RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NYAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166924

Ensembl transcript IDs: ENST00000300179.7, ENST00000454988.1, ENST00000489641.1, ENST00000496985.1

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCTGTGGGGTGGCATGGACGGCGGGGCCTTTAGGCATTGGCATTaGGGAGAGTGCAAACTTGGCCCTGATTCTCCACTCCTAGCTCAG +
Preference number: 1 (lower is better)
Translates to: WLWGGMDGGAFRHWH*GECKLGPDSPLLAQ
Trigger: CTGAGCTAGGAGTGGAGAATCAGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCATGCCACCCCACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
3UTR GCA 90 bp CAAATTCTGGCAAATTGTAAATACTGTGAATGGTCTTGGGCCCTCTaGTTCCCTGGGCCCCTTCTTCTCTCGGTCCACTCCCCATGCAGA +
Preference number: 1 (lower is better)
Translates to: QILANCKYCEWSWAL*FPGPLLLSVHSPCR
Trigger: TCTGCATGGGGAGTGGACCGAGAGAAGAAGGGGCCCAGGGAAGCAGAGGGCCCAAGACCATTCACAGTATTTACAATTTGCCAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
3UTR CCA 90 bp ACTGACTACCAAATTCTGGCAAATTGTAAATACTGTGAATGGTCTTaGGCCCTCTGCTTCCCTGGGCCCCTTCTTCTCTCGGTCCACTCC +
Preference number: 1 (lower is better)
Translates to: TDYQILANCKYCEWS*ALCFPGPLLLSVHS
Trigger: GGAGTGGACCGAGAGAAGAAGGGGCCCAGGGAAGCAGAGGGCCCAAGACCATTCACAGTATTTACAATTTGCCAGAATTTGGTAGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
3UTR CCA 90 bp AATAAGATGCCTGATTCAGAGCAGGCCACACTGACTACCAAATTCTaGCAAATTGTAAATACTGTGAATGGTCTTGGGCCCTCTGCTTCC +
Preference number: 1 (lower is better)
Translates to: NKMPDSEQATLTTKF*QIVNTVNGLGPSAS
Trigger: GGAAGCAGAGGGCCCAAGACCATTCACAGTATTTACAATTTGCCAGAATTTGGTAGTCAGTGTGGCCTGCTCTGAATCAGGCATCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300179.7
3UTR-3UTR CCA 90 bp GGTGGCATGGACGGCGGGGCCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTTCTCAGCAGCGCTGTTaGCATCCTAAGCCCAATGGG +
Preference number: 2 (lower is better)
Translates to: GGMDGGAFRHWHWGECKLSQQRC*HPKPNG
Trigger: CCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGA...AAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCATGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
3UTR-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCTCAGCAGCGCTGTTaGCATCCTAAGCCCAATGGG +
Preference number: 2 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLSQQRC*HPKPNG
Trigger: CCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGA...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
3UTR CCA 72 bp GGTGGCATGGACGGCGGGGCCTTTAGGCATTGGCATTaGGGAGAGTGCAAACTTGGCCCTGATTCTCCACTC +
Preference number: 3 (lower is better)
Translates to: GGMDGGAFRHWH*GECKLGPDSPL
Trigger: GAGTGGAGAATCAGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCATGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
3UTR CCA 72 bp CCAACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTaGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCC +
Preference number: 3 (lower is better)
Translates to: PTPGSLEKSSSI*HSSPSLSAHPP
Trigger: GGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp TCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGCCCCCTCCTGCTGCTGTCCTCTGTaGGGCCCCCACTGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SMSLKARLPGEPGVPAPSCCCPL*GPHWPR
Trigger: GCGGGGCCAGTGGGGGCCTCACAGAGGACAGCAGCA...GGAGGGGGCGGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGCCCCCTCCGCCAGGCAGCCGCGGTaGTGGAGGACCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SMSLKARLPGEPGVPAPSARQPR*WRTPAA
Trigger: AGCAGCTGGGGTCCTCCACCACCGCGGCTGCCTGGC...GGAGGGGGCGGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGCCCCCTCCGTGTGGAGCACGACCTaGCGGACTCCGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SMSLKARLPGEPGVPAPSVWSTT*RTPEVE
Trigger: CTCCACCTCCGGAGTCCGGCAGGTCGTGCTCCACAC...GGAGGGGGCGGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGCCCCCTCCTGGGGTGGAGCCGGCTaGCTCCTTGGAGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SMSLKARLPGEPGVPAPSWGGAG*LLGVAE
Trigger: CTCTGCCACTCCAAGGAGCCAGCCGGCTCCACCCCA...GGAGGGGGCGGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCGAGGACCCCAGCTGCTaGGCCCATGGCCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: RPAGRTARATLAPTSSKPEDPSC*AHGPTV
Trigger: CACGGTGGGGCCATGGGCGCAGCAGCTGGGGTCCTC...GGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGCAGAGGACCGTGTGCTaGCGGCGGCAGGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: AWFRRRGVQRPAGRTARAQRTVC*RRQGGV
Trigger: CACCCCGCCCTGCCGCCGGCAGCACACGGTCCTCTG...CGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGCCCCCTCCCAGGGGTGGACCAGCTaGCAGGACAGAGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SMSLKARLPGEPGVPAPSQGWTS*QDRVRG
Trigger: ACCACGCACTCTGTCCTGCCAGCTGGTCCACCCCTG...GGAGGGGGCGGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCCATGCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGCCCATGGCCCCACCGTaGGGGCTGGTCTTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PMLTSGLVQEEGCTTPSGPMAPP*GLVFPG
Trigger: GCCAGGGAAGACCAGCCCCCACGGTGGGGCCATGGG...CCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCAGGCAGCCGCGGTGGTaGAGGACCCCAGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RPAGRTARATLAPTSSKPRQPRW*RTPAAA
Trigger: CGCAGCAGCTGGGGTCCTCCACCACCGCGGCTGCCT...GGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGCCCCCTCCCCCCTGGCTTCTCACTaGGATCCCCGATGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SMSLKARLPGEPGVPAPSPLASH*DPRCPR
Trigger: CCTGGGACATCGGGGATCCCAGTGAGAAGCCAGGGG...GGAGGGGGCGGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCCTGCAGGGCCCAGCCTaGCCCAAATGTCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: RSLSMSLKARLPGEPGVPLQGPA*PKCRGA
Trigger: GGCGCCGCGACATTTGGGGCAGGCTGGGCCCTGCAG...GGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTTCCCAGAGGACCGTGTaGTGCCGGCGGCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: REEQPERLSPQPQANPPPSQRTV*CRRQGG
Trigger: CCCGCCCTGCCGCCGGCAGCACACGGTCCTCTGGGA...AGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCGAAGCTGGGCGGCGGTaGGCATGGGGCGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSEAGRR*AWGGRA
Trigger: CGCCCTTCCGCCCCATGCCCACCGCCGCCCAGCTTC...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCCCGGGCCCGGCCCGATaGTCCCAGCAGCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RSLSMSLKARLPGEPGVPPGPAR*SQQQQV
Trigger: AACCTGCTGCTGCTGGGACCATCGGGCCGGGCCCGG...GGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCCATGCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGCAGGCGGGGAAGGTCTaGCAGGGAATGGGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PMLTSGLVQEEGCTTPSGQAGKV*QGMGSA
Trigger: CGCGCTGCCCATTCCCTGCCAGACCTTCCCCGCCTG...CCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCCGAGGGCATCCCTGGGCTaGCTGCAGGGCCGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: EQPERLSPQPQANPPPPPRASLG*LQGRGV
Trigger: CACACCCCGGCCCTGCAGCCAGCCCAGGGATGCCCT...CGGAGGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCGGCTGTGGGGTGGCATaGACGGCGGGGCCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: RPAGRTARATLAPTSSKPGCGVA*TAGPLG
Trigger: GCCTAAAGGCCCCGCCGTCCATGCCACCCCACAGCC...GGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR TCA 90 bp CGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGGCGGTGGCGCGCCTTaGTCTCCTTGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: RSLSMSLKARLPGEPGVPGGGAP*SPCTRS
Trigger: GCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCC...GGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTGAGGACCCCAGCTGCTaGGCCCATGGCCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: VQEEGCTTPSGKNSQSDSEDPSC*AHGPTV
Trigger: CACGGTGGGGCCATGGGCGCAGCAGCTGGGGTCCTC...AGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGCTGGACCCTCGGCACTaGCATTCCAGGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: AWFRRRGVQRPAGRTARALDPRH*HSRPGH
Trigger: GTGCCCGGGCCTGGAATGGCAGTGCCGAGGGTCCAG...CGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCATGCTGCCCACCGAGTaGCAGGAGAGGGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: RPAGRTARATLAPTSSKPMLPTE*QERERG
Trigger: CCCACGCTCCCTCTCCTGCCACTCGGTGGGCAGCAT...GGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCAGGCAGCCGCGGTGGTaGAGGACCCCAGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSRQPRW*RTPAAA
Trigger: CGCAGCAGCTGGGGTCCTCCACCACCGCGGCTGCCT...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCCATGCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGCCCAGCTGCTGTGGCTaGGTAGGTCCACAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PMLTSGLVQEEGCTTPSGPSCCG*VGPQRG
Trigger: ACCCCGCTGTGGACCTACCCAGCCACAGCAGCTGGG...CCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGGGCATCCCTGGGCTaGCTGCAGGGCCGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNRASLG*LQGRGV
Trigger: CACACCCCGGCCCTGCAGCCAGCCCAGGGATGCCCT...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAAGCGCGGGGTGGGGCTaGCTCAGGGCATCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGSAGWG*LRASLG
Trigger: GCCCAGGGATGCCCTGAGCCAGCCCCACCCCGCGCT...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGGTCCCCGCCGCCAGCTaGGGAGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: AWFRRRGVQRPAGRTARAVPAAS*GGWACS
Trigger: AGAGCATGCCCATCCTCCCCAGCTGGCGGCGGGGAC...CGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp GCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGTCCCTGCGCTGGCGATaGCGTGGGCACAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: AWFRRRGVQRPAGRTARASLRWR*RGHRRC
