RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NXPE3 (Homo sapiens)

Ensembl gene IDs: ENSG00000144815

Ensembl transcript IDs: ENST00000273347.10, ENST00000474165.5, ENST00000477909.5, ENST00000487830.1, ENST00000491511.6, ENST00000495842.5, ENST00000616286.1

Found 554 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAGGCTCACCTCAGGTCCCAGCTCTTGGGCGTTGGCCGTCCGGATaGCCACCACGGTCTTTGGGCTTCGATCGAGGAGCCGAACCACTG +
Preference number: 1 (lower is better)
Translates to: KGSPQVPALGRWPSG*PPRSLGFDRGAEPL
Trigger: CAGTGGTTCGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 90 bp CGACCCGAGTCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTaGACTGGAGCCGCAGGGAGGAATCAGAGGCAACATCTACAAACA +
Preference number: 1 (lower is better)
Translates to: RPESRTFPSRAGSKT*TGAAGRNQRQHLQT
Trigger: TGTTTGTAGATGTTGCCTCTGATTCCTCCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGACTCGGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR CCA 90 bp TCCCAGCTCTTGGGCGTTGGCCGTCCGGATGACCACCACGGTCTTTaGGCTTCGATCGAGGAGCCGAACCACTGCTCGACGGATGTTCCT +
Preference number: 1 (lower is better)
Translates to: SQLLGVGRPDDHHGL*ASIEEPNHCSTDVP
Trigger: AGGAACATCCGTCGAGCAGTGGTTCGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 90 bp GATGACCACCACGGTCTTTGGGCTTCGATCGAGGAGCCGAACCACTaGTCGACGGATGTTCCTGAGCCGCCGGATGTACACTTCCAAAGG +
Preference number: 1 (lower is better)
Translates to: DDHHGLWASIEEPNH*STDVPEPPDVHFQR
Trigger: CCTTTGGAAGTGTACATCCGGCGGCTCAGGAACATCCGTCGAGCAGTGGTTCGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 90 bp CGAGTCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTaGAGCCGCAGGGAGGAATCAGAGGCAACATCTACAAACAAAACT +
Preference number: 1 (lower is better)
Translates to: RVPDIPLEGRLQDLD*SRREESEATSTNKT
Trigger: AGTTTTGTTTGTAGATGTTGCCTCTGATTCCTCCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR CCA 90 bp TTGTACCAGTCGCTGTTGAAAAGGCTCACCTCAGGTCCCAGCTCTTaGGCGTTGGCCGTCCGGATGACCACCACGGTCTTTGGGCTTCGA +
Preference number: 1 (lower is better)
Translates to: LYQSLLKRLTSGPSS*ALAVRMTTTVFGLR
Trigger: TCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 90 bp AAGCGGATGGGTGGACCATGGCAGCGGTATTTGAGCAGGATGTTGTaGTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTTGGGACTA +
Preference number: 1 (lower is better)
Translates to: KRMGGPWQRYLSRML*FWSTARKGPTFLGL
Trigger: TAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 90 bp ATGGGTGGACCATGGCAGCGGTATTTGAGCAGGATGTTGTGCTTCTaGTCCACTGCAAGGAAGGGACCCACATTCTTGGGACTACCCAAG +
Preference number: 1 (lower is better)
Translates to: MGGPWQRYLSRMLCF*STARKGPTFLGLPK
Trigger: CTTGGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR TCA 90 bp TTCCTGAGCCGCCGGATGTACACTTCCAAAGGGAAGGTGCTGAAGTaGGACCATACAGCTATGGCAACCACTGTGTTCTTCCCTCCCACA +
Preference number: 1 (lower is better)
Translates to: FLSRRMYTSKGKVLK*DHTAMATTVFFPPT
Trigger: TGTGGGAGGGAAGAACACAGTGGTTGCCATAGCTGTATGGTCTCACTTCAGCACCTTCCCTTTGGAAGTGTACATCCGGCGGCTCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 90 bp TGGAGCTCATTGCTAAAGACAGTCGTGAAGCGGATGGGTGGACCATaGCAGCGGTATTTGAGCAGGATGTTGTGCTTCTGGTCCACTGCA +
Preference number: 1 (lower is better)
Translates to: WSSLLKTVVKRMGGP*QRYLSRMLCFWSTA
Trigger: TGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTTCACGACTGTCTTTAGCAATGAGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR TCA 90 bp TATACTCCAACCCCTGAGAACATCCTCCGAAGGATGGTGTCCAGCTaGAAGTTGTACCAGTCGCTGTTGAAAAGGCTCACCTCAGGTCCC +
Preference number: 1 (lower is better)
Translates to: YTPTPENILRRMVSS*KLYQSLLKRLTSGP
