RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NYAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000144460

Ensembl transcript IDs: ENST00000272907.7, ENST00000636099.1

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTAAGTTGAATGCTAAGTCAGAGGAGTTCAGAGCAGTGTTCATATaGGCTATGCTTACCACTTCATCTCTAGAGTATAGGAATGCATGT +
Preference number: 1 (lower is better)
Translates to: LKLNAKSEEFRAVFI*AMLTTSSLEYRNAC
Trigger: ACATGCATTCCTATACTCTAGAGATGAAGTGGTAAGCATAGCTCATATGAACACTGCTCTGAACTCCTCTGACTTAGCATTCAACTTAAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATaGTGTAAAGGATTAAATGATATTTCAGTTTATGCCTTTATTTCT +
Preference number: 1 (lower is better)
Translates to: PSTTTYPNEHQSNIL*CKGLNDISVYAFIS
Trigger: AGAAATAAAGGCATAAACTGAAATATCATTTAATCCTTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGAGGTGGGAAGCATTTaGCAAGTTGTATCACAGGAA +
Preference number: 2 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCEVGSI*QVVSQE
Trigger: TTCCTGTGATACAACTTGCCAAATGCTTCCCACCTC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCAGGACAGACAGAGGTaGGAAGCATTTGGCAAGTTG +
Preference number: 2 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPQDRQR*EAFGKL
Trigger: CAACTTGCCAAATGCTTCCCACCTCTGTCTGTCCTG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTCTCCAAGTGATAATTaGGATCTCATTTACCATGCA +
Preference number: 2 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSSPSDN*DLIYHA
Trigger: TGCATGGTAAATGAGATCTCAATTATCACTTGGAGA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTACTTGAGATACCCTTaGGAGAAGCCTCTCATTTCT +
Preference number: 2 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCYLRYP*EKPLIS
Trigger: AGAAATGAGAGGCTTCTCTCAAGGGTATCTCAAGTA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCTCATTTACCATGCATaGACACTTACATTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCLIYHA*TLTFPF
Trigger: GAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCATTCTAAATGGTACTTaGGATACCCTTGAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCILNGT*DTLERS
Trigger: GCTTCTCTCAAGGGTATCTCAAGTACCATTTAGAAT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTATGTACAAATTCATTaGCAACATCTGTGCGAGTGT +
Preference number: 2 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCYVQIH*QHLCEC
Trigger: ACACTCGCACAGATGTTGTCAATGAATTTGTACATA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAGATCTCATTTACCATaGATGAACACTTACATTCCC +
Preference number: 2 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCRSHLP*MNTYIP
Trigger: GGGAATGTAAGTGTTCATGCATGGTAAATGAGATCT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCAGGACAGACAGAGGTaGGAAGCATTTGGCAAGTTG +
Preference number: 2 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFQDRQR*EAFGKL
Trigger: CAACTTGCCAAATGCTTCCCACCTCTGTCTGTCCTG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATATGTACAAATTCATTaGCAACATCTGTGCGAGTGT +
Preference number: 2 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKYVQIH*QHLCEC
Trigger: ACACTCGCACAGATGTTGTCAATGAATTTGTACATA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR TCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCATTCTAAATGGTACTTaGGATACCCTTGAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPILNGT*DTLERS
Trigger: GCTTCTCTCAAGGGTATCTCAAGTACCATTTAGAAT...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTCTGTGCGAGTGTTCTaGACAAAACATTTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCSVRVF*TKHLKR
Trigger: TCTTTTTAAATGTTTTGTCCAGAACACTCGCACAGA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGAGGTGGGAAGCATTTaGCAAGTTGTATCACAGGAA +
Preference number: 2 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFEVGSI*QVVSQE
Trigger: TTCCTGTGATACAACTTGCCAAATGCTTCCCACCTC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCAGAGGTGGGAAGCATTaGGCAAGTTGTATCACAGGA +
Preference number: 3 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSRGGKH*ASCITG
Trigger: TCCTGTGATACAACTTGCCAAATGCTTCCCACCTCT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAGAGGTGGGAAGCATTaGGCAAGTTGTATCACAGGA +
Preference number: 3 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCRGGKH*ASCITG
Trigger: TCCTGTGATACAACTTGCCAAATGCTTCCCACCTCT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAAGCAAATGCGAAAGTaGTCTACAGCAACAGGACAG +
Preference number: 3 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCKQMRK*STATGQ
Trigger: CTGTCCTGTTGCTGTAGACAACTTTCGCATTTGCTT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGCAAATGCGAAAGTaGTCTACAGCAACAGGACAG +
Preference number: 3 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPKQMRK*STATGQ
Trigger: CTGTCCTGTTGCTGTAGACAACTTTCGCATTTGCTT...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGAAGCCTCTCATTTCTaGTATTTGCAGATACCTCAT +
Preference number: 3 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCEASHF*YLQIPH
Trigger: ATGAGGTATCTGCAAATACAAGAAATGAGAGGCTTC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGCTTTCATTGAGAGTTaGAAGGGGCTTAGGGTGAAA +
Preference number: 3 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPAFIES*KGLRVK
Trigger: TTTCACCCTAAGCCCCTTCAAACTCTCAATGAAAGC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR TCA 72 bp AATGCTAAGTCAGAGGAGTTCAGAGCAGTGTTCATATaGGCTATGCTTACCACTTCATCTCTAGAGTATAGG +
Preference number: 3 (lower is better)
Translates to: NAKSEEFRAVFI*AMLTTSSLEYR
Trigger: CCTATACTCTAGAGATGAAGTGGTAAGCATAGCTCATATGAACACTGCTCTGAACTCCTCTGACTTAGCATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGTATTGAATTCCTATaGGGTGAGCTAAAGATAGGA +
Preference number: 3 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCCIEFL*GELKIG
Trigger: TCCTATCTTTAGCTCACCCAATAGGAATTCAATACA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR GCA 72 bp ACCACGTACCCAAACGAACATCAGAGCAACATATTATaGTGTAAAGGATTAAATGATATTTCAGTTTATGCC +
Preference number: 3 (lower is better)
Translates to: TTYPNEHQSNIL*CKGLNDISVYA
Trigger: GGCATAAACTGAAATATCATTTAATCCTTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR CCA 72 bp ATATGTAATTTTCTCATCAGTAATGGGCAGTTCCCTTaGAGGTATCATCAGTGTTTTATAAGTTGCTATTTC +
Preference number: 3 (lower is better)
Translates to: ICNFLISNGQFP*RYHQCFISCYF
Trigger: GAAATAGCAACTTATAAAACACTGATGATACCTCCAAGGGAACTGCCCATTACTGATGAGAAAATTACATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGGGACCTCCCCATGCTaGCGGGGGAGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSGTSPC*RGRERW
Trigger: CCACCTCTCCCTCCCCCGTCAGCATGGGGAGGTCCC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGGAGCCACCCGGGGCTaGCCCGTAGGTGTTCACCGC +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSGATRG*PVGVHR
Trigger: GCGGTGAACACCTACGGGGCAGCCCCGGGTGGCTCC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCCAGCGTAGACGGGGGTaGGGGCGACGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSQRRRG*GRRGER
Trigger: GCGCTCTCCTCGTCGCCCCCACCCCCGTCTACGCTG...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCCTCCAGCGGGCTCGTaGGTGTCCGGGACCGGGAGC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCPPAGS*VSGTGS
Trigger: GCTCCCGGTCCCGGACACCCACGAGCCCGCTGGAGG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGGCCACTGGACGACTTaGGCAGCAGGCTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCGHWTT*AAGCGR
Trigger: CCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGGTCTGGGGGTCGAGTaGGGCACTGAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSGLGVE*GTEGEL
Trigger: GAGCTCTCCTTCAGTGCCTCACTCGACCCCCAGACC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGGAGGAGGCACACCTaGCGTCGACGCAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCWRRHT*RRRRPA
Trigger: GGCCGGTCTGCGTCGACGTCAGGTGTGCCTCCTCCA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCCCCAGGGCCGCGGCCTaGTCTTTCTCCAGTTTCGCA +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSPRAAA*SFSSFA
Trigger: TGCGAAACTGGAGAAAGAGCAGGCCGCGGCCCTGGG...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGGAGCCACCCGGGGCTaGCCCGTAGGTGTTCACCGC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKGATRG*PVGVHR
Trigger: GCGGTGAACACCTACGGGGCAGCCCCGGGTGGCTCC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGCGGGGCTGCCCATCTaGGACAAGGAGGAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCAGLPI*DKEESR
Trigger: GCGGGACTCCTCCTTGTCCCAGATGGGCAGCCCCGC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGCATGGCCGGGGACGTaGGACGGCAGCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPAWPGT*DGSVEG
Trigger: GCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAGGAGAGCGCAGGGGTaGCAGAGGCAGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCRRAQG*QRQVPG
Trigger: CCCTGGGACCTGCCTCTGCCACCCCTGCGCTCTCCT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGGAGCGCCGGCCACTaGACGACTTGCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCWSAGH*TTCAAG
Trigger: GCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTGCTGTCATCGTCTGTaGCCCCAACCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSCCHRL*PQPSAG
Trigger: CCCTGCACTCGGTTGGGGGCACAGACGATGACAGCA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGGTCTCCCGCGGGGCTaGCCATCTGGGACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKGLPRG*PSGTRR
Trigger: CCTCCTTGTCCCAGATGGGCAGCCCCGCGGGAGACC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGGCCACTGGACGACTTaGGCAGCAGGCTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPGHWTT*AAGCGR
Trigger: CCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGGGACTCGTCGGAGTTaGGGGAGCAATGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCGTRRS*GSNARG
Trigger: CCCCCGTGCATTGCTCCCCCAACTCCGACGAGTCCC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAAGGAGAGCGCAGGGGTaGCAGAGGCAGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKRRAQG*QRQVPG
Trigger: CCCTGGGACCTGCCTCTGCCACCCCTGCGCTCTCCT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCAGGTGCTCAGCTTGGTaGTGGGGTCCCTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSRCSAW*WGPSWV
Trigger: AACCCAAGAGGGACCCCAGCACCAAGCTGAGCACCT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGGTCTCCCGCGGGGCTaGCCATCTGGGACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPGLPRG*PSGTRR
