GTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACA...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GACACCCAGCAATGCTTACTCAGAGCGTTGAAGGCGGCCAGCACCTCGAAAGAGAGGAGACACAAGAGGTaGGCAGGTCTTAGGGATTTA +
Preference number: 4 (lower is better)
Translates to: DTQQCLLRALKAASTSKERRHKR*AGLRDL
Trigger: TAAATCCCTAAGACCTGCCCACCTCTTGTGTCTCCT...CTCTTTCGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGCATTGCTGGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CCA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTTATCATTTAAGCTATaGCCACTCCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLLSFKL*PLPAPG
Trigger: CCCTGGTGCAGGGAGTGGCCATAGCTTAAATGATAA...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR CCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCTCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCTAAG +
Preference number: 4 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTSELCL*RLILPK
Trigger: CTTAGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR TCA 90 bp TTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGCGCTGCCGGCAAGACAGTaGATGGTAGGATGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSKDNQGMGEKLVPEKRALPARQ*MVGWEA
Trigger: TGCCTCCCATCCTACCATTCACTGTCTTGCCGGCAG...CGCTCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp GATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTCTGCCGGCAAGACAGTaGATGGTAGGATGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DDFYRHFPRWYWVSSPILLPARQ*MVGWEA
Trigger: TGCCTCCCATCCTACCATTCACTGTCTTGCCGGCAG...AAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTTTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATTTAAGCTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYLSSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAA...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCATTAAGCTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPLSSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAA...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCATTAAGCTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: FYRHFPRWYWVSSPILEALSSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAA...TGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGACTAGGGATGCTGCGCAGCACCCTACAGTGCATGAATCTGGGGTTACCTGCCTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RLGMLRSTLQCMNLGLPAYPRIF*ALDRSR
Trigger: CCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATA...GGCAGGTAACCCCAGATTCATGCACTGTAGGGTGCTGCGCAGCATCCCTAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCCTTCAAAGTTGTAGTTaGCCATCCAATAGATACACA +
Preference number: 4 (lower is better)
Translates to: QKMPTPTVPSTHVTCGFGLQSCS*PSNRYT
Trigger: TGTGTATCTATTGGATGGTCAACTACAACTTTGAAG...GCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGCAGCAGGATGTTCCTaGTGGTCTCATCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VSLQDCETGRKLSSREVRAAGCS*WSHLQS
Trigger: ACTTTGAAGATGAGACCATCAGGAACATCCTGCTGC...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGATTACTGGCCTCGCTaGTTGGAGCTGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYDYWPR*LELVQQ
Trigger: CTGCTGCACCAGCTCCAATCAGCGAGGCCAGTAATC...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTGGTGGCCTGGGGTCGTaGAGAGTGGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFGGLGS*RVVQAE
Trigger: TTCTGCCTGCACCACTCTTCACGACCCCAGGCCACC...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTCTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCLDLGC*LSEAVF
Trigger: GAAAACTGCTTCCGACAATCAACAGCCAAGATCCAG...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTTGTGCCTTTGGCGGTTaGTCCTCCCCGGACAATCTG +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCCAFGG*SSPDNL
Trigger: CAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACA...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCCCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 4 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRAFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392583.7
CDS-3UTR TCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCCTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAAGCTTACTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: TLVPITEFRPIKGGQLFKAYSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGC...TTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCGAAAATCCAGGTTGCTaGGACAGTGTTCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPENPGC*DSVQGN
Trigger: ATTCCCTTGAACACTGTCTCAGCAACCTGGATTTTC...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR TCA 90 bp GGTGGGCCGGGAGCGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAAGCAAGGAATGAATCGTaGCCCCAGCAGAGGAAAATC +
Preference number: 4 (lower is better)
Translates to: GGPGANEVSLQDCETGRKARNES*PQQRKI
Trigger: GATTTTCCTCTGCTGGGGTCACGATTCATTCCTTGC...TTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR TCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAGTGGGAGGATCACTTaGGGGCCAGGAGTTCGAGAA +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPSGRIT*GPGVRE
Trigger: TTCTCGAACTCCTGGCCCTCAAGTGATCCTCCCACT...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680122.1
CDS-3UTR GCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACTTGCTCTCAGCTGGCTaGCGGCAAGACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENLLSAG*RQDSEW
Trigger: CCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAA...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680138.1
CDS-3UTR GCA 90 bp AAGAGTGTGGGAATGTTTGCTGAGACAGGAGACACAAGAGGTGGGCAGGTCTTATTGCTCTCAGCTGGCTaGCGGCAAGACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: KSVGMFAETGDTRGGQVLLLSAG*RQDSEW
Trigger: CCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAA...TAAGACCTGCCCACCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSNCSGS*RTSQMV
Trigger: CACCATCTGTGACGTCCTGCAGGAACCCGAACAGTT...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTACTCAGCTGACCCAGTaGATTAAAGGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LQDCETGRKLSSREVRGFTQLTQ*IKGRKH
Trigger: GTGCTTCCTGCCTTTAATGCACTGGGTCAGCTGAGT...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AAGATCACAGGCCTGGTTTTCTGCAACTGGCTCAGTAGAAACTTCCTCACGGTCCAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KITGLVFCNWLSRNFLTVQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...GACCGTGAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LQDCETGRKLSSREVRGFSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TPTVPSTHVTCGFGWVQDESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...ATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGTCTTTTCCTTCTTCCTaGTTGGATTGCAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: INEPCINLGAGCGARTQLSFPSS*LDCKPA
Trigger: GGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGA...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTACATAGGAGCCACCTATaGCCACTCCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVHRSHL*PLPAPG
Trigger: CCCTGGTGCAGGGAGTGGCCATAGGTGGCTCCTATG...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AGACTAGGGATGCTGCGCAGCACCCTACAGTGCATGAATCTGGGGTTACCTGCCCAAACTCACCAGGACTaGCATTTGTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: RLGMLRSTLQCMNLGLPAQTHQD*HLSYPR
Trigger: CCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTG...GGCAGGTAACCCCAGATTCATGCACTGTAGGGTGCTGCGCAGCATCCCTAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGCTCGCTGATTGGAGCTaGTGCAGCAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: DCETGRKLSSREVRGFIQLADWS*CSRMFL
Trigger: CAGGAACATCCTGCTGCACCAGCTCCAATCAGCGAG...CTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTACTGGCCTCGCTGATTaGAGCTGGTGCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: DDFYRHFPRWYWVSSPILTGLAD*SWCSRM
Trigger: CATCCTGCTGCACCAGCTCCAATCAGCGAGGCCAGT...AAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: INEPCINLGAGCGARTQLIGWVN*IQDYWP
Trigger: AGGCCAGTAATCTTGGATCCAGTTGACCCAACCAAT...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TCCAGAATTTCCTTAACCGAGGAGTCCCGTGCCCCCGTGGGCTGGCACCAGTTGACTCACATTATTGGTTaGGTCAACTGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SRISLTEESRAPVGWHQLTHIIG*VNWIQD
Trigger: ATCTTGGATCCAGTTGACCCAACCAATAATGTGAGT...CAACTGGTGCCAGCCCACGGGGGCACGGGACTCCTCGGTTAAGGAAATTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR CCA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LQDCETGRKLSSREVRGFNLSRR*PGVVKS
Trigger: ACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTT...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCATCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPSELCL*RLILPG
Trigger: TCCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAAGAAGCTCAGCACCCTaGGAGCCTTCCACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPRSSAP*EPSTWE
Trigger: CTCCCAAGTGGAAGGCTCCCAGGGTGCTGAGCTTCT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACAGAAGCTCAGCACCCTaGGAGCCTTCCACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHRSSAP*EPSTWE
Trigger: CTCCCAAGTGGAAGGCTCCCAGGGTGCTGAGCTTCT...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: NHSFASFARRCQHQRSPPHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCCTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATCTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAAGCTCCACAACTTCCTaGTGTCTGCATTGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPSSTTS*CLHCRH
Trigger: GTGCCGACAATGCAGACACCAGGAAGTTGTGGAGCT...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342315.8
CDS-3UTR CCA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCTTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGCAGACATCCTTGGGTaGCCAGTGCAACCCACGTCC +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPADILG*PVQPTS
Trigger: GGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGC...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCGCAGACATCCTTGGGTaGCCAGTGCAACCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RRSSLIQACYRAISRQRLADILG*PVQPTS
Trigger: GGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGC...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTTTTAATTGTCACAACTaGGTGGCATCTACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVFNCHN*VASTGY
Trigger: GTACCCAGTAGATGCCACCCAGTTGTGACAATTAAA...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCCCTCGGGGCTGGGTGTaGAGCCAGAACTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISPRGWV*SQNSAS
Trigger: ACTGGCTGAGTTCTGGCTCCACACCCAGCCCCGAGG...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551603.2
CDS-3UTR TCA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPNQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKNQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp CCCACTCATGGCCTAGAGGTTGCACAGAGCTGTCTGGCACCCGCTTCTTTGGCTATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: PTHGLEVAQSCLAPASLAIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...AGCCAAAGAAGCGGGTGCCAGACAGCTCTGTGCAACCTCTAGGCCATGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR TCA 90 bp GGTTGCACAGAGCTGTCTGGCACCCGCTTCTTTGGCTTTTCTCTCCTGACACCCTTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GCTELSGTRFFGFSLLTPFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...GGGTGTCAGGAGAGAAAAGCCAAAGAAGCGGGTGCCAGACAGCTCTGTGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR TCA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTTAAGCTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWLSSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAA...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTATATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVYPRIF*ALDRSR
Trigger: CCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATA...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGTTTTTCTGGCACTGTTaGTGCCAGTGCTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: QDCPETFCSVKIRHSTPLFFWHC*CQCFIK
Trigger: CTTGATAAAGCACTGGCATCAACAGTGCCAGAAAAA...CAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGGCTCCAGTACGGTTCTaGCGCCTTCAGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: DCETGRKLSSREVRGFIQAPVRF*RLQQCQ
Trigger: TTGACATTGCTGAAGGCGTCAGAACCGTACTGGAGC...CTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACGCTTCTCCTGGCATTTaGTCAGCTCCAGTACGGTTC +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNASPGI*SAPVRF
Trigger: GAACCGTACTGGAGCTGATCAAATGCCAGGAGAAGC...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTGGTGGCCTGGGGTCGTaGAGAGTGGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSGGLGS*RVVQAE
Trigger: TTCTGCCTGCACCACTCTTCACGACCCCAGGCCACC...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGGGTGGCCTGGGGTCGTaGAGAGTGGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRGGLGS*RVVQAE
Trigger: TTCTGCCTGCACCACTCTTCACGACCCCAGGCCACC...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTCTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQDCETGRKLSSREVRGFLDLGC*LSEAVF
Trigger: GAAAACTGCTTCCGACAATCAACAGCCAAGATCCAG...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGTGTGCCTTTGGCGGTTaGTCCTCCCCGGACAATCTG +
Preference number: 4 (lower is better)
Translates to: ILVEYIRYILVGREGFGECAFGG*SSPDNL
Trigger: CAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACA...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGTGTAGCTTTTAAGTaGGTTATGGAACACGACGAG +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCGVAFK*VMEHDE
Trigger: CTCGTCGTGTTCCATAACTCACTTAAAAGCTACACC...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATTGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGCCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 4 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAATTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 4 (lower is better)
Translates to: VQARDAAQHPTMHKRASKFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 4 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRADSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: IQINEPCINLGAGCGARTNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVTQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACCTGGATGGTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACGCTTACTCAGAGCGTTaGAGGCGGCCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: TWMVNPSRDFWISKLFFNAYSER*RRPAPR
Trigger: TCGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGC...GTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCACCATCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR TCA 90 bp CTCTGGTCAAAACCTGCAAGCATGATCTGCGGACCAGCAGCTCATCATGGAGCTTTGGCTTTTCTCTCCTaGCACCCAGCAATGCTTACT +
Preference number: 4 (lower is better)
Translates to: LWSKPASMICGPAAHHGALAFLS*HPAMLT
Trigger: AGTAAGCATTGCTGGGTGTCAGGAGAGAAAAGCCAA...AGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp CTCTGGTCAAAACCTGCAAGCATGATCTGCGGACCAGCAGCTCATCATGGAGCTCCTGTAGGTTCCTTTTaGGTGCCTAGCTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LWSKPASMICGPAAHHGAPVGSF*VPSYLL
Trigger: AAGCAAGTAGCTAGGCACTCAAAAGGAACCTACAGG...AGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCGCAAGGAATGAATCGTaGCCCCAGCAGAGGAAAATC +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSARNES*PQQRKI
Trigger: GATTTTCCTCTGCTGGGGTCACGATTCATTCCTTGC...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAACCGTCATGCAAGGAATaGATCGTGACCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKPSCKE*IVTPAE
Trigger: CTCTGCTGGGGTCACGATTCATTCCTTGCATGACGG...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGACCGTCATGCAAGGAATaGATCGTGACCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGPSCKE*IVTPAE
Trigger: CTCTGCTGGGGTCACGATTCATTCCTTGCATGACGG...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp CAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTGGCGATCATTGGGTaGATATCCATAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: QDCPETFCSVKIRHSTPLLAIIG*ISIIEV
Trigger: TACCTCAATTATGGATATTCACCCAATGATCGCCAG...CAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCATGTGCCTTTGGCGGTTaGTCCTCCCTAAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPCAFGG*SSLRKK
Trigger: TTTCTTCCTTAGGGAGGATCAACCGCCAAAGGCACA...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR GCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGCAGAGGAATTCTTGCTaGTGCCCAGAGCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: VDELEAPRARSQSYENQGQRNSC*CPEPGN
Trigger: GTTTCCTGGCTCTGGGCAGCAGCAAGAATTCCTCTG...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680138.1
CDS-3UTR GCA 90 bp AAGAGTGTGGGAATGTTTGCTGAGACAGGAGACACAAGAGGTGGGCAGGTCTTAAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: KSVGMFAETGDTRGGQVLNCSGS*RTSQMV
Trigger: CACCATCTGTGACGTCCTGCAGGAACCCGAACAGTT...TAAGACCTGCCCACCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCAAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: NHSFASFARRCQHQRSPPNCSGS*RTSQMV
Trigger: CACCATCTGTGACGTCCTGCAGGAACCCGAACAGTT...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACGCTGATTGGAGCTGGTaGAGCAGGATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNADWSW*SRMFLM
Trigger: CATCAGGAACATCCTGCTGCACCAGCTCCAATCAGC...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: INEPCINLGAGCGARTQLTALSI*SRKHLL
Trigger: CAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGT...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATACTCAGCTGACCCAGTaGATTAAAGGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNTQLTQ*IKGRKH
Trigger: GTGCTTCCTGCCTTTAATGCACTGGGTCAGCTGAGT...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATCAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAACAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSRMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACTGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHCPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTAAAGGGTTGGCTGGCTaGTGGCATAGAGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCKGLAG*WHRGCL
Trigger: CAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTT...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR GCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAGGGTTGGCTGGCTaGTGGCATAGAGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNKGLAG*WHRGCL
Trigger: CAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTT...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCATCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPSLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 4 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATGAAATCCTGGGCTACTCTGGTCAAAACCTaGAAGCATGATCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: SADQQLIMELARNMKSWATLVKT*KHDLRT
Trigger: GGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAGT...AGCCCAGGATTTCATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp CTCTGGTCAAAACCTGCAAGCATGATCTGCGGACCAGCAGCTCATCATGGAGCTAAGGCAGACTTCAAATaGTTGCCCCAGCTGGACTTT +
Preference number: 4 (lower is better)
Translates to: LWSKPASMICGPAAHHGAKADFK*LPQLDF
Trigger: AAAGTCCAGCTGGGGCAAGCATTTGAAGTCTGCCTT...AGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGGCACCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGRHLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGTGCCT...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR GCA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATGTGTGTTTTCTCCTaGAGGTCTGGCGATCATTGG +
Preference number: 4 (lower is better)
Translates to: LQDCETGRKLSSREVRGFMCVFS*RSGDHW
Trigger: CCAATGATCGCCAGACCTGCAGGAGAAAACACACAT...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTGGCACCGAGGACAGCTaGGACTCCCCATTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LVPITEFRPIKGGQLFKSGTEDS*DSPFPI
Trigger: AATGGGAAATGGGGAGTCCCAGCTGTCCTCGGTGCC...AGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGEGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCCCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPPSRDF*ISKLFF
Trigger: GAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGG...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCATACACAGCTTCTCCTaGCATTTGATCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSIHSFS*HLISSS
Trigger: ACTGGAGCTGATCAAATGCCAGGAGAAGCTGTGTAT...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACCTCGCTGATTGGAGCTaGTGCAGCAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHLADWS*CSRMFL
Trigger: CAGGAACATCCTGCTGCACCAGCTCCAATCAGCGAG...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGACTCATTATCCAGGTTaGGAGAAGTCAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLTHYPG*EKSTRF
Trigger: AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGT...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCTCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SLKTLLIVTTGWHLLGTGSELCL*RLILPG
Trigger: TCCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp CAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTTTTAAGTGAGTTATaGAACACGACGAGATCGGCA +
Preference number: 4 (lower is better)
Translates to: QDCPETFCSVKIRHSTPLLLSEL*NTTRSA
Trigger: TGCCGATCTCGTCGTGTTCCATAACTCACTTAAAAG...CAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGAGAAGCTCAGCACCCTaGGAGCCTTCCACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLAMLKLNSISSPITSLERSSAP*EPSTWE
Trigger: CTCCCAAGTGGAAGGCTCCCAGGGTGCTGAGCTTCT...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGAGAAGCTCAGCACCCTaGGAGCCTTCCACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KERTWWREPSISGGRISWRSSAP*EPSTWE
Trigger: CTCCCAAGTGGAAGGCTCCCAGGGTGCTGAGCTTCT...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATCCTCGGGGCTGGGTGTaGAGCCAGAACTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDPRGWV*SQNSAD
Trigger: GTCAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGG...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTCATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAACACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NHSFASFARRCQHQRSPPRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPRTWMS*KHREQD
Trigger: ATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCT...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCACACCTCCTTGGAGATTaGGGGTGGGATGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPHLLGD*GWDGAE
Trigger: TTCAGCCCCATCCCACCCCCAATCTCCAAGGAGGTG...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTGCCCCATCACCTCCTTaGAGATTGGGGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: AENSNALTTCLVFLAWPTAPSPP*RLGVGW
Trigger: CCATCCCACCCCCAATCTCCAAGGAGGTGATGGGGC...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GATGAGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTGCCCCATCACCTCCTTaGAGATTGGGGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: DENISLTIGWILAPQLPGAPSPP*RLGVGW
Trigger: CCATCCCACCCCCAATCTCCAAGGAGGTGATGGGGC...ACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp AGCTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCTTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SSRTVRKPSAVSKSGTPLFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...GAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGGGAGGGAGGATATCCTaGTGGAATATATCAGGTATA +
Preference number: 4 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLGGRIS*WNISGI
Trigger: TATACCTGATATATTCCACCAGGATATCCTCCCTCC...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVRTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTACCCCACGGTTGGCTTaGCCACCTCTTCCCTACATT +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCTPRLA*PPLPYI
Trigger: AATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGT...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CTCTGGTCAAAACCTGCAAGCATGATCTGCGGACCAGCAGCTCATCATGGAGCTTCTCTGAACCTACTCTaGCTCAGGAGGCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: LWSKPASMICGPAAHHGASLNLL*LRRLLD
Trigger: ATCTAGAAGCCTCCTGAGCCAGAGTAGGTTCAGAGA...AGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp CTCTGGTCAAAACCTGCAAGCATGATCTGCGGACCAGCAGCTCATCATGGAGCTTCGGCCAATCAAAGGTaGCCAACTGTTCAAATCTCG +
Preference number: 4 (lower is better)
Translates to: LWSKPASMICGPAAHHGASANQR*PTVQIS
Trigger: CGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGA...AGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR CAA 72 bp CCCTGTGGAATCAAGATGCGCTACCTTCCTAGTACATaGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PCGIKMRYLPST*ECLPIRKLPKP
Trigger: AGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTTGATTCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTGCCGGCAAGACAGTaGATGGTAGGATGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFLPARQ*MVGWEA
Trigger: TGCCTCCCATCCTACCATTCACTGTCTTGCCGGCAG...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680138.1
CDS-3UTR TCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSNQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGCTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCTTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSRTVRKPSAVSKSGTPLFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...GAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCTCTGCTGGAGTTCAGTaGAGCAGACTGCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVSAGVQ*SRLQTH
Trigger: GTGAGTTTGCAGTCTGCTTCACTGAACTCCAGCAGA...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAGCTCCAGTACGGTTCTaGCGCCTTCAGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGAPVRF*RLQQCQ
Trigger: TTGACATTGCTGAAGGCGTCAGAACCGTACTGGAGC...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACGCTCCAGTACGGTTCTaGCGCCTTCAGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHAPVRF*RLQQCQ
Trigger: TTGACATTGCTGAAGGCGTCAGAACCGTACTGGAGC...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGGCTCCAGTACGGTTCTaGCGCCTTCAGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLAPVRF*RLQQCQ
Trigger: TTGACATTGCTGAAGGCGTCAGAACCGTACTGGAGC...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCTTCTCCTGGCATTTaGTCAGCTCCAGTACGGTTC +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILEASPGI*SAPVRF
Trigger: GAACCGTACTGGAGCTGATCAAATGCCAGGAGAAGC...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACGCTTCTCCTGGCATTTaGTCAGCTCCAGTACGGTTC +
Preference number: 4 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHASPGI*SAPVRF
Trigger: GAACCGTACTGGAGCTGATCAAATGCCAGGAGAAGC...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAGCTTCTCCTGGCATTTaGTCAGCTCCAGTACGGTTC +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGASPGI*SAPVRF
Trigger: GAACCGTACTGGAGCTGATCAAATGCCAGGAGAAGC...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCTTCAAAGTTGTAGTTaGCCATCCAATAGATACACA +
Preference number: 4 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVLQSCS*PSNRYT
Trigger: TGTGTATCTATTGGATGGTCAACTACAACTTTGAAG...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCGATTACTGGCCTCGCTaGTTGGAGCTGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFDYWPR*LELVQQ