Trigger: GGGACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAACTTTCAGCTGGACACCATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 90 bp ACCATGGCAGCGGTATTTGAGCAGGATGTTGTGCTTCTGGTCCACTaGAAGGAAGGGACCCACATTCTTGGGACTACCCAAGTTAAACTC +
Preference number: 1 (lower is better)
Translates to: TMAAVFEQDVVLLVH*KEGTHILGTTQVKL
Trigger: GAGTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 90 bp TGCCTTCTCATTAGATTCACCTCATCTTATTTCGCTTTTTCTGTGTaGCCCCTAAACGTGAGGGTGCAGTGGGCGGGTGGAGGGAGTTAC +
Preference number: 1 (lower is better)
Translates to: CLLIRFTSSYFAFSV*PLNVRVQWAGGGSY
Trigger: GTAACTCCCTCCACCCGCCCACTGCACCCTCACGTTTAGGGGCCACACAGAAAAAGCGAAATAAGATGAGGTGAATCTAATGAGAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR CCA 90 bp CACATAATGGAGCTCATTGCTAAAGACAGTCGTGAAGCGGATGGGTaGACCATGGCAGCGGTATTTGAGCAGGATGTTGTGCTTCTGGTC +
Preference number: 1 (lower is better)
Translates to: HIMELIAKDSREADG*TMAAVFEQDVVLLV
Trigger: GACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTTCACGACTGTCTTTAGCAATGAGCTCCATTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 90 bp CTAGTTAACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATaGACTCAATTTCCTTTACCAGATAAGCTACAAACACTCTACTAC +
Preference number: 1 (lower is better)
Translates to: LVNRQKMDYLCYACR*TQFPLPDKLQTLYY
Trigger: GTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR GCA 90 bp CTTTCTCTAGTTAACCGCCAGAAGATGGATTACTTGTGCTATGCATaGAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTC +
Preference number: 1 (lower is better)
Translates to: LSLVNRQKMDYLCYA*RCTQFPLPDKLQTL
Trigger: GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAACTAGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR CCA 90 bp CATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTaGAGGAGCAATGCCCGCTTTCTTTTTAAAATTCTCCTGGGAAAA +
Preference number: 1 (lower is better)
Translates to: HKKSFAQSSGIIPNH*RSNARFLFKILLGK
Trigger: TTTTCCCAGGAGAATTTTAAAAAGAAAGCGGGCATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR CCA 90 bp GTCATCACTATTTCCTTGAACAGGGTCCAGAAACAGACTCATTTCTaGCATGTAACACATGAATATATAAAGGCGTACCATATTTATTCT +
Preference number: 1 (lower is better)
Translates to: VITISLNRVQKQTHF*HVTHEYIKAYHIYS
Trigger: AGAATAAATATGGTACGCCTTTATATATTCATGTGTTACATGCCAGAAATGAGTCTGTTTCTGGACCCTGTTCAAGGAAATAGTGATGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR CAA 90 bp CAGTCGCTGTTGAAAAGGCTCACCTCAGGTCCCAGCTCTTGGGCGTaGGCCGTCCGGATGACCACCACGGTCTTTGGGCTTCGATCGAGG +
Preference number: 2 (lower is better)
Translates to: QSLLKRLTSGPSSWA*AVRMTTTVFGLRSR
Trigger: CCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCTTTTCAACAGCGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CAA 90 bp GTTGTACCAGTCGCTGTTGAAAAGGCTCACCTCAGGTCCCAGCTCTaGGGCGTTGGCCGTCCGGATGACCACCACGGTCTTTGGGCTTCG +
Preference number: 2 (lower is better)
Translates to: VVPVAVEKAHLRSQL*GVGRPDDHHGLWAS
Trigger: CGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CAA 90 bp GTGAAGCGGATGGGTGGACCATGGCAGCGGTATTTGAGCAGGATGTaGTGCTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: VKRMGGPWQRYLSRM*CFWSTARKGPTFLG
Trigger: TCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CAA 90 bp CTAAAGACAGTCGTGAAGCGGATGGGTGGACCATGGCAGCGGTATTaGAGCAGGATGTTGTGCTTCTGGTCCACTGCAAGGAAGGGACCC +
Preference number: 2 (lower is better)
Translates to: LKTVVKRMGGPWQRY*SRMLCFWSTARKGP
Trigger: GGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTTCACGACTGTCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CCA 90 bp CGACGGATGTTCCTGAGCCGCCGGATGTACACTTCCAAAGGGAAGGTGCTGAAGAGGATGTTGTGCTTCTaGTCCACTGCAAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: RRMFLSRRMYTSKGKVLKRMLCF*STARKG