Trigger: CCTCCTTGTCCCAGATGGGCAGCCCCGCGGGAGACC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAACTTGCGCAGCAGGCTaGGGCCGGAGGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKTCAAG*GRRRRG
Trigger: GCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGCGGGGCTGCCCATCTaGGACAAGGAGGAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPAGLPI*DKEESR
Trigger: GCGGGACTCCTCCTTGTCCCAGATGGGCAGCCCCGC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTGGAGCGCCGGCCACTaGACGACTTGCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPWSAGH*TTCAAG
Trigger: GCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTGGGGAAGTCTGTCCTaGGGAGCAGGCATTGTCATG +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSWGSLS*GAGIVM
Trigger: CATGACAATGCCTGCTCCTCAGGACAGACTTCCCCA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAGCAGCGGGGGTCTGTaGGAAAGCAGGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCSSGGL*ESRLGK
Trigger: CTTCCCCAACCTGCTTTCTCACAGACCCCCGCTGCT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCATGGCACTGAGGCCTTaGCGAAGTCCAAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSMALRP*RSPSQA
Trigger: TGCCTGACTTGGACTTCGCCAAGGCCTCAGTGCCAT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGGGACTCGTCGGAGTTaGGGGAGCAATGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPGTRRS*GSNARG
Trigger: CCCCCGTGCATTGCTCCCCCAACTCCGACGAGTCCC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGGGCGACGCCCCGGCTaGCTGTTTCATGTAAGACAC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCGRRPG*LFHVRH
Trigger: GTGTCTTACATGAAACAGCCAGCCGGGGCGTCGCCC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGCATGGCCGGGGACGTaGGACGGCAGCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFAWPGT*DGSVEG
Trigger: GCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATTCTCCAGTTTCGCATaGCCGGGGACGTGGGACGGC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKFSSFA*PGTWDG
Trigger: GCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCGGAGGAGAAGAGGCTaGTCAGCTCCTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPRRRRG*SAPPAG
Trigger: GCCCGCTGGAGGAGCTGACCAGCCTCTTCTCCTCCG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGGCTGCAGTGCTGCTaGCTGTCTCTGATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCWLQCC*LSLMRC
Trigger: GCACCTCATCAGAGACAGTCAGCAGCACTGCAGCCA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGGGACCTCCCCATGCTaGCGGGGGAGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFGTSPC*RGRERW
Trigger: CCACCTCTCCCTCCCCCGTCAGCATGGGGAGGTCCC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGTTCACCGCGGCGTTaGCCATCTTGGCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCCSPRR*PSWPHL
Trigger: AAGATGGGGCCAAGATGGTCAACGCCGCGGTGAACA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGTTCCATCCCATTCCTaGGCTTTGACAGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSVPSHS*ALTGSL
Trigger: CAGAGAGCCTGTCAAAGCTCAGGAATGGGATGGAAC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTTCCTAGTCGACTGGTaGCCACAGGTGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCFLVDW*PQVSLV
Trigger: CACCAGGGACACCTGTGGTCACCAGTCGACTAGGAA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGTGCCCCCAACCGAGTaGAGGGACTGTGATCTCACA +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCVPPTE*RDCDLT
Trigger: TGTGAGATCACAGTCCCTGCACTCGGTTGGGGGCAC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATGCTGTCATCGTCTGTaGCCCCAACCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKCCHRL*PQPSAG
Trigger: CCCTGCACTCGGTTGGGGGCACAGACGATGACAGCA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATCCGTGAGCCACAGCTaGTGTCATCGTCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKSVSHS*CHRLCP
Trigger: GGGGCACAGACGATGACAGCAGCTGTGGCTCACGGA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAGCTCCTTGAGAGGCTaGCCGAATGCACAGCGTCGT +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCSSLRG*PNAQRR
Trigger: ACGACGCTGTGCATTCGGGCAGCCTCTCAAGGAGCT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAATCTTGGCCCCATCTTaGGACACGGGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKILAPS*DTGLGV
Trigger: GACCCCCAGACCCGTGTCGCAAGATGGGGCCAAGAT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTGCCTCCACCCTCCCTaGACAGCCGAGCCATGCACA +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPCLHPP*TAEPCT
Trigger: TGTGCATGGCTCGGCTGTGCAGGGAGGGTGGAGGCA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGGTCGAAGTCACATTTaGCGTCTTGGCCCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSGRSHI*RLGPSR
Trigger: ACGACTTGGGCCAAGACGCCAAATGTGACTTCGACC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCAGCGTAGACGGGGGTaGGGGCGACGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFQRRRG*GRRGER
Trigger: GCGCTCTCCTCGTCGCCCCCACCCCCGTCTACGCTG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTCTCTGCAGGCTCTTTaGAGCGCCGGCCACTGGACG +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPSLQAL*SAGHWT
Trigger: CGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTTCCCGCTAACAAGGTaGGGCTCACAGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSFPLTR*GSQSIF
Trigger: GAAGATGCTCTGTGAGCCCCACCTTGTTAGCGGGAA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATGGTGGTTGTCTCCGTaGGCCACAGCTGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKWWLSP*ATAAVI
Trigger: GATGACAGCAGCTGTGGCTCACGGAGACAACCACCA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATGGCTGCAGTGCTGCTaGCTGTCTCTGATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKWLQCC*LSLMRC
Trigger: GCACCTCATCAGAGACAGTCAGCAGCACTGCAGCCA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGGGTCTTGGTTTAGCTaGCGCTTCAGTCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCGSWFS*RFSPLR
Trigger: CCTGAGAGGACTGAAGCGTCAGCTAAACCAAGACCC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCCCATTCCTGAGCTTTaGCAGGCTCTCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCPIPEL*QALWRK
Trigger: CTTCCTCCAGAGAGCCTGTCAAAGCTCAGGAATGGG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTGGAGGAGGCACACCTaGCGTCGACGCAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFWRRHT*RRRRPA
Trigger: GGCCGGTCTGCGTCGACGTCAGGTGTGCCTCCTCCA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGCAATCCGTCTGCATTaGACGGCAAGGCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPAIRLH*TARLPA
Trigger: CGCTGGCAGCCTTGCCGTTCAATGCAGACGGATTGC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCTGTCTCTGATGAGGTaGTCAGCTTGGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCLSLMR*SAWCWG
Trigger: ACCCCAGCACCAAGCTGAGCACCTCATCAGAGACAG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGTCCTCCGGGGCCCATaGTTTTTGATGTACGTTTCA +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSVLRGP*FLMYVS
Trigger: TGAAACGTACATCAAAAAGCATGGGCCCCGGAGGAC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCATCTTGGCCCCATCTTaGGACACGGGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPILAPS*DTGLGV
Trigger: GACCCCCAGACCCGTGTCGCAAGATGGGGCCAAGAT...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTTGGTAATGGCTCCGTaGTGTGGCTTCGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSLVMAP*CGFGLS
Trigger: TGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGGTACCTGGCTCTGTTaGAGGTCACTGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCGTWLC*RSLLCL
Trigger: CAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTCACAGAAAAGCCACTaGAGCAAGGATGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSSQKSH*SKDGEV
Trigger: GACTTCCCCATCCTTGCTCCAGTGGCTTTTCTGTGA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCAACGATGATGGTACCTaGCTCTGTTGCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSNDDGT*LCCRSL
Trigger: CAGTGACCTGCAACAGAGCCAGGTACCATCATCGTT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGGATTTCGGCTCCCTaGGGGCTCCCATCCTCATTA +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCWISAP*GLPSSL
Trigger: TAATGAGGATGGGAGCCCCCAGGGAGCCGAAATCCA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGCTAGGAAGATGCAGTaGCGGAAGACAGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCARKMQ*RKTGAC
Trigger: GCAAGCACCTGTCTTCCGCCACTGCATCTTCCTAGC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGCCCTCTCTCACGGTTaGTCTCAGGGCAGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKALSHG*SQGSSV
Trigger: TACAGAACTGCCCTGAGATCAACCGTGAGAGAGGGC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGGGGCCCATGCTTTTTaGTGTACGTTTCATCGAAAG +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSGAHAF*CTFHRK
Trigger: CTTTCGATGAAACGTACATCAAAAAGCATGGGCCCC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAACCCATTCCTGAGCTTTaGCAGGCTCTCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKPIPEL*QALWRK
Trigger: CTTCCTCCAGAGAGCCTGTCAAAGCTCAGGAATGGG...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTTCCTAGTCGACTGGTaGCCACAGGTGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPFLVDW*PQVSLV
Trigger: CACCAGGGACACCTGTGGTCACCAGTCGACTAGGAA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAAATCTCCTGACCTTGTaGTCCACCCACCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKNLLTL*STHLCL
Trigger: GAGGCAGAGGTGGGTGGATCACAAGGTCAGGAGATT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTACTTGCGCAGCAGGCTaGGGCCGGAGGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFTCAAG*GRRRRG
Trigger: GCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGGTACCTGGCTCTGTTaGAGGTCACTGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKGTWLC*RSLLCL
Trigger: CAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGGTCGAAGTCACATTTaGCGTCTTGGCCCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCGRSHI*RLGPSR
Trigger: ACGACTTGGGCCAAGACGCCAAATGTGACTTCGACC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAATGGCACTGAGGCCTTaGCGAAGTCCAAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKMALRP*RSPSQA
Trigger: TGCCTGACTTGGACTTCGCCAAGGCCTCAGTGCCAT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCGGAGGAGAAGAGGCTaGTCAGCTCCTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFRRRRG*SAPPAG
Trigger: GCCCGCTGGAGGAGCTGACCAGCCTCTTCTCCTCCG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGGGTCTTGGTTTAGCTaGCGCTTCAGTCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPGSWFS*RFSPLR