Trigger: GCATCTCCTGTGCCCACGTCATCGCCAGCGCAGGGA...CGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp TGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGGGCGGTGGCGCGCCTTaGTCTCCTTGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: WLGSGGGVYNAQREEQPEGGGAP*SPCTRS
Trigger: GCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCC...CTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CCCATGCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGCTTCGCCTGGGCTTCTaGGGAGGAACCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PMLTSGLVQEEGCTTPSGLRLGF*GGTFRL
Trigger: CAGCCGGAAGGTTCCTCCGCAGAAGCCCAGGCGAAG...CCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCCGTCTCCCGCTCCCGTaGAGGCACTTGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLRLPLP*RHLGSW
Trigger: CCAGCTCCCCAAGTGCCTGCACGGGAGCGGGAGACG...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGTGGAGGACCCCAGCTaGTGCGCCCATGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGVEDPS*CAHGPT
Trigger: GGTGGGGCCATGGGCGCAGCAGCTGGGGTCCTCCAC...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCCTGGACCCTCGGCACTaGCATTCCAGGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSLDPRH*HSRPGH
Trigger: GTGCCCGGGCCTGGAATGGCAGTGCCGAGGGTCCAG...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCCCTCACGCTCCACCTTaGCTGGACCCTCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RSLSMSLKARLPGEPGVPPHAPP*LDPRHC
Trigger: GCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGG...GGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCCGGCATGCTCTCCTGCTTaGAGAGGCCTCGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: EQPERLSPQPQANPPPPPACSPA*RGLGPG
Trigger: GCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCATGC...CGGAGGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp ACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCATCCCAGAGGACCGTGTaGTGCCGGCGGCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TLPRSLSMSLKARLPGEPSQRTV*CRRQGG
Trigger: CCCGCCCTGCCGCCGGCAGCACACGGTCCTCTGGGA...TGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ATGGACGGCGGGGCCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTGCAGGAGAGGGAGCGTaGGGCCATGGCGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: MDGGAFRHWHWGECKLGPAGEGA*GHGAAA
Trigger: TGCCGCAGCGCCATGGCCCCACGCTCCCTCTCCTGC...AGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGGTGTCTCCGGGGCTTaGCAGGGGGTCTTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLGVSGA*QGVFGC
Trigger: GCACCCGAAGACCCCCTGCCAAGCCCCGGAGACACC...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTGGTGTCTCCGGGGCTTaGCAGGGGGTCTTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: REEQPERLSPQPQANPPPGVSGA*QGVFGC
Trigger: GCACCCGAAGACCCCCTGCCAAGCCCCGGAGACACC...AGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCCGATGGTGGAGGGCCATTaGCCCGGCCTTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: EQPERLSPQPQANPPPPPMVEGH*PGLPQP
Trigger: AGGCTGGGGAAGGCCGGGCCAATGGCCCTCCACCAT...CGGAGGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCTTGGGGAGCTGGGGTaGAGCCGGCTGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: REEQPERLSPQPQANPPPLGELG*SRLAPW
Trigger: CCAAGGAGCCAGCCGGCTCCACCCCAGCTCCCCAAG...AGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACTTGGGGAGCTGGGGTaGAGCCGGCTGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QRPAGRTARATLAPTSSKLGELG*SRLAPW
Trigger: CCAAGGAGCCAGCCGGCTCCACCCCAGCTCCCCAAG...TTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCCCGGGCCCGGCCCGATaGTCCCAGCAGCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLPGPAR*SQQQQV
Trigger: AACCTGCTGCTGCTGGGACCATCGGGCCGGGCCCGG...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCGCCAGAGCCCTGGGGTaGCAACGGTGTCGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSGKNSQSDSRPNLKQTLARALG*QRCRVA
Trigger: AGCCACTCGACACCGTTGCCACCCCAGGGCTCTGGC...GAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGGGCTGGCCAGAGCCCTaGGGTGGCAACGGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: SHVVFQCLSRRGSRESQAGWPEP*GGNGVE
Trigger: CTCGACACCGTTGCCACCCCAGGGCTCTGGCCAGCC...CGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCAGGTCTGGCAGGGAATaGGCAGCGCGGTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LPRSLSMSLKARLPGEPGRSGRE*AARCGS
Trigger: GGAGCCGCACCGCGCTGCCCATTCCCTGCCAGACCT...GCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCCAGGCGGGGAAGGTCTaGCAGGGAATGGGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: LPRSLSMSLKARLPGEPGQAGKV*QGMGSA
Trigger: CGCGCTGCCCATTCCCTGCCAGACCTTCCCCGCCTG...GCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCAGGGCCGGGGTGTGTaGAGCACGACCTGCCGGACT +
Preference number: 4 (lower is better)
Translates to: REEQPERLSPQPQANPPPQGRGV*STTCRT
Trigger: AGTCCGGCAGGTCGTGCTCCACACACCCCGGCCCTG...AGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACCCTCGGTCCGGGCGGTaGCGCGCCTTGATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNPRSGR*RALISL
Trigger: CAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGG...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACCTCGGTCCGGGCGGTaGCGCGCCTTGATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREEPRSGR*RALISL
Trigger: CAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGG...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGGTCCCCGCCGCCAGCTaGGGAGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SHVVFQCLSRRGSRESQAVPAAS*GGWACS
Trigger: AGAGCATGCCCATCCTCCCCAGCTGGCGGCGGGGAC...CGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCCCGCCCGCCTCAGATaGCGGTGTCCCAGAGGACCG +
Preference number: 4 (lower is better)
Translates to: ALSHVVFQCLSRRGSRESPARLR*RCPRGP
Trigger: CGGTCCTCTGGGACACCGCCATCTGAGGCGGGCGGG...GCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCACCCCTCCTTGGCTGTaGGGTGGCATGGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSTPPWL*GGMDGG
Trigger: CCCGCCGTCCATGCCACCCCACAGCCAAGGAGGGGT...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR TCA 90 bp ACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCATGCTGCTGTCCTCTGTaGGGCCCCCACTGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TLPRSLSMSLKARLPGEPCCCPL*GPHWPR
Trigger: GCGGGGCCAGTGGGGGCCTCACAGAGGACAGCAGCA...TGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp CTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCCCTGCAGCTGGATCTTaGCCATGGGGGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPRSLSMSLKARLPGEPGPAAGS*PWGMGP
Trigger: GGGCCCCATCCCCCATGGTCAAGATCCAGCTGCAGG...GCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAATCCCTGCGCTGGCGATaGCGTGGGCACAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREESLRWR*RGHRRC
Trigger: GCATCTCCTGTGCCCACGTCATCGCCAGCGCAGGGA...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCCTTCGCCTGGGCTTCTaGGGAGGAACCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RSLSMSLKARLPGEPGVPLRLGF*GGTFRL
Trigger: CAGCCGGAAGGTTCCTCCGCAGAAGCCCAGGCGAAG...GGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGACGTCTCCCGCTCCCGTaGAGGCACTTGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGRLPLP*RHLGSW
Trigger: CCAGCTCCCCAAGTGCCTGCACGGGAGCGGGAGACG...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACCTCCTCTGGTGTCCCTaGGCTGGCGATGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNLLWCP*AGDDVG
Trigger: GCCCACGTCATCGCCAGCGCAGGGACACCAGAGGAG...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACTCCTCTGGTGTCCCTaGGCTGGCGATGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: QRPAGRTARATLAPTSSKLLWCP*AGDDVG
Trigger: GCCCACGTCATCGCCAGCGCAGGGACACCAGAGGAG...TTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCCCTCACGCTCCACCTTaGCTGGACCCTCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSPHAPP*LDPRHC
Trigger: GCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGG...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAAGCATGCTCTCCTGCTTaGAGAGGCCTCGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREEACSPA*RGLGPG
Trigger: GCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCATGC...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp AAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCCCAGAGGACCGTGTGCTaGCGGCGGCAGGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: KRAPPSGTLVPLFQLTHPQRTVC*RRQGGV
Trigger: CACCCCGCCCTGCCGCCGGCAGCACACGGTCCTCTG...GGGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTGCGGGGTGTGCTCCTaGGAGGCGGGCATCGTCATG +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSCGVCS*EAGIVM
Trigger: CATGACGATGCCCGCCTCCCAGGAGCACACCCCGCA...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACTGCGGGGTGTGCTCCTaGGAGGCGGGCATCGTCATG +
Preference number: 4 (lower is better)
Translates to: NAQREEQPERLSPQPQANCGVCS*EAGIVM
Trigger: CATGACGATGCCCGCCTCCCAGGAGCACACCCCGCA...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAAGAGGAACCTTCCGGCTaGACTCTCGGCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QRPAGRTARATLAPTSSKEEPSG*TLGPLG
Trigger: CCCCAGAGGGCCGAGAGTCCAGCCGGAAGGTTCCTC...TTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCTCGAGGAGAGGGGCCTaGGGGGCAGGACTCATCGAA +
Preference number: 4 (lower is better)
Translates to: PSGKNSQSDSRPNLKQTLSRRGA*GAGLIE
Trigger: TTCGATGAGTCCTGCCCCCCAGGCCCCTCTCCTCGA...GAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACGCCAGAGCCCTGGGGTaGCAACGGTGTCGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNARALG*QRCRVA
Trigger: AGCCACTCGACACCGTTGCCACCCCAGGGCTCTGGC...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGGGGGCCTACAGTTaGGTCCGGAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREEQGAYS*VRKAVG