Trigger: TCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCT...CTTCAGCACCTTCCCTTTGGAAGTGTACATCCGGCGGCTCAGGAACATCCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGGACCACCACGGTCTTTaGGCTTCGATCGAGGAGCCG +
Preference number: 2 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQDHHGL*ASIEEP
Trigger: CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTC...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR GCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTGAGGAGCCGAACCACTaGTCGACGGATGTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: TARRWITCAMHADALNFLEEPNH*STDVPE
Trigger: CTCAGGAACATCCGTCGAGCAGTGGTTCGGCTCCTC...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGCGGATGGGTGGACCATaGCAGCGGTATTTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQRMGGP*QRYLSR
Trigger: CCTGCTCAAATACCGCTGCCATGGTCCACCCATCCG...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CAA 90 bp GGGCAGTCATCTCTCACTGGGGCCACTTTCTGTAACTCAGGTCAATaGAGAAGGTCATTGAATATGATTCCTCCAGTCCCTTCCAAGACA +
Preference number: 2 (lower is better)
Translates to: GQSSLTGATFCNSGQ*RRSLNMIPPVPSKT
Trigger: TGTCTTGGAAGGGACTGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCCAGTGAGAGATGACTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR TCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCCTCGACGGATGTTCCTaGGCCGCCGGATGTACACTT +
Preference number: 2 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLLDGCS*AAGCTL
Trigger: AAGTGTACATCCGGCGGCTCAGGAACATCCGTCGAG...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR GCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCGCCATATCATGCCACTaGACTCCAGCCTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTAISCH*TPAWAK
Trigger: TTTTGCCCAGGCTGGAGTGCAGTGGCATGATATGGC...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCCGTGAAGCGGATGGGTaGACCATGGCAGCGGTATTT +
Preference number: 2 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLREADG*TMAAVF
Trigger: AAATACCGCTGCCATGGTCCACCCATCCGCTTCACG...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR TCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAGGGAAGGTGCTGAAGTaGGACCATACAGCTATGGCA +
Preference number: 2 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPGKVLK*DHTAMA
Trigger: TGCCATAGCTGTATGGTCTCACTTCAGCACCTTCCC...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR TCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAAAGGGAAGGTGCTaGAGTGAGACCATACAGCTA +
Preference number: 2 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLPKGRC*SETIQL
Trigger: TAGCTGTATGGTCTCACTTCAGCACCTTCCCTTTGG...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR GCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACGGGGACTACAGGTGGTaGCACCACACCCAGCTAGTT +
Preference number: 2 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNGDYRW*HHTQLV
Trigger: AACTAGCTGGGTGTGGTGGCACCACCTGTAGTCCCC...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGCAGACTGGAGTACAGTaGCACAATCAAGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMQTGVQ*HNQGSL
Trigger: CAGTGAGCCTTGATTGTGCCACTGTACTCCAGTCTG...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR TCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGAGCTTCTTCCAAGCATaGGAGAATGGGTGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMSFFQA*ENGCAF
Trigger: AAAGGCACACCCATTCTCTCATGCTTGGAAGAAGCT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR GCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGAGATCTCTTGTCTGTTaGCCAAGTGGGAGTGTAGTG +
Preference number: 2 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMRSLVC*PSGSVV