Trigger: CCTGAGAGGACTGAAGCGTCAGCTAAACCAAGACCC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGGTCTGGGGGTCGAGTaGGGCACTGAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFGLGVE*GTEGEL
Trigger: GAGCTCTCCTTCAGTGCCTCACTCGACCCCCAGACC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAATCTCCTGACCTTGTaGTCCACCCACCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPNLLTL*STHLCL
Trigger: GAGGCAGAGGTGGGTGGATCACAAGGTCAGGAGATT...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTTGGTAATGGCTCCGTaGTGTGGCTTCGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCLVMAP*CGFGLS
Trigger: TGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAATTGAACGGCAAGGCTaGCAGCGTTCTAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKIERQG*QRSSTL
Trigger: CAAGGTGCTAGAACGCTGGCAGCCTTGCCGTTCAAT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTTCTCCAGTTTCGCATaGCCGGGGACGTGGGACGGC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFFSSFA*PGTWDG
Trigger: GCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCTTGCGACACGGGTCTaGGGGTCGAGTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFLATRV*GSSEAL
Trigger: CAGTGCCTCACTCGACCCCCAGACCCGTGTCGCAAG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTCTCTGCAGGCTCTTTaGAGCGCCGGCCACTGGACG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFSLQAL*SAGHWT
Trigger: CGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGACCACAGGTGTCCCTaGTGTTCCATCCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPDHRCP*CSIPFL
Trigger: CAGGAATGGGATGGAACACCAGGGACACCTGTGGTC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCAGGACAGACAGAGGTaGGAAGCATTTGGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCQDRQR*EAFGKL
Trigger: CAACTTGCCAAATGCTTCCCACCTCTGTCTGTCCTG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAAAGATGTGCTCAGCTaGGTGTTCGGATTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCKDVLS*VFGFRF
Trigger: GAAGCGAAATCCGAACACTCAGCTGAGCACATCTTT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGCGAAGAACAGCTGTaGTGGTCGAAGTCACATTTG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCCEEQL*WSKSHL
Trigger: CAAATGTGACTTCGACCATCACAGCTGTTCTTCGCA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTACTTGAGATACCCTTaGGAGAAGCCTCTCATTTCT +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSYLRYP*EKPLIS
Trigger: AGAAATGAGAGGCTTCTCTCAAGGGTATCTCAAGTA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCAGAGCAGTGTTCATATaGGCTATGCTTACCACTTCA +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSRAVFI*AMLTTS
Trigger: TGAAGTGGTAAGCATAGCTCATATGAACACTGCTCT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCACTTTGCTACACAGATaGTTACAGGACCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSTLLHR*LQDQKQ
Trigger: TTGCTTCTGGTCCTGTAATCATCTGTGTAGCAAAGT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTCCGTGAGCCACAGCTaGTGTCATCGTCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFSVSHS*CHRLCP
Trigger: GGGGCACAGACGATGACAGCAGCTGTGGCTCACGGA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGTCCTCCGGGGCCCATaGTTTTTGATGTACGTTTCA +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKVLRGP*FLMYVS
Trigger: TGAAACGTACATCAAAAAGCATGGGCCCCGGAGGAC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTTCACCACATTCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPFTTFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGAATGTGGTGAA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAATGGCTCCGTGCTGTaGCTTCGGACTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPNGSVL*LRTFSS
Trigger: GGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATT...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAAACGATGATGGTACCTaGCTCTGTTGCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKNDDGT*LCCRSL
Trigger: CAGTGACCTGCAACAGAGCCAGGTACCATCATCGTT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTGGTGGTTGTCTCCGTaGGCCACAGCTGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFWWLSP*ATAAVI
Trigger: GATGACAGCAGCTGTGGCTCACGGAGACAACCACCA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAAAAGATGTGCTCAGCTaGGTGTTCGGATTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKKDVLS*VFGFRF
Trigger: GAAGCGAAATCCGAACACTCAGCTGAGCACATCTTT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGGGGCCCATGCTTTTTaGTGTACGTTTCATCGAAAG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKGAHAF*CTFHRK
Trigger: CTTTCGATGAAACGTACATCAAAAAGCATGGGCCCC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATGCGAAGAACAGCTGTaGTGGTCGAAGTCACATTTG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKCEEQL*WSKSHL
Trigger: CAAATGTGACTTCGACCATCACAGCTGTTCTTCGCA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTGTTCACCGCGGCGTTaGCCATCTTGGCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFCSPRR*PSWPHL
Trigger: AAGATGGGGCCAAGATGGTCAACGCCGCGGTGAACA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCCAGCAGGGAAGAAATTaGATGATTTTACCCACTTTG +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSQQGRN*MILPTL
Trigger: CAAAGTGGGTAAAATCATTCAATTTCTTCCCTGCTG...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGTGCCCCCAACCGAGTaGAGGGACTGTGATCTCACA +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFVPPTE*RDCDLT
Trigger: TGTGAGATCACAGTCCCTGCACTCGGTTGGGGGCAC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTAGGTGCTCAGCTTGGTaGTGGGGTCCCTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFRCSAW*WGPSWV
Trigger: AACCCAAGAGGGACCCCAGCACCAAGCTGAGCACCT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCCCGCTCTTACTGGCTaGAGTGCTGCTGACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFPALTG*SAADCL
Trigger: GAGACAGTCAGCAGCACTGCAGCCAGTAAGAGCGGG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTAGCTCCTTGAGAGGCTaGCCGAATGCACAGCGTCGT +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFSSLRG*PNAQRR
Trigger: ACGACGCTGTGCATTCGGGCAGCCTCTCAAGGAGCT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCGGAAGACAGGTGCTTaGTTCCTTAAATCGACATTC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCRKTGA*FLKSTF
Trigger: GAATGTCGATTTAAGGAAGCAAGCACCTGTCTTCCG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCATATCCTCAATGTACTaGAGAAATGTGTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSISSMY*RNVSKG
Trigger: CCCTTTGGACACATTTCTCCAGTACATTGAGGATAT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTCACAGAAAAGCCACTaGAGCAAGGATGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPSQKSH*SKDGEV
Trigger: GACTTCCCCATCCTTGCTCCAGTGGCTTTTCTGTGA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTATGAGGTGCTCAGCTTaGTGCTGGGGTCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFMRCSA*CWGPSW
Trigger: CCAAGAGGGACCCCAGCACCAAGCTGAGCACCTCAT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATTAGGCTCTGAACTGTaGTTTCCCGCTAACAAGGTG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKLGSEL*FPANKV
Trigger: CACCTTGTTAGCGGGAAACCACAGTTCAGAGCCTAA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGCCCTCTCTCACGGTTaGTCTCAGGGCAGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFALSHG*SQGSSV
Trigger: TACAGAACTGCCCTGAGATCAACCGTGAGAGAGGGC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCTCTCGAGCAATATCTaGCGCATTCTGAATAACCAA +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCLSSNI*RILNNQ
Trigger: TTGGTTATTCAGAATGCGTCAGATATTGCTCGAGAG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTTTCAGTTCCTCTGTTaGTTTCTCTGCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCFQFLC*FLCRLF
Trigger: AAAGAGCCTGCAGAGAAATCAACAGAGGAACTGAAA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAGCCCATGTATGATTTaGCTGTGTGTCAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCSPCMI*LCVRIS
Trigger: AGAGATTCTGACACACAGTCAAATCATACATGGGCT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCAGGGAAGAAATTGAATaGTTTTACCCACTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSREEIE*FYPLCY
Trigger: GTAGCAAAGTGGGTAAAATCATTCAATTTCTTCCCT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAACCTATGCGCTTTATTaGTTCTTCTTGTCTTCGGCG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKTYALY*FFLSSA
Trigger: CGCCGAAGACAAGAAGAAGCAATAAAGCGCATAGGT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCCATGCGGAAATGTTTaGCCACGTAACTTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPPCGNV*PRNFLR
Trigger: ACGAAGGAAGTTACGTGGGCAAACATTTCCGCATGG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCTGTCTCTGATGAGGTaGTCAGCTTGGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFLSLMR*SAWCWG
Trigger: ACCCCAGCACCAAGCTGAGCACCTCATCAGAGACAG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCAGATCTCATTTACCATaGATGAACACTTACATTCCC +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSRSHLP*MNTYIP
Trigger: GGGAATGTAAGTGTTCATGCATGGTAAATGAGATCT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCATTAGTGCAATCCTCTaGCAATTAGCTAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSISAIL*QLAKLL
Trigger: GAGAAGTTTAGCTAATTGGCAGAGGATTGCACTAAT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGAGGAGGAATCTTCTTaGAATATTCATCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKEEESS*NIHRCG
Trigger: CCCACAGCGATGAATATTCCAAGAAGATTCCTCCTC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATCACATTTGGCGTCTTaGCCCAAGTCGTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKSHLAS*PKSSKI
Trigger: TATCTTTGACGACTTGGGCCAAGACGCCAAATGTGA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGAAGACGCCCCATGGTaGCCTCTTTCCTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFEDAPW*PLSLLS
Trigger: GGACAACAAGGAAAGAGGCCACCATGGGGCGTCTTC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGAGGAAGACGCCCCATaGTGGCCTCTTTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFEEDAP*WPLSLL
Trigger: CAACAAGGAAAGAGGCCACCATGGGGCGTCTTCCTC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGACCACAGGTGTCCCTaGTGTTCCATCCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFDHRCP*CSIPFL
Trigger: CAGGAATGGGATGGAACACCAGGGACACCTGTGGTC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGAGGTGGGAAGCATTTaGCAAGTTGTATCACAGGAA +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKEVGSI*QVVSQE