Trigger: CCCCACAGCCTTCCGGACCCAACTGTAGGCCCCCTG...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCCAGGGGGCCTACAGTTaGGTCCGGAAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLQGAYS*VRKAVG
Trigger: CCCCACAGCCTTCCGGACCCAACTGTAGGCCCCCTG...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCCGGCGCTGGCGATGACGTaGGCACAGGAGATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EQPERLSPQPQANPPPPPALAMT*AQEMLA
Trigger: TGCCAGCATCTCCTGTGCCCACGTCATCGCCAGCGC...CGGAGGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCAGCGCGGGGTGGGGCTaGCTCAGGGCATCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EKSSSIWHSSPSLSAHPPSAGWG*LRASLG
Trigger: GCCCAGGGATGCCCTGAGCCAGCCCCACCCCGCGCT...GGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCACCCGCCCGCCTCAGATaGCGGTGTCCCAGAGGACCG +
Preference number: 4 (lower is better)
Translates to: TLPRSLSMSLKARLPGEPPARLR*RCPRGP
Trigger: CGGTCCTCTGGGACACCGCCATCTGAGGCGGGCGGG...TGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAAGGCAGGGGGTCTCTTaGGCCCAGCTGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGRQGVS*AQLLWL
Trigger: CAGCCACAGCAGCTGGGCTCAAGAGACCCCCTGCCT...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTCCTGCAGCTGGATCTTaGCCATGGGGGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPPAAGS*PWGMGP
Trigger: GGGCCCCATCCCCCATGGTCAAGATCCAGCTGCAGG...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp ATGGACGGCGGGGCCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTCCCCGACACTGTCCATaGTGCCCACCGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: MDGGAFRHWHWGECKLGPPRHCP*CPPSGR
Trigger: CCTGCCACTCGGTGGGCAGCATGGACAGTGTCGGGG...AGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp GCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGTTGTGGCGGGGATGTTaGCGTCAATGGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AWFRRRGVQRPAGRTARALWRGC*RQWWRA
Trigger: GGCCCTCCACCATTGACGGCAACATCCCCGCCACAA...CGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGTGTGGAGCACGACCTaGCGGACTCCGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGVWSTT*RTPEVE
Trigger: CTCCACCTCCGGAGTCCGGCAGGTCGTGCTCCACAC...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCCTCCCCCATCATCCTaGCCATCCCTGGCACTAGAC +
Preference number: 4 (lower is better)
Translates to: PSGKNSQSDSRPNLKQTLPPPSS*PSLALD
Trigger: GTCTAGTGCCAGGGATGGGCAGGATGATGGGGGAGG...GAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAAAGCCTGCTTTCTTGCTaGGGGGCGTCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREESLLSC*GASLPQ
Trigger: CTGGGGCAGAGACGCCCCCCAGCAAGAAAGCAGGCT...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCGAGGAGAGGGGCCTaGGGGGCAGGACTCATCGAA +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSSRRGA*GAGLIE
Trigger: TTCGATGAGTCCTGCCCCCCAGGCCCCTCTCCTCGA...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTGATTCTCCACTCCGAAGCTGGGCGGCGGTaGGCATGGGGCGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: PLGIGIGESANLALILHSEAGRR*AWGGRA
Trigger: CGCCCTTCCGCCCCATGCCCACCGCCGCCCAGCTTC...GGAGTGGAGAATCAGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp GGTGGCATGGACGGCGGGGCCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTAAGGAGTGGTCTTGGTaGGCGTCCCGTCCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GGMDGGAFRHWHWGECKLKEWSW*ASRPSG
Trigger: GCCGGAGGGACGGGACGCCCACCAAGACCACTCCTT...AAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCATGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCCACAAGGAGTGGTCTTaGTGGGCGTCCCGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLHKEWS*WASRPS
Trigger: GGAGGGACGGGACGCCCACCAAGACCACTCCTTGTG...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCAGGGGTGGACCAGCTaGCAGGACAGAGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: NAQREEQPERLSPQPQANQGWTS*QDRVRG
Trigger: ACCACGCACTCTGTCCTGCCAGCTGGTCCACCCCTG...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTCAGCTGCTGCGCCCATaGCCCCACCGTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLQLLRP*PHRGGW
Trigger: CCAGCCCCCACGGTGGGGCCATGGGCGCAGCAGCTG...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp AAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCCGCCAGGCAGCCGCGGTaGTGGAGGACCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRAPPSGTLVPLFQLTHPARQPR*WRTPAA
Trigger: AGCAGCTGGGGTCCTCCACCACCGCGGCTGCCTGGC...GGGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCCCCAGCTGCTGTGGCTaGGTAGGTCCACAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLPSCCG*VGPQRG
Trigger: ACCCCGCTGTGGACCTACCCAGCCACAGCAGCTGGG...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAAGCGCTGGCGATGACGTaGGCACAGGAGATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREEALAMT*AQEMLA
Trigger: TGCCAGCATCTCCTGTGCCCACGTCATCGCCAGCGC...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCGGTCTCCATGGTaGATCCTGGCCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: REEQPERLSPQPQANPPPPRSPW*ILASSP
Trigger: GGGACTGCTGGCCAGGATCCACCATGGAGACCGAGG...AGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCCCTCGGTCTCCATGGTaGATCCTGGCCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSPRSPW*ILASSP
Trigger: GGGACTGCTGGCCAGGATCCACCATGGAGACCGAGG...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGCCCCCTCCAAGAGCTCCTCCATCTaGCACTCTAGTCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SMSLKARLPGEPGVPAPSKSSSI*HSSPSL
Trigger: AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTT...GGAGGGGGCGGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTTCCTTGGCTGTGGGGTaGCATGGACGGCGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPSLAVG*HGRRGL
Trigger: AAGGCCCCGCCGTCCATGCCACCCCACAGCCAAGGA...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR TCA 90 bp GAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCCGTGGGGTTGGCTTCTGTaGGCCTGCTTTCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: EQPERLSPQPQANPPPPPWGWLL*ACFLAG
Trigger: CCCAGCAAGAAAGCAGGCTCACAGAAGCCAACCCCA...CGGAGGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp AAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCCTGGGGCGGAAGGGCGTaGGGCTGTTGTGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: KRAPPSGTLVPLFQLTHPWGGRA*GCCGGD
Trigger: ATCCCCGCCACAACAGCCTCACGCCCTTCCGCCCCA...GGGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGATGGCACAGGGGGCCTTaGGCTGGTACACAGCATCCC +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGWHRGP*AGTQHP
Trigger: GGGATGCTGTGTACCAGCTCAAGGCCCCCTGTGCCA...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACACTGTCCATGCTaGCCACCGAGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WLGSGGGVYNAQREEQPERHCPC*PPSGRR
Trigger: TCTCCTGCCACTCGGTGGGCAGCATGGACAGTGTCG...CTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTGATTCTCCACTCCGTGGAGGACCCCAGCTaGTGCGCCCATGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PLGIGIGESANLALILHSVEDPS*CAHGPT
Trigger: GGTGGGGCCATGGGCGCAGCAGCTGGGGTCCTCCAC...GGAGTGGAGAATCAGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp CTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCCCCCCATCGGTCCCTTaGTCCTGCAGCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: LPRSLSMSLKARLPGEPGPPSVP*SCSWIL
Trigger: CAAGATCCAGCTGCAGGAGCAAGGGACCGATGGGGG...GCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCCCCCATCGGTCCCTTaGTCCTGCAGCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: VQEEGCTTPSGKNSQSDSPPSVP*SCSWIL
Trigger: CAAGATCCAGCTGCAGGAGCAAGGGACCGATGGGGG...AGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp CCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTGATTCTCCACTCCCTGCAGGGCCCAGCCTaGCCCAAATGTCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: PLGIGIGESANLALILHSLQGPA*PKCRGA
Trigger: GGCGCCGCGACATTTGGGGCAGGCTGGGCCCTGCAG...GGAGTGGAGAATCAGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAATGCACACGCAGCGCTTaGGCTCGATCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREECTRSA*ARSPPA
Trigger: TGCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCA...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAAATGGGCATGCTCTCCTaGTTGCAGAGGCCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREEMGMLS*LQRPRS
Trigger: GGACCGAGGCCTCTGCAAGCAGGAGAGCATGCCCAT...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCTGGTCTTGGGCCCTCTaGTTCCCTGGGCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLWSWAL*FPGPLL
Trigger: AAGAAGGGGCCCAGGGAAGCAGAGGGCCCAAGACCA...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTGCAGGAGAGGGAGCGTaGGGCCATGGCGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLAGEGA*GHGAAA
Trigger: TGCCGCAGCGCCATGGCCCCACGCTCCCTCTCCTGC...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGAGGAACCTTCCGGCTaGACTCTCGGCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLPRSLSMSLKARLPGEPEEPSG*TLGPLG
Trigger: CCCCAGAGGGCCGAGAGTCCAGCCGGAAGGTTCCTC...TGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCAAGGAGACAGAGAGCTaGGTGTTAGGGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: RPAGRTARATLAPTSSKPKETES*VLGLRL
Trigger: CAGGCGAAGCCCTAACACCCAGCTCTCTGTCTCCTT...GGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCCATGCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGGAGACAGAGAGCTaGGTGTTAGGGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: PMLTSGLVQEEGCTTPSGKETES*VLGLRL
Trigger: CAGGCGAAGCCCTAACACCCAGCTCTCTGTCTCCTT...CCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTGGATGTTGCCGTCAATaGTGGAGGGCCATTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VQEEGCTTPSGKNSQSDSGCCRQ*WRAIGP