Trigger: CACTACACTCCCACTTGGGCAACAGACAAGAGATCT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR GCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATGTGCTTCTGGTCCACTaGAAGGAAGGGACCCACATT +
Preference number: 2 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHVLLVH*KEGTHI
Trigger: AATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCAC...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGACTCGCCACAAAGGTTaGTTTCATAAATCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMTRHKG*FHKSQR
Trigger: CCTCTGGGATTTATGAAACCAACCTTTGTGGCGAGT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR GCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTGCCATATCATGCCACTaGACTCCAGCCTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTAISCH*TPAWAK
Trigger: TTTTGCCCAGGCTGGAGTGCAGTGGCATGATATGGC...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATGTCTGTTGCCCAAGTaGGAGTGTAGTGGCGCAATC +
Preference number: 2 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRCLLPK*ECSGAI
Trigger: GATTGCGCCACTACACTCCCACTTGGGCAACAGACA...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR TCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACAGCTTCTTCCAAGCATaGGAGAATGGGTGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNSFFQA*ENGCAF
Trigger: AAAGGCACACCCATTCTCTCATGCTTGGAAGAAGCT...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR GCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCTGGGTGTGCCTTTTATaGCCAAATCAAGAAATACCA +
Preference number: 2 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTWVCLL*PNQEIP
Trigger: TGGTATTTCTTGATTTGGGCATAAAAGGCACACCCA...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR CAA 90 bp TCTGACTATAAGCTTTCTCTAGTTAACCGCCAGAAGATGGATTACTaGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAG +
Preference number: 2 (lower is better)
Translates to: SDYKLSLVNRQKMDY*CYACRCTQFPLPDK
Trigger: CTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAACTAGAGAAAGCTTATAGTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR TCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTGCATCAGAATCACTaGGCACTCGCCACAAAGGTT +
Preference number: 2 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRLHQNH*ALATKV
Trigger: AACCTTTGTGGCGAGTGCTCAGTGATTCTGATGCAA...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR GCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCATGCTATGCATGCAGATaGACTCAATTTCCTTTACCA +
Preference number: 2 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPCYACR*TQFPLP
Trigger: TGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR GCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTGCAATCATAACTCACTaGAGCCTCAAACTACTGGGC +
Preference number: 2 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTAIITH*SLKLLG
Trigger: GCCCAGTAGTTTGAGGCTGCAGTGAGTTATGATTGC...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR GCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTGTGGAATACCACCATTaGATCAGAATCACTGAGCAC +
Preference number: 2 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTVEYHH*IRITEH
Trigger: GTGCTCAGTGATTCTGATGCAATGGTGGTATTCCAC...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCATTAAGAGTTCTACCATaGCTAAGTCAACATTGGATA +
Preference number: 2 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPLRVLP*LSQHWI
Trigger: TATCCAATGTTGACTTAGCCATGGTAGAACTCTTAA...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR CCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACTTAACCGCCAGAAGATaGATTACTTGTGCTATGCAT +
Preference number: 2 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNLTARR*ITCAMH