Trigger: TTCCTGTGATACAACTTGCCAAATGCTTCCCACCTC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGGCATCGTTCTACTTTaGATTTCGGCTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFGIVLL*ISAPWG
Trigger: CCCCCAGGGAGCCGAAATCCAAAGTAGAACGATGCC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTGCATTGTGTCTGGATaGGAAAAGTGTCGACTCCCA +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPCIVSG*EKCRLP
Trigger: TGGGAGTCGACACTTTTCCCATCCAGACACAATGCA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR TCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCTGACAGCCCATGTATaGTTTGACTGTGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPLTAHV*FDCVSE
Trigger: TTCTGACACACAGTCAAATCATACATGGGCTGTCAG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAAGAGCAGTGTTCATATaGGCTATGCTTACCACTTCA +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKRAVFI*AMLTTS
Trigger: TGAAGTGGTAAGCATAGCTCATATGAACACTGCTCT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGTAAAGAGGAACACTaGCAAAATTTAAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCCKEEH*QNLSPQ
Trigger: CTGGGGACTTAAATTTTGGCAGTGTTCCTCTTTACA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTTCACCACATTCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFFTTFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGAATGTGGTGAA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGAATATTCATCGCTGTaGGGTCTTGGTTTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPEYSSL*GLGLAD
Trigger: GTCAGCTAAACCAAGACCCCACAGCGATGAATATTC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTCACATTTGGCGTCTTaGCCCAAGTCGTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPSHLAS*PKSSKI
Trigger: TATCTTTGACGACTTGGGCCAAGACGCCAAATGTGA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTAATGGCTCCGTGCTGTaGCTTCGGACTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFNGSVL*LRTFSS
Trigger: GGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGAAGTCAATCACGATTaGCTAACGATGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKEVNHD*LTMMVP
Trigger: AGGTACCATCATCGTTAGCCAATCGTGATTGACTTC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTCTGTGCGAGTGTTCTaGACAAAACATTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSSVRVF*TKHLKR
Trigger: TCTTTTTAAATGTTTTGTCCAGAACACTCGCACAGA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAACTCATTTACCATGCATaGACACTTACATTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKLIYHA*TLTFPF
Trigger: GAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAG...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAATTCTAAATGGTACTTaGGATACCCTTGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKILNGT*DTLERS
Trigger: GCTTCTCTCAAGGGTATCTCAAGTACCATTTAGAAT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTTTCTTGACTTAAGTTaGATGCTAAGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCFLDLS*MLSQRS
Trigger: ACTCCTCTGACTTAGCATTCAACTTAAGTCAAGAAA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATGTAAAGAGGAACACTaGCAAAATTTAAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKCKEEH*QNLSPQ
Trigger: CTGGGGACTTAAATTTTGGCAGTGTTCCTCTTTACA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCATTAGTGCAATCCTCTaGCAATTAGCTAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCISAIL*QLAKLL
Trigger: GAGAAGTTTAGCTAATTGGCAGAGGATTGCACTAAT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAACTGGGCTTTCTCCCTTaGTACATTTTGAAAAACGAA +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKLGFLP*YILKNE
Trigger: TTCGTTTTTCAAAATGTAGCAAGGGAGAAAGCCCAG...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTTTCTGCAATCCGTCTaGATTGAACGGCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFFLQSV*IERQGC
Trigger: GCAGCCTTGCCGTTCAATGCAGACGGATTGCAGAAA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR GCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATTTCTTCTCTGTTTCTaGAATCCGTCTGCATTGAAC +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKFLLCF*NPSALN
Trigger: GTTCAATGCAGACGGATTGCAGAAACAGAGAAGAAA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTAGTTTGCTAGGAAGATaGAGTGGCGGAAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFSLLGR*SGGRQV
Trigger: CACCTGTCTTCCGCCACTGCATCTTCCTAGCAAACT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CCA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAATATCCTCAATGTACTaGAGAAATGTGTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKISSMY*RNVSKG
Trigger: CCCTTTGGACACATTTCTCCAGTACATTGAGGATAT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGAAGTCAATCACGATTaGCTAACGATGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPEVNHD*LTMMVP
Trigger: AGGTACCATCATCGTTAGCCAATCGTGATTGACTTC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAAGTGCATTGTGTCTaGATGGGAAAAGTGTCGACT +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPKVHCV*MGKVST
Trigger: AGTCGACACTTTTCCCATCCAGACACAATGCACTTT...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGAGCAGGCATTGTCATaGATCCCATGCGGAAATGTT +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFEQALS*IPCGNV
Trigger: AACATTTCCGCATGGGATTCATGACAATGCCTGCTC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCTACTTCTCCACCTATaGGCTTTATTGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPLLLHL*ALLLLL
Trigger: AAGAAGAAGCAATAAAGCGCATAGGTGGAGAAGTAG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCTGGGCTTTCTCCCTTaGTACATTTTGAAAAACGAA +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPLGFLP*YILKNE
Trigger: TTCGTTTTTCAAAATGTAGCAAGGGAGAAAGCCCAG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTACCTTGGATAGTTCCTaGTCACTAGGCCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFTLDSS*SLGPLE
Trigger: TTCCAATGGGCCTAGTGAGCAGGAACTATCCAAGGT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTTAGGCTCTGAACTGTaGTTTCCCGCTAACAAGGTG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFLGSEL*FPANKV
Trigger: CACCTTGTTAGCGGGAAACCACAGTTCAGAGCCTAA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR CAA 72 bp AAAGAGTTGATAATGCAAAGGCACAAAGGGTATACCTaGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: KELIMQRHKGYT*SLFWKFIPRTC
Trigger: GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATCAACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTATGTACAAATTCATTaGCAACATCTGTGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPYVQIH*QHLCEC
Trigger: ACACTCGCACAGATGTTGTCAATGAATTTGTACATA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTCTCCAAGTGATAATTaGGATCTCATTTACCATGCA +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPSPSDN*DLIYHA
Trigger: TGCATGGTAAATGAGATCTCAATTATCACTTGGAGA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCTGACAGCCCATGTATaGTTTGACTGTGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFLTAHV*FDCVSE
Trigger: TTCTGACACACAGTCAAATCATACATGGGCTGTCAG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTACCTATGCGCTTTATTaGTTCTTCTTGTCTTCGGCG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFTYALY*FFLSSA
Trigger: CGCCGAAGACAAGAAGAAGCAATAAAGCGCATAGGT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAGATCTCATTTACCATaGATGAACACTTACATTCCC +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPRSHLP*MNTYIP
Trigger: GGGAATGTAAGTGTTCATGCATGGTAAATGAGATCT...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGAGGAGGAATCTTCTTaGAATATTCATCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFEEESS*NIHRCG
Trigger: CCCACAGCGATGAATATTCCAAGAAGATTCCTCCTC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTAGCCCATGTATGATTTaGCTGTGTGTCAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFSPCMI*LCVRIS
Trigger: AGAGATTCTGACACACAGTCAAATCATACATGGGCT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR GCA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTTTCTTCAATTAAAGTaGATTGTGTCTGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPFLQLK*IVSGWE
Trigger: TTCCCATCCAGACACAATGCACTTTAATTGAAGAAA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTATTTCACCCCTGGCGTaGCTAATGAAAATGAACAAC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFISPLA*LMKMNN
Trigger: GTTGTTCATTTTCATTAGCCACGCCAGGGGTGAAAT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCTCATTTACCATGCATaGACACTTACATTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFLIYHA*TLTFPF
Trigger: GAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTATTCTAAATGGTACTTaGGATACCCTTGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFILNGT*DTLERS
Trigger: GCTTCTCTCAAGGGTATCTCAAGTACCATTTAGAAT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR TCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTTTCTTGACTTAAGTTaGATGCTAAGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFFLDLS*MLSQRS
Trigger: ACTCCTCTGACTTAGCATTCAACTTAAGTCAAGAAA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
3UTR CAA 72 bp AAGCCTCACAAATTAAGTCAATGTATTGAATTCCTATaGGGTGAGCTAAAGATAGGACATTTATGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: KPHKLSQCIEFL*GELKIGHLCVV
Trigger: CACTACACATAAATGTCCTATCTTTAGCTCACCCAATAGGAATTCAATACATTGACTTAATTTGTGAGGCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CCA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTCCTATCAGATAAAATaGCCTTTAAAGTTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFSYQIK*PLKFAR
Trigger: CCTAGCAAACTTTAAAGGCCATTTTATCTGATAGGA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 90 bp GAGGCAGGTCCCAGGGCCGCGGCCTGCTCTTTCTCCAGTTTCGCATaGCCGGGGACGTGGGACGGCAGCGTGGAGGGCGACGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: EAGPRAAACSFSSFA*PGTWDGSVEGDAPA
Trigger: AGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAAAGAGCAGGCCGCGGCCCTGGGACCTGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp CTCCAGCGGGCTCGTGGGTGTCCGGGACCGGGAGCCACCCGGGGCTaGCCCGTAGGTGTTCACCGCGGCGTTGACCATCTTGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: LQRARGCPGPGATRG*PVGVHRGVDHLGPI
Trigger: GATGGGGCCAAGATGGTCAACGCCGCGGTGAACACCTACGGGGCAGCCCCGGGTGGCTCCCGGTCCCGGACACCCACGAGCCCGCTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 90 bp CACTGGACGACTTGCGCAGCAGGCTGCGGCCGGAGGAGAAGAGGCTaGTCAGCTCCTCCAGCGGGCTCGTGGGTGTCCGGGACCGGGAGC +
Preference number: 5 (lower is better)