Trigger: CTGCTGCACCAGCTCCAATCAGCGAGGCCAGTAATC...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCTGTGCCTTTGGCGGTTaGTCCTCCCCGGACAATCTG +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISCAFGG*SSPDNL
Trigger: CAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACA...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAATGTGCCTTTGGCGGTTaGTCCTCCCCGGACAATCTG +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKCAFGG*SSPDNL
Trigger: CAGATTGTCCGGGGAGGATCAACCGCCAAAGGCACA...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCGTTCATGGATTTCCTTaGCGATTTTGTGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSVHGFP*RFCAAR
Trigger: ACGAGCGGCACAAAATCGTCAAGGAAATCCATGAAC...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCTGCGTTCATGGATTTCCTTaGCGATTTTGTGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: RKLSSREVRGFIQINEPCVHGFP*RFCAAR
Trigger: ACGAGCGGCACAAAATCGTCAAGGAAATCCATGAAC...GCAGGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RRSSLIQACYRAISRQRLWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 4 (lower is better)
Translates to: VSLQDCETGRKLSSREVRIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 4 (lower is better)
Translates to: DDFYRHFPRWYWVSSPILFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...AAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 4 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR TCA 90 bp AGACTAGGGATGCTGCGCAGCACCCTACAGTGCATGAATCTGGGGTTACCTGCCAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RLGMLRSTLQCMNLGLPAKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...GGCAGGTAACCCCAGATTCATGCACTGTAGGGTGCTGCGCAGCATCCCTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRHPWVASATHVHSHLCSKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGGGGTGGGATGGGGCTaGAAATTCCAATGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: VDELEAPRARSQSYENQGGVGWG*KFQCFN
Trigger: GTTAAAGCATTGGAATTTTCAGCCCCATCCCACCCC...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACGGGGTGGGATGGGGCTaGAAATTCCAATGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNGVGWG*KFQCFN
Trigger: GTTAAAGCATTGGAATTTTCAGCCCCATCCCACCCC...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTACTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGCTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 4 (lower is better)
Translates to: SSRTVRKPSAVSKSGTPLLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...GAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTAACAAGGTTCCAGGTGGGATTCTTCTCTCCTaGGGGTCTATGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: GSNSDLLSQDLHFNKVPGGILLS*GSMVSH
Trigger: ATGGGAGACCATAGACCCTCAGGAGAGAAGAATCCC...ACCTGGAACCTTGTTAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCTGTGCCTTTGGCGGTTaGTCCTCCCTGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISCAFGG*SSLLLR
Trigger: CCTGAGAAGCAGGGAGGATCAACCGCCAAAGGCACA...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680138.1
CDS-3UTR GCA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTTGCTCTCAGCTGGCTaGCGGCAAGACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: KERTWWREPSISGGRISWLLSAG*RQDSEW
Trigger: CCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAA...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGCCTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRPMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGG...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCGGGTACCATCGGAGTTaGCTCTTAAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSGYHRS*LLRLFS
Trigger: GGAAAACAGTCTTAAGAGGCAACTCCGATGGTACCC...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACTTCAGTGAAGCAGACTaGAAACTCACCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDFSEAD*KLTRTG
Trigger: GCCAGTCCTGGTGAGTTTGCAGTCTGCTTCACTGAA...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTGCTGATTGGAGCTGGTaGAGCAGGATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCADWSW*SRMFLM
Trigger: CATCAGGAACATCCTGCTGCACCAGCTCCAATCAGC...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: VSLQDCETGRKLSSREVRTALSI*SRKHLL
Trigger: CAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGT...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTACTCAGCTGACCCAGTaGATTAAAGGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: YIGMSANQEAPQASLSRVTQLTQ*IKGRKH
Trigger: GTGCTTCCTGCCTTTAATGCACTGGGTCAGCTGAGT...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR GCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACACTCAGCTGACCCAGTaGATTAAAGGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENTQLTQ*IKGRKH
Trigger: GTGCTTCCTGCCTTTAATGCACTGGGTCAGCTGAGT...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGERMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACTGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDCPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTTGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASCPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp AGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCTTGGATTGCAAACCTaGCATCTGGAGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: SLKTLLIVTTGWHLLGTGLGLQT*HLEAPW
Trigger: CCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAG...GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGCTTGGATTGCAAACCTaGCATCTGGAGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: KERTWWREPSISGGRISWLGLQT*HLEAPW
Trigger: CCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAG...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTTCTTTTCCTTCTTCCTaGTTGGATTGCAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: LQDCETGRKLSSREVRGFSFPSS*LDCKPA
Trigger: GGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGA...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPSLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 4 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRATGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp CCTACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCCCTGACACCCAGCAATaGTTACTCAGAGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PTLVPITEFRPIKGGQLFPDTQQ*LLRALK
Trigger: CTTCAACGCTCTGAGTAAGCATTGCTGGGTGTCAGG...GAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp ACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCATGGCCTAGAGGTTaGACAGAGCTGTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: TLVPITEFRPIKGGQLFKSWPRG*TELSGT
Trigger: GGTGCCAGACAGCTCTGTGCAACCTCTAGGCCATGA...TTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCAGAACTCAGCCAGTaGATTAAAGGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: NHSFASFARRCQHQRSPPPELSQ*IKGRKH
Trigger: GTGCTTCCTGCCTTTAATGCACTGGCTGAGTTCTGG...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551603.2
CDS-3UTR CCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACATACACAGCTTCTCCTaGCATTTGATCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYIHSFS*HLISSS
Trigger: ACTGGAGCTGATCAAATGCCAGGAGAAGCTGTGTAT...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGATACACAGCTTCTCCTaGCATTTGATCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGEIHSFS*HLISSS
Trigger: ACTGGAGCTGATCAAATGCCAGGAGAAGCTGTGTAT...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCACTGGCCTCGCTGATTaGAGCTGGTGCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFTGLAD*SWCSRM
Trigger: CATCCTGCTGCACCAGCTCCAATCAGCGAGGCCAGT...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTIGWVN*IQDYWP
Trigger: AGGCCAGTAATCTTGGATCCAGTTGACCCAACCAAT...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCTCCACTCACATTATTaGTTGGGTCAACTGGATCCA +
Preference number: 4 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTLHSHY*LGQLDP
Trigger: TGGATCCAGTTGACCCAACCAATAATGTGAGTGGAG...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGACTCCACTCACATTATTaGTTGGGTCAACTGGATCCA +
Preference number: 4 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGLHSHY*LGQLDP
Trigger: TGGATCCAGTTGACCCAACCAATAATGTGAGTGGAG...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGCTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCACTCATTATCCAGGTTaGGAGAAGTCAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSRTVRKPSAVSKSGTPLTHYPG*EKSTRF
Trigger: AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGT...GAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCATGGGGTCGTGAAGAGTaGTGCAGGCAGAACATTCCA +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPWGREE*CRQNIP
Trigger: TGGAATGTTCTGCCTGCACCACTCTTCACGACCCCA...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTTGGGGTCGTGAAGAGTaGTGCAGGCAGAACATTCCA +
Preference number: 4 (lower is better)
Translates to: DDFYRHFPRWYWVSSPILWGREE*CRQNIP
Trigger: TGGAATGTTCTGCCTGCACCACTCTTCACGACCCCA...AAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: DCETGRKLSSREVRGFIQNLSRR*PGVVKS
Trigger: ACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTT...CTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNNLSRR*PGVVKS
Trigger: ACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTT...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCTGCGGACAATCTGGATCTTaGCTGTTGATTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RKLSSREVRGFIQINEPCGQSGS*LLIVGS
Trigger: GCTTCCGACAATCAACAGCCAAGATCCAGATTGTCC...GCAGGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACGGACAATCTGGATCTTaGCTGTTGATTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHGQSGS*LLIVGS
Trigger: GCTTCCGACAATCAACAGCCAAGATCCAGATTGTCC...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGACTAGGGATGCTGCGCAGCACCCTACAGTGCATGAATCTGGGGTTACCTGCCGCTTTCAGCTGTTCATaGATTTCCTTGACGATTTTG +
Preference number: 4 (lower is better)
Translates to: RLGMLRSTLQCMNLGLPAAFSCS*ISLTIL
Trigger: CAAAATCGTCAAGGAAATCCATGAACAGCTGAAAGC...GGCAGGTAACCCCAGATTCATGCACTGTAGGGTGCTGCGCAGCATCCCTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTAGAAGCTCAGCACCCTaGGAGCCTTCCACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFRSSAP*EPSTWE
Trigger: CTCCCAAGTGGAAGGCTCCCAGGGTGCTGAGCTTCT...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGCATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGACTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCCAAGATCACAGGCCTaGTTTTCTGCAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENPRSQA*FSATGS
Trigger: TGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGG...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680138.1
CDS-3UTR CCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTCCAAGATCACAGGCCTaGTTTTCTGCAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASPRSQA*FSATGS
Trigger: TGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGG...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTCACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATCACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDRTWMS*KHREQD
Trigger: ATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCATGCTTGGTCTTTCTaGCTTGGCCAACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENHAWSF*LGQLLP
Trigger: AGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATG...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCACACCTCCTTGGAGATTaGGGGTGGGATGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISHLLGD*GWDGAE
Trigger: TTCAGCCCCATCCCACCCCCAATCTCCAAGGAGGTG...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTTGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: KAERSVNPGERLTMSEDFCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCTGTGGCAGACATCCTTaGGTGGCCAGTGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISCGRHP*VASATH
Trigger: GTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACA...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGGCTTTGGAGAGGTGTaGCAGACATCCTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGGFGEV*QTSLGG
Trigger: GCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCC...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGCTTTGGAGAGGTGTaGCAGACATCCTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISGFGEV*QTSLGG
Trigger: GCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCC...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCAAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNARTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTAAAGAAAGAACCTGGTaGAGAGAACCAAGTATATCT +
Preference number: 4 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGKERTW*REPSIS
Trigger: AGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTACCCCACGGTTGGCTTaGCCACCTCTTCCCTACATT +
Preference number: 4 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSTPRLA*PPLPYI
Trigger: AATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGT...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CCTACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCTTTGTTTCTGGATTATaGCCACTCCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PTLVPITEFRPIKGGQLFFVSGL*PLPAPG
Trigger: CCCTGGTGCAGGGAGTGGCCATAATCCAGAAACAAA...GAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
3UTR CAA 72 bp CCTTTGGCGGTTGATCCTCCCCGGACAATCTGGATCTaGGCTGTTGATTGTCGGAAGCAGTTTTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: PLAVDPPRTIWI*AVDCRKQFSLR
Trigger: CCTTAAAGAAAACTGCTTCCGACAATCAACAGCCAAGATCCAGATTGTCCGGGGAGGATCAACCGCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR TCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATCTGCCGGCAAGACAGTaGATGGTAGGATGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDLPARQ*MVGWEA
Trigger: TGCCTCCCATCCTACCATTCACTGTCTTGCCGGCAG...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCATTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNAFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSYPRIF*ALDRSR
Trigger: CCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATA...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCATCTGCTGGAGTTCAGTaGAGCAGACTGCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPSAGVQ*SRLQTH
Trigger: GTGAGTTTGCAGTCTGCTTCACTGAACTCCAGCAGA...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGTCTGCTGGAGTTCAGTaGAGCAGACTGCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLSAGVQ*SRLQTH
Trigger: GTGAGTTTGCAGTCTGCTTCACTGAACTCCAGCAGA...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGATCTGCTGGAGTTCAGTaGAGCAGACTGCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGSAGVQ*SRLQTH
Trigger: GTGAGTTTGCAGTCTGCTTCACTGAACTCCAGCAGA...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGTTTTTCTGGCACTGTTaGTGCCAGTGCTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGEFFWHC*CQCFIK
Trigger: CTTGATAAAGCACTGGCATCAACAGTGCCAGAAAAA...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTGCAGCAGGATGTTCCTaGTGGTCTCATCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCAAGCS*WSHLQS
Trigger: ACTTTGAAGATGAGACCATCAGGAACATCCTGCTGC...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGATTACTGGCCTCGCTaGTTGGAGCTGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KSLAMLKLNSISSPITSLDYWPR*LELVQQ
Trigger: CTGCTGCACCAGCTCCAATCAGCGAGGCCAGTAATC...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGTGGCCTGGGGTCGTaGAGAGTGGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTGGLGS*RVVQAE
Trigger: TTCTGCCTGCACCACTCTTCACGACCCCAGGCCACC...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACCTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDLDLGC*LSEAVF
Trigger: GAAAACTGCTTCCGACAATCAACAGCCAAGATCCAG...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VQARDAAQHPTMHKRASKLDLGC*LSEAVF
Trigger: GAAAACTGCTTCCGACAATCAACAGCCAAGATCCAG...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGGGTGTAGCTTTTAAGTaGGTTATGGAACACGACGAG +
Preference number: 4 (lower is better)
Translates to: RMKFRCRTVKQVENSPPGGVAFK*VMEHDE
Trigger: CTCGTCGTGTTCCATAACTCACTTAAAAGCTACACC...CCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGGTGTAGCTTTTAAGTaGGTTATGGAACACGACGAG +
Preference number: 4 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPGVAFK*VMEHDE
Trigger: CTCGTCGTGTTCCATAACTCACTTAAAAGCTACACC...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGTGGGCCGGGAGCGAATaGAGTTTCGCTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLWAGSE*SFAAGL
Trigger: CAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCA...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 4 (lower is better)
Translates to: SLAMLKLNSISSPITSLEFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTTCCAGTCCCATCCTTaGAGCAGGGAGAGGATAACC +
Preference number: 4 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWFQSHP*SRERIT
Trigger: GGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAA...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGCAGACAGGACGTGGATaGGTTGGAAGCACCGAGAGC +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRQTGRG*VGSTES
Trigger: GCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTG...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGGGGGTGGGATGGGGCTaGAAATTCCAATGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLGVGWG*KFQCFN
Trigger: GTTAAAGCATTGGAATTTTCAGCCCCATCCCACCCC...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTGGCTTCAGTTTCCTTTCGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: QLQGILWGQRPLWLQFPFVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...GAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVTFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPTQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp ATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACAACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: IVTTGWHLLGTGQRCCSTTQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...TGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGGTCGTTGCCTTGATTTTGGGGATTCTTCTCTCCTaGGGGTCTATGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: GTPSSFDSYLWKVVALILGILLS*GSMVSH
Trigger: ATGGGAGACCATAGACCCTCAGGAGAGAAGAATCCC...CAAAATCAAGGCAACGACCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGACCTCTCTCCACCCACTaGAGCGAGCTTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGPLSTH*SELTNS
Trigger: AGAGTTGGTAAGCTCGCTGCAGTGGGTGGAGAGAGG...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342315.8
CDS-3UTR GCA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGCAGAGGAATTCTTGCTaGTGCCCAGAGCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLAMLKLNSISSPITSLEQRNSC*CPEPGN
Trigger: GTTTCCTGGCTCTGGGCAGCAGCAAGAATTCCTCTG...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680138.1
CDS-3UTR GCA 90 bp GATGAGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTTTGCTCTCAGCTGGCTaGCGGCAAGACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: DENISLTIGWILAPQLPGLLSAG*RQDSEW
Trigger: CCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAA...ACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680138.1
CDS-3UTR GCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAATTGCTCTCAGCTGGCTaGCGGCAAGACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKLLSAG*RQDSEW
Trigger: CCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAA...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680138.1
CDS-3UTR GCA 90 bp GTTCAAATAAGGCCAATGCTGAGCTATAACCAGTCTGGCTGTTTCTGTACCTCATTGCTCTCAGCTGGCTaGCGGCAAGACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: VQIRPMLSYNQSGCFCTSLLSAG*RQDSEW
Trigger: CCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAA...TGAGGTACAGAAACAGCCAGACTGGTTATAGCTCAGCATTGGCCTTATTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTGGGTACCATCGGAGTTaGCTCTTAAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFGYHRS*LLRLFS
Trigger: GGAAAACAGTCTTAAGAGGCAACTCCGATGGTACCC...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR GCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCGGGTACCATCGGAGTTaGCTCTTAAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPGYHRS*LLRLFS
Trigger: GGAAAACAGTCTTAAGAGGCAACTCCGATGGTACCC...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR GCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTCAGTGAAGCAGACTaGAAACTCACCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHFSEAD*KLTRTG
Trigger: GCCAGTCCTGGTGAGTTTGCAGTCTGCTTCACTGAA...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAGCTGATTGGAGCTGGTaGAGCAGGATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVADWSW*SRMFLM
Trigger: CATCAGGAACATCCTGCTGCACCAGCTCCAATCAGC...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGCTGATTGGAGCTGGTaGAGCAGGATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPADWSW*SRMFLM
Trigger: CATCAGGAACATCCTGCTGCACCAGCTCCAATCAGC...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: IQINEPCINLGAGCGARTTALSI*SRKHLL
Trigger: CAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGT...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGTALSI*SRKHLL
Trigger: CAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGT...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: SLAMLKLNSISSPITSLEQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCACAGATCAATGAGCCCTaGATAAACCTCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISQINEP*INLGAG
Trigger: CCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGTGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLCPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCACAGGCCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPTGLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGT...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR GCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTCAACTTCCTGGTGTCTaGATTGTCGGCACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: YIGMSANQEAPQASLSRVQLPGV*IVGTFQ
Trigger: TTGGAAAGTGCCGACAATGCAGACACCAGGAAGTTG...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342315.8
CDS-3UTR GCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTCTTTTCCTTCTTCCTaGTTGGATTGCAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSSFPSS*LDCKPA
Trigger: GGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGA...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTTCCTTGGGTGGCCAGTaGAACCCACGTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSSLGGQ*NPRPQS
Trigger: TGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGA...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGTCATGGCCTAGAGGTTaGACAGAGCTGTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKSWPRG*TELSGT
Trigger: GGTGCCAGACAGCTCTGTGCAACCTCTAGGCCATGA...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp GGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTAACAAGGTTCCAGGTACTCTGGTCAAAACCTaGAAGCATGATCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: GSNSDLLSQDLHFNKVPGTLVKT*KHDLRT
Trigger: GGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAGT...ACCTGGAACCTTGTTAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATCTCCACTCACATTATTaGTTGGGTCAACTGGATCCA +
Preference number: 4 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNLHSHY*LGQLDP
Trigger: TGGATCCAGTTGACCCAACCAATAATGTGAGTGGAG...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCATGGGGTCGTGAAGAGTaGTGCAGGCAGAACATTCCA +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPWGREE*CRQNIP
Trigger: TGGAATGTTCTGCCTGCACCACTCTTCACGACCCCA...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPNLSRR*PGVVKS
Trigger: ACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTGGACAATCTGGATCTTaGCTGTTGATTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: YIGMSANQEAPQASLSRVGQSGS*LLIVGS
Trigger: GCTTCCGACAATCAACAGCCAAGATCCAGATTGTCC...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCGGACAATCTGGATCTTaGCTGTTGATTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPGQSGS*LLIVGS
Trigger: GCTTCCGACAATCAACAGCCAAGATCCAGATTGTCC...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAAGGACAATCTGGATCTTaGCTGTTGATTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VQARDAAQHPTMHKRASKGQSGS*LLIVGS
Trigger: GCTTCCGACAATCAACAGCCAAGATCCAGATTGTCC...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCACCTCCCCGGACAATCTaGATCTTGGCTGTTGATTGT +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPPPRTI*ILAVDC
Trigger: ACAATCAACAGCCAAGATCCAGATTGTCCGGGGAGG...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACCCTCCCCGGACAATCTaGATCTTGGCTGTTGATTGT +
Preference number: 4 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHPPRTI*ILAVDC
Trigger: ACAATCAACAGCCAAGATCCAGATTGTCCGGGGAGG...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGCTTTTAAGTGAGTTATaGAACACGACGAGATCGGCA +
Preference number: 4 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGLLSEL*NTTRSA
Trigger: TGCCGATCTCGTCGTGTTCCATAACTCACTTAAAAG...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTCCTCGGGGCTGGGTGTaGAGCCAGAACTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTPRGWV*SQNSAD
Trigger: GTCAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGG...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GATGAGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTCATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: DENISLTIGWILAPQLPGHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...ACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTACTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTCCAAGGCATACTTTaGGGGCAAAGACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RRSSLIQACYRAISRQRLLQGIL*GQRPLW
Trigger: CCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAG...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCTGCCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: RKLSSREVRGFIQINEPCLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...GCAGGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTCCAAGATCACAGGCCTaGTTTTCTGCAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCPRSQA*FSATGS
Trigger: TGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGG...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680138.1
CDS-3UTR CCA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGCACCCACGTCACCTGTaGGTTCGGCTGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLHPRHL*VRLGPR
Trigger: TCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTG...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTACGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCACGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAAGGACGTGGATGAGTTaGAAGCACCGAGAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGRTWMS*KHREQD
Trigger: ATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCT...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGGGTTGGCTGGCTGCTaGCATAGAGGATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGGLAGC*HRGCLC
Trigger: ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCC...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCACATGCTTGGTCTTTCTaGCTTGGCCAACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPHAWSF*LGQLLP