Trigger: CGGGCCAATGGCCCTCCACCATTGACGGCAACATCC...AGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAAGGCGTGAGGCTGTTGTaGCGGGGATGTTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREEGVRLL*RGCCRQ
Trigger: TTGACGGCAACATCCCCGCCACAACAGCCTCACGCC...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGACACAAGGAGTGGTCTTaGTGGGCGTCCCGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGHKEWS*WASRPS
Trigger: GGAGGGACGGGACGCCCACCAAGACCACTCCTTGTG...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGAAGCAGACTTGGCTTaGGGGAAGGCCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: RSLSMSLKARLPGEPGVPEADLA*GKARSG
Trigger: TCCACTCCTGGCCTTCCCCCAAGCCAAGTCTGCTTC...GGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCATGGGGTGGAGCCGGCTaGCTCCTTGGAGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TLPRSLSMSLKARLPGEPWGGAG*LLGVAE
Trigger: CTCTGCCACTCCAAGGAGCCAGCCGGCTCCACCCCA...TGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTGGCAACGGTGTCGAGTaGCTCCGGGCCCGGCCCGAT +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLGNGVE*LRARPD
Trigger: ATCGGGCCGGGCCCGGAGCCACTCGACACCGTTGCC...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTACGCTCCACCTTGCCTaGACCCTCGGCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: REEQPERLSPQPQANPPPTLHLA*TLGTAI
Trigger: AATGGCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGT...AGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTCCCCTGGCTTCTCACTaGGATCCCCGATGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPPLASH*DPRCPR
Trigger: CCTGGGACATCGGGGATCCCAGTGAGAAGCCAGGGG...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGAAGTCTCCATTGCGGTaGCAGGCGGGGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SHVVFQCLSRRGSRESQAKSPLR*QAGKVW
Trigger: CCAGACCTTCCCCGCCTGCCACCGCAATGGAGACTT...CGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp AAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCCCAGGGCCGGGGTGTGTaGAGCACGACCTGCCGGACT +
Preference number: 4 (lower is better)
Translates to: KRAPPSGTLVPLFQLTHPQGRGV*STTCRT
Trigger: AGTCCGGCAGGTCGTGCTCCACACACCCCGGCCCTG...GGGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCAGTGCGTGGTCACCTTaGCCGCCGAGTACACCATGG +
Preference number: 4 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLSAWSP*PPSTPW
Trigger: CCATGGTGTACTCGGCGGTCAAGGTGACCACGCACT...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp AAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCCAGGCAGGGGGTCTCTTaGGCCCAGCTGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRAPPSGTLVPLFQLTHPRQGVS*AQLLWL
Trigger: CAGCCACAGCAGCTGGGCTCAAGAGACCCCCTGCCT...GGGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTCGACACTGTCCATGCTaGCCACCGAGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPRHCPC*PPSGRR
Trigger: TCTCCTGCCACTCGGTGGGCAGCATGGACAGTGTCG...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTTTGTGGCGGGGATGTTaGCGTCAATGGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPLWRGC*RQWWRA
Trigger: GGCCCTCCACCATTGACGGCAACATCCCCGCCACAA...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACTCTCTTGAGCCCAGCTaGTGTGGCTGGGTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: NAQREEQPERLSPQPQANSLEPS*CGWVGP
Trigger: TGGACCTACCCAGCCACAGCAGCTGGGCTCAAGAGA...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCTGCACACGCAGCGCTTaGGCTCGATCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLCTRSA*ARSPPA
Trigger: TGCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCA...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCGGGCCACCTCCTTACTaGAGCTCCTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLGPPPY*SSSWPP
Trigger: AGGAGGCCAAGAGGAGCTCCAGTAAGGAGGTGGCCC...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAATACACAGGCTCTTCCTaGGCACCCACATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ADLWLGSGGGVYNAQREEYTGSS*APTSGS
Trigger: GGACCCTGATGTGGGTGCCCAGGAAGAGCCTGTGTA...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTTACACAGGCTCTTCCTaGGCACCCACATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VQEEGCTTPSGKNSQSDSYTGSS*APTSGS
Trigger: GGACCCTGATGTGGGTGCCCAGGAAGAGCCTGTGTA...AGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp AAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCCATGGTGGAGGGCCATTaGCCCGGCCTTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KRAPPSGTLVPLFQLTHPMVEGH*PGLPQP
Trigger: AGGCTGGGGAAGGCCGGGCCAATGGCCCTCCACCAT...GGGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCGGATGTTGCCGTCAATaGTGGAGGGCCATTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLGCCRQ*WRAIGP
Trigger: CGGGCCAATGGCCCTCCACCATTGACGGCAACATCC...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGGATTTCACAAGGAGTaGTCTTGGTGGGCGTCCCGT +
Preference number: 4 (lower is better)
Translates to: RSLSMSLKARLPGEPGVPGFHKE*SWWASR
Trigger: ACGGGACGCCCACCAAGACCACTCCTTGTGAAATCC...GGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACGAAGCAGACTTGGCTTaGGGGAAGGCCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNEADLA*GKARSG
Trigger: TCCACTCCTGGCCTTCCCCCAAGCCAAGTCTGCTTC...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCAGCCGGCTGGCTCCTTaGAGTGGCAGAGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLSRLAP*SGRGQV
Trigger: TACCTGTCCTCTGCCACTCCAAGGAGCCAGCCGGCT...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTGGCTGGCCAGAGCCCTaGGGTGGCAACGGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLGWPEP*GGNGVE
Trigger: CTCGACACCGTTGCCACCCCAGGGCTCTGGCCAGCC...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCCAGGGGGCCTTGAGCTaGTACACAGCATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLQGALS*YTASHG
Trigger: TCCATGGGATGCTGTGTACCAGCTCAAGGCCCCCTG...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGCAGGGGGCCTTGAGCTaGTACACAGCATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: SHVVFQCLSRRGSRESQAQGALS*YTASHG
Trigger: TCCATGGGATGCTGTGTACCAGCTCAAGGCCCCCTG...CGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCCCTTGCTCCTGCAGCTaGATCTTGACCATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: RSLSMSLKARLPGEPGVPPCSCS*ILTMGD
Trigger: ATCCCCCATGGTCAAGATCCAGCTGCAGGAGCAAGG...GGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGGGCACAGGAGATGCTaGCAAAAGCACCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGGHRRC*QKHPHR
Trigger: CCGATGGGGGTGCTTTTGCCAGCATCTCCTGTGCCC...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTAGGTCTGGCAGGGAATaGGCAGCGCGGTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLRSGRE*AARCGS
Trigger: GGAGCCGCACCGCGCTGCCCATTCCCTGCCAGACCT...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGTCTCAGCAGCGCTGTTaGCATCCTAAGCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: AWFRRRGVQRPAGRTARASQQRC*HPKPNG
Trigger: CCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGA...CGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp ATGGACGGCGGGGCCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTTGGGGTTGGCTTCTGTaGGCCTGCTTTCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MDGGAFRHWHWGECKLGPWGWLL*ACFLAG
Trigger: CCCAGCAAGAAAGCAGGCTCACAGAAGCCAACCCCA...AGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR TCA 90 bp GAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCTGGCACAGGGGGCCTTaGGCTGGTACACAGCATCCC +
Preference number: 4 (lower is better)
Translates to: EKSSSIWHSSPSLSAHPPWHRGP*AGTQHP
Trigger: GGGATGCTGTGTACCAGCTCAAGGCCCCCTGTGCCA...GGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGTCGGTCCCTTGCTCCTaGAGCTGGATCTTGACCATG +
Preference number: 4 (lower is better)
Translates to: WLGSGGGVYNAQREEQPESVPCS*SWILTM
Trigger: CATGGTCAAGATCCAGCTGCAGGAGCAAGGGACCGA...CTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCCGTACTGGAGCTCCTCTTaGCCTCCTCTTCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: EQPERLSPQPQANPPPPPYWSSS*PPLPCA
Trigger: AGCACAAGGAAGAGGAGGCCAAGAGGAGCTCCAGTA...CGGAGGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCGGATTTCACAAGGAGTaGTCTTGGTGGGCGTCCCGT +
Preference number: 4 (lower is better)
Translates to: GRTARATLAPTSSKPSSSGFHKE*SWWASR
Trigger: ACGGGACGCCCACCAAGACCACTCCTTGTGAAATCC...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCGCTGGCTCCTTGGAGTaGCAGAGGACAGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: ALSHVVFQCLSRRGSRESAGSLE*QRTGSL
Trigger: AAGGCTACCTGTCCTCTGCCACTCCAAGGAGCCAGC...GCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGCTGGCTCCTTGGAGTaGCAGAGGACAGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGAGSLE*QRTGSL
Trigger: AAGGCTACCTGTCCTCTGCCACTCCAAGGAGCCAGC...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACGGCAACGGTGTCGAGTaGCTCCGGGCCCGGCCCGAT +
Preference number: 4 (lower is better)
Translates to: SLEKSSSIWHSSPSLSAHGNGVE*LRARPD
Trigger: ATCGGGCCGGGCCCGGAGCCACTCGACACCGTTGCC...GTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCGCCGAGTACACCATaGTGTAAGACACGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: NAQREEQPERLSPQPQANPPSTP*CKTRPC
Trigger: ACAAGGCCGTGTCTTACACCATGGTGTACTCGGCGG...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCCCGCCGAGTACACCATaGTGTAAGACACGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LPRSLSMSLKARLPGEPGPPSTP*CKTRPC
Trigger: ACAAGGCCGTGTCTTACACCATGGTGTACTCGGCGG...GCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCCTTGCTCCTGCAGCTaGATCTTGACCATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: WLGSGGGVYNAQREEQPEPCSCS*ILTMGD