Translates to: HWTTCAAGCGRRRRG*SAPPAGSWVSGTGS
Trigger: GCTCCCGGTCCCGGACACCCACGAGCCCGCTGGAGGAGCTGACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp CAGGCTCTTTGGAGCGCCGGCCACTGGACGACTTGCGCAGCAGGCTaGGGCCGGAGGAGAAGAGGCTGGTCAGCTCCTCCAGCGGGCTCG +
Preference number: 5 (lower is better)
Translates to: QALWSAGHWTTCAAG*GRRRRGWSAPPAGS
Trigger: CGAGCCCGCTGGAGGAGCTGACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 90 bp AGGGCCGCGGCCTGCTCTTTCTCCAGTTTCGCATGGCCGGGGACGTaGGACGGCAGCGTGGAGGGCGACGCCCCGGCTGGCTGTTTCATG +
Preference number: 5 (lower is better)
Translates to: RAAACSFSSFAWPGT*DGSVEGDAPAGCFM
Trigger: CATGAAACAGCCAGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAAAGAGCAGGCCGCGGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp TCTCGATGTACACGGGCTCCTCTTCCTCGGGGTCTCCCGCGGGGCTaGCCATCTGGGACAAGGAGGAGTCCCGCGGCAGCGACGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRCTRAPLPRGLPRG*PSGTRRSPAAATSS
Trigger: GGAGGACGTCGCTGCCGCGGGACTCCTCCTTGTCCCAGATGGGCAGCCCCGCGGGAGACCCCGAGGAAGAGGAGCCCGTGTACATCGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp TTGATTTCTCTGCAGGCTCTTTGGAGCGCCGGCCACTGGACGACTTaGGCAGCAGGCTGCGGCCGGAGGAGAAGAGGCTGGTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: LISLQALWSAGHWTT*AAGCGRRRRGWSAP
Trigger: AGGAGCTGACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGAAATCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 90 bp GTTCCTCTGTTGATTTCTCTGCAGGCTCTTTGGAGCGCCGGCCACTaGACGACTTGCGCAGCAGGCTGCGGCCGGAGGAGAAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: VPLLISLQALWSAGH*TTCAAGCGRRRRGW
Trigger: CCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGAAATCAACAGAGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 90 bp GCTCTTTCTCCAGTTTCGCATGGCCGGGGACGTGGGACGGCAGCGTaGAGGGCGACGCCCCGGCTGGCTGTTTCATGTAAGACACGTTTT +
Preference number: 5 (lower is better)
Translates to: ALSPVSHGRGRGTAA*RATPRLAVSCKTRF
Trigger: AAAACGTGTCTTACATGAAACAGCCAGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp GGTCCCTCTTGGGTTTGGGTGGTGGTTGTCTCCGTGAGCCACAGCTaGTGTCATCGTCTGTGCCCCCAACCGAGTGCAGGGACTGTGATC +
Preference number: 5 (lower is better)
Translates to: GPSWVWVVVVSVSHS*CHRLCPQPSAGTVI
Trigger: GATCACAGTCCCTGCACTCGGTTGGGGGCACAGACGATGACAGCAGCTGTGGCTCACGGAGACAACCACCACCCAAACCCAAGAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 90 bp TTGACCATCTTGGCCCCATCTTGCGACACGGGTCTGGGGGTCGAGTaGGGCACTGAAGGAGAGCTCCTTGAGAGGCTGCCCGAATGCACA +
Preference number: 5 (lower is better)
Translates to: LTILAPSCDTGLGVE*GTEGELLERLPECT
Trigger: TGTGCATTCGGGCAGCCTCTCAAGGAGCTCTCCTTCAGTGCCTCACTCGACCCCCAGACCCGTGTCGCAAGATGGGGCCAAGATGGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 90 bp AGTCGACTGGTGACCACAGGTGTCCCTGGTGTTCCATCCCATTCCTaGGCTTTGACAGGCTCTCTGGAGGAAGACGCCCCATGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SRLVTTGVPGVPSHS*ALTGSLEEDAPWWP
Trigger: AGGCCACCATGGGGCGTCTTCCTCCAGAGAGCCTGTCAAAGCTCAGGAATGGGATGGAACACCAGGGACACCTGTGGTCACCAGTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp CTCCGTGAGCCACAGCTGCTGTCATCGTCTGTGCCCCCAACCGAGTaGAGGGACTGTGATCTCACAGAAAAGCCACTGGAGCAAGGATGG +
Preference number: 5 (lower is better)
Translates to: LREPQLLSSSVPPTE*RDCDLTEKPLEQGW
Trigger: CCATCCTTGCTCCAGTGGCTTTTCTGTGAGATCACAGTCCCTGCACTCGGTTGGGGGCACAGACGATGACAGCAGCTGTGGCTCACGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp TGGGTGGTGGTTGTCTCCGTGAGCCACAGCTGCTGTCATCGTCTGTaGCCCCAACCGAGTGCAGGGACTGTGATCTCACAGAAAAGCCAC +
Preference number: 5 (lower is better)
Translates to: WVVVVSVSHSCCHRL*PQPSAGTVISQKSH
Trigger: GTGGCTTTTCTGTGAGATCACAGTCCCTGCACTCGGTTGGGGGCACAGACGATGACAGCAGCTGTGGCTCACGGAGACAACCACCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCCGGCCACTGGACGACTaGCGCAGCAGGCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSRPLDD*RSRLRP
Trigger: CGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCG...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 90 bp AGGAGGAGTCCCGCGGCAGCGACGTCCTCCGGGGCCCATGCTTTTTaGTGTACGTTTCATCGAAAGATGTGCTCAGCTGAGTGTTCGGAT +
Preference number: 5 (lower is better)
Translates to: RRSPAAATSSGAHAF*CTFHRKMCSAECSD
Trigger: ATCCGAACACTCAGCTGAGCACATCTTTCGATGAAACGTACATCAAAAAGCATGGGCCCCGGAGGACGTCGCTGCCGCGGGACTCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp TTGGCTAACGATGATGGTACCTGGCTCTGTTGCAGGTCACTGCTTTaGCTGAGGGGAGTGACTGATGGAGGAGGCACACCTGACGTCGAC +
Preference number: 5 (lower is better)
Translates to: LANDDGTWLCCRSLL*LRGVTDGGGTPDVD
Trigger: GTCGACGTCAGGTGTGCCTCCTCCATCAGTCACTCCCCTCAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACCATCATCGTTAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 90 bp TCCAAGTCAGGCACCGTGGGAGTAGCACACTGCGAAGAACAGCTGTaGTGGTCGAAGTCACATTTGGCGTCTTGGCCCAAGTCGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SKSGTVGVAHCEEQL*WSKSHLASWPKSSK
Trigger: CTTTGACGACTTGGGCCAAGACGCCAAATGTGACTTCGACCATCACAGCTGTTCTTCGCAGTGTGCTACTCCCACGGTGCCTGACTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp GGAAGTCAATCACGATTGGCTAACGATGATGGTACCTGGCTCTGTTaGAGGTCACTGCTTTGCCTGAGGGGAGTGACTGATGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GSQSRLANDDGTWLC*RSLLCLRGVTDGGG
Trigger: GCCTCCTCCATCAGTCACTCCCCTCAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACCATCATCGTTAGCCAATCGTGATTGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGCGGCGTTGACCATCTaGGCCCCATCTTGCGACACG +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSAALTI*APSCDT
Trigger: CGTGTCGCAAGATGGGGCCAAGATGGTCAACGCCGC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 90 bp TGGAGCAAGGATGGGGAAGTCTGTCCTGAGGAGCAGGCATTGTCATaGATCCCATGCGGAAATGTTTGCCCACGTAACTTCCTTCGTGGC +
Preference number: 5 (lower is better)
Translates to: WSKDGEVCPEEQALS*IPCGNVCPRNFLRG
Trigger: GCCACGAAGGAAGTTACGTGGGCAAACATTTCCGCATGGGATTCATGACAATGCCTGCTCCTCAGGACAGACTTCCCCATCCTTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGTGCTGGGGTCCCTCTaGGGTTTGGGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSVLGSL*GLGGGC
Trigger: ACAACCACCACCCAAACCCAAGAGGGACCCCAGCAC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGATGAGGTGCTCAGCTaGGTGCTGGGGTCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSDEVLS*VLGSLL
Trigger: CAAGAGGGACCCCAGCACCAAGCTGAGCACCTCATC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCCATGGCACTGAGGCCTaGGCGAAGTCCAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSHGTEA*AKSKSG
Trigger: GCCTGACTTGGACTTCGCCAAGGCCTCAGTGCCATG...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGGGGACTCGTCGGAGTaGGGGGAGCAATGCACGGGG +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKGDSSE*GEQCTG
Trigger: CCCCGTGCATTGCTCCCCCAACTCCGACGAGTCCCC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGTGTTCACCGCGGCGTaGACCATCTTGGCCCCATCT +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSVFTAA*TILAPS
Trigger: AGATGGGGCCAAGATGGTCAACGCCGCGGTGAACAC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp CTTTCTTCTCTGTTTCTGCAATCCGTCTGCATTGAACGGCAAGGCTaGCAGCGTTCTAGCACCTTGGATAGTTCCTGCTCACTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: LSSLFLQSVCIERQG*QRSSTLDSSCSLGP
Trigger: TGGGCCTAGTGAGCAGGAACTATCCAAGGTGCTAGAACGCTGGCAGCCTTGCCGTTCAATGCAGACGGATTGCAGAAACAGAGAAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 90 bp AAGAAACCGGAAAGCGGCATCGTTCTACTTTGGATTTCGGCTCCCTaGGGGCTCCCATCCTCATTAAAGGCCTCACATCTAGGCAACAGA +
Preference number: 5 (lower is better)
Translates to: KKPESGIVLLWISAP*GLPSSLKASHLGNR
Trigger: TCTGTTGCCTAGATGTGAGGCCTTTAATGAGGATGGGAGCCCCCAGGGAGCCGAAATCCAAAGTAGAACGATGCCGCTTTCCGGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGGGGACTCGTCGGAGTaGGGGGAGCAATGCACGGGG +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPGDSSE*GEQCTG
Trigger: CCCCGTGCATTGCTCCCCCAACTCCGACGAGTCCCC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCCTGAAGGAGAGCTCCTaGAGAGGCTGCCCGAATGCA +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSLKESS*RGCPNA
Trigger: TGCATTCGGGCAGCCTCTCAAGGAGCTCTCCTTCAG...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTGCAATCCGTCTGCATaGAACGGCAAGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSCNPSA*NGKAAS
Trigger: GCTGGCAGCCTTGCCGTTCAATGCAGACGGATTGCA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 90 bp CGCTTCGGTTTGGGAGGAGGAATCTTCTTGGAATATTCATCGCTGTaGGGTCTTGGTTTAGCTGACGCTTCAGTCCTCTCAGGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: RFGLGGGIFLEYSSL*GLGLADASVLSGVF
Trigger: GAAAACCCCTGAGAGGACTGAAGCGTCAGCTAAACCAAGACCCCACAGCGATGAATATTCCAAGAAGATTCCTCCTCCCAAACCGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGTGCTGGGGTCCCTCTaGGGTTTGGGTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCVLGSL*GLGGGC
Trigger: ACAACCACCACCCAAACCCAAGAGGGACCCCAGCAC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGATGAGGTGCTCAGCTaGGTGCTGGGGTCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCDEVLS*VLGSLL
Trigger: CAAGAGGGACCCCAGCACCAAGCTGAGCACCTCATC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAACATCTTGGCCCCATCTaGCGACACGGGTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKHLGPI*RHGSGG
Trigger: ACCCCCAGACCCGTGTCGCAAGATGGGGCCAAGATG...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGTGTTCACCGCGGCGTaGACCATCTTGGCCCCATCT +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCVFTAA*TILAPS
Trigger: AGATGGGGCCAAGATGGTCAACGCCGCGGTGAACAC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCGGCCACTGGACGACTaGCGCAGCAGGCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFRPLDD*RSRLRP
Trigger: CGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATTCTCTGCAGGCTCTTaGGAGCGCCGGCCACTGGAC +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKFSAGS*ERRPLD
Trigger: GTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGAA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 90 bp CATGGTGGCCTCTTTCCTTGTTGTCCAACTTTGGTAATGGCTCCGTaGTGTGGCTTCGGACTTTCAGTTCCTCTGTTGATTTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: HGGLFPCCPTLVMAP*CGFGLSVPLLISLQ
Trigger: CTGCAGAGAAATCAACAGAGGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 90 bp TGGCCTCTTTCCTTGTTGTCCAACTTTGGTAATGGCTCCGTGCTGTaGCTTCGGACTTTCAGTTCCTCTGTTGATTTCTCTGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: WPLSLLSNFGNGSVL*LRTFSSSVDFSAGS