Trigger: AGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATG...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGACATGCTTGGTCTTTCTaGCTTGGCCAACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGHAWSF*LGQLLP
Trigger: AGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATG...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGACTTTTGGTTGTCACTaGGAGAGGAGGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQTFGCH*ERRASG
Trigger: GCCACTAGCCCTCCTCTCCCAGTGACAACCAAAAGT...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTGGCTTCAGTTTCCTTTCATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: QLQGILWGQRPLWLQFPFMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...GAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTGGCTTCAGTTTCCTTTCTTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: QLQGILWGQRPLWLQFPFFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...GAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACTTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGAGGATATCCTGGTaGAATATATCAGGTATATCT +
Preference number: 4 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCGRISW*NISGIS
Trigger: AGATATACCTGATATATTCCACCAGGATATCCTCCC...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSRTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTAAAGAAAGAACCTGGTaGAGAGAACCAAGTATATCT +
Preference number: 4 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPKERTW*REPSIS
Trigger: AGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392583.7
CDS-3UTR CCA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCAAAGAAAGAACCTGGTaGAGAGAACCAAGTATATCT +
Preference number: 4 (lower is better)
Translates to: GRHPWVASATHVHSHLCSKERTW*REPSIS
Trigger: AGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTACCCCACGGTTGGCTTaGCCACCTCTTCCCTACATT +
Preference number: 4 (lower is better)
Translates to: AENSNALTTCLVFLAWPTTPRLA*PPLPYI
Trigger: AATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGT...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGCTCCACAACTTCCTaGTGTCTGCATTGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGSSTTS*CLHCLK
Trigger: TTTTAGACAATGCAGACACCAGGAAGTTGTGGAGCT...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCATGTGACAGGTTCTGTTaGCTAGCACTTTCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPCDRFC*LALSPV
Trigger: GACGGGGGAAAGTGCTAGCCAACAGAACCTGTCACA...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTTCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFSELCL*RLILPA
Trigger: AGCAGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680138.1
3UTR CAA 72 bp TTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTaGGCCAACTCCTTCCTTGAAACTAAGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: FQCFNHMLGLSG*ANSFLETKGPP
Trigger: TGGTGGGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGAACCAACCCAGCTTCTaGGCAGGCACCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: LISGCYSRRSSLIQACYRNQPSF*AGTEDS
Trigger: GCTGTCCTCGGTGCCTGCTCAGAAGCTGGGTTGGTT...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: GTFQGGIGFPVPSLKQGEIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...CTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENYPRIF*ALDRSR
Trigger: CCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATA...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGCTCCAGTACGGTTCTaGCGCCTTCAGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKAPVRF*RLQQCQ
Trigger: TTGACATTGCTGAAGGCGTCAGAACCGTACTGGAGC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGCTTCTCCTGGCATTTaGTCAGCTCCAGTACGGTTC +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKASPGI*SAPVRF
Trigger: GAACCGTACTGGAGCTGATCAAATGCCAGGAGAAGC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAACTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKLDLGC*LSEAVF
Trigger: GAAAACTGCTTCCGACAATCAACAGCCAAGATCCAG...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCGGTGTAGCTTTTAAGTaGGTTATGGAACACGACGAG +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPGVAFK*VMEHDE
Trigger: CTCGTCGTGTTCCATAACTCACTTAAAAGCTACACC...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILEKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GGTGGGCCGGGAGCGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAAACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: GGPGANEVSLQDCETGRKTTVII*AFGELE
Trigger: TTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGT...TTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAGGGGTGGGATGGGGCTaGAAATTCCAATGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVGVGWG*KFQCFN
Trigger: GTTAAAGCATTGGAATTTTCAGCCCCATCCCACCCC...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCTGCCTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 4 (lower is better)
Translates to: RKLSSREVRGFIQINEPCLFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...GCAGGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYTFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CCTACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCCTAACTCAGACCTCCTaGGTCAGGATCTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: PTLVPITEFRPIKGGQLFLTQTS*VRICIL
Trigger: TAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAG...GAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp ACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAAGTGTTCAAGACTCTCTaGACCTACTCTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TLVPITEFRPIKGGQLFKVFKTL*TYSGSG
Trigger: TCCTGAGCCAGAGTAGGTTCAGAGAGTCTTGAACAC...TTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCACTAACACCTCTTAGATaGAAGCAGCTCAGGGACGTG +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPLTPLR*KQLRDV
Trigger: CACGTCCCTGAGCTGCTTTCATCTAAGAGGTGTTAG...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGACCAGTTGGGCTAACTaGCACTGTTTCCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: ILVEYIRYILVGREGFGETSWAN*HCFQGQ
Trigger: TTGGCCTTGGAAACAGTGTCAGTTAGCCCAACTGGT...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR GCA 90 bp CATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGCAGAGGAATTCTTGCTaGTGCCCAGAGCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: HFLQRQSGYGGEVSSREEQRNSC*CPEPGN
Trigger: GTTTCCTGGCTCTGGGCAGCAGCAAGAATTCCTCTG...CTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKNCSGS*RTSQMV
Trigger: CACCATCTGTGACGTCCTGCAGGAACCCGAACAGTT...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp ACCTGGATGGTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: TWMVNPSRDFWISKLFFNNCSGS*RTSQMV
Trigger: CACCATCTGTGACGTCCTGCAGGAACCCGAACAGTT...GTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCACCATCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR GCA 90 bp TTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGCGGGGTACCATCGGAGTTaGCTCTTAAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FSKDNQGMGEKLVPEKRAGYHRS*LLRLFS
Trigger: GGAAAACAGTCTTAAGAGGCAACTCCGATGGTACCC...CGCTCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp GGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTAACAAGGTTCCAGGTGGGTACCATCGGAGTTaGCTCTTAAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSNSDLLSQDLHFNKVPGGYHRS*LLRLFS
Trigger: GGAAAACAGTCTTAAGAGGCAACTCCGATGGTACCC...ACCTGGAACCTTGTTAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTTTCAGTGAAGCAGACTaGAAACTCACCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSFSEAD*KLTRTG
Trigger: GCCAGTCCTGGTGAGTTTGCAGTCTGCTTCACTGAA...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTGCTGATTGGAGCTGGTaGAGCAGGATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: AENSNALTTCLVFLAWPTADWSW*SRMFLM
Trigger: CATCAGGAACATCCTGCTGCACCAGCTCCAATCAGC...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGGGTCGTGAAGAGTGGTaGAGGCAGAACATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SLAMLKLNSISSPITSLEGREEW*RQNIPR
Trigger: TCTTGGAATGTTCTGCCTGCACCACTCTTCACGACC...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp CGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGCACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 4 (lower is better)
Translates to: RMKFRCRTVKQVENSPPGHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...CCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTGTCCGGAAACCTTCTaGAGTGTCAAAATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWCPETF*SVKIRH
Trigger: GTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACA...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCATTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VADILGWPVQPTSTVIFVESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTCTTGGATTGCAAACCTaGCATCTGGAGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFLGLQT*HLEAPW
Trigger: CCACGGTGCCTCCAGATGGCAGGTTTGCAATCCAAG...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCTCTTTTCCTTCTTCCTaGTTGGATTGCAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVSFPSS*LDCKPA
Trigger: GGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGA...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR GCA 90 bp CAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: QDCPETFCSVKIRHSTPLKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...CAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGGTCGTTGCCTTGATTTTGCCTGACACCCAGCAATaGTTACTCAGAGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GTPSSFDSYLWKVVALILPDTQQ*LLRALK
Trigger: CTTCAACGCTCTGAGTAAGCATTGCTGGGTGTCAGG...CAAAATCAAGGCAACGACCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGCTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTAMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGC...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR GCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAGGCACCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLRHLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGTGCCT...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR GCA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGATAAATCGAGCGGAATaGAATAATTATGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLINRAE*NNYGEG
Trigger: ACCTTCACCATAATTATTGCATTCCGCTCGATTTAT...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTAACAAGGTTCCAGGTGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSNSDLLSQDLHFNKVPGGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...ACCTGGAACCTTGTTAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp CGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGGATAGATCCAGGGGCTaGGATTATCATTTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: RMKFRCRTVKQVENSPPGDRSRG*DYHLSS
Trigger: TGAGCTTAAATGATAATCCCAGCCCCTGGATCTATC...CCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTCAAACTCACCAGGACTaGCATTTGTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASQTHQD*HLSYPR
Trigger: CCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTG...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTATACACAGCTTCTCCTaGCATTTGATCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCIHSFS*HLISSS
Trigger: ACTGGAGCTGATCAAATGCCAGGAGAAGCTGTGTAT...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGCTCGCTGATTGGAGCTaGTGCAGCAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KSLAMLKLNSISSPITSLLADWS*CSRMFL
Trigger: CAGGAACATCCTGCTGCACCAGCTCCAATCAGCGAG...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDIGWVN*IQDYWP
Trigger: AGGCCAGTAATCTTGGATCCAGTTGACCCAACCAAT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCCTCCACTCACATTATTaGTTGGGTCAACTGGATCCA +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPLHSHY*LGQLDP
Trigger: TGGATCCAGTTGACCCAACCAATAATGTGAGTGGAG...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp CAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTGGCTTCAGTTTCCTTTCACTCATTATCCAGGTTaGGAGAAGTCAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QLQGILWGQRPLWLQFPFTHYPG*EKSTRF
Trigger: AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGT...GAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCATCCAGAAGGTGGCCTaGGGTCGTGAAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VSELISGCYSRRSSLIQAIQKVA*GREEWC
Trigger: GCACCACTCTTCACGACCCCAGGCCACCTTCTGGAT...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATACCTCGGGGCTGGGTGTaGAGCCAGAACTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLIPRGWV*SQNSAD
Trigger: GTCAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGG...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATCATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGCATAAACCTCGGGGCTaGGTGTGGAGCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRHKPRG*VWSQNS
Trigger: TGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATG...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: DCETGRKLSSREVRGFIQLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...CTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGCCAAGATCACAGGCCTaGTTTTCTGCAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQPRSQA*FSATGS
Trigger: TGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTTGG...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCCGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTGGGTTGGCTGGCTGCTaGCATAGAGGATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAGLAGC*HRGCLC
Trigger: ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCC...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCACCTTCCTAGTACATTaGAATGTCTGCCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRATFLVH*NVCQSG
Trigger: TCCTGATTGGCAGACATTCCAATGTACTAGGAAGGT...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCAGCTCCACAACTTCCTaGTGTCTGCATTGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSSSTTS*CLHCLK
Trigger: TTTTAGACAATGCAGACACCAGGAAGTTGTGGAGCT...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGTTGCACAGAGCTGTCTaGCACCCGCTTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKLHRAV*HPLLWL
Trigger: AAGCCAAAGAAGCGGGTGCCAGACAGCTCTGTGCAA...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp TCCAAGATGGTGCAGGTAACTCATTATCCAGGTTGGGAGAAGTCAACCAGGTTTAGTTCGAGAACATCCTaGCCAACATGCAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: SKMVQVTHYPGWEKSTRFSSRTS*PTCRNP
Trigger: GGGGTTTCTGCATGTTGGCCAGGATGTTCTCGAACT...AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGTTACCTGCACCATCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR TCA 90 bp AAGAGTGTGGGAATGTTTGCTGAGACAGGAGACACAAGAGGTGGGCAGGTCTTATTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KSVGMFAETGDTRGGQVLFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...TAAGACCTGCCCACCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTTCTGCTGGAGTTCAGTaGAGCAGACTGCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFSAGVQ*SRLQTH
Trigger: GTGAGTTTGCAGTCTGCTTCACTGAACTCCAGCAGA...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTGCTCCAGTACGGTTCTaGCGCCTTCAGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFAPVRF*RLQQCQ
Trigger: TTGACATTGCTGAAGGCGTCAGAACCGTACTGGAGC...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGGCAGCAGGATGTTCCTaGTGGTCTCATCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWAAGCS*WSHLQS
Trigger: ACTTTGAAGATGAGACCATCAGGAACATCCTGCTGC...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGGCAGCAGGATGTTCCTaGTGGTCTCATCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: ILVEYIRYILVGREGFGEAAGCS*WSHLQS
Trigger: ACTTTGAAGATGAGACCATCAGGAACATCCTGCTGC...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCACTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPLDLGC*LSEAVF
Trigger: GAAAACTGCTTCCGACAATCAACAGCCAAGATCCAG...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAGGTGTAGCTTTTAAGTaGGTTATGGAACACGACGAG +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGGVAFK*VMEHDE
Trigger: CTCGTCGTGTTCCATAACTCACTTAAAAGCTACACC...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAGGTGTAGCTTTTAAGTaGGTTATGGAACACGACGAG +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKGVAFK*VMEHDE
Trigger: CTCGTCGTGTTCCATAACTCACTTAAAAGCTACACC...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCGTTCATGGATTTCCTTaGCGATTTTGTGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: RRSSLIQACYRAISRQRLVHGFP*RFCAAR
Trigger: ACGAGCGGCACAAAATCGTCAAGGAAATCCATGAAC...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 4 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCCCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 4 (lower is better)
Translates to: VSELISGCYSRRSSLIQAPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAACCCAGGCATAGATGGTaGGCAGCTCCAAGGCATACT +
Preference number: 4 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQPRHRW*AAPRHT
Trigger: AGTATGCCTTGGAGCTGCTCACCATCTATGCCTGGG...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCTATGGCTTCTGGATaGGAACATCTCATTGACAAT +
Preference number: 4 (lower is better)
Translates to: IVTTGWHLLGTGQRCCSTSMASG*EHLIDN
Trigger: ATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGA...TGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACTCTATGGCTTCTGGATaGGAACATCTCATTGACAAT +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHSMASG*EHLIDN
Trigger: ATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGA...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 4 (lower is better)
Translates to: RRSSLIQACYRAISRQRLREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAAAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: VQARDAAQHPTMHKRASKSLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPTTVII*AFGELE
Trigger: TTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGT...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTAACGCCTCCTTTAGATaGCTTTTACCGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSNASFR*LLPALS
Trigger: GGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTT...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKTQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAACCCAGGGGAACGTTTaGCAATGTCTGAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILETQGNV*QCLKTF
Trigger: AAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGT...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGTGTGGGAATGTTTGCTaGGACAGGAGACACAAGAGG +
Preference number: 4 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKCGNVC*DRRHKR
Trigger: CCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACA...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCTGGCGATCATTGGGTaGATATCCATAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENLAIIG*ISIIEV
Trigger: TACCTCAATTATGGATATTCACCCAATGATCGCCAG...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680138.1
CDS-3UTR GCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGATTCAGTGAAGCAGACTaGAAACTCACCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGFSEAD*KLTRTG
Trigger: GCCAGTCCTGGTGAGTTTGCAGTCTGCTTCACTGAA...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAATTCAGTGAAGCAGACTaGAAACTCACCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKFSEAD*KLTRTG
Trigger: GCCAGTCCTGGTGAGTTTGCAGTCTGCTTCACTGAA...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCGGTCGTGAAGAGTGGTaGAGGCAGAACATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISGREEW*RQNIPR
Trigger: TCTTGGAATGTTCTGCCTGCACCACTCTTCACGACC...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENTALSI*SRKHLL
Trigger: CAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGT...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNTALSI*SRKHLL
Trigger: CAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGT...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: KSLAMLKLNSISSPITSLQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCACTCAGCTGACCCAGTaGATTAAAGGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISTQLTQ*IKGRKH
Trigger: GTGCTTCCTGCCTTTAATGCACTGGGTCAGCTGAGT...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGCACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 4 (lower is better)
Translates to: VDELEAPRARSQSYENQGHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTCACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 4 (lower is better)
Translates to: YIGMSANQEAPQASLSRVHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR GCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGATCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAACTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKLNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAACTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILELNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGACAGGCCAGAGATGCTaGTCAACATCCTACAATGCA +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQTGQRC*STSYNA
Trigger: TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGT...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CCTACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCTCTATGGAAGGTCGTTaGCTTGATTTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: PTLVPITEFRPIKGGQLFSMEGR*LDFDLV
Trigger: TACCAGGTCAAAATCAAGGCAACGACCTTCCATAGA...GAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp ACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAAGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TLVPITEFRPIKGGQLFKGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...TTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp AAATATGAAATCCTGGGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: KYEILGSNSDLLSQDLHFAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...AAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCCCAGGATTTCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHPSRDF*ISKLFF
Trigger: GAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGG...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAACAAACTCACCAGGACTaGCATTTGTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKQTHQD*HLSYPR
Trigger: CCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTG...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAACAAACTCACCAGGACTaGCATTTGTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILEQTHQD*HLSYPR
Trigger: CCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTG...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGATACACAGCTTCTCCTaGCATTTGATCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLIHSFS*HLISSS
Trigger: ACTGGAGCTGATCAAATGCCAGGAGAAGCTGTGTAT...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGIGWVN*IQDYWP
Trigger: AGGCCAGTAATCTTGGATCCAGTTGACCCAACCAAT...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCACTCACATTATTGGTTaGGTCAACTGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRATHIIG*VNWIQD
Trigger: ATCTTGGATCCAGTTGACCCAACCAATAATGTGAGT...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAACTCCACTCACATTATTaGTTGGGTCAACTGGATCCA +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILELHSHY*LGQLDP
Trigger: TGGATCCAGTTGACCCAACCAATAATGTGAGTGGAG...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTTGGGGTCGTGAAGAGTaGTGCAGGCAGAACATTCCA +
Preference number: 4 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSWGREE*CRQNIP
Trigger: TGGAATGTTCTGCCTGCACCACTCTTCACGACCCCA...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAACTTATCCAGAAGGTaGCCTGGGGTCGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISNLSRR*PGVVKS
Trigger: ACTCTTCACGACCCCAGGCCACCTTCTGGATAAGTT...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGGGACAATCTGGATCTTaGCTGTTGATTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: KERTWWREPSISGGRISWGQSGS*LLIVGS
Trigger: GCTTCCGACAATCAACAGCCAAGATCCAGATTGTCC...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGCTTTTAAGTGAGTTATaGAACACGACGAGATCGGCA +
Preference number: 4 (lower is better)
Translates to: VDELEAPRARSQSYENQGLLSEL*NTTRSA
Trigger: TGCCGATCTCGTCGTGTTCCATAACTCACTTAAAAG...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAGCTTTCAGCTGTTCATaGATTTCCTTGACGATTTTG +
Preference number: 4 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPAFSCS*ISLTIL
Trigger: CAAAATCGTCAAGGAAATCCATGAACAGCTGAAAGC...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAAGGGTTGGCTGGCTGCTaGCATAGAGGATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQGLAGC*HRGCLC
Trigger: ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCC...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTGGCTTCAGTTTCCTTTCAAAAGTCTTTTGATTTaGCAAGAGGATACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLQGILWGQRPLWLQFPFKSLLI*QEDTPG
Trigger: CCCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTT...GAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCATTGGTCTTTCTGGCTTaGCCAACTCCTTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: GAENSNALTTCLVFLAWPLVFLA*PTPSLK
Trigger: TTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAA...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGTTGGTCTTTCTGGCTTaGCCAACTCCTTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLLVFLA*PTPSLK
Trigger: TTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAA...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGACATGCTTGGTCTTTCTaGCTTGGCCAACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGHAWSF*LGQLLP
Trigger: AGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATG...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACACCTTCCTAGTACATTaGAATGTCTGCCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENTFLVH*NVCQSG
Trigger: TCCTGATTGGCAGACATTCCAATGTACTAGGAAGGT...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGTGCAAACCTGCCATCTaGAGGCACCGTGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LISGCYSRRSSLIQACYRCKPAI*RHRGRF
Trigger: AAAGCGGCCACGGTGCCTCCAGATGGCAGGTTTGCA...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGGCTTTGGAGAGGTGTaGCAGACATCCTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LISGCYSRRSSLIQACYRGFGEV*QTSLGG
Trigger: GCCACCCAAGGATGTCTGCCACACCTCTCCAAAGCC...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGGGAGGATATCCTGGTaGAATATATCAGGTATATCT +
Preference number: 4 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNGRISW*NISGIS
Trigger: AGATATACCTGATATATTCCACCAGGATATCCTCCC...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCGGGAGGATATCCTGGTaGAATATATCAGGTATATCT +
Preference number: 4 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRAGRISW*NISGIS
Trigger: AGATATACCTGATATATTCCACCAGGATATCCTCCC...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AAGCAGACTGCAAACTCACCAGGACTGGCATTTGTCTTATCCAAGGATCTTTTGATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: KQTANSPGLAFVLSKDLLIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...CAAAAGATCCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTGCAGTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GATTGTCGGAAGCAGTTTTCTTTAAGGAATGTACGGATGATGTTAACAGCACTGACCCCACGGTTGGCTTaGCCACCTCTTCCCTACATT +
Preference number: 4 (lower is better)
Translates to: DCRKQFSLRNVRMMLTALTPRLA*PPLPYI