Trigger: ATCCCCCATGGTCAAGATCCAGCTGCAGGAGCAAGG...CTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GGTGGCATGGACGGCGGGGCCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTTCGGTCCCTTGCTCCTaGAGCTGGATCTTGACCATG +
Preference number: 4 (lower is better)
Translates to: GGMDGGAFRHWHWGECKLSVPCS*SWILTM
Trigger: CATGGTCAAGATCCAGCTGCAGGAGCAAGGGACCGA...AAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCATGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp TCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACGAATGGGCAGCGCGGTaGGGCTCCCTCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLEKSSSIWHSSPSLSAHEWAAR*GSLLGL
Trigger: GAGACCGAGGAGGGAGCCGCACCGCGCTGCCCATTC...GTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp GAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCATGGGCATGCTCTCCTaGTTGCAGAGGCCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: EKSSSIWHSSPSLSAHPPMGMLS*LQRPRS
Trigger: GGACCGAGGCCTCTGCAAGCAGGAGAGCATGCCCAT...GGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCTCCACTCCAGCTTaGTTTTTCGGTAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLASTPA*FFGRGG
Trigger: ACCTCCTCTACCGAAAAACCAAGCTGGAGTGGAGGC...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp CCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTGATTCTCCACTCCAGCCTGCTTTCTTGCTaGGGGGCGTCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLGIGIGESANLALILHSSLLSC*GASLPQ
Trigger: CTGGGGCAGAGACGCCCCCCAGCAAGAAAGCAGGCT...GGAGTGGAGAATCAGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGTACACAGCATCCCATaGAGGACCGAGATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLVHSIP*RTEISF
Trigger: GAAGGAGATCTCGGTCCTCCATGGGATGCTGTGTAC...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACGTACACAGCATCCCATaGAGGACCGAGATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNVHSIP*RTEISF
Trigger: GAAGGAGATCTCGGTCCTCCATGGGATGCTGTGTAC...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTTCTCAGCAGCGCTGTTaGCATCCTAAGCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPSQQRC*HPKPNG
Trigger: CCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGA...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR TCA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCGTGCAAACTTGGCCCTaGTTCTCCACTCCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLVQTWP*FSTPSS
Trigger: TGAGCTAGGAGTGGAGAATCAGGGCCAAGTTTGCAC...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR TCA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCAGAGCAGGCCACACTaGCTACCAAATTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NAQREEQPERLSPQPQANQSRPH*LPNSGK
Trigger: TTTGCCAGAATTTGGTAGTCAGTGTGGCCTGCTCTG...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGATCCTCTTCCTTGTGCTaGCTCCACTCCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGSSSLC*LHSSLV
Trigger: AACCAAGCTGGAGTGGAGGCAGCACAAGGAAGAGGA...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp AAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCCGCCTCCTCTTCCTTGTaGTGCCTCCACTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KRAPPSGTLVPLFQLTHPASSSL*CLHSSL
Trigger: CAAGCTGGAGTGGAGGCAGCACAAGGAAGAGGAGGC...GGGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp GAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCTCTCTTGAGCCCAGCTaGTGTGGCTGGGTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: EKSSSIWHSSPSLSAHPPSLEPS*CGWVGP
Trigger: TGGACCTACCCAGCCACAGCAGCTGGGCTCAAGAGA...GGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACTGGCATTGGGGAGAGTaGAAACTTGGCCCTGATTCT +
Preference number: 4 (lower is better)
Translates to: NAQREEQPERLSPQPQANWHWGE*KLGPDS
Trigger: AGAATCAGGGCCAAGTTTGCACTCTCCCCAATGCCA...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCGGTCCACTCCCCATaGAGACCCCTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLSVHSP*RPLLGC
Trigger: ACAGCCAAGGAGGGGTCTGCATGGGGAGTGGACCGA...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR GCA 90 bp CCCATGCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGTGTGTCCAACTCCTTTaGTTTTCTCCCTCCATAGAG +
Preference number: 4 (lower is better)
Translates to: PMLTSGLVQEEGCTTPSGCVQLL*FSPSIE
Trigger: CTCTATGGAGGGAGAAAAGCAAAGGAGTTGGACACA...CCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTGGCGTGAGGCTGTTGTaGCGGGGATGTTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLGVRLL*RGCCRQ
Trigger: TTGACGGCAACATCCCCGCCACAACAGCCTCACGCC...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp TCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACAAGGAGTGGTCTTGGTaGGCGTCCCGTCCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SLEKSSSIWHSSPSLSAHKEWSW*ASRPSG
Trigger: GCCGGAGGGACGGGACGCCCACCAAGACCACTCCTT...GTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTAGCCGGCTGGCTCCTTaGAGTGGCAGAGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLSRLAP*SGRGQV
Trigger: TACCTGTCCTCTGCCACTCCAAGGAGCCAGCCGGCT...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GAACTAAATAAGATGCCTGATTCAGAGCAGGCCACACTGACTACCAAATTCTGGCAGCTGCTGCGCCCATaGCCCCACCGTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELNKMPDSEQATLTTKFWQLLRP*PHRGGW
Trigger: CCAGCCCCCACGGTGGGGCCATGGGCGCAGCAGCTG...CCAGAATTTGGTAGTCAGTGTGGCCTGCTCTGAATCAGGCATCTTATTTAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp GAACTAAATAAGATGCCTGATTCAGAGCAGGCCACACTGACTACCAAATTCTGGCCCATGGCCCCACCGTaGGGGCTGGTCTTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ELNKMPDSEQATLTTKFWPMAPP*GLVFPG
Trigger: GCCAGGGAAGACCAGCCCCCACGGTGGGGCCATGGG...CCAGAATTTGGTAGTCAGTGTGGCCTGCTCTGAATCAGGCATCTTATTTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp CTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCTTTAGGCATTGGCATTaGGGAGAGTGCAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: LPRSLSMSLKARLPGEPGFRHWH*GECKLG
Trigger: GCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAA...GCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp AAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCCTACTGTGAATGGTCTTaGGCCCTCTGCTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KRAPPSGTLVPLFQLTHPYCEWS*ALCFPG
Trigger: CCCAGGGAAGCAGAGGGCCCAAGACCATTCACAGTA...GGGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR TCA 90 bp TCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACAGTGCGTGGTCACCTTaGCCGCCGAGTACACCATGG +
Preference number: 4 (lower is better)
Translates to: SLEKSSSIWHSSPSLSAHSAWSP*PPSTPW
Trigger: CCATGGTGTACTCGGCGGTCAAGGTGACCACGCACT...GTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR GCA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCCTTGTCCAACTCCTTTaGTTTTCTCCCTCCATAGAG +
Preference number: 4 (lower is better)
Translates to: FRRRGVQRPAGRTARATLLVQLL*FSPSIE
Trigger: CTCTATGGAGGGAGAAAAGCAAAGGAGTTGGACAAG...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp TCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACACGCTCCACCTTGCCTaGACCCTCGGCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: SLEKSSSIWHSSPSLSAHTLHLA*TLGTAI
Trigger: AATGGCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGT...GTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTTCATCTCTTCATAGATaGCCTCACTCTCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VQEEGCTTPSGKNSQSDSSSLHR*PHSLQS
Trigger: ACTCTGAAGAGAGTGAGGCCATCTATGAAGAGATGA...AGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp CCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTGATTCTCCACTCCGGGGCCTTTAGGCATTaGCATTGGGGAGAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PLGIGIGESANLALILHSGAFRH*HWGECK
Trigger: TTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCC...GGAGTGGAGAATCAGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp GCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCTGTAAATACTGTGAATaGTCTTGGGCCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALSHVVFQCLSRRGSRESCKYCE*SWALCF
Trigger: GAAGCAGAGGGCCCAAGACCATTCACAGTATTTACA...GCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTTCATCTCTTCATAGATaGCCTCACTCTCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPSSLHR*PHSLQS
Trigger: ACTCTGAAGAGAGTGAGGCCATCTATGAAGAGATGA...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTAAGAGCTCCTCCATCTaGCACTCTAGTCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLKSSSI*HSSPSL
Trigger: AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTT...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CCA 90 bp GAACTAAATAAGATGCCTGATTCAGAGCAGGCCACACTGACTACCAAATTCTGGGGGCACAGGAGATGCTaGCAAAAGCACCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: ELNKMPDSEQATLTTKFWGHRRC*QKHPHR
Trigger: CCGATGGGGGTGCTTTTGCCAGCATCTCCTGTGCCC...CCAGAATTTGGTAGTCAGTGTGGCCTGCTCTGAATCAGGCATCTTATTTAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CCA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACCTGACTACCAAATTCTaGCAAATTGTAAATACTGTG +
Preference number: 4 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNLTTKF*QIVNTV
Trigger: CACAGTATTTACAATTTGCCAGAATTTGGTAGTCAG...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS CCA 90 bp TCGAGTGGCTCCGGGCCCGGCCCGATGGTCCCAGCAGCAGCAGGTTaGCAGCAGGAGGTGGAGGCGGTGGGGGAGGCGTCTCCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: SSGSGPGPMVPAAAG*QQEVEAVGEASPAP
Trigger: GGGAGCGGGAGACGCCTCCCCCACCGCCTCCACCTCCTGCTGCCAACCTGCTGCTGCTGGGACCATCGGGCCGGGCCCGGAGCCACTCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS TCA 90 bp AGGAGTGGTCTTGGTGGGCGTCCCGTCCCTCCGGCTCGGGAGGGCTaGAGCTGGGCGGCGGTGGGCATGGGGCGGAAGGGCGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RSGLGGRPVPPAREG*SWAAVGMGRKGVRL
