Pregenerated sensors for NXT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132661

Ensembl transcript IDs: ENST00000254998.3

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCAGGCCTGATCCACATAGGTCTTGAAATCCACAGATGCCATCTCTaGTTCTATGGAAGGAGGGCTCCACCAGGGTATTTCCTCTGCCTT	+
Preference number: 5 (lower is better) Translates to: AGLIHIGLEIHRCHL*FYGRRAPPGYFLCL Trigger: AAGGCAGAGGAAATACCCTGGTGGAGCCCTCCTTCCATAGAACCAGAGATGGCATCTGTGGATTTCAAGACCTATGTGGATCAGGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254998.3
CDS CCA 72 bp	TGGAAGGAGGGCTCCACCAGGGTATTTCCTCTGCCTTaGGGAACCAGGGGCTGCGCGGCGACGTCCAGGGTC	+
Preference number: 6 (lower is better) Translates to: WKEGSTRVFPLP*GTRGCAATSRV Trigger: GACCCTGGACGTCGCCGCGCAGCCCCTGGTTCCCCAAGGCAGAGGAAATACCCTGGTGGAGCCCTCCTTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254998.3
CDS CAA 72 bp	ATGGAAGGAGGGCTCCACCAGGGTATTTCCTCTGCCTaGGGGAACCAGGGGCTGCGCGGCGACGTCCAGGGT	+
Preference number: 6 (lower is better) Translates to: MEGGLHQGISSA*GNQGLRGDVQG Trigger: ACCCTGGACGTCGCCGCGCAGCCCCTGGTTCCCCAAGGCAGAGGAAATACCCTGGTGGAGCCCTCCTTCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254998.3
CDS GCA 72 bp	TTCTATGGAAGGAGGGCTCCACCAGGGTATTTCCTCTaGCTTGGGGAACCAGGGGCTGCGCGGCGACGTCCA	+
Preference number: 6 (lower is better) Translates to: FYGRRAPPGYFL*LGEPGAARRRP Trigger: TGGACGTCGCCGCGCAGCCCCTGGTTCCCCAAGGCAGAGGAAATACCCTGGTGGAGCCCTCCTTCCATAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254998.3

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