Trigger: AATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGT...CAGTGCTGTTAACATCATCCGTACATTCCTTAAAGAAAACTGCTTCCGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR CCA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGAGCTCCACAACTTCCTaGTGTCTGCATTGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: VDELEAPRARSQSYENQGSSTTS*CLHCLK
Trigger: TTTTAGACAATGCAGACACCAGGAAGTTGTGGAGCT...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTGTGACAGGTTCTGTTaGCTAGCACTTTCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRCDRFC*LALSPV
Trigger: GACGGGGGAAAGTGCTAGCCAACAGAACCTGTCACA...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAAGCAGCTCAGGGACGTaGTATCTTGAACCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKSSSGT*YLEPSF
Trigger: GAAGGAAGGTTCAAGATACCACGTCCCTGAGCTGCT...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAAGTTCGAGAACATCCTaGCCAACATGCAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGSSRTS*PTCRNP
Trigger: GGGGTTTCTGCATGTTGGCCAGGATGTTCTCGAACT...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680122.1
CDS-3UTR CCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTAGTGACTTCAGAATTTaGGGTCCATCCTATAATACT +
Preference number: 4 (lower is better)
Translates to: IQINEPCINLGAGCGARTSDFRI*GPSYNT
Trigger: AGTATTATAGGATGGACCCCAAATTCTGAAGTCACT...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR CCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATTTTCTCCTGCAGGTCTaGCGATCATTGGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYFLLQV*RSLGEY
Trigger: ATATTCACCCAATGATCGCCAGACCTGCAGGAGAAA...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680138.1
3UTR CAA 72 bp CCAAAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTaGACAATGTCTGAAGACTTTTGGTTGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: PKAERSVNPGER*TMSEDFWLSLG
Trigger: TCCCAGTGACAACCAAAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: YIGMSANQEAPQASLSRVIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp AATACAAATGAAGAGCCAGACAAAGAGTATGTAGGGTGGCAAGCACTGGAAGGGTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: NTNEEPDKEYVGWQALEGYPRIF*ALDRSR
Trigger: CCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATA...CCCTTCCAGTGCTTGCCACCCTACATACTCTTTGTCTGGCTCTTCATTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR TCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTTTTTTCTGGCACTGTTaGTGCCAGTGCTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCFFWHC*CQCFIK
Trigger: CTTGATAAAGCACTGGCATCAACAGTGCCAGAAAAA...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAAGCTTCTCCTGGCATTTaGTCAGCTCCAGTACGGTTC +
Preference number: 4 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQASPGI*SAPVRF
Trigger: GAACCGTACTGGAGCTGATCAAATGCCAGGAGAAGC...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCCTTCAAAGTTGTAGTTaGCCATCCAATAGATACACA +
Preference number: 4 (lower is better)
Translates to: GRKLSSREVRGFIQINEPLQSCS*PSNRYT
Trigger: TGTGTATCTATTGGATGGTCAACTACAACTTTGAAG...GGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCGCAGCAGGATGTTCCTaGTGGTCTCATCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISAAGCS*WSHLQS
Trigger: ACTTTGAAGATGAGACCATCAGGAACATCCTGCTGC...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGGGTGTAGCTTTTAAGTaGGTTATGGAACACGACGAG +
Preference number: 4 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWGVAFK*VMEHDE
Trigger: CTCGTCGTGTTCCATAACTCACTTAAAAGCTACACC...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCGTTCATGGATTTCCTTaGCGATTTTGTGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFVHGFP*RFCAAR
Trigger: ACGAGCGGCACAAAATCGTCAAGGAAATCCATGAAC...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGTTCATGGATTTCCTTaGCGATTTTGTGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISVHGFP*RFCAAR
Trigger: ACGAGCGGCACAAAATCGTCAAGGAAATCCATGAAC...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCGACTCTTTCTCACGGTaGGCCGAGTCTTTAAAAGCG +
Preference number: 4 (lower is better)
Translates to: SWCLHCLKRKTYVGEQCLDSFSR*AESLKA
Trigger: CGCTTTTAAAGACTCGGCTCACCGTGAGAAAGAGTC...GAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 4 (lower is better)
Translates to: AENSNALTTCLVFLAWPTREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: NRQDVDELEAPRARSQSYSLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCSLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: ILVEYIRYILVGREGFGEVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAACTGTTTAAGCTCCTGTaGGCTGGGTTTCCTTTATTT +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILELFKLL*AGFPLF
Trigger: AAATAAAGGAAACCCAGCTCACAGGAGCTTAAACAG...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFTFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp TACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: YIGMSANQEAPQASLSRVTFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...AACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp AAGATCACAGGCCTGGTTTTCTGCAACTGGCTCAGTAGAAACTTCCTCACGGTCAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KITGLVFCNWLSRNFLTVKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...GACCGTGAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGTTGGCTTTTCTCTCCTaGCACCCAGCAATGCTTACT +
Preference number: 4 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKLAFLS*HPAMLT
Trigger: AGTAAGCATTGCTGGGTGTCAGGAGAGAAAAGCCAA...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp GGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGGTCGTTGCCTTGATTTTGTACTCTAACCAACACTaGCTCTGGTCAAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GTPSSFDSYLWKVVALILYSNQH*LWSKPA
Trigger: TGCAGGTTTTGACCAGAGTCAGTGTTGGTTAGAGTA...CAAAATCAAGGCAACGACCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp ACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCGTTCAAATAAGTGTGGGAATGTTTGCTaGGACAGGAGACACAAGAGG +
Preference number: 4 (lower is better)
Translates to: TEFRPIKGGQLFKSRSNKCGNVC*DRRHKR
Trigger: CCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACA...CTTATTTGAACGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp TCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATGAAATCCTGGGCTAGGCTTCTAGATTTGTaGATTGTCTGCTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: SADQQLIMELARNMKSWARLLDL*IVCSVK
Trigger: TTTAACTGAGCAGACAATTCACAAATCTAGAAGCCT...AGCCCAGGATTTCATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp AAATATGAAATCCTGGGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTGTGTTCAAGACTCTCTaGACCTACTCTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KYEILGSNSDLLSQDLHFVFKTL*TYSGSG
Trigger: TCCTGAGCCAGAGTAGGTTCAGAGAGTCTTGAACAC...AAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCCCAGGATTTCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGAAAATCCAGGTTGCTaGGACAGTGTTCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQENPGC*DSVQGN
Trigger: ATTCCCTTGAACACTGTCTCAGCAACCTGGATTTTC...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR GCA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLNCSGS*RTSQMV
Trigger: CACCATCTGTGACGTCCTGCAGGAACCCGAACAGTT...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTTCAGTGAAGCAGACTaGAAACTCACCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRFSEAD*KLTRTG
Trigger: GCCAGTCCTGGTGAGTTTGCAGTCTGCTTCACTGAA...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTGGTCGTGAAGAGTGGTaGAGGCAGAACATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAGREEW*RQNIPR
Trigger: TCTTGGAATGTTCTGCCTGCACCACTCTTCACGACC...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLQSSEL*LWRLIL
Trigger: GAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTG...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQRMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCACAGGCCTGGTTTTCTaGAACTGGCTCAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFTGLVF*NWLSRN
Trigger: GTTTCTACTGAGCCAGTTGCAGAAAACCAGGCCTGT...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680138.1
CDS-3UTR GCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTCTTTTGCCAGAAGATaGCAACACCAACGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRSFARR*QHQRSP
Trigger: AGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGA...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAATTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILEFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp ATACAGATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: IQINEPCINLGAGCGARTKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...AGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSLNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGCTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWLNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GTTCAAATAAGGCCAATGCTGAGCTATAACCAGTCTGGCTGTTTCTGTACCTCAAAGGCAGACTTCAAATaGTTGCCCCAGCTGGACTTT +
Preference number: 4 (lower is better)
Translates to: VQIRPMLSYNQSGCFCTSKADFK*LPQLDF
Trigger: AAAGTCCAGCTGGGGCAAGCATTTGAAGTCTGCCTT...TGAGGTACAGAAACAGCCAGACTGGTTATAGCTCAGCATTGGCCTTATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGTGCAACCTACTCTTGTaGCAATCACTGAGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKCNLLL*QSLSFG
Trigger: GCCGAAACTCAGTGATTGGCACAAGAGTAGGTTGCA...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp GTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACCACTTCGTGTGCAACCTACTCTTGTaGCAATCACTGAGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: VNPSRDFWISKLFFNHFVCNLLL*QSLSFG
Trigger: GCCGAAACTCAGTGATTGGCACAAGAGTAGGTTGCA...CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR GCA 90 bp AAATTGTTTTTCAACCACTTCGTGAACAGACAGAACTTCAGCTTATCCCCAGTTATTATGGCCACTCCCTaGACCAGGGGGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: KLFFNHFVNRQNFSLSPVIMATP*TRGNCS
Trigger: CGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAAT...AACTGGGGATAAGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAAACAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CCA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGCAAACTCACCAGGACTaGCATTTGTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWQTHQD*HLSYPR
Trigger: CCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTG...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CACATGATAAAGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTCTCGCTGATTGGAGCTaGTGCAGCAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: HMIKSQDTFNCHNWVASTLADWS*CSRMFL
Trigger: CAGGAACATCCTGCTGCACCAGCTCCAATCAGCGAG...AGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACTTTATCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGACTGGCCTCGCTGATTaGAGCTGGTGCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQETGLAD*SWCSRM
Trigger: CATCCTGCTGCACCAGCTCCAATCAGCGAGGCCAGT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCACTCACATTATTGGTTaGGTCAACTGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPTHIIG*VNWIQD
Trigger: ATCTTGGATCCAGTTGACCCAACCAATAATGTGAGT...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACACTCACATTATTGGTTaGGTCAACTGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDTHIIG*VNWIQD
Trigger: ATCTTGGATCCAGTTGACCCAACCAATAATGTGAGT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GTTCTGACGCCTTCAGCAATGTCAAAGTTGTCTTTTCTGCACCCCTGTTCCCAGACTCACATTATTGGTTaGGTCAACTGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: VLTPSAMSKLSFLHPCSQTHIIG*VNWIQD
Trigger: ATCTTGGATCCAGTTGACCCAACCAATAATGTGAGT...CTGGGAACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGAAGGCGTCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR CCA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCACTCCACTCACATTATTaGTTGGGTCAACTGGATCCA +
Preference number: 4 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPLHSHY*LGQLDP
Trigger: TGGATCCAGTTGACCCAACCAATAATGTGAGTGGAG...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTACTCATTATCCAGGTTaGGAGAAGTCAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCTHYPG*EKSTRF
Trigger: AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGT...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGTGGGGTCGTGAAGAGTaGTGCAGGCAGAACATTCCA +
Preference number: 4 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLWGREE*CRQNIP
Trigger: TGGAATGTTCTGCCTGCACCACTCTTCACGACCCCA...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTCTTTTAAGTGAGTTATaGAACACGACGAGATCGGCA +
Preference number: 4 (lower is better)
Translates to: DDFYRHFPRWYWVSSPILLLSEL*NTTRSA
Trigger: TGCCGATCTCGTCGTGTTCCATAACTCACTTAAAAG...AAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTGCTTTCAGCTGTTCATaGATTTCCTTGACGATTTTG +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCAFSCS*ISLTIL
Trigger: CAAAATCGTCAAGGAAATCCATGAACAGCTGAAAGC...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACAAAAGTCTTTTGATTTaGCAAGAGGATACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QDVDELEAPRARSQSYENKSLLI*QEDTPG
Trigger: CCCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTT...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTATTGGTCTTTCTGGCTTaGCCAACTCCTTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVLVFLA*PTPSLK
Trigger: TTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAA...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AATACAAATGAAGAGCCAGACAAAGAGTATGTAGGGTGGCAAGCACTGGAAGGGATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NTNEEPDKEYVGWQALEGMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...CCCTTCCAGTGCTTGCCACCCTACATACTCTTTGTCTGGCTCTTCATTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392583.7
CDS-3UTR CCA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTGGGAGGATATCCTGGTaGAATATATCAGGTATATCT +
Preference number: 4 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCGRISW*NISGIS
Trigger: AGATATACCTGATATATTCCACCAGGATATCCTCCC...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVRTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGAGAACCAAGTATATCTaGAGGGAGGATATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQRTKYI*REDILV
Trigger: CACCAGGATATCCTCCCTCCAGATATACTTGGTTCT...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCATTGTCACAACTGGGTaGCATCTACTGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: SWCLHCLKRKTYVGEQCLIVTTG*HLLGTG
Trigger: GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT...GAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCATTTAATTGTCACAACTaGGTGGCATCTACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: FYRHFPRWYWVSSPILEAFNCHN*VASTGY
Trigger: GTACCCAGTAGATGCCACCCAGTTGTGACAATTAAA...TGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGAGGAGACACAAGAGGTaGGCAGGTCTTAGGGATTTA +
Preference number: 4 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKRRHKR*AGLRDL
Trigger: TAAATCCCTAAGACCTGCCCACCTCTTGTGTCTCCT...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp CATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGTCTCTGAACCTACTCTaGCTCAGGAGGCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: HFLQRQSGYGGEVSSREESLNLL*LRRLLD
Trigger: ATCTAGAAGCCTCCTGAGCCAGAGTAGGTTCAGAGA...CTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTGATAGATCCAGGGGCTaGGATTATCATTTAAGCTAT +
Preference number: 4 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASDRSRG*DYHLSY
Trigger: ATAGCTTAAATGATAATCCCAGCCCCTGGATCTATC...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS-3UTR CCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTAGCAGCTCAGGGACGTaGTATCTTGAACCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFSSSGT*YLEPSF
Trigger: GAAGGAAGGTTCAAGATACCACGTCCCTGAGCTGCT...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp TTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGCGAGAATGTTTTGTTTCTaGATTATGGCCACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FSKDNQGMGEKLVPEKRARMFCF*IMATPC
Trigger: GCAGGGAGTGGCCATAATCCAGAAACAAAACATTCT...CGCTCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR TCA 90 bp TTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: FYRHFPRWYWVSSPILEAIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...TGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: KAERSVNPGERLTMSEDFYPRIF*ALDRSR
Trigger: CCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATA...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAAGAAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTTTTTCTGGCACTGTTaGTGCCAGTGCTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: KERTWWREPSISGGRISWFFWHC*CQCFIK
Trigger: CTTGATAAAGCACTGGCATCAACAGTGCCAGAAAAA...CCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCCTTCAAAGTTGTAGTTaGCCATCCAATAGATACACA +
Preference number: 4 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPLQSCS*PSNRYT
Trigger: TGTGTATCTATTGGATGGTCAACTACAACTTTGAAG...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTGTTCATGGATTTCCTTaGCGATTTTGTGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAVHGFP*RFCAAR
Trigger: ACGAGCGGCACAAAATCGTCAAGGAAATCCATGAAC...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGTGGGAGGCTCAAAGCTaGCTTCAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEWEAQS*LQAPPP
Trigger: AGGAGGAGGAGCTTGAAGTCAGCTTTGAGCCTCCCA...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAATCTATGGCTTCTGGATaGGAACATCTCATTGACAAT +
Preference number: 4 (lower is better)
Translates to: RPEMLLNILQCTREPPNKSMASG*EHLIDN
Trigger: ATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGA...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGAAGAATGGATGTGAGTaGCTCTTTCTCACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KSLAMLKLNSISSPITSLKNGCE*LFLTVS
Trigger: GCTCACCGTGAGAAAGAGTCACTCACATCCATTCTT...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAAGGGAAGAATGGATGTaGGTGACTCTTTCTCACGGT +
Preference number: 4 (lower is better)
Translates to: HNFLVSALSKKKNIRGRAREEWM*VTLSHG
Trigger: ACCGTGAGAAAGAGTCACTCACATCCATTCTTCCCT...TGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVSLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCGAAAAGGGCTTGTTATaGATACAAAAGACACTCCTA +
Preference number: 4 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVEKGLL*IQKTLL
Trigger: TAGGAGTGTCTTTTGTATTCATAACAAGCCCTTTTC...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR TCA 90 bp TACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACGAAAAGGGCTTGTTATaGATACAAAAGACACTCCTA +
Preference number: 4 (lower is better)
Translates to: YRPEMLLNILQCTREPPNEKGLL*IQKTLL
Trigger: TAGGAGTGTCTTTTGTATTCATAACAAGCCCTTTTC...GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACGAAAAGGGCTTGTTATaGATACAAAAGACACTCCTA +
Preference number: 4 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDEKGLL*IQKTLL
Trigger: TAGGAGTGTCTTTTGTATTCATAACAAGCCCTTTTC...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGCTAACTCAGACCTCCTaGGTCAGGATCTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: HFLQRQSGYGGEVSSREELTQTS*VRICIL
Trigger: TAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAG...CTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGGGTACCATCGGAGTTaGCTCTTAAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDGYHRS*LLRLFS
Trigger: GGAAAACAGTCTTAAGAGGCAACTCCGATGGTACCC...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: AENSNALTTCLVFLAWPTRMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGCACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTATTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAATCTTTTCCTTCTTCCTaGTTGGATTGCAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKSFPSS*LDCKPA
Trigger: GGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAAAGA...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCACTCAACATCCTACAATaGACAAGAGAGCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISLNILQ*TREPPN
Trigger: GTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAG...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TGTTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAGGCACCGAGGACAGCTaGGACTCCCCATTTCCCATT +
Preference number: 4 (lower is better)
Translates to: CSYSLDVSNSNLLVGFKVGTEDS*DSPFPI
Trigger: AATGGGAAATGGGGAGTCCCAGCTGTCCTCGGTGCC...TACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp GGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTAACAAGGTTCCAGGTCCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GSNSDLLSQDLHFNKVPGPSRDF*ISKLFF
Trigger: GAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGG...ACCTGGAACCTTGTTAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGGATAGATCCAGGGGCTaGGATTATCATTTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLAMLKLNSISSPITSLEDRSRG*DYHLSS
Trigger: TGAGCTTAAATGATAATCCCAGCCCCTGGATCTATC...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCGATAGATCCAGGGGCTaGGATTATCATTTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRSSLIQACYRAISRQRLDRSRG*DYHLSS
Trigger: TGAGCTTAAATGATAATCCCAGCCCCTGGATCTATC...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISIGWVN*IQDYWP
Trigger: AGGCCAGTAATCTTGGATCCAGTTGACCCAACCAAT...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAACTCACATTATTGGTTaGGTCAACTGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILETHIIG*VNWIQD
Trigger: ATCTTGGATCCAGTTGACCCAACCAATAATGTGAGT...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGACTCATTATCCAGGTTaGGAGAAGTCAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQTHYPG*EKSTRF
Trigger: AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGT...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGTGGGGTCGTGAAGAGTaGTGCAGGCAGAACATTCCA +
Preference number: 4 (lower is better)
Translates to: LISGCYSRRSSLIQACYRWGREE*CRQNIP
Trigger: TGGAATGTTCTGCCTGCACCACTCTTCACGACCCCA...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAACTCAGAGCTGTGCCTTTaGCGGTTGATCCTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: FLQLRCQQLKFTSRVQSNSELCL*RLILPG
Trigger: TCCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGA...GTTACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCTTTCAGCTGTTCATaGATTTCCTTGACGATTTTG +
Preference number: 4 (lower is better)
Translates to: DFYRHFPRWYWVSSPILEAFSCS*ISLTIL
Trigger: CAAAATCGTCAAGGAAATCCATGAACAGCTGAAAGC...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAACAGAAGCTCAGCACCCTaGGAGCCTTCCACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: FLQLRCQQLKFTSRVQSNRSSAP*EPSTWE
Trigger: CTCCCAAGTGGAAGGCTCCCAGGGTGCTGAGCTTCT...GTTACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp GATGAGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: DENISLTIGWILAPQLPGLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...ACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: KAERSVNPGERLTMSEDFLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACAAAAGTCTTTTGATTTaGCAAGAGGATACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHKSLLI*QEDTPG
Trigger: CCCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTT...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCTTGGTCTTTCTGGCTTaGCCAACTCCTTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISLVFLA*PTPSLK
Trigger: TTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAA...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTTTCCTTCTTCCTGCTTaGATTGCAAACCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: AENSNALTTCLVFLAWPTFLLPA*IANLPS
Trigger: AGATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAA...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGGGAGGGAGGATATCCTaGTGGAATATATCAGGTATA +
Preference number: 4 (lower is better)
Translates to: ILVEYIRYILVGREGFGEGGRIS*WNISGI
Trigger: TATACCTGATATATTCCACCAGGATATCCTCCCTCC...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGTTTAATTGTCACAACTaGGTGGCATCTACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: ILVEYIRYILVGREGFGEFNCHN*VASTGY
Trigger: GTACCCAGTAGATGCCACCCAGTTGTGACAATTAAA...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp CTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCAATATGCAAGAGTGTaGGAATGTTTGCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: LVPITEFRPIKGGQLFKSQYARV*ECLLRQ
Trigger: CTGTCTCAGCAAACATTCCCACACTCTTGCATATTG...AGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp ACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCGTTCAAATAAGTCGGCCAATCAAAGGTaGCCAACTGTTCAAATCTCG +
Preference number: 4 (lower is better)
Translates to: TEFRPIKGGQLFKSRSNKSANQR*PTVQIS
Trigger: CGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGA...CTTATTTGAACGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCAAGTGACTTCAGAATTTaGGGTCCATCCTATAATACT +
Preference number: 4 (lower is better)
Translates to: NHSFASFARRCQHQRSPPSDFRI*GPSYNT
Trigger: AGTATTATAGGATGGACCCCAAATTCTGAAGTCACT...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR TCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAATTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCTTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCTTTTTCTGGCACTGTTaGTGCCAGTGCTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFFFWHC*CQCFIK
Trigger: CTTGATAAAGCACTGGCATCAACAGTGCCAGAAAAA...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGACTTCAAAGTTGTAGTTaGCCATCCAATAGATACACA +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGLQSCS*PSNRYT
Trigger: TGTGTATCTATTGGATGGTCAACTACAACTTTGAAG...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAGAAAAGGGCTTGTTATaGATACAAAAGACACTCCTA +
Preference number: 4 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGEKGLL*IQKTLL
Trigger: TAGGAGTGTCTTTTGTATTCATAACAAGCCCTTTTC...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTACGTTTGACAATGTCTaGAGACTTTTGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSTFDNV*RLLVVT
Trigger: AGTGACAACCAAAAGTCTTCAGACATTGTCAAACGT...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp ACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCGTTCAAATAAGTACTCTAACCAACACTaGCTCTGGTCAAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: TEFRPIKGGQLFKSRSNKYSNQH*LWSKPA
Trigger: TGCAGGTTTTGACCAGAGTCAGTGTTGGTTAGAGTA...CTTATTTGAACGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTGAATATCCATAATTaGGGTACAGGGTTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQVNIHN*GTGLVN
Trigger: GTTTACCAACCCTGTACCTCAATTATGGATATTCAC...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATAAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLINCSGS*RTSQMV
Trigger: CACCATCTGTGACGTCCTGCAGGAACCCGAACAGTT...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: KSLAMLKLNSISSPITSLRMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAATTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp CATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGTCTATGGAAGGTCGTTaGCTTGATTTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: HFLQRQSGYGGEVSSREESMEGR*LDFDLV
Trigger: TACCAGGTCAAAATCAAGGCAACGACCTTCCATAGA...CTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR GCA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTAATCAAATACAATGTTaGCAAGAACCCAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPNQIQC*QEPRVG