Trigger: CAGCCTCACGCCCTTCCGCCCCATGCCCACCGCCGCCCAGCTTCAGCCCTCCCGAGCCGGAGGGACGGGACGCCCACCAAGACCACTCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS GCA 90 bp GGCTCGGGTCCCCGCCGCCAGCTGGGGAGGATGGGCATGCTCTCCTaGTTGCAGAGGCCTCGGTCCGGGCGGTGGCGCGCCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: GSGPRRQLGRMGMLS*LQRPRSGRWRALIS
Trigger: GGAGATCAAGGCGCGCCACCGCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCATGCCCATCCTCCCCAGCTGGCGGCGGGGACCCGAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS CCA 90 bp GCCCTGGGGTGGCAACGGTGTCGAGTGGCTCCGGGCCCGGCCCGATaGTCCCAGCAGCAGCAGGTTGGCAGCAGGAGGTGGAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: ALGWQRCRVAPGPAR*SQQQQVGSRRWRRW
Trigger: CCACCGCCTCCACCTCCTGCTGCCAACCTGCTGCTGCTGGGACCATCGGGCCGGGCCCGGAGCCACTCGACACCGTTGCCACCCCAGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 90 bp AGCTGGGCGGCGGTGGGCATGGGGCGGAAGGGCGTGAGGCTGTTGTaGCGGGGATGTTGCCGTCAATGGTGGAGGGCCATTGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: SWAAVGMGRKGVRLL*RGCCRQWWRAIGPA
Trigger: GGCCGGGCCAATGGCCCTCCACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCCCATGCCCACCGCCGCCCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS TCA 90 bp GGGAGGGCTGAAGCTGGGCGGCGGTGGGCATGGGGCGGAAGGGCGTaGGGCTGTTGTGGCGGGGATGTTGCCGTCAATGGTGGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GRAEAGRRWAWGGRA*GCCGGDVAVNGGGP
Trigger: TGGCCCTCCACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCCCATGCCCACCGCCGCCCAGCTTCAGCCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS GCA 90 bp CTGGGATCCCCGATGTCCCAGGGCCCCTGTCCTCACGCTCCACCTTaGCTGGACCCTCGGCACTGCCATTCCAGGCCCGGGCACCGTCCT +
Preference number: 5 (lower is better)
Translates to: LGSPMSQGPCPHAPP*LDPRHCHSRPGHRP
Trigger: AGGACGGTGCCCGGGCCTGGAATGGCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGGACAGGGGCCCTGGGACATCGGGGATCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000496985.1
CDS CCA 90 bp GATCCCCGATGTCCCAGGGCCCCTGTCCTCACGCTCCACCTTGCCTaGACCCTCGGCACTGCCATTCCAGGCCCGGGCACCGTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: DPRCPRAPVLTLHLA*TLGTAIPGPGTVLD
Trigger: GTCGAGGACGGTGCCCGGGCCTGGAATGGCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGGACAGGGGCCCTGGGACATCGGGGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000496985.1
CDS CCA 90 bp TGGGCAGCGCGGTGCGGCTCCCTCCTCGGTCTCCATGGTGGATCCTaGCCAGCAGTCCCTCTGCCCCCTGGCTTCTCACTGGGATCCCCG +
Preference number: 5 (lower is better)
Translates to: WAARCGSLLGLHGGS*PAVPLPPGFSLGSP
Trigger: CGGGGATCCCAGTGAGAAGCCAGGGGGCAGAGGGACTGCTGGCCAGGATCCACCATGGAGACCGAGGAGGGAGCCGCACCGCGCTGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000496985.1
CDS CCA 90 bp GGGCGGAAGGGCGTGAGGCTGTTGTGGCGGGGATGTTGCCGTCAATaGTGGAGGGCCATTGGCCCGGCCTTCCCCAGCCTCTTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: GRKGVRLLWRGCCRQ*WRAIGPAFPSLFRQ
Trigger: CTGCCGGAAGAGGCTGGGGAAGGCCGGGCCAATGGCCCTCCACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAGGCGTGCCCGCCCCCTCCTCCTCACGCTCCACCTaGCCTGGACCCTCGGCACTG +
Preference number: 5 (lower is better)
Translates to: SMSLKARLPGEPGVPAPSSSRST*PGPSAL
Trigger: CAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGGA...GGAGGGGGCGGGCACGCCTGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS TCA 90 bp TGCTCTCCTGCTTGCAGAGGCCTCGGTCCGGGCGGTGGCGCGCCTTaGTCTCCTTGCACACGCAGCGCTTGCGCTCGATCACCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: CSPACRGLGPGGGAP*SPCTRSACARSPPA
Trigger: TGCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS CCA 90 bp AGGATGGGCATGCTCTCCTGCTTGCAGAGGCCTCGGTCCGGGCGGTaGCGCGCCTTGATCTCCTTGCACACGCAGCGCTTGCGCTCGATC +
Preference number: 5 (lower is better)
Translates to: RMGMLSCLQRPRSGR*RALISLHTQRLRSI
Trigger: GATCGAGCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCATGCCCATCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS-3UTR CAA 90 bp GCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGGGGTGTCTCCGGGGCTaGGCAGGGGGTCTTCGGGTG +
Preference number: 5 (lower is better)
Translates to: AWFRRRGVQRPAGRTARAGCLRG*AGGLRV
Trigger: CACCCGAAGACCCCCTGCCAAGCCCCGGAGACACCC...CGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCCGTGCAGGCACTaGGGGAGCTGGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PSGKNSQSDSRPNLKQTLLPCRH*GSWGGA
Trigger: GGCTCCACCCCAGCTCCCCAAGTGCCTGCACGGGAG...GAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTGGGTGTCTCCGGGGCTaGGCAGGGGGTCTTCGGGTG +
Preference number: 5 (lower is better)
Translates to: REEQPERLSPQPQANPPPGCLRG*AGGLRV
Trigger: CACCCGAAGACCCCCTGCCAAGCCCCGGAGACACCC...AGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS GCA 90 bp TCGAAGGAGACAGAGAGCTGGGTGTTAGGGCTTCGCCTGGGCTTCTaGGGAGGAACCTTCCGGCTGGACTCTCGGCCCTCTGGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: SKETESWVLGLRLGF*GGTFRLDSRPSGVG
Trigger: GCCAACCCCAGAGGGCCGAGAGTCCAGCCGGAAGGTTCCTCCGCAGAAGCCCAGGCGAAGCCCTAACACCCAGCTCTCTGTCTCCTTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 90 bp GAGGCTGTTGTGGCGGGGATGTTGCCGTCAATGGTGGAGGGCCATTaGCCCGGCCTTCCCCAGCCTCTTCCGGCAGCGGGTACTTCATCT +
Preference number: 5 (lower is better)
Translates to: EAVVAGMLPSMVEGH*PGLPQPLPAAGTSS
Trigger: AGATGAAGTACCCGCTGCCGGAAGAGGCTGGGGAAGGCCGGGCCAATGGCCCTCCACCATTGACGGCAACATCCCCGCCACAACAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CCCATGCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAGAGGACAGGTAGCCTaGAGACCCCATCGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: PMLTSGLVQEEGCTTPSGRGQVA*RPHRQG
Trigger: CCCCTGGCGATGGGGTCTCAAGGCTACCTGTCCTCT...CCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GGTGGCATGGACGGCGGGGCCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTCTCCCGTGCAGGCACTaGGGGAGCTGGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: GGMDGGAFRHWHWGECKLLPCRH*GSWGGA
Trigger: GGCTCCACCCCAGCTCCCCAAGTGCCTGCACGGGAG...AAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCATGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CAA 90 bp GCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGATCATGCTGTGGGAGTaGGGGAGCTCCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AWFRRRGVQRPAGRTARAIMLWE*GSSRSP
Trigger: GGGGGAGCGGGAGCTCCCCAACTCCCACAGCATGAT...CGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCCCGTGAAGTCTCCATaGCGGTGGCAGGCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: PSGKNSQSDSRPNLKQTLPVKSP*RWQAGK
Trigger: CTTCCCCGCCTGCCACCGCAATGGAGACTTCACGGG...GAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTGGGCGGTGGCGCGCCTaGATCTCCTTGCACACGCAG +
Preference number: 5 (lower is better)
Translates to: VQEEGCTTPSGKNSQSDSGRWRA*ISLHTQ
Trigger: CTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCC...AGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GCTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAAGGCATGCTCTCCTGCTaGCAGAGGCCTCGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: ADLWLGSGGGVYNAQREEGMLSC*QRPRSG
Trigger: CCCGGACCGAGGCCTCTGCAAGCAGGAGAGCATGCC...TTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGGGCATGCTCTCCTGCTaGCAGAGGCCTCGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: WLGSGGGVYNAQREEQPEGMLSC*QRPRSG
Trigger: CCCGGACCGAGGCCTCTGCAAGCAGGAGAGCATGCC...CTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCCCCACCATGCTGAGCTaGGTGCTGGGGTGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: FRRRGVQRPAGRTARATLPTMLS*VLGCLR
Trigger: CCGGAGACACCCCAGCACCAAGCTCAGCATGGTGGG...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCCACCATGCTGAGCTaGGTGCTGGGGTGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: NAQREEQPERLSPQPQANPTMLS*VLGCLR
Trigger: CCGGAGACACCCCAGCACCAAGCTCAGCATGGTGGG...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTCCTCCTCAGGGGGCCTACAGTaGGGTCCGGAAGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GRTARATLAPTSSKPSSSSGGLQ*GPEGCG
Trigger: CCCACAGCCTTCCGGACCCAACTGTAGGCCCCCTGA...GGAGGAGGAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCGCCTTGATCTCCTaGCACACGCAGCGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: VQEEGCTTPSGKNSQSDSRALIS*HTQRLR
Trigger: GCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCG...AGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCCGCGCCTTGATCTCCTaGCACACGCAGCGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: FRRRGVQRPAGRTARATLRALIS*HTQRLR
Trigger: GCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCG...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp ATGGACGGCGGGGCCTTTAGGCATTGGCATTGGGGAGAGTGCAAACTTGGCCCTGGGCGGTGGCGCGCCTaGATCTCCTTGCACACGCAG +
Preference number: 5 (lower is better)
Translates to: MDGGAFRHWHWGECKLGPGRWRA*ISLHTQ
Trigger: CTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCC...AGGGCCAAGTTTGCACTCTCCCCAATGCCAATGCCTAAAGGCCCCGCCGTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS TCA 90 bp CACCCAGGGGTGGACCAGCTGGCAGGACAGAGTGCGTGGTCACCTTaGCCGCCGAGTACACCATGGTGTAAGACACGGCCTTGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: HPGVDQLAGQSAWSP*PPSTPWCKTRPCPW
Trigger: CCAAGGACAAGGCCGTGTCTTACACCATGGTGTACTCGGCGGTCAAGGTGACCACGCACTCTGTCCTGCCAGCTGGTCCACCCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS GCA 90 bp TGCTTTTCTCCCTCCATAGAGGACCTTCCTCTGCAGGGCCCAGCCTaGCCCAAATGTCGCGGCGCCCACCTCCTCTTCTTCCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: CFSPSIEDLPLQGPA*PKCRGAHLLFFLLW