Trigger: AGAGCCTGCAGAGAAATCAACAGAGGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 90 bp TGTATCACAGGAAGTCAATCACGATTGGCTAACGATGATGGTACCTaGCTCTGTTGCAGGTCACTGCTTTGCCTGAGGGGAGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: CITGSQSRLANDDGT*LCCRSLLCLRGVTD
Trigger: ATCAGTCACTCCCCTCAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACCATCATCGTTAGCCAATCGTGATTGACTTCCTGTGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAACATGGCACTGAGGCCTaGGCGAAGTCCAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKHGTEA*AKSKSG
Trigger: GCCTGACTTGGACTTCGCCAAGGCCTCAGTGCCATG...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCTGAAGGAGAGCTCCTaGAGAGGCTGCCCGAATGCA +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCLKESS*RGCPNA
Trigger: TGCATTCGGGCAGCCTCTCAAGGAGCTCTCCTTCAG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCGGCATCGTTCTACTTaGGATTTCGGCTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCRHRST*DFGSLG
Trigger: CCCCAGGGAGCCGAAATCCAAAGTAGAACGATGCCG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS GCA 90 bp ATTGAACGGCAAGGCTGCCAGCGTTCTAGCACCTTGGATAGTTCCTaGTCACTAGGCCCATTGGAAAAGGGAGAAGCAACTGAAGAAATT +
Preference number: 5 (lower is better)
Translates to: IERQGCQRSSTLDSS*SLGPLEKGEATEEI
Trigger: AATTTCTTCAGTTGCTTCTCCCTTTTCCAATGGGCCTAGTGAGCAGGAACTATCCAAGGTGCTAGAACGCTGGCAGCCTTGCCGTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGGATTTCGCTTCGGTTaGGGAGGAGGAATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSGFRFG*GGGIFL
Trigger: CAAGAAGATTCCTCCTCCCAAACCGAAGCGAAATCC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGGTACCTGGCTCTGTaGCAGGTCACTGCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCWYLAL*QVTALP
Trigger: AGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACCA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 90 bp ACACACAGCCCCTCTCCTTCCAGGTCCAGCAGGGAAGAAATTGAATaGTTTTACCCACTTTGCTACACAGATGATTACAGGACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: THSPSPSRSSREEIE*FYPLCYTDDYRTRS
Trigger: GCTTCTGGTCCTGTAATCATCTGTGTAGCAAAGTGGGTAAAATCATTCAATTTCTTCCCTGCTGGACCTGGAAGGAGAGGGGCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 90 bp GTGGGAAGCATTTGGCAAGTTGTATCACAGGAAGTCAATCACGATTaGCTAACGATGATGGTACCTGGCTCTGTTGCAGGTCACTGCTTT +
Preference number: 5 (lower is better)
Translates to: VGSIWQVVSQEVNHD*LTMMVPGSVAGHCF
Trigger: AAAGCAGTGACCTGCAACAGAGCCAGGTACCATCATCGTTAGCCAATCGTGATTGACTTCCTGTGATACAACTTGCCAAATGCTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAAGCCCTCTCTCACGGTaGATCTCAGGGCAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKSPLSR*ISGQFC
Trigger: ACAGAACTGCCCTGAGATCAACCGTGAGAGAGGGCT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATGGTCGAAGTCACATTaGGCGTCTTGGCCCAAGTCG +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKWSKSH*ASWPKS
Trigger: CGACTTGGGCCAAGACGCCAAATGTGACTTCGACCA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTGGCCTCTTTCCTTGTaGTCCAACTTTGGTAATGGC +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSWPLSL*SNFGNG
Trigger: GCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 90 bp CGAAAGTTGTCTACAGCAACAGGACAGACAGAGGTGGGAAGCATTTaGCAAGTTGTATCACAGGAAGTCAATCACGATTGGCTAACGATG +
Preference number: 5 (lower is better)
Translates to: RKLSTATGQTEVGSI*QVVSQEVNHDWLTM
Trigger: CATCGTTAGCCAATCGTGATTGACTTCCTGTGATACAACTTGCCAAATGCTTCCCACCTCTGTCTGTCCTGTTGCTGTAGACAACTTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCATCTTGGCCCCATCTaGCGACACGGGTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFHLGPI*RHGSGG
Trigger: ACCCCCAGACCCGTGTCGCAAGATGGGGCCAAGATG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGCGGCGTTGACCATCTaGGCCCCATCTTGCGACACG +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFAALTI*APSCDT
Trigger: CGTGTCGCAAGATGGGGCCAAGATGGTCAACGCCGC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCCTTGTTGTCCAACTTaGGTAATGGCTCCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCPCCPT*VMAPCC
Trigger: ACAGCACGGAGCCATTACCAAAGTTGGACAACAAGG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCAAGCAAATGCGAAAGTaGTCTACAGCAACAGGACAG +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSKQMRK*STATGQ
Trigger: CTGTCCTGTTGCTGTAGACAACTTTCGCATTTGCTT...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCGCTTTCATTGAGAGTTaGAAGGGGCTTAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSAFIES*KGLRVK
Trigger: TTTCACCCTAAGCCCCTTCAAACTCTCAATGAAAGC...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTTCCCCATACTAATTCCCCATCCACAACCACGTACCCAAACGAACATCAGAGCTATTTGATATCAATTTaGCCTCCACCCTCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: FPHTNSPSTTTYPNEHQSYLISI*PPPSLH
Trigger: GTGCAGGGAGGGTGGAGGCAAAATTGATATCAAATA...GCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGGGGAATTAGTATGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCTGCTCACTAGGCCCATaGGAAAAGGGAGAAGCAACT +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCCSLGP*EKGEAT
Trigger: AGTTGCTTCTCCCTTTTCCAATGGGCCTAGTGAGCA...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCAGCGTTCTAGCACCTaGGATAGTTCCTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCQRSST*DSSCSL
Trigger: TAGTGAGCAGGAACTATCCAAGGTGCTAGAACGCTG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCACCTATGCGCTTTATaGCTTCTTCTTGTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCHLCAL*LLLVFG
Trigger: GCCGAAGACAAGAAGAAGCAATAAAGCGCATAGGTG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCGGAGGAGGAATCTTCTaGGAATATTCATCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCGGGIF*EYSSLW
Trigger: CCACAGCGATGAATATTCCAAGAAGATTCCTCCTCC...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCGGGGCCCATGCTTTTaGATGTACGTTTCATCGAAA +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCRGPCF*MYVSSK
Trigger: TTTCGATGAAACGTACATCAAAAAGCATGGGCCCCG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGGATTTCGCTTCGGTTaGGGAGGAGGAATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPGFRFG*GGGIFL
Trigger: CAAGAAGATTCCTCCTCCCAAACCGAAGCGAAATCC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGTCACATTTGGCGTCTaGGCCCAAGTCGTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPVTFGV*AQVVKD
Trigger: ATCTTTGACGACTTGGGCCAAGACGCCAAATGTGAC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCCTTGTTGTCCAACTTaGGTAATGGCTCCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPPCCPT*VMAPCC
Trigger: ACAGCACGGAGCCATTACCAAAGTTGGACAACAAGG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGCAGACCGGCCTAATTaGCAGCTTACTTTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPADRPN*QLTLGS
Trigger: AGAGCCTAAAGTAAGCTGCAAATTAGGCCGGTCTGC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGGAAGTCAATCACGATaGGCTAACGATGATGGTACC +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKGSQSR*ANDDGT
Trigger: GGTACCATCATCGTTAGCCAATCGTGATTGACTTCC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAAGAGGTGGGAAGCATTaGGCAAGTTGTATCACAGGA +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKRGGKH*ASCITG
Trigger: TCCTGTGATACAACTTGCCAAATGCTTCCCACCTCT...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCAAGCAACTGAAGAAATaGCAAGAAACCGGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCKQLKK*QETGKR
Trigger: CCGCTTTCCGGTTTCTTGCAATTTCTTCAGTTGCTT...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS TCA 90 bp AACAACTTAAATGGAACATCTAGATCTCAGTTTGATACCCTTATTTaGTATCAATTTTGCCTCCACCCTCCCTGCACAGCCGAGCCATGC +
Preference number: 5 (lower is better)
Translates to: NNLNGTSRSQFDTLI*YQFCLHPPCTAEPC
Trigger: GCATGGCTCGGCTGTGCAGGGAGGGTGGAGGCAAAATTGATATCAAATAAGGGTATCAAACTGAGATCTAGATGTTCCATTTAAGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 90 bp AAAAGCAAATGCGAAAGTTGTCTACAGCAACAGGACAGACAGAGGTaGGAAGCATTTGGCAAGTTGTATCACAGGAAGTCAATCACGATT +
Preference number: 5 (lower is better)
Translates to: KSKCESCLQQQDRQR*EAFGKLYHRKSITI
Trigger: AATCGTGATTGACTTCCTGTGATACAACTTGCCAAATGCTTCCCACCTCTGTCTGTCCTGTTGCTGTAGACAACTTTCGCATTTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 90 bp TCCTATCAGATAAAATGGCCTTTAAAGTTTGCTAGGAAGATGCAGTaGCGGAAGACAGGTGCTTGCTTCCTTAAATCGACATTCGGAGAA +
Preference number: 5 (lower is better)
Translates to: SYQIKWPLKFARKMQ*RKTGACFLKSTFGE
Trigger: TTCTCCGAATGTCGATTTAAGGAAGCAAGCACCTGTCTTCCGCCACTGCATCTTCCTAGCAAACTTTAAAGGCCATTTTATCTGATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 90 bp ATCACTAGATCAGAGCATTCTCGATGTCCTTCCTATCAGATAAAATaGCCTTTAAAGTTTGCTAGGAAGATGCAGTGGCGGAAGACAGGT +
Preference number: 5 (lower is better)
Translates to: ITRSEHSRCPSYQIK*PLKFARKMQWRKTG
Trigger: ACCTGTCTTCCGCCACTGCATCTTCCTAGCAAACTTTAAAGGCCATTTTATCTGATAGGAAGGACATCGAGAATGCTCTGATCTAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTAGCCCTCTCTCACGGTaGATCTCAGGGCAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFSPLSR*ISGQFC
Trigger: ACAGAACTGCCCTGAGATCAACCGTGAGAGAGGGCT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCGGGGCCCATGCTTTTaGATGTACGTTTCATCGAAA +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPRGPCF*MYVSSK
Trigger: TTTCGATGAAACGTACATCAAAAAGCATGGGCCCCG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTGGTCGAAGTCACATTaGGCGTCTTGGCCCAAGTCG +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFWSKSH*ASWPKS
Trigger: CGACTTGGGCCAAGACGCCAAATGTGACTTCGACCA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTGGCCTCTTTCCTTGTaGTCCAACTTTGGTAATGGC +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPWPLSL*SNFGNG
Trigger: GCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTTGGTACCTGGCTCTGTaGCAGGTCACTGCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFWYLAL*QVTALP
Trigger: AGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACCA...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAAGCTTTCATTGAGAGTTaGAAGGGGCTTAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKAFIES*KGLRVK
Trigger: TTTCACCCTAAGCCCCTTCAAACTCTCAATGAAAGC...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAACAGCCCATGTATGATTaGACTGTGTGTCAGAATCTC +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKQPMYD*TVCQNL