Trigger: GCCTACCCTGGGTTCTTGGCAACATTGTATTTGATT...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680122.1
CDS-3UTR GCA 90 bp GACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGAGGCAATTATTCTCCTaGCTTTTATACATGAACAAC +
Preference number: 4 (lower is better)
Translates to: DCETGRKLSSREVRGFIQRQLFS*LLYMNN
Trigger: GTTGTTCATGTATAAAAGGCAGGAGAATAATTGCCT...CTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR GCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCGGTTGATCCTCCCTaGTTCTCAGGTCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: LISGCYSRRSSLIQACYRAVDPP*FSGQFP
Trigger: AGGAAATTGACCTGAGAAGCAGGGAGGATCAACCGC...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680138.1
CDS-3UTR CCA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSELISGCYSRRSSLIQAGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEAGRHR*CSPSRR
Trigger: TCGACGAGATGGTGAACACCATCTGTGACGTCCTGC...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTACCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVPSRDF*ISKLFF
Trigger: GAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGG...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCGATAGATCCAGGGGCTaGGATTATCATTTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GCYSRRSSLIQACYRAISDRSRG*DYHLSS
Trigger: TGAGCTTAAATGATAATCCCAGCCCCTGGATCTATC...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGATAGATCCAGGGGCTaGGATTATCATTTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKDRSRG*DYHLSS
Trigger: TGAGCTTAAATGATAATCCCAGCCCCTGGATCTATC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTCAAACTCACCAGGACTaGCATTTGTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFQTHQD*HLSYPR
Trigger: CCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTG...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTCTTTTAAGTGAGTTATaGAACACGACGAGATCGGCA +
Preference number: 4 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFLLSEL*NTTRSA
Trigger: TGCCGATCTCGTCGTGTTCCATAACTCACTTAAAAG...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGCTTTCAGCTGTTCATaGATTTCCTTGACGATTTTG +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQAFSCS*ISLTIL
Trigger: CAAAATCGTCAAGGAAATCCATGAACAGCTGAAAGC...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTCTGGTTTTCTGCAACTaGCTCAGTAGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSLVFCN*LSRNFL
Trigger: GAGGAAGTTTCTACTGAGCCAGTTGCAGAAAACCAG...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATACGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLIRHFPR*YWVSSP
Trigger: GGGACTGGAAACCCAATACCACCTTGGAAAGTGCCG...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTACCTTCCTAGTACATTaGAATGTCTGCCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: KAERSVNPGERLTMSEDFTFLVH*NVCQSG
Trigger: TCCTGATTGGCAGACATTCCAATGTACTAGGAAGGT...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATATGTCTGAAGACTTTTaGTTGTCACTGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDMSEDF*LSLGEE
Trigger: CTCCTCTCCCAGTGACAACCAAAAGTCTTCAGACAT...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGGGAGGATATCCTGGTaGAATATATCAGGTATATCT +
Preference number: 4 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQGRISW*NISGIS
Trigger: AGATATACCTGATATATTCCACCAGGATATCCTCCC...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGGTCGTTGCCTTGATTTTGTTTTTAAAGCAGCAGTaGTATCTATCCCACTCATGG +
Preference number: 4 (lower is better)
Translates to: GTPSSFDSYLWKVVALILFLKQQ*YLSHSW
Trigger: CCATGAGTGGGATAGATACCACTGCTGCTTTAAAAA...CAAAATCAAGGCAACGACCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp ACCTGGATGGTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACCAATATGCAAGAGTGTaGGAATGTTTGCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: TWMVNPSRDFWISKLFFNQYARV*ECLLRQ
Trigger: CTGTCTCAGCAAACATTCCCACACTCTTGCATATTG...GTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCACCATCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CCA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATTTTCTCCTGCAGGTCTaGCGATCATTGGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDFLLQV*RSLGEY
Trigger: ATATTCACCCAATGATCGCCAGACCTGCAGGAGAAA...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
3UTR CAA 72 bp TTCAGGATTCTATGGCTTCTGGATGAGAACATCTCATaGACAATAGGATGGATCCTAGCTCCACAACTTCCT +
Preference number: 4 (lower is better)
Translates to: FRILWLLDENIS*TIGWILAPQLP
Trigger: AGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGAATCCTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTTTTTCAACCACTTCGTaGACAGACAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSFSTTS*TDRTSA
Trigger: AGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAA...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 4 (lower is better)
Translates to: KSLAMLKLNSISSPITSLIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGATCTATGGCTTCTGGATaGGAACATCTCATTGACAAT +
Preference number: 4 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGSMASG*EHLIDN
Trigger: ATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGA...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAAAGGGTTTGCAGTCTTaGTTGATTTCAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISKGLQS*LISRSP
Trigger: TGGACTTCTTGAAATCAATCAAGACTGCAAACCCTT...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KAERSVNPGERLTMSEDFKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAAAATCACTGTGTTCTTaGCCTTTGGGTATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISKSLCS*PLGIFS
Trigger: GGAAAAGATACCCAAAGGTCAAGAACACAGTGATTT...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp AAATTGTTTTTCAACCACTTCGTGAACAGACAGAACTTCAGCTTATCCCCAGTTCCTGTAGGTTCCTTTTaGGTGCCTAGCTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: KLFFNHFVNRQNFSLSPVPVGSF*VPSYLL
Trigger: AAGCAAGTAGCTAGGCACTCAAAAGGAACCTACAGG...AACTGGGGATAAGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAAACAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR TCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTCCTGCCTTTTATACATaGACAACTGATGGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSPAFYT*TTDGLV
Trigger: AACTAGCCCATCAGTTGTTCATGTATAAAAGGCAGG...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR GCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGGGTCGTGAAGAGTGGTaGAGGCAGAACATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEGREEW*RQNIPR
Trigger: TCTTGGAATGTTCTGCCTGCACCACTCTTCACGACC...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGACAGCACTGTCAATCTaGTCTAGGAAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRTALSI*SRKHLL
Trigger: CAACAAATGCTTCCTAGAGCAGATTGACAGTGCTGT...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTCACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 4 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp CACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCACACTCTTTGTACCAGTaGTTCACCAGGCGAATTAAA +
Preference number: 4 (lower is better)
Translates to: HNFLVSALSKKKNIRGRAHSLYQ*FTRRIK
Trigger: TTTAATTCGCCTGGTGAAGCACTGGTACAAAGAGTG...TGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGATGTGTGTTTTCTCCTaGAGGTCTGGCGATCATTGG +
Preference number: 4 (lower is better)
Translates to: LISGCYSRRSSLIQACYRMCVFS*RSGDHW
Trigger: CCAATGATCGCCAGACCTGCAGGAGAAAACACACAT...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAACCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKPSRDF*ISKLFF
Trigger: GAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGG...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSELISGCYSRRSSLIQAIGWVN*IQDYWP
Trigger: AGGCCAGTAATCTTGGATCCAGTTGACCCAACCAAT...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCACTCACATTATTGGTTaGGTCAACTGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFTHIIG*VNWIQD
Trigger: ATCTTGGATCCAGTTGACCCAACCAATAATGTGAGT...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGACTCATTATCCAGGTTaGGAGAAGTCAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRTHYPG*EKSTRF
Trigger: AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGT...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp TCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTTTTAAGTGAGTTATaGAACACGACGAGATCGGCA +
Preference number: 4 (lower is better)
Translates to: SWCLHCLKRKTYVGEQCLLLSEL*NTTRSA
Trigger: TGCCGATCTCGTCGTGTTCCATAACTCACTTAAAAG...GAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGCTTTCAGCTGTTCATaGATTTCCTTGACGATTTTG +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISAFSCS*ISLTIL
Trigger: CAAAATCGTCAAGGAAATCCATGAACAGCTGAAAGC...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTAAAAGTCTTTTGATTTaGCAAGAGGATACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPKSLLI*QEDTPG
Trigger: CCCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTT...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTGGAGGGAGGATATCCTaGTGGAATATATCAGGTATA +
Preference number: 4 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAGGRIS*WNISGI
Trigger: TATACCTGATATATTCCACCAGGATATCCTCCCTCC...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAAGAAAGAACCTGGTaGAGAGAACCAAGTATATCT +
Preference number: 4 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVKERTW*REPSIS
Trigger: AGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACCACTTCGTGTTTTTAAAGCAGCAGTaGTATCTATCCCACTCATGG +
Preference number: 4 (lower is better)
Translates to: VNPSRDFWISKLFFNHFVFLKQQ*YLSHSW
Trigger: CCATGAGTGGGATAGATACCACTGCTGCTTTAAAAA...CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CCA 90 bp TTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGCGTTTGATAGTTATCTATaGAAGGTCGTTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: FSKDNQGMGEKLVPEKRAFDSYL*KVVALI
Trigger: AATCAAGGCAACGACCTTCCATAGATAACTATCAAA...CGCTCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp ACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTCGTTCAAATAAGATTGTTTTAAGTCACTaGAGAAGAGGACAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: TEFRPIKGGQLFKSRSNKIVLSH*RRGQGY
Trigger: GTACCCTTGTCCTCTTCTTCAGTGACTTAAAACAAT...CTTATTTGAACGAGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAACTTCAAAGTTGTAGTTaGCCATCCAATAGATACACA +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKLQSCS*PSNRYT
Trigger: TGTGTATCTATTGGATGGTCAACTACAACTTTGAAG...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp ACCTGGATGGTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACAGGCTTCTAGATTTGTaGATTGTCTGCTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: TWMVNPSRDFWISKLFFNRLLDL*IVCSVK
Trigger: TTTAACTGAGCAGACAATTCACAAATCTAGAAGCCT...GTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCACCATCCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR TCA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTGTGAATATCCATAATTaGGGTACAGGGTTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAVNIHN*GTGLVN
Trigger: GTTTACCAACCCTGTACCTCAATTATGGATATTCAC...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS-3UTR GCA 90 bp GATGAGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: DENISLTIGWILAPQLPGESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...ACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LEAPRARSQSYENQGESKESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCAAAGTTGAGAAATCCTaGTTTAAAGAAAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: RRSSLIQACYRAISRQRLKVEKS*FKERTW
Trigger: CCAGGTTCTTTCTTTAAAGCAGGATTTCTCAACTTT...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CCA 90 bp AAATATGAAATCCTGGGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTCCATCAAGGGACTTCTaGATCTCGAAATTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: KYEILGSNSDLLSQDLHFPSRDF*ISKLFF
Trigger: GAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGG...AAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCCCAGGATTTCATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CCA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGGATAGATCCAGGGGCTaGGATTATCATTTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLDRSRG*DYHLSS
Trigger: TGAGCTTAAATGATAATCCCAGCCCCTGGATCTATC...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTGCTTTCAGCTGTTCATaGATTTCCTTGACGATTTTG +
Preference number: 4 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFAFSCS*ISLTIL
Trigger: CAAAATCGTCAAGGAAATCCATGAACAGCTGAAAGC...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAAAAGAAAGAACCTGGTaGAGAGAACCAAGTATATCT +
Preference number: 4 (lower is better)
Translates to: WWREPSISGGRISWWNISKERTW*REPSIS
Trigger: AGATATACTTGGTTCTCTCCACCAGGTTCTTTCTTT...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLTTVII*AFGELE
Trigger: TTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGT...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGCGAATGAAGTTTCGCTaGAGGACTGTGAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQERMKFR*RTVKQV
Trigger: TACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCG...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAAAGTAAAGAGCTTTaGTTTGAAGACACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: KSLAMLKLNSISSPITSLESKEL*FEDTED
Trigger: ATCCTCTGTGTCTTCAAAGCAAAGCTCTTTACTTTC...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TGTTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAGGCTTCAGGTATTCCTaGATAAACCAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CSYSLDVSNSNLLVGFKVGFRYS*INQPSF
Trigger: GAAGCTGGGTTGGTTTATCCAGGAATACCTGAAGCC...TACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGCAAACTCACCAGGACTaGCATTTGTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEQTHQD*HLSYPR
Trigger: CCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTG...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATAATACACAGCTTCTCCTaGCATTTGATCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLIIHSFS*HLISSS
Trigger: ACTGGAGCTGATCAAATGCCAGGAGAAGCTGTGTAT...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGCTCCACTCACATTATTaGTTGGGTCAACTGGATCCA +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQELHSHY*LGQLDP
Trigger: TGGATCCAGTTGACCCAACCAATAATGTGAGTGGAG...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp GTTCAAATAAGGCCAATGCTGAGCTATAACCAGTCTGGCTGTTTCTGTACCTCATTTGATAGTTATCTATaGAAGGTCGTTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: VQIRPMLSYNQSGCFCTSFDSYL*KVVALI
Trigger: AATCAAGGCAACGACCTTCCATAGATAACTATCAAA...TGAGGTACAGAAACAGCCAGACTGGTTATAGCTCAGCATTGGCCTTATTTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
3UTR CAA 72 bp GAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGGGCTATTTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: ELISGCYSRRSS*IQACYRAISRQ
Trigger: TTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR TCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGTTTTTCTGGCACTGTTaGTGCCAGTGCTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEFFWHC*CQCFIK
Trigger: CTTGATAAAGCACTGGCATCAACAGTGCCAGAAAAA...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGATTTATACAGATCAATaGGCCCTGCATAAACCTCGG +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQEIYTDQ*ALHKPR
Trigger: CCGAGGTTTATGCAGGGCTCATTGATCTGTATAAAT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGAGCCTTTGGAGAGCTTaGAGTTCTAATGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQESLWRA*SSNERV
Trigger: AACCCTTTCATTAGAACTTCAAGCTCTCCAAAGGCT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAACGTAGGAGAAGTTCTTTaGTTCAAGCCTGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: FLQLRCQQLKFTSRVQSNVGEVL*FKPVTG
Trigger: CCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTAC...GTTACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR GCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGAATCAAATACAATGTTaGCAAGAACCCAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQENQIQC*QEPRVG
Trigger: GCCTACCCTGGGTTCTTGGCAACATTGTATTTGATT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CCA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGACTCATTATCCAGGTTaGGAGAAGTCAACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQETHYPG*EKSTRF
Trigger: AAACCTGGTTGACTTCTCCCAACCTGGATAATGAGT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATAGGAGGGAGGATATCCTaGTGGAATATATCAGGTATA +
Preference number: 4 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLIGGRIS*WNISGI
Trigger: TATACCTGATATATTCCACCAGGATATCCTCCCTCC...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATATTTAATTGTCACAACTaGGTGGCATCTACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLIFNCHN*VASTGY
Trigger: GTACCCAGTAGATGCCACCCAGTTGTGACAATTAAA...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR TCA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATAACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLITTVII*AFGELE
Trigger: TTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGT...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR GCA 90 bp TTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAACTTCCTTTGCTTCTTTTaGCAGAAGATGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: FLQLRCQQLKFTSRVQSNFLCFF*QKMPTP
Trigger: TGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAA...GTTACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
3UTR CAA 72 bp GAAGGAGGAATGCGCCATTCTTTGTTAGTGTCTTCGTaGATAAGAAATTCTAAGGAGCTGTCATTAAAATTG +
Preference number: 4 (lower is better)
Translates to: EGGMRHSLLVSS*IRNSKELSLKL
Trigger: CAATTTTAATGACAGCTCCTTAGAATTTCTTATCAACGAAGACACTAACAAAGAATGGCGCATTCCTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR TCA 90 bp ATTGTATTTGCCAAAAGCGTTTTGAAAGCTGTTAATTGCTATACTCATGAAGGCACAACAGTTATAATCTaGGCCTTTGGAGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: IVFAKSVLKAVNCYTHEGTTVII*AFGELE
Trigger: TTCAAGCTCTCCAAAGGCTCAGATTATAACTGTTGT...GCCTTCATGAGTATAGCAATTAACAGCTTTCAAAACGCTTTTGGCAAATACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS GCA 90 bp ACCCAGCACCCAGTAGCTCGGCCTTGCTGCCGCCGTGGAATCTCCTaGCTCCCAGAGACCCAACCTCAGCCCTGGACTCACTATGGCCAC +
Preference number: 5 (lower is better)
Translates to: TQHPVARPCCRRGIS*LPETQPQPWTHYGH
Trigger: GTGGCCATAGTGAGTCCAGGGCTGAGGTTGGGTCTCTGGGAGGCAGGAGATTCCACGGCGGCAGCAAGGCCGAGCTACTGGGTGCTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 90 bp GCCTCGCACATAATAGGCACCCAGCACCCAGTAGCTCGGCCTTGCTaGCGCCGTGGAATCTCCTGCCTCCCAGAGACCCAACCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: ASHIIGTQHPVARPC*RRGISCLPETQPQP
Trigger: GGGCTGAGGTTGGGTCTCTGGGAGGCAGGAGATTCCACGGCGGCAGCAAGGCCGAGCTACTGGGTGCTGGGTGCCTATTATGTGCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 90 bp TGGGCCTCGCACATAATAGGCACCCAGCACCCAGTAGCTCGGCCTTaGTGCCGCCGTGGAATCTCCTGCCTCCCAGAGACCCAACCTCAG +
Preference number: 5 (lower is better)
Translates to: WASHIIGTQHPVARP*CRRGISCLPETQPQ
Trigger: CTGAGGTTGGGTCTCTGGGAGGCAGGAGATTCCACGGCGGCAGCAAGGCCGAGCTACTGGGTGCTGGGTGCCTATTATGTGCGAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS-3UTR CAA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCCTGGGAGCCTTCCACTaGGGAGGCTCAAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGLGAFH*GGSKLT
Trigger: AGTCAGCTTTGAGCCTCCCAAGTGGAAGGCTCCCAG...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCA +
Preference number: 5 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVVWQTS*GGQCNP
Trigger: TGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS TCA 90 bp TGCCCAGTGTCACACAGCTCTGGAGCAAGCGCCTGCTCCAGAGCCTaGGACTCCTACACCACATCCCACCCAAGTGTGGGCCTCGCACAT +
Preference number: 5 (lower is better)
Translates to: CPVSHSSGASACSRA*DSYTTSHPSVGLAH
Trigger: ATGTGCGAGGCCCACACTTGGGTGGGATGTGGTGTAGGAGTCTCAGGCTCTGGAGCAGGCGCTTGCTCCAGAGCTGTGTGACACTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 90 bp TCCCAGAGACCCAACCTCAGCCCTGGACTCACTATGGCCACTCCCTaGACCAGGGGGAACTGTTCGGGTTCCTGCAGGACGTCACAGATG +
Preference number: 5 (lower is better)
Translates to: SQRPNLSPGLTMATP*TRGNCSGSCRTSQM
Trigger: CATCTGTGACGTCCTGCAGGAACCCGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGTGAGTCCAGGGCTGAGGTTGGGTCTCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CCA 90 bp CCTGCTCCAGAGCCTGAGACTCCTACACCACATCCCACCCAAGTGTaGGCCTCGCACATAATAGGCACCCAGCACCCAGTAGCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: PAPEPETPTPHPTQV*ASHIIGTQHPVARP
Trigger: AGGCCGAGCTACTGGGTGCTGGGTGCCTATTATGTGCGAGGCCCACACTTGGGTGGGATGTGGTGTAGGAGTCTCAGGCTCTGGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS-3UTR CAA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGCTGTGCCTTTGGCGGTaGATCCTCCCCGGACAATCT +
Preference number: 5 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLLCLWR*ILPGQS
Trigger: AGATTGTCCGGGGAGGATCAACCGCCAAAGGCACAG...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp CGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCCAAGATCACAGGCTTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 5 (lower is better)
Translates to: RSPPPTSPVGSAGSKITGFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...GCCTGTGATCTTGGACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCGAGCTAACCCCACGGTaGGCTTGGCCACCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPELTPR*AWPPLP
Trigger: GGGAAGAGGTGGCCAAGCCAACCGTGGGGTTAGCTC...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
CDS GCA 90 bp CTTCTGAGCAGGCACCGAGGACAGCTGGGACTCCCCATTTCCCATTaGTCTCAGCTGGCTGCCGGCAAGACAGTGAATGGTAGGATGGGA +
Preference number: 5 (lower is better)
Translates to: LLSRHRGQLGLPISH*SQLAAGKTVNGRMG
Trigger: TCCCATCCTACCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAATGGGAAATGGGGAGTCCCAGCTGTCCTCGGTGCCTGCTCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000449768.2
ENST00000551603.2
ENST00000552756.6
ENST00000680138.1
ENST00000680514.1
ENST00000680685.1
ENST00000681673.1
CDS GCA 90 bp CCACCTATGGCCACTCCCTGCACCAGGGGGAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTGTTCACCATCTCGTCGATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: PPMATPCTRGNCSGS*RTSQMVFTISSISV
Trigger: GACACTGATCGACGAGATGGTGAACACCATCTGTGACGTCCTGCAGGAACCCGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000449768.2
ENST00000551603.2
ENST00000552756.6
ENST00000620097.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
ENST00000680898.1
ENST00000681673.1
CDS-3UTR CAA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTTTTAAGCTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVFKLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAAA...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGTTCAGAGCTGTGCCTTaGGCGGTTGATCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: INEPCINLGAGCGARTQLFRAVP*AVDPPR
Trigger: CCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAA...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS GCA 90 bp CTCACTATGGCCACTCCCTGCACCAGGGGGAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTGTTCACCATCTCGTCGATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LTMATPCTRGNCSGS*RTSQMVFTISSISV
Trigger: GACACTGATCGACGAGATGGTGAACACCATCTGTGACGTCCTGCAGGAACCCGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS-3UTR CAA 90 bp GTGTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGCTGTGCCTTTGGCGGTaGATCCTCCCCGGACAATCT +
Preference number: 5 (lower is better)
Translates to: VWQTSLGGQCNPRPQSSLLCLWR*ILPGQS
Trigger: AGATTGTCCGGGGAGGATCAACCGCCAAAGGCACAG...CAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp CAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCCATTGTTTTTGTCCCTaGCTGGTGGCCCTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: QKMPTPTVPSTHVTCGFGHCFCP*LVALSR
Trigger: TCTGCTTAGGGCCACCAGCAAGGGACAAAAACAATG...GCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS TCA 90 bp AGAGGTATGCCTGGCATGCGGATGATGAGGTACAGGGATAGGGTGTaGGAAGCTTGGCACCTCGCTGATTGGAGCTGGTGCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: RGMPGMRMMRYRDRV*EAWHLADWSWCSRM
Trigger: CATCCTGCTGCACCAGCTCCAATCAGCGAGGTGCCAAGCTTCTCACACCCTATCCCTGTACCTCATCATCCGCATGCCAGGCATACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS GCA 90 bp TGGATTATGGCCACTCCCTGCACCAGGGGGAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTGTTCACCATCTCGTCGATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: WIMATPCTRGNCSGS*RTSQMVFTISSISV
Trigger: GACACTGATCGACGAGATGGTGAACACCATCTGTGACGTCCTGCAGGAACCCGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CAA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTTTAAGCTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSFKLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAAA...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCAGCAATGTCAAAGTaGTCTTTTCTGCACCCCTGT +
Preference number: 5 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGSAMSK*SFLHPC
Trigger: ACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGA...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGCACTCACATTATTGGTaGGGTCAACTGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: RCQHQRSPPPTSPVGSAGHSHYW*GQLDPR
Trigger: TCTTGGATCCAGTTGACCCAACCAATAATGTGAGTG...CCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTCTAGGAAGCATTTGTaGGGCTGGAGAAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: QKMPTPTVPSTHVTCGFGSRKHL*GWRNSL
Trigger: CAAGGAGTTTCTCCAGCCCAACAAATGCTTCCTAGA...GCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGTCTAGGAAGCATTTGTaGGGCTGGAGAAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLSRKHL*GWRNSL
Trigger: CAAGGAGTTTCTCCAGCCCAACAAATGCTTCCTAGA...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGATTCAGAGCTGTGCCTTaGGCGGTTGATCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGFRAVP*AVDPPR
Trigger: CCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAA...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGTGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 5 (lower is better)
Translates to: GRHPWVASATHVHSHLCSAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCA +
Preference number: 5 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGVWQTS*GGQCNP
Trigger: TGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS CCA 90 bp CCTGCACCAGGGGGAACTGTTCGGGTTCCTGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGATCAGTGTCTGACATTCTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: PAPGGTVRVPAGRHR*CSPSRRSVSDILRR
Trigger: CCTACGAAGAATGTCAGACACTGATCGACGAGATGGTGAACACCATCTGTGACGTCCTGCAGGAACCCGAACAGTTCCCCCTGGTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000449768.2
ENST00000551603.2
ENST00000552756.6
ENST00000620097.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
ENST00000680666.1
ENST00000680685.1
ENST00000680898.1
ENST00000681673.1
CDS-3UTR CAA 90 bp GACACCCAGCAATGCTTACTCAGAGCGTTGAAGGCGGCCAGCACCTCGAAAGAGCGAGCTTACCAACTCTaGTATCCGGGACAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: DTQQCLLRALKAASTSKERAYQL*YPGQGN