Trigger: ATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAA...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR TCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTGTCAGATACTACAAGTaGTCCTTAGGTACTGTAAAG +
Preference number: 2 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTVRYYK*SLGTVK
Trigger: CTTTACAGTACCTAAGGATCACTTGTAGTATCTGAC...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR GCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATACTTGTGCTATGCATaGAGATGCACTCAATTTCCT +
Preference number: 2 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRYLCYA*RCTQFP
Trigger: AGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCTTAAGAGTTCTACCATaGCTAAGTCAACATTGGATA +
Preference number: 2 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSLRVLP*LSQHWI
Trigger: TATCCAATGTTGACTTAGCCATGGTAGAACTCTTAA...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTTTAAGAGTTCTACCATaGCTAAGTCAACATTGGATA +
Preference number: 2 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFLRVLP*LSQHWI
Trigger: TATCCAATGTTGACTTAGCCATGGTAGAACTCTTAA...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR CCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATTAAGAGTTCTACCATaGCTAAGTCAACATTGGATA +
Preference number: 2 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKLRVLP*LSQHWI
Trigger: TATCCAATGTTGACTTAGCCATGGTAGAACTCTTAA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR TCA 72 bp CCTCAGGTCCCAGCTCTTGGGCGTTGGCCGTCCGGATaGCCACCACGGTCTTTGGGCTTCGATCGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: PQVPALGRWPSG*PPRSLGFDRGA
Trigger: GGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 72 bp TCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTaGACTGGAGCCGCAGGGAGGAATCAGAGGCAACAT +
Preference number: 3 (lower is better)
Translates to: SRTFPSRAGSKT*TGAAGRNQRQH
Trigger: ATGTTGCCTCTGATTCCTCCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR CCA 72 bp TTGGGCGTTGGCCGTCCGGATGACCACCACGGTCTTTaGGCTTCGATCGAGGAGCCGAACCACTGCTCGACG +
Preference number: 3 (lower is better)
Translates to: LGVGRPDDHHGL*ASIEEPNHCST
Trigger: CGTCGAGCAGTGGTTCGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 72 bp CACGGTCTTTGGGCTTCGATCGAGGAGCCGAACCACTaGTCGACGGATGTTCCTGAGCCGCCGGATGTACAC +
Preference number: 3 (lower is better)
Translates to: HGLWASIEEPNH*STDVPEPPDVH
Trigger: GTGTACATCCGGCGGCTCAGGAACATCCGTCGAGCAGTGGTTCGGCTCCTCGATCGAAGCCCAAAGACCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 72 bp GACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTaGAGCCGCAGGGAGGAATCAGAGGCAACATCTACA +
Preference number: 3 (lower is better)
Translates to: DIPLEGRLQDLD*SRREESEATST
Trigger: TGTAGATGTTGCCTCTGATTCCTCCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR TCA 72 bp GATCGAGGAGCCGAACCACTGCTCGACGGATGTTCCTaGGCCGCCGGATGTACACTTCCAAAGGGAAGGTGC +
Preference number: 3 (lower is better)
Translates to: DRGAEPLLDGCS*AAGCTLPKGRC
Trigger: GCACCTTCCCTTTGGAAGTGTACATCCGGCGGCTCAGGAACATCCGTCGAGCAGTGGTTCGGCTCCTCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 72 bp TCGCTGTTGAAAAGGCTCACCTCAGGTCCCAGCTCTTaGGCGTTGGCCGTCCGGATGACCACCACGGTCTTT +
Preference number: 3 (lower is better)
Translates to: SLLKRLTSGPSS*ALAVRMTTTVF
Trigger: AAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCTTTTCAACAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CAA 90 bp GGCGTTGGCCGTCCGGATGACCACCACGGTCTTTGGGCTTCGATCGAGGAGCCGTATTTGAGCAGGATGTaGTGCTTCTGGTCCACTGCA +
Preference number: 3 (lower is better)
Translates to: GVGRPDDHHGLWASIEEPYLSRM*CFWSTA