Trigger: GAGATTCTGACACACAGTCAAATCATACATGGGCTG...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCTTTCAGTTCCTCTGTaGATTTCTCTGCAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPLSVPL*ISLQAL
Trigger: AAGAGCCTGCAGAGAAATCAACAGAGGAACTGAAAG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAACTCCCTTGCTACATTTaGAAAAACGAAGAACTTCCC +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKLPCYI*KNEELP
Trigger: GGGAAGTTCTTCGTTTTTCAAAATGTAGCAAGGGAG...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCAGCCCATGTATGATTaGACTGTGTGTCAGAATCTC +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPQPMYD*TVCQNL
Trigger: GAGATTCTGACACACAGTCAAATCATACATGGGCTG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp AGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCAAGAACCTGCCTTTATTGCTTCTTCTaGTCTTCGGCGTTTTTCATT +
Preference number: 5 (lower is better)
Translates to: RHKGYTLSLFWKFIPRTCLYCFF*SSAFFI
Trigger: AATGAAAAACGCCGAAGACAAGAAGAAGCAATAAAG...GCAGGTTCTTGGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGCAGACCGGCCTAATTaGCAGCTTACTTTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFADRPN*QLTLGS
Trigger: AGAGCCTAAAGTAAGCTGCAAATTAGGCCGGTCTGC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAACACAAAGGGTATACCTaGTCTCTATTCTGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKHKGYT*SLFWKF
Trigger: AAACTTCCAGAATAGAGACAAGGTATACCCTTTGTG...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGGAGGAGGAATCTTCTaGGAATATTCATCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFGGGIF*EYSSLW
Trigger: CCACAGCGATGAATATTCCAAGAAGATTCCTCCTCC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGGAAGTCAATCACGATaGGCTAACGATGATGGTACC +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFGSQSR*ANDDGT
Trigger: GGTACCATCATCGTTAGCCAATCGTGATTGACTTCC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp CCATCCACAACCACGTACCCAAACGAACATCAGAGCAACATATTATGCTGTAAATGTATTGAATTCCTATaGGGTGAGCTAAAGATAGGA +
Preference number: 5 (lower is better)
Translates to: PSTTTYPNEHQSNILCCKCIEFL*GELKIG
Trigger: TCCTATCTTTAGCTCACCCAATAGGAATTCAATACA...TTTACAGCATAATATGTTGCTCTGATGTTCGTTTGGGTACGTGGTTGTGGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCGAAGCCTCTCATTTCTaGTATTTGCAGATACCTCAT +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPEASHF*YLQIPH
Trigger: ATGAGGTATCTGCAAATACAAGAAATGAGAGGCTTC...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCCTTTATTGCTTCTTCTaGTCTTCGGCGTTTTTCATT +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPLYCFF*SSAFFI
Trigger: AATGAAAAACGCCGAAGACAAGAAGAAGCAATAAAG...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCTTTCAGTTCCTCTGTaGATTTCTCTGCAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFLSVPL*ISLQAL
Trigger: AAGAGCCTGCAGAGAAATCAACAGAGGAACTGAAAG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTAAGCAAATGCGAAAGTaGTCTACAGCAACAGGACAG +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFKQMRK*STATGQ
Trigger: CTGTCCTGTTGCTGTAGACAACTTTCGCATTTGCTT...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp GATAATGCAAAGGCACAAAGGGTATACCTTGTCTCTATTCTGGAAGTTTATCCCTGTATTGAATTCCTATaGGGTGAGCTAAAGATAGGA +
Preference number: 5 (lower is better)
Translates to: DNAKAQRVYLVSILEVYPCIEFL*GELKIG
Trigger: TCCTATCTTTAGCTCACCCAATAGGAATTCAATACA...GGGATAAACTTCCAGAATAGAGACAAGGTATACCCTTTGTGCCTTTGCATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCTCCCTTGCTACATTTaGAAAAACGAAGAACTTCCC +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFLPCYI*KNEELP
Trigger: GGGAAGTTCTTCGTTTTTCAAAATGTAGCAAGGGAG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTGAAGCCTCTCATTTCTaGTATTTGCAGATACCTCAT +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFEASHF*YLQIPH
Trigger: ATGAGGTATCTGCAAATACAAGAAATGAGAGGCTTC...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS-3UTR CAA 90 bp TTGAGATCTCATTTACCATGCATGAACACTTACATTCCCTTTCTGAGAACATTTCACAAAGGGTATACCTaGTCTCTATTCTGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: LRSHLPCMNTYIPFLRTFHKGYT*SLFWKF
Trigger: AAACTTCCAGAATAGAGACAAGGTATACCCTTTGTG...AAATGTTCTCAGAAAGGGAATGTAAGTGTTCATGCATGGTAAATGAGATCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp GCCTGCTCTTTCTCCAGTTTCGCATGGCCGGGGACGTaGGACGGCAGCGTGGAGGGCGACGCCCCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: ACSFSSFAWPGT*DGSVEGDAPAG
Trigger: GCCAGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAAAGAGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp CCCAGGGCCGCGGCCTGCTCTTTCTCCAGTTTCGCATaGCCGGGGACGTGGGACGGCAGCGTGGAGGGCGAC +
Preference number: 6 (lower is better)
Translates to: PRAAACSFSSFA*PGTWDGSVEGD
Trigger: GTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAAAGAGCAGGCCGCGGCCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 72 bp GCTCGTGGGTGTCCGGGACCGGGAGCCACCCGGGGCTaGCCCGTAGGTGTTCACCGCGGCGTTGACCATCTT +
Preference number: 6 (lower is better)
Translates to: ARGCPGPGATRG*PVGVHRGVDHL
Trigger: AAGATGGTCAACGCCGCGGTGAACACCTACGGGGCAGCCCCGGGTGGCTCCCGGTCCCGGACACCCACGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp ACTTGCGCAGCAGGCTGCGGCCGGAGGAGAAGAGGCTaGTCAGCTCCTCCAGCGGGCTCGTGGGTGTCCGGG +
Preference number: 6 (lower is better)
Translates to: TCAAGCGRRRRG*SAPPAGSWVSG
Trigger: CCCGGACACCCACGAGCCCGCTGGAGGAGCTGACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 72 bp TGGAGCGCCGGCCACTGGACGACTTGCGCAGCAGGCTaGGGCCGGAGGAGAAGAGGCTGGTCAGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: WSAGHWTTCAAG*GRRRRGWSAPP
Trigger: TGGAGGAGCTGACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp CCAGTTTCGCATGGCCGGGGACGTGGGACGGCAGCGTaGAGGGCGACGCCCCGGCTGGCTGTTTCATGTAAG +
Preference number: 6 (lower is better)
Translates to: PVSHGRGRGTAA*RATPRLAVSCK
Trigger: CTTACATGAAACAGCCAGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 72 bp TCTGCAGGCTCTTTGGAGCGCCGGCCACTGGACGACTaGCGCAGCAGGCTGCGGCCGGAGGAGAAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SAGSLERRPLDD*RSRLRPEEKRL
Trigger: CAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp GACGTGGGACGGCAGCGTGGAGGGCGACGCCCCGGCTaGCTGTTTCATGTAAGACACGTTTTCCAGCACGGG +
Preference number: 6 (lower is better)
Translates to: DVGRQRGGRRPG*LFHVRHVFQHG
Trigger: CCCGTGCTGGAAAACGTGTCTTACATGAAACAGCCAGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 90 bp GTTGATTTCTCTGCAGGCTCTTTGGAGCGCCGGCCACTGGACGACTaGCGCAGCAGGCTGCGGCCGGAGGAGAAGAGGCTGGTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: VDFSAGSLERRPLDD*RSRLRPEEKRLVSS
Trigger: GGAGCTGACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGAAATCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 72 bp TTGGCCCCATCTTGCGACACGGGTCTGGGGGTCGAGTaGGGCACTGAAGGAGAGCTCCTTGAGAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LAPSCDTGLGVE*GTEGELLERLP
Trigger: GGGCAGCCTCTCAAGGAGCTCTCCTTCAGTGCCTCACTCGACCCCCAGACCCGTGTCGCAAGATGGGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp TTGATTTCTCTGCAGGCTCTTTGGAGCGCCGGCCACTaGACGACTTGCGCAGCAGGCTGCGGCCGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: LISLQALWSAGH*TTCAAGCGRRR
Trigger: TCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGAAATCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 72 bp TGGGTTTGGGTGGTGGTTGTCTCCGTGAGCCACAGCTaGTGTCATCGTCTGTGCCCCCAACCGAGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: WVWVVVVSVSHS*CHRLCPQPSAG
Trigger: CCCTGCACTCGGTTGGGGGCACAGACGATGACAGCAGCTGTGGCTCACGGAGACAACCACCACCCAAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 72 bp CAGGTGTCCCTGGTGTTCCATCCCATTCCTGAGCTTTaGCAGGCTCTCTGGAGGAAGACGCCCCATGGTGGC +
Preference number: 6 (lower is better)
Translates to: QVSLVFHPIPEL*QALWRKTPHGG
Trigger: GCCACCATGGGGCGTCTTCCTCCAGAGAGCCTGTCAAAGCTCAGGAATGGGATGGAACACCAGGGACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 72 bp GTTGTCTCCGTGAGCCACAGCTGCTGTCATCGTCTGTaGCCCCAACCGAGTGCAGGGACTGTGATCTCACAG +
Preference number: 6 (lower is better)
Translates to: VVSVSHSCCHRL*PQPSAGTVISQ
Trigger: CTGTGAGATCACAGTCCCTGCACTCGGTTGGGGGCACAGACGATGACAGCAGCTGTGGCTCACGGAGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 72 bp CAGGGGTTTTCCCGCTCTTACTGGCTGCAGTGCTGCTaGCTGTCTCTGATGAGGTGCTCAGCTTGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: QGFSRSYWLQCC*LSLMRCSAWCW
Trigger: CCAGCACCAAGCTGAGCACCTCATCAGAGACAGTCAGCAGCACTGCAGCCAGTAAGAGCGGGAAAACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 72 bp CCCGCGGCAGCGACGTCCTCCGGGGCCCATGCTTTTTaGTGTACGTTTCATCGAAAGATGTGCTCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: PAAATSSGAHAF*CTFHRKMCSAE
Trigger: CTCAGCTGAGCACATCTTTCGATGAAACGTACATCAAAAAGCATGGGCCCCGGAGGACGTCGCTGCCGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 72 bp GAGGAGTCCCGCGGCAGCGACGTCCTCCGGGGCCCATaGTTTTTGATGTACGTTTCATCGAAAGATGTGCTC +
Preference number: 6 (lower is better)
Translates to: EESRGSDVLRGP*FLMYVSSKDVL
Trigger: GAGCACATCTTTCGATGAAACGTACATCAAAAAGCATGGGCCCCGGAGGACGTCGCTGCCGCGGGACTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp CTTTCAGTTCCTCTGTTGATTTCTCTGCAGGCTCTTTaGAGCGCCGGCCACTGGACGACTTGCGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: LSVPLLISLQAL*SAGHWTTCAAG
Trigger: GCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGAAATCAACAGAGGAACTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 72 bp GGCACCGTGGGAGTAGCACACTGCGAAGAACAGCTGTaGTGGTCGAAGTCACATTTGGCGTCTTGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: GTVGVAHCEEQL*WSKSHLASWPK
Trigger: CTTGGGCCAAGACGCCAAATGTGACTTCGACCATCACAGCTGTTCTTCGCAGTGTGCTACTCCCACGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 72 bp ACTTTCAGTTCCTCTGTTGATTTCTCTGCAGGCTCTTaGGAGCGCCGGCCACTGGACGACTTGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: TFSSSVDFSAGS*ERRPLDDLRSR
Trigger: CCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCCTGCAGAGAAATCAACAGAGGAACTGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 90 bp ACAGGCTCTCTGGAGGAAGACGCCCCATGGTGGCCTCTTTCCTTGTaGTCCAACTTTGGTAATGGCTCCGTGCTGTGGCTTCGGACTTTC +
Preference number: 6 (lower is better)
Translates to: TGSLEEDAPWWPLSL*SNFGNGSVLWLRTF