Trigger: CCAGAGGAGGAAGAAGAGGAGGTGGGCGCCGCGACATTTGGGGCAGGCTGGGCCCTGCAGAGGAAGGTCCTCTATGGAGGGAGAAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 90 bp CTTCCCCAGCCTCTTCCGGCAGCGGGTACTTCATCTCTTCATAGATaGCCTCACTCTCTTCAGAGTCCGAGTCGGCGCCCGCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LPQPLPAAGTSSLHR*PHSLQSPSRRPLEG
Trigger: CCCCTCCAGCGGGCGCCGACTCGGACTCTGAAGAGAGTGAGGCCATCTATGAAGAGATGAAGTACCCGCTGCCGGAAGAGGCTGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 90 bp GGTACACAGCATCCCATGGAGGACCGAGATCTCCTTCTCCGTCTTTaGCTCCCCAGCACCCAGGGGTGGACCAGCTGGCAGGACAGAGTG +
Preference number: 5 (lower is better)
Translates to: GTQHPMEDRDLLLRL*LPSTQGWTSWQDRV
Trigger: CACTCTGTCCTGCCAGCTGGTCCACCCCTGGGTGCTGGGGAGCCAAAGACGGAGAAGGAGATCTCGGTCCTCCATGGGATGCTGTGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 90 bp GTCTTCCCTGGCACAGGGGGCCTTGAGCTGGTACACAGCATCCCATaGAGGACCGAGATCTCCTTCTCCGTCTTTGGCTCCCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: VFPGTGGLELVHSIP*RTEISFSVFGSPAP
Trigger: GGGTGCTGGGGAGCCAAAGACGGAGAAGGAGATCTCGGTCCTCCATGGGATGCTGTGTACCAGCTCAAGGCCCCCTGTGCCAGGGAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp ACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCCAAATGGTGGAGGGCCATaGGCCCGGCCTTCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: TLPRSLSMSLKARLPGEPNGGGP*ARPSPA
Trigger: GGCTGGGGAAGGCCGGGCCAATGGCCCTCCACCATT...TGGCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACGTTGTGGCGGGGATGTaGCCGTCAATGGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNVVAGM*PSMVEG
Trigger: GCCCTCCACCATTGACGGCAACATCCCCGCCACAAC...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGGTTGTGGCGGGGATGTaGCCGTCAATGGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: WLGSGGGVYNAQREEQPEVVAGM*PSMVEG
Trigger: GCCCTCCACCATTGACGGCAACATCCCCGCCACAAC...CTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACTCACAAGGAGTGGTCTaGGTGGGCGTCCCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: NAQREEQPERLSPQPQANSQGVV*VGVPSL
Trigger: GAGGGACGGGACGCCCACCAAGACCACTCCTTGTGA...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAAGGAAGCAGACTTGGCTaGGGGGAAGGCCAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: QRPAGRTARATLAPTSSKGSRLG*GEGQEW
Trigger: CCACTCCTGGCCTTCCCCCAAGCCAAGTCTGCTTCC...TTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CTGACCTCTGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGAGGACAGGTAGCCTaGAGACCCCATCGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LTSGLVQEEGCTTPSGKNRGQVA*RPHRQG
Trigger: CCCCTGGCGATGGGGTCTCAAGGCTACCTGTCCTCT...GTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCAGAGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGCGAGCCGGCTGGCTCCTaGGAGTGGCAGAGGACAGGT +
Preference number: 5 (lower is better)
Translates to: ALSHVVFQCLSRRGSRESEPAGS*EWQRTG
Trigger: ACCTGTCCTCTGCCACTCCAAGGAGCCAGCCGGCTC...GCTCTCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCTTGCACACGCAGCGCTaGCGCTCGATCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FRRRGVQRPAGRTARATLLHTQR*RSITSS
Trigger: GCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAA...GAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAATTGCACACGCAGCGCTaGCGCTCGATCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QRPAGRTARATLAPTSSKLHTQR*RSITSS
Trigger: GCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAA...TTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TGGCTTGGTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCATGCAGACCCCTCCTaGGCTGTGGGGTGGCATGGA +
Preference number: 5 (lower is better)
Translates to: WLGSGGGVYNAQREEQPEHADPS*AVGWHG
Trigger: TCCATGCCACCCCACAGCCAAGGAGGGGTCTGCATG...CTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAACCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CAA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTAAGGGCGTGAGGCTGTaGTGGCGGGGATGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPKGVRL*WRGCCR
Trigger: ACGGCAACATCCCCGCCACAACAGCCTCACGCCCTT...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAAAGGGCGTGAGGCTGTaGTGGCGGGGATGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGKGVRL*WRGCCR
Trigger: ACGGCAACATCCCCGCCACAACAGCCTCACGCCCTT...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TCCTCCTCCTCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTTCACAAGGAGTGGTCTaGGTGGGCGTCCCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SSSSVSQQRCWHPKPNGPSQGVV*VGVPSL
Trigger: GAGGGACGGGACGCCCACCAAGACCACTCCTTGTGA...AGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGAGGAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GTTCAGGAGGAGGGGTGTACAACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTGAGTGCGTGGTCACCTaGACCGCCGAGTACACCATG +
Preference number: 5 (lower is better)
Translates to: VQEEGCTTPSGKNSQSDSECVVT*TAEYTM
Trigger: CATGGTGTACTCGGCGGTCAAGGTGACCACGCACTC...AGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTTGTACACCCCTCCTCCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCATCATGCTGTGGGAGTaGGGGAGCTCCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: EKSSSIWHSSPSLSAHPPIMLWE*GSSRSP
Trigger: GGGGGAGCGGGAGCTCCCCAACTCCCACAGCATGAT...GGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CCTGGCACTCTCCCACGTAGTCTTTCAATGTCTCTCAAGGCGAGGCTCCCGGGAGAGTGCGTGGTCACCTaGACCGCCGAGTACACCATG +
Preference number: 5 (lower is better)
Translates to: PGTLPRSLSMSLKARLPGECVVT*TAEYTM
Trigger: CATGGTGTACTCGGCGGTCAAGGTGACCACGCACTC...TCCCGGGAGCCTCGCCTTGAGAGACATTGAAAGACTACGTGGGAGAGTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp GAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACCCACCCTCAGGGGGCCTACAGTaGGGTCCGGAAGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: EKSSSIWHSSPSLSAHPPSGGLQ*GPEGCG
Trigger: CCCACAGCCTTCCGGACCCAACTGTAGGCCCCCTGA...GGGTGGGTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TCCGTTTCTCAGCAGCGCTGTTGGCATCCTAAGCCCAATGGGCCTGGCAGACTCACCCCCATCGGTCCCTaGCTCCTGCAGCTGGATCTT +
Preference number: 5 (lower is better)
Translates to: SVSQQRCWHPKPNGPGRLTPIGP*LLQLDL
Trigger: AAGATCCAGCTGCAGGAGCAAGGGACCGATGGGGGT...GAGTCTGCCAGGCCCATTGGGCTTAGGATGCCAACAGCGCTGCTGAGAAACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 90 bp AGCTCCTCTTGGCCTCCTCTTCCTTGTGCTGCCTCCACTCCAGCTTaGTTTTTCGGTAGAGGAGGTTCATCTCGTGGGGCAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SSSWPPLPCAASTPA*FFGRGGSSRGAGGG
Trigger: CCCACCTCCTGCCCCACGAGATGAACCTCCTCTACCGAAAAACCAAGCTGGAGTGGAGGCAGCACAAGGAAGAGGAGGCCAAGAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CAA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTCCCGTGAAGTCTCCATaGCGGTGGCAGGCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLPVKSP*RWQAGK
Trigger: CTTCCCCGCCTGCCACCGCAATGGAGACTTCACGGG...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp AACGCCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACGCACCGTCCTCGACCTaGTCCAACTCCTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: NAQREEQPERLSPQPQANAPSST*SNSFAF
Trigger: AAAAGCAAAGGAGTTGGACAAGGTCGAGGACGGTGC...GTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CAA 90 bp ACTCCCGGCTCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTACCCCCATCGGTCCCTaGCTCCTGCAGCTGGATCTT +
Preference number: 5 (lower is better)
Translates to: TPGSLEKSSSIWHSSPSLTPIGP*LLQLDL
Trigger: AAGATCCAGCTGCAGGAGCAAGGGACCGATGGGGGT...AAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGAGCCGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp TCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACTCCTCACGCTCCACCTaGCCTGGACCCTCGGCACTG +
Preference number: 5 (lower is better)
Translates to: SLEKSSSIWHSSPSLSAHSSRST*PGPSAL
Trigger: CAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGGA...GTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS-3UTR CAA 90 bp CCCAGCGGGAAGAACAGCCAGAGCGACTCTCGCCCCAACCTCAAGCAAACCCTCCTGTGTCCAACTCCTTaGCTTTTCTCCCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: PSGKNSQSDSRPNLKQTLLCPTP*LFSLHR
Trigger: TCTATGGAGGGAGAAAAGCAAAGGAGTTGGACACAG...GAGGGTTTGCTTGAGGTTGGGGCGAGAGTCGCTCTGGCTGTTCTTCCCGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454988.1
CDS-3UTR CAA 90 bp GAACTAAATAAGATGCCTGATTCAGAGCAGGCCACACTGACTACCAAATTCTGGGAGCCGGCTGGCTCCTaGGAGTGGCAGAGGACAGGT +
Preference number: 5 (lower is better)
Translates to: ELNKMPDSEQATLTTKFWEPAGS*EWQRTG
Trigger: ACCTGTCCTCTGCCACTCCAAGGAGCCAGCCGGCTC...CCAGAATTTGGTAGTCAGTGTGGCCTGCTCTGAATCAGGCATCTTATTTAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS-3UTR CAA 90 bp TCTCTAGAAAAGAGCTCCTCCATCTGGCACTCTAGTCCCTCTCTTTCAGCTCACGGGGAGAGTGCAAACTaGGCCCTGATTCTCCACTCC +
Preference number: 5 (lower is better)
Translates to: SLEKSSSIWHSSPSLSAHGESAN*ALILHS
Trigger: GGAGTGGAGAATCAGGGCCAAGTTTGCACTCTCCCC...GTGAGCTGAAAGAGAGGGACTAGAGTGCCAGATGGAGGAGCTCTTTTCTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS GCA 72 bp CCGCCTCAGATGGCGGTGTCCCAGAGGACCGTGTGCTaGCGGCGGCAGGGCGGGGTGCCGGACTTGCGGGGC +
Preference number: 6 (lower is better)
Translates to: PPQMAVSQRTVC*RRQGGVPDLRG
Trigger: GCCCCGCAAGTCCGGCACCCCGCCCTGCCGCCGGCAGCACACGGTCCTCTGGGACACCGCCATCTGAGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS GCA 72 bp CGCCCGCCTCAGATGGCGGTGTCCCAGAGGACCGTGTaGTGCCGGCGGCAGGGCGGGGTGCCGGACTTGCGG +
Preference number: 6 (lower is better)
Translates to: RPPQMAVSQRTV*CRRQGGVPDLR