Trigger: TGCAGTGGACCAGAAGCACAACATCCTGCTCAAATA...CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CAA 90 bp TCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTGGAGCCGCAGGGTGTGTCACCAAATCTTaGAGAGCTATGTCACCAAAT +
Preference number: 3 (lower is better)
Translates to: SRTFPSRAGSKTWTGAAGCVTKS*RAMSPN
Trigger: ATTTGGTGACATAGCTCTCAAAGATTTGGTGACACA...CCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR TCA 72 bp GGATGGTGTCCAGCTGAAAGTTGTACCAGTCGCTGTTaGAAAGGCTCACCTCAGGTCCCAGCTCTTGGGCGT +
Preference number: 3 (lower is better)
Translates to: GWCPAESCTSRC*KGSPQVPALGR
Trigger: ACGCCCAAGAGCTGGGACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAACTTTCAGCTGGACACCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 72 bp GGTGGACCATGGCAGCGGTATTTGAGCAGGATGTTGTaGTTCTGGTCCACTGCAAGGAAGGGACCCACATTC +
Preference number: 3 (lower is better)
Translates to: GGPWQRYLSRML*FWSTARKGPTF
Trigger: GAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 72 bp CCATGGCAGCGGTATTTGAGCAGGATGTTGTGCTTCTaGTCCACTGCAAGGAAGGGACCCACATTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: PWQRYLSRMLCF*STARKGPTFLG
Trigger: TCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR TCA 72 bp ACCCCTGAGAACATCCTCCGAAGGATGGTGTCCAGCTaGAAGTTGTACCAGTCGCTGTTGAAAAGGCTCACC +
Preference number: 3 (lower is better)
Translates to: TPENILRRMVSS*KLYQSLLKRLT
Trigger: GGTGAGCCTTTTCAACAGCGACTGGTACAACTTTCAGCTGGACACCATCCTTCGGAGGATGTTCTCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 72 bp GCGGTATTTGAGCAGGATGTTGTGCTTCTGGTCCACTaGAAGGAAGGGACCCACATTCTTGGGACTACCCAA +
Preference number: 3 (lower is better)
Translates to: AVFEQDVVLLVH*KEGTHILGTTQ
Trigger: TTGGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 72 bp TTGCTAAAGACAGTCGTGAAGCGGATGGGTGGACCATaGCAGCGGTATTTGAGCAGGATGTTGTGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: LLKTVVKRMGGP*QRYLSRMLCFW
Trigger: CCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTTCACGACTGTCTTTAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 72 bp GAGCTCATTGCTAAAGACAGTCGTGAAGCGGATGGGTaGACCATGGCAGCGGTATTTGAGCAGGATGTTGTG +
Preference number: 3 (lower is better)
Translates to: ELIAKDSREADG*TMAAVFEQDVV
Trigger: CACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTTCACGACTGTCTTTAGCAATGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACCCAGCTCTTGGGCGTaGGCCGTCCGGATGACCACC +
Preference number: 3 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPPSSWA*AVRMTT
Trigger: GGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CAA 90 bp TCTCCCAGGCATCGACGAGATATACTCCAACCCCTGAGAACATCCTCCGAAGGATTGTACCAGTCGCTGTaGAAAAGGCTCACCTCAGGT +
Preference number: 3 (lower is better)
Translates to: SPRHRRDILQPLRTSSEGLYQSL*KRLTSG
Trigger: ACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAA...TCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATATCTCGTCGATGCCTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR-3UTR CAA 90 bp GCATCGACGAGATATACTCCAACCCCTGAGAACATCCTCCGAAGGATGGTGTCCAAGGGACCCACATTCTaGGGACTACCCAAGTTAAAC +
Preference number: 3 (lower is better)
Translates to: ASTRYTPTPENILRRMVSKGPTF*GLPKLN
Trigger: GTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTT...GGACACCATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATATCTCGTCGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR TCA 72 bp CGCCGGATGTACACTTCCAAAGGGAAGGTGCTGAAGTaGGACCATACAGCTATGGCAACCACTGTGTTCTTC +
Preference number: 3 (lower is better)
Translates to: RRMYTSKGKVLK*DHTAMATTVFF