Trigger: GAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCACCATGGGGCGTCTTCCTCCAGAGAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 90 bp TTGACAGGCTCTCTGGAGGAAGACGCCCCATGGTGGCCTCTTTCCTaGTTGTCCAACTTTGGTAATGGCTCCGTGCTGTGGCTTCGGACT +
Preference number: 6 (lower is better)
Translates to: LTGSLEEDAPWWPLS*LSNFGNGSVLWLRT
Trigger: AGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCACCATGGGGCGTCTTCCTCCAGAGAGCCTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 72 bp CTGGAGGAAGACGCCCCATGGTGGCCTCTTTCCTTGTaGTCCAACTTTGGTAATGGCTCCGTGCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: LEEDAPWWPLSL*SNFGNGSVLWL
Trigger: AAGCCACAGCACGGAGCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCACCATGGGGCGTCTTCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 72 bp GGAGGCACACCTGACGTCGACGCAGACCGGCCTAATTaGCAGCTTACTTTAGGCTCTGAACTGTGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: GGTPDVDADRPN*QLTLGSELWFP
Trigger: GGGAAACCACAGTTCAGAGCCTAAAGTAAGCTGCAAATTAGGCCGGTCTGCGTCGACGTCAGGTGTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 90 bp TGGAGGAAGACGCCCCATGGTGGCCTCTTTCCTTGTTGTCCAACTTaGGTAATGGCTCCGTGCTGTGGCTTCGGACTTTCAGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: WRKTPHGGLFPCCPT*VMAPCCGFGLSVPL
Trigger: CAGAGGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCACCATGGGGCGTCTTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp GCTTTGACAGGCTCTCTGGAGGAAGACGCCCCATGGTaGCCTCTTTCCTTGTTGTCCAACTTTGGTAATGGC +
Preference number: 6 (lower is better)
Translates to: ALTGSLEEDAPW*PLSLLSNFGNG
Trigger: GCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCACCATGGGGCGTCTTCCTCCAGAGAGCCTGTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 72 bp ACGCCCCATGGTGGCCTCTTTCCTTGTTGTCCAACTTaGGTAATGGCTCCGTGCTGTGGCTTCGGACTTTCA +
Preference number: 6 (lower is better)
Translates to: TPHGGLFPCCPT*VMAPCCGFGLS
Trigger: TGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAACAAGGAAAGAGGCCACCATGGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 90 bp CAATCCGTCTGCATTGAACGGCAAGGCTGCCAGCGTTCTAGCACCTaGGATAGTTCCTGCTCACTAGGCCCATTGGAAAAGGGAGAAGCA +
Preference number: 6 (lower is better)
Translates to: QSVCIERQGCQRSST*DSSCSLGPLEKGEA
Trigger: TGCTTCTCCCTTTTCCAATGGGCCTAGTGAGCAGGAACTATCCAAGGTGCTAGAACGCTGGCAGCCTTGCCGTTCAATGCAGACGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 72 bp GGAAGTCAATCACGATTGGCTAACGATGATGGTACCTaGCTCTGTTGCAGGTCACTGCTTTGCCTGAGGGGA +
Preference number: 6 (lower is better)
Translates to: GSQSRLANDDGT*LCCRSLLCLRG
Trigger: TCCCCTCAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACCATCATCGTTAGCCAATCGTGATTGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp GAAAGCGGCATCGTTCTACTTTGGATTTCGGCTCCCTaGGGGCTCCCATCCTCATTAAAGGCCTCACATCTA +
Preference number: 6 (lower is better)
Translates to: ESGIVLLWISAP*GLPSSLKASHL
Trigger: TAGATGTGAGGCCTTTAATGAGGATGGGAGCCCCCAGGGAGCCGAAATCCAAAGTAGAACGATGCCGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CAA 72 bp TGCATTGAACGGCAAGGCTGCCAGCGTTCTAGCACCTaGGATAGTTCCTGCTCACTAGGCCCATTGGAAAAG +
Preference number: 6 (lower is better)
Translates to: CIERQGCQRSST*DSSCSLGPLEK
Trigger: CTTTTCCAATGGGCCTAGTGAGCAGGAACTATCCAAGGTGCTAGAACGCTGGCAGCCTTGCCGTTCAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CAA 90 bp CAACTGAAGAAATTGCAAGAAACCGGAAAGCGGCATCGTTCTACTTaGGATTTCGGCTCCCTGGGGGCTCCCATCCTCATTAAAGGCCTC +
Preference number: 6 (lower is better)
Translates to: QLKKLQETGKRHRST*DFGSLGAPILIKGL
Trigger: GAGGCCTTTAATGAGGATGGGAGCCCCCAGGGAGCCGAAATCCAAAGTAGAACGATGCCGCTTTCCGGTTTCTTGCAATTTCTTCAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS TCA 72 bp GATGGGGAAGTCTGTCCTGAGGAGCAGGCATTGTCATaGATCCCATGCGGAAATGTTTGCCCACGTAACTTC +
Preference number: 6 (lower is better)
Translates to: DGEVCPEEQALS*IPCGNVCPRNF
Trigger: GAAGTTACGTGGGCAAACATTTCCGCATGGGATTCATGACAATGCCTGCTCCTCAGGACAGACTTCCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 72 bp AAGGTGACTTGTGTCTGTCAGAGCCCTCTCTCACGGTaGATCTCAGGGCAGTTCTGTAGGAGTAATCCAGCA +
Preference number: 6 (lower is better)
Translates to: KVTCVCQSPLSR*ISGQFCRSNPA
Trigger: TGCTGGATTACTCCTACAGAACTGCCCTGAGATCAACCGTGAGAGAGGGCTCTGACAGACACAAGTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 72 bp AGCAGTAATCTTTCTTCTCTGTTTCTGCAATCCGTCTaGATTGAACGGCAAGGCTGCCAGCGTTCTAGCACC +
Preference number: 6 (lower is better)
Translates to: SSNLSSLFLQSV*IERQGCQRSST
Trigger: GGTGCTAGAACGCTGGCAGCCTTGCCGTTCAATGCAGACGGATTGCAGAAACAGAGAAGAAAGATTACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CAA 72 bp GTAATCTTTCTTCTCTGTTTCTGCAATCCGTCTGCATaGAACGGCAAGGCTGCCAGCGTTCTAGCACCTTGG +
Preference number: 6 (lower is better)
Translates to: VIFLLCFCNPSA*NGKAASVLAPW
Trigger: CCAAGGTGCTAGAACGCTGGCAGCCTTGCCGTTCAATGCAGACGGATTGCAGAAACAGAGAAGAAAGATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CAA 90 bp ACACTGCGAAGAACAGCTGTGATGGTCGAAGTCACATTTGGCGTCTaGGCCCAAGTCGTCAAAGATAGGGTACTTCATTTCCTCGTAGAC +
Preference number: 6 (lower is better)
Translates to: TLRRTAVMVEVTFGV*AQVVKDRVLHFLVD
Trigger: GTCTACGAGGAAATGAAGTACCCTATCTTTGACGACTTGGGCCAAGACGCCAAATGTGACTTCGACCATCACAGCTGTTCTTCGCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 90 bp GGTGGGAAGCATTTGGCAAGTTGTATCACAGGAAGTCAATCACGATaGGCTAACGATGATGGTACCTGGCTCTGTTGCAGGTCACTGCTT +
Preference number: 6 (lower is better)
Translates to: GGKHLASCITGSQSR*ANDDGTWLCCRSLL
Trigger: AAGCAGTGACCTGCAACAGAGCCAGGTACCATCATCGTTAGCCAATCGTGATTGACTTCCTGTGATACAACTTGCCAAATGCTTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS GCA 72 bp TTTGCTAGGAAGATGCAGTGGCGGAAGACAGGTGCTTaGTTCCTTAAATCGACATTCGGAGAAAAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: FARKMQWRKTGA*FLKSTFGEKRA
Trigger: TGCCCTCTTTTCTCCGAATGTCGATTTAAGGAAGCAAGCACCTGTCTTCCGCCACTGCATCTTCCTAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 72 bp TTGGGAGGAGGAATCTTCTTGGAATATTCATCGCTGTaGGGTCTTGGTTTAGCTGACGCTTCAGTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: LGGGIFLEYSSL*GLGLADASVLS
Trigger: TGAGAGGACTGAAGCGTCAGCTAAACCAAGACCCCACAGCGATGAATATTCCAAGAAGATTCCTCCTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 90 bp TGCCAGCGTTCTAGCACCTTGGATAGTTCCTGCTCACTAGGCCCATaGGAAAAGGGAGAAGCAACTGAAGAAATTGCAAGAAACCGGAAA +
Preference number: 6 (lower is better)
Translates to: CQRSSTLDSSCSLGP*EKGEATEEIARNRK
Trigger: TTTCCGGTTTCTTGCAATTTCTTCAGTTGCTTCTCCCTTTTCCAATGGGCCTAGTGAGCAGGAACTATCCAAGGTGCTAGAACGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CAA 90 bp GATGAACACACAGCCCCTCTCCTTCCAGGTCCAGCAGGGAAGAAATaGAATGATTTTACCCACTTTGCTACACAGATGATTACAGGACCA +
Preference number: 6 (lower is better)
Translates to: DEHTAPLLPGPAGKK*NDFTHFATQMITGP
Trigger: TGGTCCTGTAATCATCTGTGTAGCAAAGTGGGTAAAATCATTCAATTTCTTCCCTGCTGGACCTGGAAGGAGAGGGGCTGTGTGTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 72 bp TCCTTGTTGTCCAACTTTGGTAATGGCTCCGTGCTGTaGCTTCGGACTTTCAGTTCCTCTGTTGATTTCTCT +
Preference number: 6 (lower is better)
Translates to: SLLSNFGNGSVL*LRTFSSSVDFS
Trigger: AGAGAAATCAACAGAGGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAACAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp TCTACAGCAACAGGACAGACAGAGGTGGGAAGCATTTaGCAAGTTGTATCACAGGAAGTCAATCACGATTGG +
Preference number: 6 (lower is better)
Translates to: STATGQTEVGSI*QVVSQEVNHDW
Trigger: CCAATCGTGATTGACTTCCTGTGATACAACTTGCCAAATGCTTCCCACCTCTGTCTGTCCTGTTGCTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 72 bp TTCGGATTTCGCTTCGGTTTGGGAGGAGGAATCTTCTaGGAATATTCATCGCTGTGGGGTCTTGGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: FGFRFGLGGGIF*EYSSLWGLGLA
Trigger: AGCTAAACCAAGACCCCACAGCGATGAATATTCCAAGAAGATTCCTCCTCCCAAACCGAAGCGAAATCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CAA 72 bp AGAACAGCTGTGATGGTCGAAGTCACATTTGGCGTCTaGGCCCAAGTCGTCAAAGATAGGGTACTTCATTTC +
Preference number: 6 (lower is better)
Translates to: RTAVMVEVTFGV*AQVVKDRVLHF
Trigger: GAAATGAAGTACCCTATCTTTGACGACTTGGGCCAAGACGCCAAATGTGACTTCGACCATCACAGCTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 72 bp TTTTTGATGTACGTTTCATCGAAAGATGTGCTCAGCTaGGTGTTCGGATTTCGCTTCGGTTTGGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: FLMYVSSKDVLS*VFGFRFGLGGG
Trigger: TCCTCCTCCCAAACCGAAGCGAAATCCGAACACTCAGCTGAGCACATCTTTCGATGAAACGTACATCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS TCA 72 bp CCCTCTCCTTCCAGGTCCAGCAGGGAAGAAATTGAATaGTTTTACCCACTTTGCTACACAGATGATTACAGG +
Preference number: 6 (lower is better)
Translates to: PSPSRSSREEIE*FYPLCYTDDYR
Trigger: CCTGTAATCATCTGTGTAGCAAAGTGGGTAAAATCATTCAATTTCTTCCCTGCTGGACCTGGAAGGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 72 bp ATTTGGCAAGTTGTATCACAGGAAGTCAATCACGATTaGCTAACGATGATGGTACCTGGCTCTGTTGCAGGT +
Preference number: 6 (lower is better)
Translates to: IWQVVSQEVNHD*LTMMVPGSVAG
Trigger: ACCTGCAACAGAGCCAGGTACCATCATCGTTAGCCAATCGTGATTGACTTCCTGTGATACAACTTGCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272907.7
ENST00000636099.1
CDS CCA 72 bp TCAGAGCATTCTCGATGTCCTTCCTATCAGATAAAATaGCCTTTAAAGTTTGCTAGGAAGATGCAGTGGCGG +
Preference number: 6 (lower is better)
Translates to: SEHSRCPSYQIK*PLKFARKMQWR
Trigger: CCGCCACTGCATCTTCCTAGCAAACTTTAAAGGCCATTTTATCTGATAGGAAGGACATCGAGAATGCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 72 bp ATAAAATGGCCTTTAAAGTTTGCTAGGAAGATGCAGTaGCGGAAGACAGGTGCTTGCTTCCTTAAATCGACA +
Preference number: 6 (lower is better)
Translates to: IKWPLKFARKMQ*RKTGACFLKST
Trigger: TGTCGATTTAAGGAAGCAAGCACCTGTCTTCCGCCACTGCATCTTCCTAGCAAACTTTAAAGGCCATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 72 bp CAGCTCAGTGTTTCTTCAATTAAAGTGCATTGTGTCTaGATGGGAAAAGTGTCGACTCCCAGATTCTTCATC +
Preference number: 6 (lower is better)
Translates to: QLSVSSIKVHCV*MGKVSTPRFFI
Trigger: GATGAAGAATCTGGGAGTCGACACTTTTCCCATCCAGACACAATGCACTTTAATTGAAGAAACACTGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1
CDS CCA 72 bp TCAGTGTTTCTTCAATTAAAGTGCATTGTGTCTGGATaGGAAAAGTGTCGACTCCCAGATTCTTCATCACTA +
Preference number: 6 (lower is better)
Translates to: SVFLQLKCIVSG*EKCRLPDSSSL
Trigger: TAGTGATGAAGAATCTGGGAGTCGACACTTTTCCCATCCAGACACAATGCACTTTAATTGAAGAAACACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636099.1