Trigger: CCGCAAGTCCGGCACCCCGCCCTGCCGCCGGCAGCACACGGTCCTCTGGGACACCGCCATCTGAGGCGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS CCA 72 bp GGCTGGCCAGAGCCCTGGGGTGGCAACGGTGTCGAGTaGCTCCGGGCCCGGCCCGATGGTCCCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GWPEPWGGNGVE*LRARPDGPSSS
Trigger: GCTGCTGCTGGGACCATCGGGCCGGGCCCGGAGCCACTCGACACCGTTGCCACCCCAGGGCTCTGGCCAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp AGGGCATCCCTGGGCTGGCTGCAGGGCCGGGGTGTGTaGAGCACGACCTGCCGGACTCCGGAGGTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: RASLGWLQGRGV*STTCRTPEVEA
Trigger: CGCCTCCACCTCCGGAGTCCGGCAGGTCGTGCTCCACACACCCCGGCCCTGCAGCCAGCCCAGGGATGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS CAA 90 bp CGGTCCGGGCGGTGGCGCGCCTTGATCTCCTTGCACACGCAGCGCTaGCGCTCGATCACCTCCAGCAGCTTCCCGTCACGCTCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: RSGRWRALISLHTQR*RSITSSSFPSRSRA
Trigger: GGCCCGCGAGCGTGACGGGAAGCTGCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCCGGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS CAA 90 bp TCGGGTCCCCGCCGCCAGCTGGGGAGGATGGGCATGCTCTCCTGCTaGCAGAGGCCTCGGTCCGGGCGGTGGCGCGCCTTGATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SGPRRQLGRMGMLSC*QRPRSGRWRALISL
Trigger: CAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCATGCCCATCCTCCCCAGCTGGCGGCGGGGACCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS GCA 72 bp CCGATGTCCCAGGGCCCCTGTCCTCACGCTCCACCTTaGCTGGACCCTCGGCACTGCCATTCCAGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: PMSQGPCPHAPP*LDPRHCHSRPG
Trigger: CCCGGGCCTGGAATGGCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGGACAGGGGCCCTGGGACATCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000496985.1
CDS CCA 72 bp AGGCGTCTCCCGCTCCCGTGCAGGCACTTGGGGAGCTaGGGTGGAGCCGGCTGGCTCCTTGGAGTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: RRLPLPCRHLGS*GGAGWLLGVAE
Trigger: CTCTGCCACTCCAAGGAGCCAGCCGGCTCCACCCCAGCTCCCCAAGTGCCTGCACGGGAGCGGGAGACGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp TGTCCCAGGGCCCCTGTCCTCACGCTCCACCTTGCCTaGACCCTCGGCACTGCCATTCCAGGCCCGGGCACC +
Preference number: 6 (lower is better)
Translates to: CPRAPVLTLHLA*TLGTAIPGPGT
Trigger: GGTGCCCGGGCCTGGAATGGCAGTGCCGAGGGTCCAGGCAAGGTGGAGCGTGAGGACAGGGGCCCTGGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000496985.1
CDS CAA 72 bp GCGGCGGTGGGCATGGGGCGGAAGGGCGTGAGGCTGTaGTGGCGGGGATGTTGCCGTCAATGGTGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: AAVGMGRKGVRL*WRGCCRQWWRA
Trigger: GGCCCTCCACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCCCATGCCCACCGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp GTGGCGGGGATGTTGCCGTCAATGGTGGAGGGCCATTaGCCCGGCCTTCCCCAGCCTCTTCCGGCAGCGGGT +
Preference number: 6 (lower is better)
Translates to: VAGMLPSMVEGH*PGLPQPLPAAG
Trigger: ACCCGCTGCCGGAAGAGGCTGGGGAAGGCCGGGCCAATGGCCCTCCACCATTGACGGCAACATCCCCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CAA 72 bp AGGCCTCGGTCCGGGCGGTGGCGCGCCTTGATCTCCTaGCACACGCAGCGCTTGCGCTCGATCACCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RPRSGRWRALIS*HTQRLRSITSS
Trigger: GCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS CAA 90 bp TGCTTGCAGAGGCCTCGGTCCGGGCGGTGGCGCGCCTTGATCTCCTaGCACACGCAGCGCTTGCGCTCGATCACCTCCAGCAGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: CLQRPRSGRWRALIS*HTQRLRSITSSSFP
Trigger: CGGGAAGCTGCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGGCCTCTGCAAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS TCA 72 bp GAAGCTGGGCGGCGGTGGGCATGGGGCGGAAGGGCGTaGGGCTGTTGTGGCGGGGATGTTGCCGTCAATGGT +
Preference number: 6 (lower is better)
Translates to: EAGRRWAWGGRA*GCCGGDVAVNG
Trigger: ACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCCCATGCCCACCGCCGCCCAGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS GCA 72 bp GGGCGGAAGGGCGTGAGGCTGTTGTGGCGGGGATGTTaGCGTCAATGGTGGAGGGCCATTGGCCCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: GRKGVRLLWRGC*RQWWRAIGPAF
Trigger: GAAGGCCGGGCCAATGGCCCTCCACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp GTGAAGTCTCCATTGCGGTGGCAGGCGGGGAAGGTCTaGCAGGGAATGGGCAGCGCGGTGCGGCTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: VKSPLRWQAGKV*QGMGSAVRLPP
Trigger: AGGAGGGAGCCGCACCGCGCTGCCCATTCCCTGCCAGACCTTCCCCGCCTGCCACCGCAATGGAGACTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000496985.1
CDS CAA 72 bp GGGGCGGAAGGGCGTGAGGCTGTTGTGGCGGGGATGTaGCCGTCAATGGTGGAGGGCCATTGGCCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: GAEGREAVVAGM*PSMVEGHWPGL
Trigger: AAGGCCGGGCCAATGGCCCTCCACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CAA 90 bp ATGCTCTCCTGCTTGCAGAGGCCTCGGTCCGGGCGGTGGCGCGCCTaGATCTCCTTGCACACGCAGCGCTTGCGCTCGATCACCTCCAGC +
Preference number: 6 (lower is better)
Translates to: MLSCLQRPRSGRWRA*ISLHTQRLRSITSS
Trigger: GCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS GCA 72 bp GAGGCTCTCATAGGCAGGGGGTCTCTTGAGCCCAGCTaGTGTGGCTGGGTAGGTCCACAGCGGGGTCAGGGG +
Preference number: 6 (lower is better)
Translates to: EALIGRGSLEPS*CGWVGPQRGQG
Trigger: CCCCTGACCCCGCTGTGGACCTACCCAGCCACAGCAGCTGGGCTCAAGAGACCCCCTGCCTATGAGAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp GGCTTCGCCTGGGCTTCTGCGGAGGAACCTTCCGGCTaGACTCTCGGCCCTCTGGGGTTGGCTTCTGTGAGC +
Preference number: 6 (lower is better)
Translates to: GFAWASAEEPSG*TLGPLGLASVS
Trigger: GCTCACAGAAGCCAACCCCAGAGGGCCGAGAGTCCAGCCGGAAGGTTCCTCCGCAGAAGCCCAGGCGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp GCGGTGGGCATGGGGCGGAAGGGCGTGAGGCTGTTGTaGCGGGGATGTTGCCGTCAATGGTGGAGGGCCATT +
Preference number: 6 (lower is better)
Translates to: AVGMGRKGVRLL*RGCCRQWWRAI
Trigger: AATGGCCCTCCACCATTGACGGCAACATCCCCGCCACAACAGCCTCACGCCCTTCCGCCCCATGCCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp ATGCTCTCCTGCTTGCAGAGGCCTCGGTCCGGGCGGTaGCGCGCCTTGATCTCCTTGCACACGCAGCGCTTG +
Preference number: 6 (lower is better)
Translates to: MLSCLQRPRSGR*RALISLHTQRL
Trigger: CAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCGCCCGGACCGAGGCCTCTGCAAGCAGGAGAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS CAA 72 bp CGGTGGCGCGCCTTGATCTCCTTGCACACGCAGCGCTaGCGCTCGATCACCTCCAGCAGCTTCCCGTCACGC +
Preference number: 6 (lower is better)
Translates to: RWRALISLHTQR*RSITSSSFPSR
Trigger: GCGTGACGGGAAGCTGCTGGAGGTGATCGAGCGCAAGCGCTGCGTGTGCAAGGAGATCAAGGCGCGCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300179.7
ENST00000454988.1
ENST00000489641.1
ENST00000496985.1
CDS CAA 90 bp GGGTGGAGCCGGCTGGCTCCTTGGAGTGGCAGAGGACAGGTAGCCTaGAGACCCCATCGCCAGGGGTTCGGGAAGCAGACTTGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: GWSRLAPWSGRGQVA*RPHRQGFGKQTWLG
Trigger: CCCAAGCCAAGTCTGCTTCCCGAACCCCTGGCGATGGGGTCTCAAGGCTACCTGTCCTCTGCCACTCCAAGGAGCCAGCCGGCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS GCA 72 bp ACAGAGAGCTGGGTGTTAGGGCTTCGCCTGGGCTTCTaGGGAGGAACCTTCCGGCTGGACTCTCGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: TESWVLGLRLGF*GGTFRLDSRPS
Trigger: AGAGGGCCGAGAGTCCAGCCGGAAGGTTCCTCCGCAGAAGCCCAGGCGAAGCCCTAACACCCAGCTCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp GGGGGCTGGTCTTCCCTGGCACAGGGGGCCTTGAGCTaGTACACAGCATCCCATGGAGGACCGAGATCTCCT +
Preference number: 6 (lower is better)
Translates to: GGWSSLAQGALS*YTASHGGPRSP
Trigger: AGGAGATCTCGGTCCTCCATGGGATGCTGTGTACCAGCTCAAGGCCCCCTGTGCCAGGGAAGACCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CAA 72 bp CGGCTGGCTCCTTGGAGTGGCAGAGGACAGGTAGCCTaGAGACCCCATCGCCAGGGGTTCGGGAAGCAGACT +
Preference number: 6 (lower is better)
Translates to: RLAPWSGRGQVA*RPHRQGFGKQT
Trigger: AGTCTGCTTCCCGAACCCCTGGCGATGGGGTCTCAAGGCTACCTGTCCTCTGCCACTCCAAGGAGCCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS TCA 72 bp CCTCTTCTTCCTCCTCTGGTGTCCCTGCGCTGGCGATaGCGTGGGCACAGGAGATGCTGGCAAAAGCACCCC +
Preference number: 6 (lower is better)
Translates to: PLLPPLVSLRWR*RGHRRCWQKHP
Trigger: GGGGTGCTTTTGCCAGCATCTCCTGTGCCCACGTCATCGCCAGCGCAGGGACACCAGAGGAGGAAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS TCA 72 bp GTGGACCAGCTGGCAGGACAGAGTGCGTGGTCACCTTaGCCGCCGAGTACACCATGGTGTAAGACACGGCCT +
Preference number: 6 (lower is better)
Translates to: VDQLAGQSAWSP*PPSTPWCKTRP
Trigger: AGGCCGTGTCTTACACCATGGTGTACTCGGCGGTCAAGGTGACCACGCACTCTGTCCTGCCAGCTGGTCCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS CCA 72 bp GGCACAGGGGGCCTTGAGCTGGTACACAGCATCCCATaGAGGACCGAGATCTCCTTCTCCGTCTTTGGCTCC +
Preference number: 6 (lower is better)
Translates to: GTGGLELVHSIP*RTEISFSVFGS
Trigger: GGAGCCAAAGACGGAGAAGGAGATCTCGGTCCTCCATGGGATGCTGTGTACCAGCTCAAGGCCCCCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300179.7
ENST00000454988.1
CDS GCA 72 bp GGCCCGGGCACCGTCCTCGACCTTGTCCAACTCCTTTaGTTTTCTCCCTCCATAGAGGACCTTCCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: GPGTVLDLVQLL*FSPSIEDLPLQ
Trigger: CTGCAGAGGAAGGTCCTCTATGGAGGGAGAAAAGCAAAGGAGTTGGACAAGGTCGAGGACGGTGCCCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS CAA 72 bp AGGCCCGGGCACCGTCCTCGACCTTGTCCAACTCCTTaGCTTTTCTCCCTCCATAGAGGACCTTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RPGHRPRPCPTP*LFSLHRGPSSA
Trigger: TGCAGAGGAAGGTCCTCTATGGAGGGAGAAAAGCAAAGGAGTTGGACAAGGTCGAGGACGGTGCCCGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300179.7
CDS CAA 72 bp CCCGGGCACCGTCCTCGACCTCTGTGTCCAACTCCTTaGCTTTTCTCCCTCCATAGAGGACCTTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: PGHRPRPLCPTP*LFSLHRGPSSA
Trigger: TGCAGAGGAAGGTCCTCTATGGAGGGAGAAAAGCAAAGGAGTTGGACACAGAGGTCGAGGACGGTGCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454988.1