Trigger: GAAGAACACAGTGGTTGCCATAGCTGTATGGTCTCACTTCAGCACCTTCCCTTTGGAAGTGTACATCCGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 72 bp CAGCTATGGCAACCACTGTGTTCTTCCCTCCCACAATaGCATTCAGCTCATTCGCCACATAATGGAGCTCAT +
Preference number: 3 (lower is better)
Translates to: QLWQPLCSSLPQ*HSAHSPHNGAH
Trigger: ATGAGCTCCATTATGTGGCGAATGAGCTGAATGGCATTGTGGGAGGGAAGAACACAGTGGTTGCCATAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CCA 72 bp ATTAGATTCACCTCATCTTATTTCGCTTTTTCTGTGTaGCCCCTAAACGTGAGGGTGCAGTGGGCGGGTGGA +
Preference number: 3 (lower is better)
Translates to: IRFTSSYFAFSV*PLNVRVQWAGG
Trigger: TCCACCCGCCCACTGCACCCTCACGTTTAGGGGCCACACAGAAAAAGCGAAATAAGATGAGGTGAATCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR-3UTR CAA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACGCACCCAGGCTGGTCTaGACCTTCCGGGCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNAPRLV*TFRAQA
Trigger: TGCTTGAGCCCGGAAGGTCAAGACCAGCCTGGGTGC...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR CCA 72 bp ATTGCATCAGAATCACTGAGCACTCGCCACAAAGGTTaGTTTCATAAATCCCAGAGGCATCATGGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: IASESLSTRHKG*FHKSQRHHGPS
Trigger: AGAGGGACCATGATGCCTCTGGGATTTATGAAACCAACCTTTGTGGCGAGTGCTCAGTGATTCTGATGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CAA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCCCATGGCAGCGGTATTaGAGCAGGATGTTGTGCTTC +
Preference number: 3 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLPWQRY*SRMLCF
Trigger: GAAGCACAACATCCTGCTCAAATACCGCTGCCATGG...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR GCA 72 bp TCTCTTAGTGTTTCTCACAGTGTGGAATACCACCATTaGATCAGAATCACTGAGCACTCGCCACAAAGGTTG +
Preference number: 3 (lower is better)
Translates to: SLSVSHSVEYHH*IRITEHSPQRL
Trigger: CAACCTTTGTGGCGAGTGCTCAGTGATTCTGATGCAATGGTGGTATTCCACACTGTGAGAAACACTAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACAGAAGATGGATTACTaGTGCTATGCATGCAGATGC +
Preference number: 3 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPQKMDY*CYACRC
Trigger: GCATCTGCATGCATAGCACAAGTAATCCATCTTCTG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR TCA 72 bp TTTCCAGCTGTAATCAGCGATAATAACCCAAGTACGTaGCAGCATGAGAAAGACGATCAGTTTCCTTTTGAG +
Preference number: 3 (lower is better)
Translates to: FPAVISDNNPST*QHEKDDQFPFE
Trigger: CTCAAAAGGAAACTGATCGTCTTTCTCATGCTGTCACGTACTTGGGTTATTATCGCTGATTACAGCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR GCA 72 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATaGACTCAATTTCCTTTACCAGATAAGCTACAAACA +
Preference number: 3 (lower is better)
Translates to: RQKMDYLCYACR*TQFPLPDKLQT
Trigger: TGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR CCA 72 bp TCATTTGCACAATCAAGTGGCATCATTCCAAACCACTaGAGGAGCAATGCCCGCTTTCTTTTTAAAATTCTC +
Preference number: 3 (lower is better)
Translates to: SFAQSSGIIPNH*RSNARFLFKIL
Trigger: GAGAATTTTAAAAAGAAAGCGGGCATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CAA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGTACTACCAACCAAACTaGTCCCTTCCATCAAAACAT +
Preference number: 3 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMYYQPN*SLPSKH
Trigger: ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTA...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CAA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACTCGAACCAAGCACATaGGCCTTTTCAAGTAATTCA +
Preference number: 3 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKLEPST*AFSSNS
Trigger: TGAATTACTTGAAAAGGCCAATGTGCTTGGTTCGAG...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR CCA 72 bp CAGGAAAAATTACTAATGGGTACTAGGCTTAACACCTaGGTGATGAAATCATCTATACAACAAACCCCCATG +
Preference number: 3 (lower is better)