Trigger: GTTTCCCTGTCCCGGATACAAGAGTTGGTAAGCTCG...CTCTTTCGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGCATTGCTGGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CAA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAACTCCCCATTTCCCATaGCTCTCAGCTGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPTPHFP*LSAGCR
Trigger: CCGGCAGCCAGCTGAGAGCAATGGGAAATGGGGAGT...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGCTGGGAGCCTTCCACTaGGGAGGCTCAAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGLGAFH*GGSKLT
Trigger: AGTCAGCTTTGAGCCTCCCAAGTGGAAGGCTCCCAG...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTTTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 5 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGTCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: QDCPETFCSVKIRHSTPLSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...CAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TCCAGAATTTCCTTAACCGAGGAGTCCCGTGCCCCCGTGGGCTGGCACCAGTTGTTTCCTTCTTCCTGCTaGGATTGCAAACCTGCCATC +
Preference number: 5 (lower is better)
Translates to: SRISLTEESRAPVGWHQLFPSSC*DCKPAI
Trigger: GATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAA...CAACTGGTGCCAGCCCACGGGGGCACGGGACTCCTCGGTTAAGGAAATTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS-3UTR CAA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCA +
Preference number: 5 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRAVWQTS*GGQCNP
Trigger: TGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCTGCGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCA +
Preference number: 5 (lower is better)
Translates to: RKLSSREVRGFIQINEPCVWQTS*GGQCNP
Trigger: TGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC...GCAGGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS GCA 90 bp GTATGCAGATCCTCAATTCATCCCTGTTCCAGCCCCCTTCATTCATaGAGGCCACCTTTGTCTTTAAGAGGTGGGCTTCGGCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VCRSSIHPCSSPLHS*RPPLSLRGGLRRLL
Trigger: GAGGAGCCGCCGAAGCCCACCTCTTAAAGACAAAGGTGGCCTGCATGAATGAAGGGGGCTGGAACAGGGATGAATTGAGGATCTGCATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS-3UTR CAA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCTTTAAGCTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRAFKLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAAA...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCAGCTTCTCCTGGCATTaGATCAGCTCCAGTACGGTT +
Preference number: 5 (lower is better)
Translates to: GRHPWVASATHVHSHLCSSFSWH*ISSSTV
Trigger: AACCGTACTGGAGCTGATCAAATGCCAGGAGAAGCT...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGACTAGGGATGCTGCGCAGCACCCTACAGTGCATGAATCTGGGGTTACCTGCCAGCTTCTCCTGGCATTaGATCAGCTCCAGTACGGTT +
Preference number: 5 (lower is better)
Translates to: RLGMLRSTLQCMNLGLPASFSWH*ISSSTV
Trigger: AACCGTACTGGAGCTGATCAAATGCCAGGAGAAGCT...GGCAGGTAACCCCAGATTCATGCACTGTAGGGTGCTGCGCAGCATCCCTAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGCTCTAGGAAGCATTaGTTGGGCTGGAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLCSRKH*LGWRNS
Trigger: GGAGTTTCTCCAGCCCAACAAATGCTTCCTAGAGCA...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCTTCAGAGCTGTGCCTTaGGCGGTTGATCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPFRAVP*AVDPPR
Trigger: CCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAA...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCTGGGAGCCTTCCACTaGGGAGGCTCAAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHLGAFH*GGSKLT
Trigger: AGTCAGCTTTGAGCCTCCCAAGTGGAAGGCTCCCAG...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGCTCCCATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 5 (lower is better)
Translates to: LSGNLLQCQNPALHSPAPIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...GGGAGCAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 5 (lower is better)
Translates to: YRHFPRWYWVSSPILEAGAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 5 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGGTCAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: MPTPTVPSTHVTCGFGWVKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...GACCCAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCGTTCTAATGAAAGGGTaGGCTGGCTGCTGGCATAGA +
Preference number: 5 (lower is better)
Translates to: GRHPWVASATHVHSHLCSVLMKG*AGCWHR
Trigger: TCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAAC...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGATCAATGAGCCCTGCAACCCCACGGTTGGCTaGGCCACCTCTTCCCTACAT +
Preference number: 5 (lower is better)
Translates to: RKLSSREVRGFIQINEPCNPTVG*ATSSLH
Trigger: ATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGTT...GCAGGGCTCATTGATCTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACAACCCCACGGTTGGCTaGGCCACCTCTTCCCTACAT +
Preference number: 5 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHNPTVG*ATSSLH
Trigger: ATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGTT...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGGGCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAGAGCTAACCCCACGGTaGGCTTGGCCACCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GAENSNALTTCLVFLAWPELTPR*AWPPLP
Trigger: GGGAAGAGGTGGCCAAGCCAACCGTGGGGTTAGCTC...TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp CCCACTCATGGCCTAGAGGTTGCACAGAGCTGTCTGGCACCCGCTTCTTTGGCTAGAGTGTGGGAATGTTaGCTGAGACAGGAGACACAA +
Preference number: 5 (lower is better)
Translates to: PTHGLEVAQSCLAPASLARVWEC*LRQETQ
Trigger: TTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCT...AGCCAAAGAAGCGGGTGCCAGACAGCTCTGTGCAACCTCTAGGCCATGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CAA 90 bp GATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGGCAGGAGAACCAGCTaGAACCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: DDFYRHFPRWYWVSSPILGRRTS*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAGCTGGTTCTCCTGCC...AAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS TCA 90 bp TGGCTGCCATTCTTCTGGTCCAGCACTGGCTTGATAGGGCAAGGCTaGGATCTCATTCCAAAGAGGTATGCCTGGCATGCGGATGATGAG +
Preference number: 5 (lower is better)
Translates to: WLPFFWSSTGLIGQG*DLIPKRYAWHADDE
Trigger: CTCATCATCCGCATGCCAGGCATACCTCTTTGGAATGAGATCTCAGCCTTGCCCTATCAAGCCAGTGCTGGACCAGAAGAATGGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS-3UTR CAA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATACTCCCCATTTCCCATaGCTCTCAGCTGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: NRQDVDELEAPRARSQSYTPHFP*LSAGCR
Trigger: CCGGCAGCCAGCTGAGAGCAATGGGAAATGGGGAGT...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTAACAAGGTTCCAGGTACTCCCCATTTCCCATaGCTCTCAGCTGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: GSNSDLLSQDLHFNKVPGTPHFP*LSAGCR
Trigger: CCGGCAGCCAGCTGAGAGCAATGGGAAATGGGGAGT...ACCTGGAACCTTGTTAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCTTTAAGCTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVFKLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAAA...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGATGCTCTAGGAAGCATTaGTTGGGCTGGAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: VSLQDCETGRKLSSREVRCSRKH*LGWRNS
Trigger: GGAGTTTCTCCAGCCCAACAAATGCTTCCTAGAGCA...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCATTCAGAGCTGTGCCTTaGGCGGTTGATCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: FYRHFPRWYWVSSPILEAFRAVP*AVDPPR
Trigger: CCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAA...TGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp CTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCTGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: LQDCPETFCSVKIRHSTPCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...GGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACTGGGAGCCTTCCACTaGGGAGGCTCAAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: VQARDAAQHPTMHKRASKLGAFH*GGSKLT
Trigger: AGTCAGCTTTGAGCCTCCCAAGTGGAAGGCTCCCAG...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 5 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCTGGATGAGAACATCTCATaGACAATAGGATGGATCCTA +
Preference number: 5 (lower is better)
Translates to: EDANTNGPLHPRHLWVRLDENIS*TIGWIL
Trigger: TAGGATCCATCCTATTGTCAATGAGATGTTCTCATC...CAGCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCCTTGAAACTAAGGGCCCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 5 (lower is better)
Translates to: TTCLVFLAWPTPSLKLRAQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...GGCCCTTAGTTTCAAGGAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGTTCTAATGAAAGGGTaGGCTGGCTGCTGGCATAGA +
Preference number: 5 (lower is better)
Translates to: VSLQDCETGRKLSSREVRVLMKG*AGCWHR
Trigger: TCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAAC...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680138.1
CDS-3UTR CAA 90 bp CAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTCGGCAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 5 (lower is better)
Translates to: QKMPTPTVPSTHVTCGFGKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...GCCGAACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCAGAGCTCAGGAGCCTTaGTCCCTGTGGAATCAAGAT +
Preference number: 5 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSRAQEP*SLWNQD
Trigger: ATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCT...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACGTGTGGCAGACATCCTaGGGTGGCCAGTGCAACCCA +
Preference number: 5 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHVWQTS*GGQCNP
Trigger: TGGGTTGCACTGGCCACCCAAGGATGTCTGCCACAC...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAGAGCTAACCCCACGGTaGGCTTGGCCACCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVELTPR*AWPPLP
Trigger: GGGAAGAGGTGGCCAAGCCAACCGTGGGGTTAGCTC...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGCTCTAACTCAGACCTCCTGAGTCAGGATCTGCATTTTAACAAGGTTCCAGGTTGCTTACTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: GSNSDLLSQDLHFNKVPGCLLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGCA...ACCTGGAACCTTGTTAAAATGCAGATCCTGACTCAGGAGGTCTGAGTTAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp TTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTTTCCTCTGGTTTCCATaGTTTTTGTCCCTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LPEDANTNGPLHPRHLWVFLWFP*FLSLAG
Trigger: ACCAGCAAGGGACAAAAACAATGGAAACCAGAGGAA...AACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTTTCAGAGCTGTGCCTTaGGCGGTTGATCCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASFRAVP*AVDPPC
Trigger: GCAGGGAGGATCAACCGCCAAAGGCACAGCTCTGAA...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680138.1
CDS GCA 90 bp TATGGAACACGACGAGATCGGCATCAGAGCCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTCCCTGCTTCTCAGGTCAATTTCCTA +
Preference number: 5 (lower is better)
Translates to: YGTRRDRHQSQSSEL*LWRLILPASQVNFL
Trigger: TAGGAAATTGACCTGAGAAGCAGGGAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTGGCTCTGATGCCGATCTCGTCGTGTTCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680138.1
CDS-3UTR CAA 90 bp GTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCAGGGTACCATCGGAGTaGCCTCTTAAGACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: VTTGWHLLGTGQRCCSTSRVPSE*PLKTVF
Trigger: GAAAACAGTCTTAAGAGGCAACTCCGATGGTACCCT...GGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: LQDCETGRKLSSREVRGFIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...AAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTCAGCAATGTCAAAGTaGTCTTTTCTGCACCCCTGT +
Preference number: 5 (lower is better)
Translates to: LLLPEDANTNGPLHPRHLSAMSK*SFLHPC
Trigger: ACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGA...CAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GGTGGGCCGGGAGCGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAAAGCTTCTCCTGGCATTaGATCAGCTCCAGTACGGTT +
Preference number: 5 (lower is better)
Translates to: GGPGANEVSLQDCETGRKSFSWH*ISSSTV
Trigger: AACCGTACTGGAGCTGATCAAATGCCAGGAGAAGCT...TTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCAGCTTCTCCTGGCATTaGATCAGCTCCAGTACGGTT +
Preference number: 5 (lower is better)
Translates to: PFLCFFCQKMPTPTVPSTSFSWH*ISSSTV
Trigger: AACCGTACTGGAGCTGATCAAATGCCAGGAGAAGCT...GGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAGCCACTCACATTATTGGTaGGGTCAACTGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: GRHPWVASATHVHSHLCSHSHYW*GQLDPR
Trigger: TCTTGGATCCAGTTGACCCAACCAATAATGTGAGTG...GCTACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGCTGGAGAAACTCCTaGATGAACTTATCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VSLQDCETGRKLSSREVRGWRNS*MNLSRR
Trigger: CCTTCTGGATAAGTTCATCAAGGAGTTTCTCCAGCC...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGATGCTCTAGGAAGCATTaGTTGGGCTGGAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: TGTFQGGIGFPVPSLKQGCSRKH*LGWRNS
Trigger: GGAGTTTCTCCAGCCCAACAAATGCTTCCTAGAGCA...TCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATCAATGAGCCCTGCATAAACCTCGGGGCTGGGTGTGGAGCCAGAACTCAGCTGTCTGGATCTTGGCTGTaGATTGTCGGAAGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: INEPCINLGAGCGARTQLSGSWL*IVGSSF
Trigger: AAAACTGCTTCCGACAATCAACAGCCAAGATCCAGA...CAGCTGAGTTCTGGCTCCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGCTGTGCCTTTGGCGGTaGATCCTCCCCGGACAATCT +
Preference number: 5 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLLCLWR*ILPGQS
Trigger: AGATTGTCCGGGGAGGATCAACCGCCAAAGGCACAG...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTTCAGAGCTGTGCCTTaGGCGGTTGATCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: RRSSLIQACYRAISRQRLFRAVP*AVDPPR
Trigger: CCGGGGAGGATCAACCGCCAAAGGCACAGCTCTGAA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTATGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: VADILGWPVQPTSTVIFVCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAACTGGGAGCCTTCCACTaGGGAGGCTCAAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: RPEMLLNILQCTREPPNKLGAFH*GGSKLT
Trigger: AGTCAGCTTTGAGCCTCCCAAGTGGAAGGCTCCCAG...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGACTGGGAGCCTTCCACTaGGGAGGCTCAAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGLGAFH*GGSKLT
Trigger: AGTCAGCTTTGAGCCTCCCAAGTGGAAGGCTCCCAG...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTAATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 5 (lower is better)
Translates to: VADILGWPVQPTSTVIFVIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 5 (lower is better)
Translates to: QDVDELEAPRARSQSYENAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 5 (lower is better)
Translates to: VDELEAPRARSQSYENQGQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGACTAGGGATGCTGCGCAGCACCCTACAGTGCATGAATCTGGGGTTACCTGCCCTGGCCATGTTAAAATaGAACTCAATTTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: RLGMLRSTLQCMNLGLPALAMLK*NSISSP
Trigger: GGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAG...GGCAGGTAACCCCAGATTCATGCACTGTAGGGTGCTGCGCAGCATCCCTAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGCTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCTTTCCTTCTTCCTGCTaGGATTGCAAACCTGCCATC +
Preference number: 5 (lower is better)
Translates to: SSRTVRKPSAVSKSGTPLFPSSC*DCKPAI
Trigger: GATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAA...GAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTGGGTTATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: FARRCQHQRSPPPTSPVGYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...ACCCACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TCTGCGGACCAGCAGCTCATCATGGAGCTGGCTAGAAATATGAAATCCTGGGCTGCAGACTTCAAATGCTaGCCCCAGCTGGACTTTTCC +
Preference number: 5 (lower is better)
Translates to: SADQQLIMELARNMKSWAADFKC*PQLDFS
Trigger: GGAAAAGTCCAGCTGGGGCAAGCATTTGAAGTCTGC...AGCCCAGGATTTCATATTTCTAGCCAGCTCCATGATGAGCTGCTGGTCCGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS GCA 90 bp GCCCTGGGGCTATTGGTGCCATTTCCCAGGCCCCTCTTCTCTAGTTaGACAGATTTGTTCTGGCATCAACGCAGAAATTTACGCGTACAT +
Preference number: 5 (lower is better)
Translates to: ALGLLVPFPRPLFSS*TDLFWHQRRNLRVH
Trigger: ATGTACGCGTAAATTTCTGCGTTGATGCCAGAACAAATCTGTGCAACTAGAGAAGAGGGGCCTGGGAAATGGCACCAATAGCCCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS GCA 90 bp GAAAGAGGCCTGGAGTGGGAATCCGGCAACTTGAATTTGGATTCCTaGAGCTCCTCCAAGCTGCTGAGGGATTTTGTCTACGACATCAAG +
Preference number: 5 (lower is better)
Translates to: ERGLEWESGNLNLDS*SSSKLLRDFVYDIK
Trigger: CTTGATGTCGTAGACAAAATCCCTCAGCAGCTTGGAGGAGCTGCAGGAATCCAAATTCAAGTTGCCGGATTCCCACTCCAGGCCTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS CCA 90 bp CCAGTGACCTTCAATGAGACAGTTCACTCATTGCCCTGGGGCTATTaGTGCCATTTCCCAGGCCCCTCTTCTCTAGTTGCACAGATTTGT +
Preference number: 5 (lower is better)
Translates to: PVTFNETVHSLPWGY*CHFPGPSSLVAQIC
Trigger: ACAAATCTGTGCAACTAGAGAAGAGGGGCCTGGGAAATGGCACCAATAGCCCCAGGGCAATGAGTGAACTGTCTCATTGAAGGTCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CCA 90 bp GTTTTCACTCCAGTGACCTTCAATGAGACAGTTCACTCATTGCCCTaGGGCTATTGGTGCCATTTCCCAGGCCCCTCTTCTCTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: VFTPVTFNETVHSLP*GYWCHFPGPSSLVA
Trigger: TGCAACTAGAGAAGAGGGGCCTGGGAAATGGCACCAATAGCCCCAGGGCAATGAGTGAACTGTCTCATTGAAGGTCACTGGAGTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS-3UTR CAA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCGAGCTTACCAACTCTaGTATCCGGGACAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: QDVDELEAPRARSQSYENRAYQL*YPGQGN
Trigger: GTTTCCCTGTCCCGGATACAAGAGTTGGTAAGCTCG...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342315.8
CDS-3UTR CAA 90 bp CTCTGGTCAAAACCTGCAAGCATGATCTGCGGACCAGCAGCTCATCATGGAGCTAGGGTACCATCGGAGTaGCCTCTTAAGACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LWSKPASMICGPAAHHGARVPSE*PLKTVF
Trigger: GAAAACAGTCTTAAGAGGCAACTCCGATGGTACCCT...AGCTCCATGATGAGCTGCTGGTCCGCAGATCATGCTTGCAGGTTTTGACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp CAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTGGCTTCAGTTTCCTTTCATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: QLQGILWGQRPLWLQFPFIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...GAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGTTTAAGCTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: GGENQVYLEGGYPGGIYQFKLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAAA...CTGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTGGCAGACATCCTTGGGTGGCCAGTGCAACCCACGTCCACAGTCATCTTTGTACACTCACATTATTGGTaGGGTCAACTGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: VADILGWPVQPTSTVIFVHSHYW*GQLDPR
Trigger: TCTTGGATCCAGTTGACCCAACCAATAATGTGAGTG...TACAAAGATGACTGTGGACGTGGGTTGCACTGGCCACCCAAGGATGTCTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGCTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCTCTGGATCTTGGCTGTaGATTGTCGGAAGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: SSRTVRKPSAVSKSGTPLSGSWL*IVGSSF
Trigger: AAAACTGCTTCCGACAATCAACAGCCAAGATCCAGA...GAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTTCTGGATCTTGGCTGTaGATTGTCGGAAGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCSGSWL*IVGSSF
Trigger: AAAACTGCTTCCGACAATCAACAGCCAAGATCCAGA...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCGGACAATCTGGATCTaGGCTGTTGATTGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHRTIWI*AVDCRK
Trigger: CTTCCGACAATCAACAGCCAAGATCCAGATTGTCCG...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GGTGGGCCGGGAGCGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAAATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 5 (lower is better)
Translates to: GGPGANEVSLQDCETGRKIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...TTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GGTGGGCCGGGAGCGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAATTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: GGPGANEVSLQDCETGRKFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...TTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 5 (lower is better)
Translates to: IVTTGWHLLGTGQRCCSTFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...TGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAAGGGCCCAGAGCTCAGGAGCCTTTGTCCCTGTGGAATCAAGATGCGCTACCTGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 5 (lower is better)
Translates to: EGPRAQEPLSLWNQDALPVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...AGGTAGCGCATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCTGGGCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342315.8
ENST00000392583.7
CDS-3UTR CAA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 5 (lower is better)
Translates to: NRQDVDELEAPRARSQSYQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCATCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: NHSFASFARRCQHQRSPPSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...TGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCATTTCCTTCTTCCTGCTaGGATTGCAAACCTGCCATC +
Preference number: 5 (lower is better)
Translates to: GWHLLGTGQRCCSTSYNAFPSSC*DCKPAI
Trigger: GATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAA...TGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCCCCTGTATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: QDCPETFCSVKIRHSTPLYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...CAGGGGAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAAACCCCACGGTTGGCTaGGCCACCTCTTCCCTACAT +
Preference number: 5 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPNPTVG*ATSSLH
Trigger: ATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGTT...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCGAGCTAACCCCACGGTaGGCTTGGCCACCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SWCLHCLKRKTYVGEQCLELTPR*AWPPLP
Trigger: GGGAAGAGGTGGCCAAGCCAACCGTGGGGTTAGCTC...GAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: VDELEAPRARSQSYENQGIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGTGGGCCGGGAGCGAATGAAGTTTCGCTGCAGGACTGTGAAACAGGTAGAAAATCAGCAATGTCAAAGTaGTCTTTTCTGCACCCCTGT +
Preference number: 5 (lower is better)
Translates to: GGPGANEVSLQDCETGRKSAMSK*SFLHPC
Trigger: ACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGA...TTTTCTACCTGTTTCACAGTCCTGCAGCGAAACTTCATTCGCTCCCGGCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACAGCTTCTCCTGGCATTaGATCAGCTCCAGTACGGTT +
Preference number: 5 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDSFSWH*ISSSTV
Trigger: AACCGTACTGGAGCTGATCAAATGCCAGGAGAAGCT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACTCTGGATCTTGGCTGTaGATTGTCGGAAGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TTGWHLLGTGQRCCSTSYSGSWL*IVGSSF
Trigger: AAAACTGCTTCCGACAATCAACAGCCAAGATCCAGA...GTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGCGGACAATCTGGATCTaGGCTGTTGATTGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: VDELEAPRARSQSYENQGRTIWI*AVDCRK
Trigger: CTTCCGACAATCAACAGCCAAGATCCAGATTGTCCG...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAACTGGGAGCCTTCCACTaGGGAGGCTCAAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: LEAPRARSQSYENQGESKLGAFH*GGSKLT
Trigger: AGTCAGCTTTGAGCCTCCCAAGTGGAAGGCTCCCAG...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCATTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCATTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp AGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAACAAAGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: RPEMLLNILQCTREPPNKGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...TTTGTTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 5 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGTTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 5 (lower is better)
Translates to: VDELEAPRARSQSYENQGFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTGCTTTAACCACATGCTaGGTCTTTCTGGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFALTTC*VFLAWP
Trigger: TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGC...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp AGCTCCAGGACTGTCCGGAAACCTTCTGCAGTGTCAAAATCCGGCACTCCACTCAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 5 (lower is better)
Translates to: SSRTVRKPSAVSKSGTPLSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...GAGTGGAGTGCCGGATTTTGACACTGCAGAAGGTTTCCGGACAGTCCTGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCGGCAGGAGAACCAGCTaGAACCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: VSELISGCYSRRSSLIQAGRRTS*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAGCTGGTTCTCCTGCC...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGAGGGTACCATCGGAGTaGCCTCTTAAGACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: VDELEAPRARSQSYENQGRVPSE*PLKTVF
Trigger: GAAAACAGTCTTAAGAGGCAACTCCGATGGTACCCT...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCTTTGCTTCTAGGGTACCATCGGAGTaGCCTCTTAAGACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: GFPVPSLKQGEDNHSFASRVPSE*PLKTVF
Trigger: GAAAACAGTCTTAAGAGGCAACTCCGATGGTACCCT...AGAAGCAAAGGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCACGTCACCTGTTTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: FFCQKMPTPTVPSTHVTCFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...ACAGGTGACGTGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTTTCGCTGCAGGACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGATTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: VSLQDCETGRKLSSREVRFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...TCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTCCTGCAGCGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000551603.2
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTTTAAGCTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRFKLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGCTTAAA...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCCTACAATTCAGCAATGTCAAAGTaGTCTTTTCTGCACCCCTGT +
Preference number: 5 (lower is better)
Translates to: TGWHLLGTGQRCCSTSYNSAMSK*SFLHPC
Trigger: ACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGA...ATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAAGCTTCTCCTGGCATTaGATCAGCTCCAGTACGGTT +
Preference number: 5 (lower is better)
Translates to: DFYRHFPRWYWVSSPILESFSWH*ISSSTV
Trigger: AACCGTACTGGAGCTGATCAAATGCCAGGAGAAGCT...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCACACTCACATTATTGGTaGGGTCAACTGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: PSTLECLPIRKLPKPHCPHSHYW*GQLDPR
Trigger: TCTTGGATCCAGTTGACCCAACCAATAATGTGAGTG...TGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAAGGCTGGAGAAACTCCTaGATGAACTTATCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VQARDAAQHPTMHKRASKGWRNS*MNLSRR
Trigger: CCTTCTGGATAAGTTCATCAAGGAGTTTCTCCAGCC...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCTCTAGGAAGCATTTGTaGGGCTGGAGAAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPSRKHL*GWRNSL
Trigger: CAAGGAGTTTCTCCAGCCCAACAAATGCTTCCTAGA...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATTGCTCTAGGAAGCATTaGTTGGGCTGGAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: NRQDVDELEAPRARSQSYCSRKH*LGWRNS
Trigger: GGAGTTTCTCCAGCCCAACAAATGCTTCCTAGAGCA...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACATCTGGATCTTGGCTGTaGATTGTCGGAAGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: IVTTGWHLLGTGQRCCSTSGSWL*IVGSSF
Trigger: AAAACTGCTTCCGACAATCAACAGCCAAGATCCAGA...TGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTACAGGCCAGAGATGCTGCTCAACATCCTACAATGCACAAGAGAGCCTCCAAATGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: VQARDAAQHPTMHKRASKCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...TTTGGAGGCTCTCTTGTGCATTGTAGGATGTTGAGCAGCATCTCTGGCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 5 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTTTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 5 (lower is better)
Translates to: LEAPRARSQSYENQGESKAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCACAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 5 (lower is better)
Translates to: WWREPSISGGRISWWNISQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: RRSSLIQACYRAISRQRLSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTTTTCCTTCTTCCTGCTaGGATTGCAAACCTGCCATC +
Preference number: 5 (lower is better)
Translates to: LPSTLECLPIRKLPKPHCFPSSC*DCKPAI
Trigger: GATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAA...ACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTAACCCCACGGTTGGCTaGGCCACCTCTTCCCTACAT +
Preference number: 5 (lower is better)
Translates to: ISGCYSRRSSLIQACYRANPTVG*ATSSLH
Trigger: ATGTAGGGAAGAGGTGGCCAAGCCAACCGTGGGGTT...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp CTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCAAATCTGCAGACTTCAAATGCTaGCCCCAGCTGGACTTTTCC +
Preference number: 5 (lower is better)
Translates to: LVPITEFRPIKGGQLFKSADFKC*PQLDFS
Trigger: GGAAAAGTCCAGCTGGGGCAAGCATTTGAAGTCTGC...AGATTTGAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp AAGAGTGTGGGAATGTTTGCTGAGACAGGAGACACAAGAGGTGGGCAGGTCTTAGCACCCCCTCAAGCTTaGATAGTTATCTATGGAAGG +
Preference number: 5 (lower is better)
Translates to: KSVGMFAETGDTRGGQVLAPPQA*IVIYGR
Trigger: CCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGC...TAAGACCTGCCCACCTCTTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAACATTGTTTTTGTCCCTaGCTGGTGGCCCTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: DFYRHFPRWYWVSSPILEHCFCP*LVALSR
Trigger: TCTGCTTAGGGCCACCAGCAAGGGACAAAAACAATG...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp TTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCATGGTTTCCATTGTTTTaGTCCCTTGCTGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: FYRHFPRWYWVSSPILEAWFPLF*SLAGGP
Trigger: AGGGCCACCAGCAAGGGACAAAAACAATGGAAACCA...TGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTCTGTGCCTTTGGCGGTaGATCCTCCCTGCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: ISGCYSRRSSLIQACYRALCLWR*ILPASQ
Trigger: CTGAGAAGCAGGGAGGATCAACCGCCAAAGGCACAG...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680138.1
CDS TCA 90 bp CACTCCTTCTTGCTGCGGAGAAACCACAAGGCAACCTGGGTAGTTTaGACAAAGTTCTCTAGCCTCCCTAAGTTTACTCCTCTGTACTGT +
Preference number: 5 (lower is better)
Translates to: HSFLLRRNHKATWVV*TKFSSLPKFTPLYC
Trigger: ACAGTACAGAGGAGTAAACTTAGGGAGGCTAGAGAACTTTGTTCAAACTACCCAGGTTGCCTTGTGGTTTCTCCGCAGCAAGAAGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 90 bp CTCCAGTCACTCAAAGGAGAAGGAGATTCTAAGCTCCTTAGAATCTaGAGTGGGTTCAATGGTGGACCCCTAAAAATACATGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LQSLKGEGDSKLLRI*SGFNGGPLKIHALG
Trigger: CCCCAGAGCATGTATTTTTAGGGGTCCACCATTGAACCCACTGCAGATTCTAAGGAGCTTAGAATCTCCTTCTCCTTTGAGTGACTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CCA 90 bp CAGACTGTAGCCCCTTCCTTACAATCTCTAGGTGTCACCTTCCTCTaGCCTAAGCAGAGAAACCTTCAACCAACTTCAGGAAGATGGAAA +
Preference number: 5 (lower is better)
Translates to: QTVAPSLQSLGVTFL*PKQRNLQPTSGRWK
Trigger: TTTCCATCTTCCTGAAGTTGGTTGAAGGTTTCTCTGCTTAGGCCAGAGGAAGGTGACACCTAGAGATTGTAAGGAAGGGGCTACAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS-3UTR CAA 90 bp AAGATGCGCTACCTTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCCACTCACATTATTGGTaGGGTCAACTGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: KMRYLPSTLECLPIRKLPHSHYW*GQLDPR
Trigger: TCTTGGATCCAGTTGACCCAACCAATAATGTGAGTG...GGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAAGGTAGCGCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACGGCTGGAGAAACTCCTaGATGAACTTATCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHGWRNS*MNLSRR
Trigger: CCTTCTGGATAAGTTCATCAAGGAGTTTCTCCAGCC...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTTCTAGGAAGCATTTGTaGGGCTGGAGAAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: DDFYRHFPRWYWVSSPILSRKHL*GWRNSL
Trigger: CAAGGAGTTTCTCCAGCCCAACAAATGCTTCCTAGA...AAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTATGCTCTAGGAAGCATTaGTTGGGCTGGAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVCSRKH*LGWRNS
Trigger: GGAGTTTCTCCAGCCCAACAAATGCTTCCTAGAGCA...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTTGCTCTAGGAAGCATTaGTTGGGCTGGAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSCSRKH*LGWRNS
Trigger: GGAGTTTCTCCAGCCCAACAAATGCTTCCTAGAGCA...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGCGGACAATCTGGATCTaGGCTGTTGATTGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: YFQTTPPLDDFYRHFPRWRTIWI*AVDCRK
Trigger: CTTCCGACAATCAACAGCCAAGATCCAGATTGTCCG...CCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 5 (lower is better)
Translates to: MTFTGTFQGGIGFPVPSLIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...CAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACTTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: WWREPSISGGRISWWNISGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTGCTCCAAGGCATACTTaGGGGGCAAAGACCCCTTTG +
Preference number: 5 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSAPRHT*GAKTPL
Trigger: CAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGC...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAGAGCTCAGGAGCCTTaGTCCCTGTGGAATCAAGAT +
Preference number: 5 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVRAQEP*SLWNQD
Trigger: ATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCT...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp AGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCAGAGCTCAGGAGCCTTaGTCCCTGTGGAATCAAGAT +
Preference number: 5 (lower is better)
Translates to: SLKTLLIVTTGWHLLGTGRAQEP*SLWNQD
Trigger: ATCTTGATTCCACAGGGACAAAGGCTCCTGAGCTCT...GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp CAGCTCCAAGGCATACTTTGGGGGCAAAGACCCCTTTGGCTTCAGTTTCCTTTCAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 5 (lower is better)
Translates to: QLQGILWGQRPLWLQFPFSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...GAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCCCAAAGTATGCCTTGGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AAATTGTTTTTCAACCACTTCGTGAACAGACAGAACTTCAGCTTATCCCCAGTTTGCTTACTCAGAGCGTaGAAGGCGGCCAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: KLFFNHFVNRQNFSLSPVCLLRA*KAASTS
Trigger: CGAGGTGCTGGCCGCCTTCAACGCTCTGAGTAAGCA...AACTGGGGATAAGCTGAAGTTCTGTCTGTTCACGAAGTGGTTGAAAAACAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CAA 90 bp TTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGCGGCACCCCCTCAAGCTTaGATAGTTATCTATGGAAGG +
Preference number: 5 (lower is better)
Translates to: FSKDNQGMGEKLVPEKRAAPPQA*IVIYGR
Trigger: CCTTCCATAGATAACTATCAAAGCTTGAGGGGGTGC...CGCTCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTCTGTGCCTTTGGCGGTaGATCCTCCCTAAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFLCLWR*ILPKEE
Trigger: TTCTTCCTTAGGGAGGATCAACCGCCAAAGGCACAG...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680514.1
CDS GCA 90 bp ACATGGGTTAAGGAGGTGAGGAAAGGGTATGTTCTATTTCCTGTATaGAGATCCTCAATTCATCCCTGTTCCAGCCCCCTTCATTCATGC +
Preference number: 5 (lower is better)
Translates to: TWVKEVRKGYVLFPV*RSSIHPCSSPLHSC
Trigger: GCATGAATGAAGGGGGCTGGAACAGGGATGAATTGAGGATCTGCATACAGGAAATAGAACATACCCTTTCCTCACCTCCTTAACCCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CCA 90 bp AGGATTCTATGGCTTCTGGATGAGAACATCTCATTGACAATAGGATaGATCCTAGCTCCACAACTTCCTGGTGTCTGCATTGTCGGCACT +
Preference number: 5 (lower is better)
Translates to: RILWLLDENISLTIG*ILAPQLPGVCIVGT
Trigger: AGTGCCGACAATGCAGACACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATCCAGAAGCCATAGAATCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342315.8
CDS-3UTR CAA 90 bp TTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTAAAATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: LEAPRARSQSYENQGESKIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...TTTACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp ACCTGGATGGTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: TWMVNPSRDFWISKLFFNIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...GTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCACCATCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS-3UTR CAA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCATTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTTGAAGTTCTAATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTTCAGCAATGTCAAAGTaGTCTTTTCTGCACCCCTGT +
Preference number: 5 (lower is better)
Translates to: LEVLMKGLAGCWHRGCLCSAMSK*SFLHPC
Trigger: ACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGA...ACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAACTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAATCAGCAATGTCAAAGTaGTCTTTTCTGCACCCCTGT +
Preference number: 5 (lower is better)
Translates to: DFYRHFPRWYWVSSPILESAMSK*SFLHPC
Trigger: ACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGA...TTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTAGCTTCTCCTGGCATTaGATCAGCTCCAGTACGGTT +
Preference number: 5 (lower is better)
Translates to: ENSNALTTCLVFLAWPTPSFSWH*ISSSTV
Trigger: AACCGTACTGGAGCTGATCAAATGCCAGGAGAAGCT...AGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTATCTAGGAAGCATTTGTaGGGCTGGAGAAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVSRKHL*GWRNSL
Trigger: CAAGGAGTTTCTCCAGCCCAACAAATGCTTCCTAGA...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCTGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: RRSSLIQACYRAISRQRLCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTCCTAGTACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: FLVHWNVCQSGSSPSLTVKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...GACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGTACTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp GACTGTGAAACAGGTAGAAAACTCTCCTCCCGGGAGGTCCGAGGATTTATACAGAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: DCETGRKLSSREVRGFIQKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...CTGTATAAATCCTCGGACCTCCCGGGAGGAGAGTTTTCTACCTGTTTCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp AGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCTTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: SLKTLLIVTTGWHLLGTGFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTTTCCTTTCACACTCTTaGTACCAGTGCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSFLSHS*YQCFTR
Trigger: CCTGGTGAAGCACTGGTACAAAGAGTGTGAAAGGAA...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACCCAAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: IPLLLLPEDANTNGPLHPKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...TGGGTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 5 (lower is better)
Translates to: VDELEAPRARSQSYENQGVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...CCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGCAGGACGTGGATGAGTaGGAAGCACCGAGAGCAAGA +
Preference number: 5 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLQDVDE*EAPRAR
Trigger: TCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGTTCTAATGAAAGGGTaGGCTGGCTGCTGGCATAGA +
Preference number: 5 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGVLMKG*AGCWHR
Trigger: TCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAAC...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAGAGATGCTGCTCAACAAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 5 (lower is better)
Translates to: IVTTGWHLLGTGQRCCSTKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...TGTTGAGCAGCATCTCTGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGGAGAGGATAACCATTCCAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 5 (lower is better)
Translates to: GGIGFPVPSLKQGEDNHSKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...GGAATGGTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GATGAGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTGCTTTAACCACATGCTaGGTCTTTCTGGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: DENISLTIGWILAPQLPGALTTC*VFLAWP
Trigger: TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGC...ACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTTCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCATGGTTTCCATTGTTTTaGTCCCTTGCTGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: WWREPSISGGRISWWNISWFPLF*SLAGGP
Trigger: AGGGCCACCAGCAAGGGACAAAAACAATGGAAACCA...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS TCA 90 bp CTGCAAACTCACCAGGACTGGCATTTGTCTTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGGGGCTGGGATTATCATTTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: LQTHQDWHLSYPRIF*ALDRSRGWDYHLSS
Trigger: TGAGCTTAAATGATAATCCCAGCCCCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000551603.2
ENST00000620097.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
ENST00000680898.1
ENST00000681673.1
CDS TCA 90 bp CTGCAAACTCACCAGGACTGGCATTTGTCTTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGGGGCTGGGATTATCATTTAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LQTHQDWHLSYPRIF*ALDRSRGWDYHLSH
Trigger: ATGGCTTAAATGATAATCCCAGCCCCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552756.6
CDS-3UTR CAA 90 bp CAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACTTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: QDVDELEAPRARSQSYENFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...GTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp CCTACTCTTGTGCCAATCACTGAGTTTCGGCCAATCAAAGGTGGCCAACTGTTCTTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: PTLVPITEFRPIKGGQLFFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...GAACAGTTGGCCACCTTTGATTGGCCGAAACTCAGTGATTGGCACAAGAGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCACTCACATTATTGGTaGGGTCAACTGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSHSHYW*GQLDPR
Trigger: TCTTGGATCCAGTTGACCCAACCAATAATGTGAGTG...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGGCTGGAGAAACTCCTaGATGAACTTATCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGGWRNS*MNLSRR
Trigger: CCTTCTGGATAAGTTCATCAAGGAGTTTCTCCAGCC...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCGGCTGGAGAAACTCCTaGATGAACTTATCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GCYSRRSSLIQACYRAISGWRNS*MNLSRR
Trigger: CCTTCTGGATAAGTTCATCAAGGAGTTTCTCCAGCC...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GATGAGAACATCTCATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTGGTTCTAGGAAGCATTTGTaGGGCTGGAGAAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: DENISLTIGWILAPQLPGSRKHL*GWRNSL
Trigger: CAAGGAGTTTCTCCAGCCCAACAAATGCTTCCTAGA...ACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAATGAGATGTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAAGTATCTGGATCTTGGCTGTaGATTGTCGGAAGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: SWKHREQDHRVMRTKGKVSGSWL*IVGSSF
Trigger: AAAACTGCTTCCGACAATCAACAGCCAAGATCCAGA...TACTTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCATCTGGATCTTGGCTGTaGATTGTCGGAAGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPSGSWL*IVGSSF
Trigger: AAAACTGCTTCCGACAATCAACAGCCAAGATCCAGA...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTCGGACAATCTGGATCTaGGCTGTTGATTGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSRTIWI*AVDCRK
Trigger: CTTCCGACAATCAACAGCCAAGATCCAGATTGTCCG...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATCGGACAATCTGGATCTaGGCTGTTGATTGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDRTIWI*AVDCRK
Trigger: CTTCCGACAATCAACAGCCAAGATCCAGATTGTCCG...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGCTGTGCCTTTGGCGGTaGATCCTCCCCGGACAATCT +
Preference number: 5 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQELCLWR*ILPGQS
Trigger: AGATTGTCCGGGGAGGATCAACCGCCAAAGGCACAG...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCTGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCCCATCCTTGAAGCAAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: FYRHFPRWYWVSSPILEAKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...TGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAATTAAATCCTTTAGTTaGGTGGGCCGGGAGCGAATG +
Preference number: 5 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGIKSFS*VGRERM
Trigger: CATTCGCTCCCGGCCCACCAAACTAAAGGATTTAAT...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTTTTCCAGTCCCATCCTaGAAGCAGGGAGAGGATAAC +
Preference number: 5 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSFPVPS*KQGEDN
Trigger: GTTATCCTCTCCCTGCTTCAAGGATGGGACTGGAAA...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGTTCCTGGTGTCTGCATaGTCGGCACTTTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLFLVSA*SALSKV
Trigger: CACCTTGGAAAGTGCCGACAATGCAGACACCAGGAA...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342315.8
CDS-3UTR CAA 90 bp GAAGCAAGGGAAGGAGGAATAGGGACCATCAAGGGAAGAATGGATGTGAGTGACAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: EAREGGIGTIKGRMDVSDKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...GTCACTCACATCCATTCTTCCCTTGATGGTCCCTATTCCTCCTTCCCTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ACATTGGAATGTCTGCCAATCAGGAAGCTCCCCAAGCCTCACTGTCCAGAGTTTGAAACTCTAGAATTTTaGAAGCTGTGTGCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: TLECLPIRKLPKPHCPEFETLEF*KLCARN
Trigger: GTTCCTAGCACACAGCTTCAAAAATTCTAGAGTTTC...AAACTCTGGACAGTGAGGCTTGGGGAGCTTCCTGATTGGCAGACATTCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
CDS-3UTR CAA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGGCTTTAACCACATGCTaGGTCTTTCTGGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRALTTC*VFLAWP
Trigger: TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGC...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp CCTCCTTTAGATGACTTTTACCGGCACTTTCCAAGGTGGTATTGGGTTTCCAGTCTGGCCATGTTAAAATaGAACTCAATTTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PPLDDFYRHFPRWYWVSSLAMLK*NSISSP
Trigger: GGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAG...ACTGGAAACCCAATACCACCTTGGAAAGTGCCGGTAAAAGTCATCTAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AAAGAACCTGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 5 (lower is better)
Translates to: KEPGGENQVYLEGGYPGGSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...TCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCAGGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ACCATTCCTTTGCTTCTTTTGCCAGAAGATGCCAACACCAACGGTCCCCTCCACAAAATCACTGTGTTCTaGACCTTTGGGTATCTTTTC +
Preference number: 5 (lower is better)
Translates to: TIPLLLLPEDANTNGPLHKITVF*TFGYLF
Trigger: GAAAAGATACCCAAAGGTCAAGAACACAGTGATTTT...GTGGAGGGGACCGTTGGTGTTGGCATCTTCTGGCAAAAGAAGCAAAGGAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGAGTGTGGGAATGTTaGCTGAGACAGGAGACACAA +
Preference number: 5 (lower is better)
Translates to: HFLQRQSGYGGEVSSREERVWEC*LRQETQ
Trigger: TTGTGTCTCCTGTCTCAGCAAACATTCCCACACTCT...CTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp GTGAACCCATCAAGGGACTTCTGGATCTCGAAATTGTTTTTCAACCACTTCGTGGACTGCAACCTACTCTaGTGCCAATCACTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VNPSRDFWISKLFFNHFVDCNLL*CQSLSF
Trigger: GAAACTCAGTGATTGGCACAAGAGTAGGTTGCAGTC...CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAAGTCCCTTGATGGGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680685.1
CDS TCA 90 bp CTGCAAACTCACCAGGACTGGCATTTGTCTTATCCAAGGATCTTTTaGGCTCTCGATAGATCCAGGGGCTGGGATTATCATTTAAGCTAT +
Preference number: 5 (lower is better)
Translates to: LQTHQDWHLSYPRIF*ALDRSRGWDYHLSY
Trigger: ATAGCTTAAATGATAATCCCAGCCCCTGGATCTATCGAGAGCTCAAAAGATCCTTGGATAAGACAAATGCCAGTCCTGGTGAGTTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679877.1
CDS TCA 90 bp ACAATTCTAACACTGATCAGAAACTCAGTCCTGTTTTCACTCCAGTaGCCTTCAATGAGACAGTTCACTCATTGCCCTGGGGCTATTGGT +
Preference number: 5 (lower is better)
Translates to: TILTLIRNSVLFSLQ*PSMRQFTHCPGAIG
Trigger: ACCAATAGCCCCAGGGCAATGAGTGAACTGTCTCATTGAAGGTCACTGGAGTGAAAACAGGACTGAGTTTCTGATCAGTGTTAGAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CCA 90 bp GTGCCATTTCCCAGGCCCCTCTTCTCTAGTTGCACAGATTTGTTCTaGCATCAACGCAGAAATTTACGCGTACATAATAACATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: VPFPRPLFSSCTDLF*HQRRNLRVHNNIFL
Trigger: GAGGAAAATGTTATTATGTACGCGTAAATTTCTGCGTTGATGCCAGAACAAATCTGTGCAACTAGAGAAGAGGGGCCTGGGAAATGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CCA 90 bp TTCCTCTGGCCTAAGCAGAGAAACCTTCAACCAACTTCAGGAAGATaGAAAGCAATGTCTTATCTGCCGATGGCTCTCTTTTCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: FLWPKQRNLQPTSGR*KAMSYLPMALFSSL
Trigger: CAAAGAAGAAAAGAGAGCCATCGGCAGATAAGACATTGCTTTCCATCTTCCTGAAGTTGGTTGAAGGTTTCTCTGCTTAGGCCAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS-3UTR CAA 90 bp ATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAAGGGTACCATCGGAGTaGCCTCTTAAGACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: IFSKDNQGMGEKLVPEKRRVPSE*PLKTVF
Trigger: GAAAACAGTCTTAAGAGGCAACTCCGATGGTACCCT...TCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp AACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATTTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: NRQDVDELEAPRARSQSYFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...ATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GCTGAAAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCACTCACATTATTGGTaGGGTCAACTGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: AENSNALTTCLVFLAWPTHSHYW*GQLDPR
Trigger: TCTTGGATCCAGTTGACCCAACCAATAATGTGAGTG...AGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGTGCTCTAGGAAGCATTaGTTGGGCTGGAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLCSRKH*LGWRNS
Trigger: GGAGTTTCTCCAGCCCAACAAATGCTTCCTAGAGCA...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TTCTTACAGCTTAGATGTCAGCAACTCAAATTTACTAGTAGGGTTCAAAGTAACCTGTGCCTTTGGCGGTaGATCCTCCCCGGACAATCT +
Preference number: 5 (lower is better)
Translates to: FLQLRCQQLKFTSRVQSNLCLWR*ILPGQS
Trigger: AGATTGTCCGGGGAGGATCAACCGCCAAAGGCACAG...GTTACTTTGAACCCTACTAGTAAATTTGAGTTGCTGACATCTAAGCTGTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp TCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCCAAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: SQDTFNCHNWVASTGYRPKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...TGGCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGGGGCAAAGACCCCTTaGGCTTCAGTTTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: LISGCYSRRSSLIQACYRGAKTP*ASVSFH
Trigger: GTGAAAGGAAACTGAAGCCAAAGGGGTCTTTGCCCC...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp CTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATGACTTTTACCGGCACAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LLQGYFQTTPPLDDFYRHKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...GTGCCGGTAAAAGTCATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGGTTCTAATGAAAGGGTaGGCTGGCTGCTGGCATAGA +
Preference number: 5 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLVLMKG*AGCWHR
Trigger: TCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAAC...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGGCTTTAACCACATGCTaGGTCTTTCTGGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLALTTC*VFLAWP
Trigger: TGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGC...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 5 (lower is better)
Translates to: RRSSLIQACYRAISRQRLSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...GAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATTTTCCTTCTTCCTGCTaGGATTGCAAACCTGCCATC +
Preference number: 5 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDFPSSC*DCKPAI
Trigger: GATGGCAGGTTTGCAATCCAAGCAGGAAGAAGGAAA...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATTTTCTCCAAAGACAATCAGGGTATGGGGGAGAAGTTAGTTCCAGAGAAGAGAGACTGCAACCTACTCTaGTGCCAATCACTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: IFSKDNQGMGEKLVPEKRDCNLL*CQSLSF
Trigger: GAAACTCAGTGATTGGCACAAGAGTAGGTTGCAGTC...TCTCTTCTCTGGAACTAACTTCTCCCCCATACCCTGATTGTCTTTGGAGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS TCA 90 bp GGTACAGGGTTGGTAAACTTTCCGGACAATCTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTCTTTAAGGAATGTACGGATGATGTT +
Preference number: 5 (lower is better)
Translates to: GTGLVNFPDNLDLGC*LSEAVFFKECTDDV
Trigger: AACATCATCCGTACATTCCTTAAAGAAAACTGCTTCCGACAATCAACAGCCAAGATCCAGATTGTCCGGAAAGTTTACCAACCCTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS TCA 90 bp ATCACAGTGAATTCACTGAGCACTGCCAGTCTTTTGCTAAGAACATaGTGTGCTCAAGCCTTACGATACTCTGAAGTGGGTATTATGCCT +
Preference number: 5 (lower is better)
Translates to: ITVNSLSTASLLLRT*CAQALRYSEVGIMP
Trigger: AGGCATAATACCCACTTCAGAGTATCGTAAGGCTTGAGCACATCATGTTCTTAGCAAAAGACTGGCAGTGCTCAGTGAATTCACTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS-3UTR CAA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCAGGGTACCATCGGAGTaGCCTCTTAAGACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: VSELISGCYSRRSSLIQARVPSE*PLKTVF
Trigger: GAAAACAGTCTTAAGAGGCAACTCCGATGGTACCCT...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGATCGAGGATGTCACGTaGGCTTCTCTTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: LISGCYSRRSSLIQACYRIEDVT*ASLLIL
Trigger: CAGGATCAGAAGAGAAGCCAACGTGACATCCTCGAT...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AGTCTCAAGACACTTTTAATTGTCACAACTGGGTGGCATCTACTGGGTACAGGCTTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: SLKTLLIVTTGWHLLGTGFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...GCCTGTACCCAGTAGATGCCACCCAGTTGTGACAATTAAAAGTGTCTTGAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCTCAGCAATGTCAAAGTaGTCTTTTCTGCACCCCTGT +
Preference number: 5 (lower is better)
Translates to: SWCLHCLKRKTYVGEQCLSAMSK*SFLHPC
Trigger: ACAGGGGTGCAGAAAAGACAACTTTGACATTGCTGA...GAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCGGCTGGAGAAACTCCTaGATGAACTTATCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VSELISGCYSRRSSLIQAGWRNS*MNLSRR
Trigger: CCTTCTGGATAAGTTCATCAAGGAGTTTCTCCAGCC...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTTCATGGATTTCCTaGACGATTTTGTGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: TTSWCLHCLKRKTYVGEQCSWIS*TILCRS
Trigger: CGAGCGGCACAAAATCGTCAAGGAAATCCATGAACA...TTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: KAERSVNPGERLTMSEDFKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp AAGGCAGAAAGATCTGTGAACCCAGGGGAACGTTTGACAATGTCTGAAGACTTTGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 5 (lower is better)
Translates to: KAERSVNPGERLTMSEDFVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...AAAGTCTTCAGACATTGTCAAACGTTCCCCTGGGTTCACAGATCTTTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGTTCTAATGAAAGGGTaGGCTGGCTGCTGGCATAGA +
Preference number: 5 (lower is better)
Translates to: LISGCYSRRSSLIQACYRVLMKG*AGCWHR
Trigger: TCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAAC...CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SLAMLKLNSISSPITSLEKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...CTCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGGAAACTCTAGAATTTTaGAAGCTGTGTGCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: ILVEYIRYILVGREGFGEETLEF*KLCARN
Trigger: GTTCCTAGCACACAGCTTCAAAAATTCTAGAGTTTC...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGCTGGCCATGTTAAAATaGAACTCAATTTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: KSLAMLKLNSISSPITSLLAMLK*NSISSP
Trigger: GGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAG...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 5 (lower is better)
Translates to: GCYSRRSSLIQACYRAISSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392583.7
ENST00000551603.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS TCA 90 bp AAGTTTACTCCTCTGTACTGTGGAGAGGATAGAAGAAAATCGCAGTaGGTAATCACAGTGAATTCACTGAGCACTGCCAGTCTTTTGCTA +
Preference number: 5 (lower is better)
Translates to: KFTPLYCGEDRRKSQ*VITVNSLSTASLLL
Trigger: TAGCAAAAGACTGGCAGTGCTCAGTGAATTCACTGTGATTACTCACTGCGATTTTCTTCTATCCTCTCCACAGTACAGAGGAGTAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 90 bp GACTATCATGTGAATGGGGTTTCAGGAAGGAGAGGAGAAAGCACATaGTTTGACAATTCTAACACTGATCAGAAACTCAGTCCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: DYHVNGVSGRRGEST*FDNSNTDQKLSPVF
Trigger: GAAAACAGGACTGAGTTTCTGATCAGTGTTAGAATTGTCAAAGCATGTGCTTTCTCCTCTCCTTCCTGAAACCCCATTCACATGATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS-3UTR CAA 90 bp TTTAGGAGTTGGGTTCAAGGCACCCCCTCAAGCTTTGATAGTTATCTATGGAAGTTCTGGATCTCGAAATaGTTTTTCAACCACTTCGTG +
Preference number: 5 (lower is better)
Translates to: FRSWVQGTPSSFDSYLWKFWISK*FFNHFV
Trigger: CACGAAGTGGTTGAAAAACAATTTCGAGATCCAGAA...CTTCCATAGATAACTATCAAAGCTTGAGGGGGTGCCTTGAACCCAACTCCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449768.2
ENST00000680685.1
CDS-3UTR CAA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGCGGACAATCTGGATCTaGGCTGTTGATTGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQERTIWI*AVDCRK
Trigger: CTTCCGACAATCAACAGCCAAGATCCAGATTGTCCG...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AAATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGAAGCTGACACTTTCGTaGAGGACTTTGGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: KSLAMLKLNSISSPITSLKLTLS*RTLDFR
Trigger: TCTGAAATCCAAAGTCCTCAACGAAAGTGTCAGCTT...CAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATCACTGGCCATGTTAAAATTGAACTCAATTTCCAGCCCCATCACCTCCTTGGAGATGAGAACATCTCATaGACAATAGGATGGATCCTA +
Preference number: 5 (lower is better)
Translates to: ITGHVKIELNFQPHHLLGDENIS*TIGWIL
Trigger: TAGGATCCATCCTATTGTCAATGAGATGTTCTCATC...TCCAAGGAGGTGATGGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp AAATTCCAATGCTTTAACCACATGCTTGGTCTTTCTGGCTTGGCCAACTCCTTCGATGAGAACATCTCATaGACAATAGGATGGATCCTA +
Preference number: 5 (lower is better)
Translates to: KFQCFNHMLGLSGLANSFDENIS*TIGWIL
Trigger: TAGGATCCATCCTATTGTCAATGAGATGTTCTCATC...GAAGGAGTTGGCCAAGCCAGAAAGACCAAGCATGTGGTTAAAGCATTGGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GTCCACAGTCATCTTTGTAGCCACCTTCAAGTTACAGGTAGCCACATGACATTTAAAGGGTTTGCAGTCTaGATTGATTTCAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: VHSHLCSHLQVTGSHMTFKGFAV*IDFKKS
Trigger: GGACTTCTTGAAATCAATCAAGACTGCAAACCCTTT...AAATGTCATGTGGCTACCTGTAACTTGAAGGTGGCTACAAAGATGACTGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTGTAAAGAGCTTTGCTTaGAAGACACAGAGGATTCCT +
Preference number: 5 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSVKSFA*KTQRIP
Trigger: AGGAATCCTCTGTGTCTTCAAAGCAAAGCTCTTTAC...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAAAAAGTCTTTTGATTaGGCAAGAGGATACTCCTGG +
Preference number: 5 (lower is better)
Translates to: GCYSRRSSLIQACYRAISKKSFD*ARGYSW
Trigger: CCAGGAGTATCCTCTTGCCAAATCAAAAGACTTTTT...GGAAATAGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TGGTGGAGAGAACCAAGTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGAAACTCTAGAATTTTaGAAGCTGTGTGCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: WWREPSISGGRISWWNISETLEF*KLCARN
Trigger: GTTCCTAGCACACAGCTTCAAAAATTCTAGAGTTTC...TGATATATTCCACCAGGATATCCTCCCTCCAGATATACTTGGTTCTCTCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GCACCTAGACCTTCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGCTGGCCATGTTAAAATaGAACTCAATTTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: APRPSSIFKAKAQGKSLLLAMLK*NSISSP
Trigger: GGGGCTGGAAATTGAGTTCAATTTTAACATGGCCAG...CAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGAAGGTCTAGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ACGGTGAGCCGAGTCTTTAAAAGCGATTGCCAGATGATCTCTAGAAGTTTCTTTAGTAGGAGAAGTTCTTaGATTCAAGCCTGTTACAGG +
Preference number: 5 (lower is better)
Translates to: TVSRVFKSDCQMISRSFFSRRSS*IQACYR
Trigger: CCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACT...AAAGAAACTTCTAGAGATCATCTGGCAATCGCTTTTAAAGACTCGGCTCACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATTGTATTTGCCAAAAGCGTTTTGAAAGCTGTTAATTGCTATACTCATGAAGGCTCTGAAGACTTTTGGTaGTCACTGGGAGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: IVFAKSVLKAVNCYTHEGSEDFW*SLGEEG
Trigger: GCCCTCCTCTCCCAGTGACAACCAAAAGTCTTCAGA...GCCTTCATGAGTATAGCAATTAACAGCTTTCAAAACGCTTTTGGCAAATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp ATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTAGGGAGGGCTTTGGAGAGAAAATCACTGTGTTCTaGACCTTTGGGTATCTTTTC +
Preference number: 5 (lower is better)
Translates to: ILVEYIRYILVGREGFGEKITVF*TFGYLF
Trigger: GAAAAGATACCCAAAGGTCAAGAACACAGTGATTTT...CTCTCCAAAGCCCTCCCTACCTACCAAGATATACCTGATATATTCCACCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp GTATATCTGGAGGGAGGATATCCTGGTGGAATATATCAGGTATATCTTGGTAGGTATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: VYLEGGYPGGIYQVYLGRYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...CCTACCAAGATATACCTGATATATTCCACCAGGATATCCTCCCTCCAGATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp TTCTTTGATTCAAGCCTGTTACAGGGCTATTTCCAGACAACGCCTCCTTTAGATTATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: FFDSSLLQGYFQTTPPLDYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...ATCTAAAGGAGGCGTTGTCTGGAAATAGCCCTGTAACAGGCTTGAATCAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS TCA 90 bp CAGTTCCCAAGGCAATTATTCTCCTGCCTTTTATACATGAACAACTaGTGGGCTAGTTACAAGTTACCTGCTTCTCAGGTCAATTTCCTA +
Preference number: 5 (lower is better)
Translates to: QFPRQLFSCLLYMNN*WASYKLPASQVNFL
Trigger: TAGGAAATTGACCTGAGAAGCAGGTAACTTGTAACTAGCCCATCAGTTGTTCATGTATAAAAGGCAGGAGAATAATTGCCTTGGGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680514.1
ENST00000681023.1
CDS CCA 90 bp TTTCAGCCATTGCCAGCATATTTTATCTCCACTCACATTATTGGTTaGGTCAACTGGATCCAAGATTACTGGCCTGTGTATTCCATTAGA +
Preference number: 5 (lower is better)
Translates to: FQPLPAYFISTHIIG*VNWIQDYWPVYSIR
Trigger: TCTAATGGAATACACAGGCCAGTAATCTTGGATCCAGTTGACCCAACCAATAATGTGAGTGGAGATAAAATATGCTGGCAATGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS-3UTR CAA 90 bp TCAAGTATCTTTAAGGCTAAAGCCCAAGGAAAAAGTCTTTTGATTTGGCAAGAGAGGGTACCATCGGAGTaGCCTCTTAAGACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SSIFKAKAQGKSLLIWQERVPSE*PLKTVF
Trigger: GAAAACAGTCTTAAGAGGCAACTCCGATGGTACCCT...CTCTTGCCAAATCAAAAGACTTTTTCCTTGGGCTTTAGCCTTAAAGATACTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATATCTAGGAAGCATTTGTaGGGCTGGAGAAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLISRKHL*GWRNSL
Trigger: CAAGGAGTTTCTCCAGCCCAACAAATGCTTCCTAGA...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp CACAACTTCCTGGTGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAGATGAGAACATCTCATaGACAATAGGATGGATCCTA +
Preference number: 5 (lower is better)
Translates to: HNFLVSALSKKKNIRGRADENIS*TIGWIL
Trigger: TAGGATCCATCCTATTGTCAATGAGATGTTCTCATC...TGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACACCAGGAAGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp ATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTGTTACAGGGCTGAAACTCTAGAATTTTaGAAGCTGTGTGCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: ISGCYSRRSSLIQACYRAETLEF*KLCARN
Trigger: GTTCCTAGCACACAGCTTCAAAAATTCTAGAGTTTC...AGCCCTGTAACAGGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392583.7
ENST00000680122.1
ENST00000680138.1
CDS-3UTR CAA 90 bp GTGTCTGAGTTAATTTCAGGTTGCTACAGTAGGAGAAGTTCTTTGATTCAAGCCTATATCAGGTATATCTaGGTAGGTAGGGAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: VSELISGCYSRRSSLIQAYIRYI*VGREGF
Trigger: AAAGCCCTCCCTACCTACCAAGATATACCTGATATA...GGCTTGAATCAAAGAACTTCTCCTACTGTAGCAACCTGAAATTAACTCAGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS TCA 90 bp AAACAATACAGTTCCCAAGGCAATTATTCTCCTGCCTTTTATACATaGACAACTGATGGGCTAGTTACAAGTTACCTGCTTCTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: KQYSSQGNYSPAFYT*TTDGLVTSYLLLRS
Trigger: TGACCTGAGAAGCAGGTAACTTGTAACTAGCCCATCAGTTGTTCATGTATAAAAGGCAGGAGAATAATTGCCTTGGGAACTGTATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680514.1
ENST00000681023.1
CDS-3UTR CAA 90 bp GAGAGCCTCCAAACAAAGAACTGTCTAGCCCCAAATGTGAGTAAGTATCAAAGTAAAATCACTGTGTTCTaGACCTTTGGGTATCTTTTC +
Preference number: 5 (lower is better)
Translates to: ESLQTKNCLAPNVSKYQSKITVF*TFGYLF
Trigger: GAAAAGATACCCAAAGGTCAAGAACACAGTGATTTT...ACTTTGATACTTACTCACATTTGGGGCTAGACAGTTCTTTGTTTGGAGGCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
CDS-3UTR CAA 90 bp ATTGTATTTGCCAAAAGCGTTTTGAAAGCTGTTAATTGCTATACTCATGAAGGCTTCCTCTGGTTTCCATaGTTTTTGTCCCTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: IVFAKSVLKAVNCYTHEGFLWFP*FLSLAG
Trigger: ACCAGCAAGGGACAAAAACAATGGAAACCAGAGGAA...GCCTTCATGAGTATAGCAATTAACAGCTTTCAAAACGCTTTTGGCAAATACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679877.1
ENST00000680122.1
CDS-3UTR CAA 90 bp TGTCTGCATTGTCTAAAAAGAAAAACATACGTGGGAGAGCAATGTCTCCTAATAAAAATCACTGTGTTCTaGACCTTTGGGTATCTTTTC +
Preference number: 5 (lower is better)
Translates to: CLHCLKRKTYVGEQCLLIKITVF*TFGYLF
Trigger: GAAAAGATACCCAAAGGTCAAGAACACAGTGATTTT...TATTAGGAGACATTGCTCTCCCACGTATGTTTTTCTTTTTAGACAATGCAGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000392583.7
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
CDS CCA 72 bp CACCCAGCACCCAGTAGCTCGGCCTTGCTGCCGCCGTaGAATCTCCTGCCTCCCAGAGACCCAACCTCAGCC +
Preference number: 6 (lower is better)
Translates to: HPAPSSSALLPP*NLLPPRDPTSA
Trigger: GGCTGAGGTTGGGTCTCTGGGAGGCAGGAGATTCCACGGCGGCAGCAAGGCCGAGCTACTGGGTGCTGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 72 bp CCCAACCTCAGCCCTGGACTCACTATGGCCACTCCCTaGACCAGGGGGAACTGTTCGGGTTCCTGCAGGACG +
Preference number: 6 (lower is better)
Translates to: PNLSPGLTMATP*TRGNCSGSCRT
Trigger: CGTCCTGCAGGAACCCGAACAGTTCCCCCTGGTGCAGGGAGTGGCCATAGTGAGTCCAGGGCTGAGGTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CAA 90 bp GTGGGCCTCGCACATAATAGGCACCCAGCACCCAGTAGCTCGGCCTaGCTGCCGCCGTGGAATCTCCTGCCTCCCAGAGACCCAACCTCA +
Preference number: 6 (lower is better)
Translates to: VGLAHNRHPAPSSSA*LPPWNLLPPRDPTS
Trigger: TGAGGTTGGGTCTCTGGGAGGCAGGAGATTCCACGGCGGCAGCAAGGCCGAGCTACTGGGTGCTGGGTGCCTATTATGTGCGAGGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 72 bp CACATAATAGGCACCCAGCACCCAGTAGCTCGGCCTTaGTGCCGCCGTGGAATCTCCTGCCTCCCAGAGACC +
Preference number: 6 (lower is better)
Translates to: HIIGTQHPVARP*CRRGISCLPET
Trigger: GGTCTCTGGGAGGCAGGAGATTCCACGGCGGCAGCAAGGCCGAGCTACTGGGTGCTGGGTGCCTATTATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CAA 72 bp GCACATAATAGGCACCCAGCACCCAGTAGCTCGGCCTaGCTGCCGCCGTGGAATCTCCTGCCTCCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: AHNRHPAPSSSA*LPPWNLLPPRD
Trigger: GTCTCTGGGAGGCAGGAGATTCCACGGCGGCAGCAAGGCCGAGCTACTGGGTGCTGGGTGCCTATTATGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS TCA 72 bp TCACACAGCTCTGGAGCAAGCGCCTGCTCCAGAGCCTaGGACTCCTACACCACATCCCACCCAAGTGTGGGC +
Preference number: 6 (lower is better)
Translates to: SHSSGASACSRA*DSYTTSHPSVG
Trigger: GCCCACACTTGGGTGGGATGTGGTGTAGGAGTCTCAGGCTCTGGAGCAGGCGCTTGCTCCAGAGCTGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 72 bp GCCACTCCCTGCACCAGGGGGAACTGTTCGGGTTCCTaGAGGACGTCACAGATGGTGTTCACCATCTCGTCG +
Preference number: 6 (lower is better)
Translates to: ATPCTRGNCSGS*RTSQMVFTISS
Trigger: CGACGAGATGGTGAACACCATCTGTGACGTCCTGCAGGAACCCGAACAGTTCCCCCTGGTGCAGGGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000449768.2
ENST00000551603.2
ENST00000552756.6
ENST00000620097.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
ENST00000680666.1
ENST00000680685.1
ENST00000680898.1
ENST00000681673.1
CDS CAA 72 bp CAGGCACCGAGGACAGCTGGGACTCCCCATTTCCCATaGCTCTCAGCTGGCTGCCGGCAAGACAGTGAATGG +
Preference number: 6 (lower is better)
Translates to: QAPRTAGTPHFP*LSAGCRQDSEW
Trigger: CCATTCACTGTCTTGCCGGCAGCCAGCTGAGAGCAATGGGAAATGGGGAGTCCCAGCTGTCCTCGGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000449768.2
ENST00000551603.2
ENST00000552756.6
ENST00000680138.1
ENST00000680514.1
ENST00000680685.1
ENST00000681673.1
CDS CAA 72 bp GGGACGTCAGCAGCTCAGGAGGCTAAGAGGATAGTATaGGGCCATCAGGACCCCCACGCCCCCAATTCTAGG +
Preference number: 6 (lower is better)
Translates to: GTSAAQEAKRIV*GHQDPHAPNSR
Trigger: CCTAGAATTGGGGGCGTGGGGGTCCTGATGGCCCAATACTATCCTCTTAGCCTCCTGAGCTGCTGACGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CAA 90 bp AGCAGAGAAGGGACGTCAGCAGCTCAGGAGGCTAAGAGGATAGTATaGGGCCATCAGGACCCCCACGCCCCCAATTCTAGGGTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: SREGTSAAQEAKRIV*GHQDPHAPNSRVLA
Trigger: TGCCAGGACCCTAGAATTGGGGGCGTGGGGGTCCTGATGGCCCAATACTATCCTCTTAGCCTCCTGAGCTGCTGACGTCCCTTCTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 72 bp CGACGAGATCGGCATCAGAGCCAGTCTTCAGAGCTGTaGCTTTGGCGGTTGATCCTCCCTGCTTCTCAGGTC +
Preference number: 6 (lower is better)
Translates to: RRDRHQSQSSEL*LWRLILPASQV
Trigger: GACCTGAGAAGCAGGGAGGATCAACCGCCAAAGGCACAGCTCTGAAGACTGGCTCTGATGCCGATCTCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680138.1
CDS CCA 72 bp GAGCCTGAGACTCCTACACCACATCCCACCCAAGTGTaGGCCTCGCACATAATAGGCACCCAGCACCCAGTA +
Preference number: 6 (lower is better)
Translates to: EPETPTPHPTQV*ASHIIGTQHPV
Trigger: TACTGGGTGCTGGGTGCCTATTATGTGCGAGGCCCACACTTGGGTGGGATGTGGTGTAGGAGTCTCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CCA 72 bp GAGAGGTTAAGTAGCCTGCCCAGTGTCACACAGCTCTaGAGCAAGCGCCTGCTCCAGAGCCTGAGACTCCTA +
Preference number: 6 (lower is better)
Translates to: ERLSSLPSVTQL*SKRLLQSLRLL
Trigger: TAGGAGTCTCAGGCTCTGGAGCAGGCGCTTGCTCCAGAGCTGTGTGACACTGGGCAGGCTACTTAACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CAA 90 bp TCAATTCATCCCTGTTCCAGCCCCCTTCATTCATGCAGGCCACCTTaGTCTTTAAGAGGTGGGCTTCGGCGGCTCCTCTCAGACTGTAGC +
Preference number: 6 (lower is better)
Translates to: SIHPCSSPLHSCRPP*SLRGGLRRLLSDCS
Trigger: GCTACAGTCTGAGAGGAGCCGCCGAAGCCCACCTCTTAAAGACAAAGGTGGCCTGCATGAATGAAGGGGGCTGGAACAGGGATGAATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS TCA 72 bp CAGGGCTGGGGACACCACGTGTCTAGATTTCTTTATTaGGGCACTAGCGGATGTGTGCAAGGGGTAGAGACC +
Preference number: 6 (lower is better)
Translates to: QGWGHHVSRFLY*GTSGCVQGVET
Trigger: GGTCTCTACCCCTTGCACACATCCGCTAGTGCCTCAATAAAGAAATCTAGACACGTGGTGTCCCCAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CCA 72 bp GGGGGAACTGTTCGGGTTCCTGCAGGACGTCACAGATaGTGTTCACCATCTCGTCGATCAGTGTCTGACATT +
Preference number: 6 (lower is better)
Translates to: GGTVRVPAGRHR*CSPSRRSVSDI
Trigger: AATGTCAGACACTGATCGACGAGATGGTGAACACCATCTGTGACGTCCTGCAGGAACCCGAACAGTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000342315.8
ENST00000392583.7
ENST00000449768.2
ENST00000551603.2
ENST00000552756.6
ENST00000620097.2
ENST00000679877.1
ENST00000680122.1
ENST00000680138.1
ENST00000680514.1
ENST00000680666.1
ENST00000680685.1
ENST00000680898.1
ENST00000681673.1
CDS CCA 72 bp CCAGTGACCTTCAATGAGACAGTTCACTCATTGCCCTaGGGCTATTGGTGCCATTTCCCAGGCCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PVTFNETVHSLP*GYWCHFPGPSS
Trigger: AGAAGAGGGGCCTGGGAAATGGCACCAATAGCCCCAGGGCAATGAGTGAACTGTCTCATTGAAGGTCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CCA 72 bp CCACCCATGGTGGCTGCCATTCTTCTGGTCCAGCACTaGCTTGATAGGGCAAGGCTGAGATCTCATTCCAAA +
Preference number: 6 (lower is better)
Translates to: PPMVAAILLVQH*LDRARLRSHSK
Trigger: TTTGGAATGAGATCTCAGCCTTGCCCTATCAAGCCAGTGCTGGACCAGAAGAATGGCAGCCACCATGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS CAA 72 bp GAAAGAGGCCTGGAGTGGGAATCCGGCAACTTGAATTaGGATTCCTGCAGCTCCTCCAAGCTGCTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: ERGLEWESGNLN*DSCSSSKLLRD
Trigger: ATCCCTCAGCAGCTTGGAGGAGCTGCAGGAATCCAAATTCAAGTTGCCGGATTCCCACTCCAGGCCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS CAA 72 bp TTTGGGGAAAGAGGCCTGGAGTGGGAATCCGGCAACTaGAATTTGGATTCCTGCAGCTCCTCCAAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: FGERGLEWESGN*NLDSCSSSKLL
Trigger: CAGCAGCTTGGAGGAGCTGCAGGAATCCAAATTCAAGTTGCCGGATTCCCACTCCAGGCCTCTTTCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS GCA 72 bp TCCTCAATTCATCCCTGTTCCAGCCCCCTTCATTCATaGAGGCCACCTTTGTCTTTAAGAGGTGGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: SSIHPCSSPLHS*RPPLSLRGGLR
Trigger: CCGAAGCCCACCTCTTAAAGACAAAGGTGGCCTGCATGAATGAAGGGGGCTGGAACAGGGATGAATTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CCA 72 bp ACTTCCTGGTGTCTGCATTGTCGGCACTTTCCAAGGTaGTATTGGGTTTCCAGTCCCATCCTTGAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: TSWCLHCRHFPR*YWVSSPILEAG
Trigger: CCCTGCTTCAAGGATGGGACTGGAAACCCAATACCACCTTGGAAAGTGCCGACAATGCAGACACCAGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342315.8
CDS CAA 72 bp AGTCAGTTGAGCTGCTTGTGGGAGGCAAAATCTGTTTaGGGGAAAGAGGCCTGGAGTGGGAATCCGGCAACT +
Preference number: 6 (lower is better)
Translates to: SQLSCLWEAKSV*GKEAWSGNPAT
Trigger: AGTTGCCGGATTCCCACTCCAGGCCTCTTTCCCCAAAACAGATTTTGCCTCCCACAAGCAGCTCAACTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS CAA 90 bp AAAATCCCAGTTCTGACAATAGCTATTAACCAAACTTGCCTTAGCTaGCTGGCCTGGGCCAGGGCTGGGGACACCACGTGTCTAGATTTC +
Preference number: 6 (lower is better)
Translates to: KIPVLTIAINQTCLS*LAWARAGDTTCLDF
Trigger: GAAATCTAGACACGTGGTGTCCCCAGCCCTGGCCCAGGCCAGCAAGCTAAGGCAAGTTTGGTTAATAGCTATTGTCAGAACTGGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CCA 72 bp CTGCTGAGGGATTTTGTCTACGACATCAAGCCCCTCTaGCCCTGGGTTTGCTGCTTTACAGAGACATTCTAT +
Preference number: 6 (lower is better)
Translates to: LLRDFVYDIKPL*PWVCCFTETFY
Trigger: ATAGAATGTCTCTGTAAAGCAGCAAACCCAGGGCCAGAGGGGCTTGATGTCGTAGACAAAATCCCTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS TCA 72 bp GAAACTCAGTCCTGTTTTCACTCCAGTGACCTTCAATaGGACAGTTCACTCATTGCCCTGGGGCTATTGGTG +
Preference number: 6 (lower is better)
Translates to: ETQSCFHSSDLQ*DSSLIALGLLV
Trigger: CACCAATAGCCCCAGGGCAATGAGTGAACTGTCTCATTGAAGGTCACTGGAGTGAAAACAGGACTGAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CCA 72 bp TGGATCTGGGTGGGGGTTACACAGTTACATTGTTTGTaGCTACCTATCAAGCTGGACACTTTGATCTGGGCA +
Preference number: 6 (lower is better)
Translates to: WIWVGVTQLHCL*LPIKLDTLIWA
Trigger: TGCCCAGATCAAAGTGTCCAGCTTGATAGGTAGCCACAAACAATGTAACTGTGTAACCCCCACCCAGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS TCA 72 bp TTGCTGCGGAGAAACCACAAGGCAACCTGGGTAGTTTaGACAAAGTTCTCTAGCCTCCCTAAGTTTACTCCT +
Preference number: 6 (lower is better)
Translates to: LLRRNHKATWVV*TKFSSLPKFTP
Trigger: AGGAGTAAACTTAGGGAGGCTAGAGAACTTTGTTCAAACTACCCAGGTTGCCTTGTGGTTTCTCCGCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CCA 72 bp ATTGACAATAGGATGGATCCTAGCTCCACAACTTCCTaGTGTCTGCATTGTCGGCACTTTCCAAGGTGGTAT +
Preference number: 6 (lower is better)
Translates to: IDNRMDPSSTTS*CLHCRHFPRWY
Trigger: ATACCACCTTGGAAAGTGCCGACAATGCAGACACCAGGAAGTTGTGGAGCTAGGATCCATCCTATTGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342315.8
CDS CAA 72 bp CCATTTCCCAGGCCCCTCTTCTCTAGTTGCACAGATTaGTTCTGGCATCAACGCAGAAATTTACGCGTACAT +
Preference number: 6 (lower is better)
Translates to: PFPRPLFSSCTD*FWHQRRNLRVH
Trigger: ATGTACGCGTAAATTTCTGCGTTGATGCCAGAACAAATCTGTGCAACTAGAGAAGAGGGGCCTGGGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CAA 90 bp GAGAATGTTTTGTTTCTGGATCTGGGTGGGGGTTACACAGTTACATaGTTTGTGGCTACCTATCAAGCTGGACACTTTGATCTGGGCACT +
Preference number: 6 (lower is better)
Translates to: ENVLFLDLGGGYTVT*FVATYQAGHFDLGT
Trigger: AGTGCCCAGATCAAAGTGTCCAGCTTGATAGGTAGCCACAAACAATGTAACTGTGTAACCCCCACCCAGATCCAGAAACAAAACATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS TCA 72 bp CCTCTGTACTGTGGAGAGGATAGAAGAAAATCGCAGTaGGTAATCACAGTGAATTCACTGAGCACTGCCAGT +
Preference number: 6 (lower is better)
Translates to: PLYCGEDRRKSQ*VITVNSLSTAS
Trigger: ACTGGCAGTGCTCAGTGAATTCACTGTGATTACTCACTGCGATTTTCTTCTATCCTCTCCACAGTACAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 72 bp CTATTGGTGCCATTTCCCAGGCCCCTCTTCTCTAGTTaGACAGATTTGTTCTGGCATCAACGCAGAAATTTA +
Preference number: 6 (lower is better)
Translates to: LLVPFPRPLFSS*TDLFWHQRRNL
Trigger: TAAATTTCTGCGTTGATGCCAGAACAAATCTGTGCAACTAGAGAAGAGGGGCCTGGGAAATGGCACCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS GCA 72 bp ATTGAGAGGCAGGATAGTGTAGTGGTTAAACATGCATaGCCTCAAGCCAATTACCCAGGCTTAAAATCCCAG +
Preference number: 6 (lower is better)
Translates to: IERQDSVVVKHA*PQANYPGLKSQ
Trigger: CTGGGATTTTAAGCCTGGGTAATTGGCTTGAGGGCATGCATGTTTAACCACTACACTATCCTGCCTCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CAA 90 bp ATCGAGCGGAATGCAATAATTATGGTGAAGGTGCTCATCTGTTCTTaGATGTGTGTTTTCTCCTGCAGGTCTGGCGATCATTGGGTGAAT +
Preference number: 6 (lower is better)
Translates to: IERNAIIMVKVLICS*MCVFSCRSGDHWVN
Trigger: ATTCACCCAATGATCGCCAGACCTGCAGGAGAAAACACACATCAAAGAACAGATGAGCACCTTCACCATAATTATTGCATTCCGCTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680138.1
ENST00000680514.1
ENST00000681023.1
CDS TCA 72 bp GCTAAGAACATGATGTGCTCAAGCCTTACGATACTCTaGAGTGGGTATTATGCCTCTCCCCATTTTACAGAG +
Preference number: 6 (lower is better)
Translates to: AKNMMCSSLTIL*SGYYASPHFTE
Trigger: CTCTGTAAAATGGGGAGAGGCATAATACCCACTTCAGAGTATCGTAAGGCTTGAGCACATCATGTTCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS TCA 72 bp AATTCACTGAGCACTGCCAGTCTTTTGCTAAGAACATaGTGTGCTCAAGCCTTACGATACTCTGAAGTGGGT +
Preference number: 6 (lower is better)
Translates to: NSLSTASLLLRT*CAQALRYSEVG
Trigger: ACCCACTTCAGAGTATCGTAAGGCTTGAGCACATCATGTTCTTAGCAAAAGACTGGCAGTGCTCAGTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 72 bp ATCGCAGTGAGTAATCACAGTGAATTCACTGAGCACTaGCAGTCTTTTGCTAAGAACATGATGTGCTCAAGC +
Preference number: 6 (lower is better)
Translates to: IAVSNHSEFTEH*QSFAKNMMCSS
Trigger: GCTTGAGCACATCATGTTCTTAGCAAAAGACTGGCAGTGCTCAGTGAATTCACTGTGATTACTCACTGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CAA 90 bp CTATTGGTGCCATTTCCCAGGCCCCTCTTCTCTAGTTGCACAGATTaGTTCTGGCATCAACGCAGAAATTTACGCGTACATAATAACATT +
Preference number: 6 (lower is better)
Translates to: LLVPFPRPLFSSCTD*FWHQRRNLRVHNNI
Trigger: AATGTTATTATGTACGCGTAAATTTCTGCGTTGATGCCAGAACAAATCTGTGCAACTAGAGAAGAGGGGCCTGGGAAATGGCACCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CAA 90 bp ATGTTTTGTTTCTGGATCTGGGTGGGGGTTACACAGTTACATTGTTaGTGGCTACCTATCAAGCTGGACACTTTGATCTGGGCACTTTTT +
Preference number: 6 (lower is better)
Translates to: MFCFWIWVGVTQLHC*WLPIKLDTLIWALF
Trigger: AAAAAGTGCCCAGATCAAAGTGTCCAGCTTGATAGGTAGCCACAAACAATGTAACTGTGTAACCCCCACCCAGATCCAGAAACAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS GCA 72 bp CTCAAAGGAGAAGGAGATTCTAAGCTCCTTAGAATCTaGAGTGGGTTCAATGGTGGACCCCTAAAAATACAT +
Preference number: 6 (lower is better)
Translates to: LKGEGDSKLLRI*SGFNGGPLKIH
Trigger: ATGTATTTTTAGGGGTCCACCATTGAACCCACTGCAGATTCTAAGGAGCTTAGAATCTCCTTCTCCTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681023.1
CDS CAA 72 bp AACCAAATATTTCTAACTGATAAAAGCCACTCCTTCTaGCTGCGGAGAAACCACAAGGCAACCTGGGTAGTT +
Preference number: 6 (lower is better)
Translates to: NQIFLTDKSHSF*LRRNHKATWVV
Trigger: AACTACCCAGGTTGCCTTGTGGTTTCTCCGCAGCAAGAAGGAGTGGCTTTTATCAGTTAGAAATATTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS TCA 72 bp TTGGTAAACTTTCCGGACAATCTGGATCTTGGCTGTTaGTTGTCGGAAGCAGTTTTCTTTAAGGAATGTACG +
Preference number: 6 (lower is better)
Translates to: LVNFPDNLDLGC*LSEAVFFKECT
Trigger: CGTACATTCCTTAAAGAAAACTGCTTCCGACAATCAACAGCCAAGATCCAGATTGTCCGGAAAGTTTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680138.1
ENST00000680514.1
CDS TCA 72 bp CTCTCAGACATCCCGTTGAGCCAAAGAAGGCAGACATaGAGTATGTACCATATAATCCCACTTACATTGTTT +
Preference number: 6 (lower is better)
Translates to: LSDIPLSQRRQT*SMYHIIPLTLF
Trigger: AAACAATGTAAGTGGGATTATATGGTACATACTTCATGTCTGCCTTCTTTGGCTCAACGGGATGTCTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681673.1
CDS TCA 72 bp TACATTGTTTGTGGCTACCTATCAAGCTGGACACTTTaGTCTGGGCACTTTTTCTGTTTTACTTCCATGAGG +
Preference number: 6 (lower is better)
Translates to: YIVCGYLSSWTL*SGHFFCFTSMR
Trigger: CCTCATGGAAGTAAAACAGAAAAAGTGCCCAGATCAAAGTGTCCAGCTTGATAGGTAGCCACAAACAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CCA 72 bp TTGCCAGCATATTTTATCTCCACTCACATTATTGGTTaGGTCAACTGGATCCAAGATTACTGGCCTGTGTAT +
Preference number: 6 (lower is better)
Translates to: LPAYFISTHIIG*VNWIQDYWPVY
Trigger: ATACACAGGCCAGTAATCTTGGATCCAGTTGACCCAACCAATAATGTGAGTGGAGATAAAATATGCTGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680898.1
CDS CAA 72 bp TTACATTGTTTGTGGCTACCTATCAAGCTGGACACTTaGATCTGGGCACTTTTTCTGTTTTACTTCCATGAG +
Preference number: 6 (lower is better)
Translates to: LHCLWLPIKLDT*IWALFLFYFHE
Trigger: CTCATGGAAGTAAAACAGAAAAAGTGCCCAGATCAAAGTGTCCAGCTTGATAGGTAGCCACAAACAATGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680666.1
CDS CCA 72 bp TATTTTATCTCCACTCACATTATTGGTTGGGTCAACTaGATCCAAGATTACTGGCCTGTGTATTCCATTAGA +
Preference number: 6 (lower is better)
Translates to: YFISTHIIGWVN*IQDYWPVYSIR
Trigger: TCTAATGGAATACACAGGCCAGTAATCTTGGATCCAGTTGACCCAACCAATAATGTGAGTGGAGATAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680898.1