Translates to: QEKLLMGTRLNT*VMKSSIQQTPM
Trigger: CATGGGGGTTTGTTGTATAGATGATTTCATCACCCAGGTGTTAAGCCTAGTACCCATTAGTAATTTTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR-3UTR CAA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCTGTAACTCAGGTCAATaGAGAAGGTCATTGAATATG +
Preference number: 3 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLCNSGQ*RRSLNM
Trigger: CATATTCAATGACCTTCTCAATTGACCTGAGTTACA...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR CAA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTTACTACCAACCAAACTaGTCCCTTCCATCAAAACAT +
Preference number: 3 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFYYQPN*SLPSKH
Trigger: ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTA...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR CAA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTTGTAACTCAGGTCAATaGAGAAGGTCATTGAATATG +
Preference number: 3 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFCNSGQ*RRSLNM
Trigger: CATATTCAATGACCTTCTCAATTGACCTGAGTTACA...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR-3UTR CAA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACTGTAACTCAGGTCAATaGAGAAGGTCATTGAATATG +
Preference number: 3 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNCNSGQ*RRSLNM
Trigger: CATATTCAATGACCTTCTCAATTGACCTGAGTTACA...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR TCA 72 bp ACAAACGCTTCTTTACGAAAGTCTCACAAGTTTAGCTaGAAAGAGATATGGACTCTCACATACCTTATTTCA +
Preference number: 3 (lower is better)
Translates to: TNASLRKSHKFS*KEIWTLTYLIS
Trigger: TGAAATAAGGTATGTGAGAGTCCATATCTCTTTTCAGCTAAACTTGTGAGACTTTCGTAAAGAAGCGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR TCA 72 bp ATTAGATGTGGGATGAAAGTTGTTCTCACTGATAAGTaGGAGCTAAATGATGAGAACACATGGACACATAAA +
Preference number: 3 (lower is better)
Translates to: IRCGMKVVLTDK*ELNDENTWTHK
Trigger: TTTATGTGTCCATGTGTTCTCATCATTTAGCTCTCACTTATCAGTGAGAACAACTTTCATCCCACATCTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTGGAGCCGCAGGGCTTCACAAAGGGGACTaGGCCCACATCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SRTFPSRAGSKTWTGAAGLHKGD*AHIRNL
Trigger: CAGGTTCCTGATGTGGGCCCAGTCCCCTTTGTGAAG...CCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273347.10
3UTR CAA 72 bp GTCGCTGTTGAAAAGGCTCACCTCAGGTCCCAGCTCTaGGGCGTTGGCCGTCCGGATGACCACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: VAVEKAHLRSQL*GVGRPDDHHGL
Trigger: AAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCTTTTCAACAGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp TCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTGGAGCCGCAGGGAAGTACGTGACAGCATaGGAAAGACGATCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SRTFPSRAGSKTWTGAAGKYVTA*ERRSVS
Trigger: GGAAACTGATCGTCTTTCTCATGCTGTCACGTACTT...CCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp AGGCTCACCTCAGGTCCCAGCTCTTGGGCGTTGGCCGTCCGGATGACCACCACGAGGATGTTGTGCTTCTaGTCCACTGCAAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RLTSGPSSWALAVRMTTTRMLCF*STARKG
Trigger: TCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCT...CGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CAA 72 bp TTGAAAAGGCTCACCTCAGGTCCCAGCTCTTGGGCGTaGGCCGTCCGGATGACCACCACGGTCTTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LKRLTSGPSSWA*AVRMTTTVFGL
Trigger: AAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCTTTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp TCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTGGAGCCGCAGGGCGATCAGTTTCCTTTTaGGGTTACATGATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRTFPSRAGSKTWTGAAGRSVSF*GYMISS
Trigger: GCTGCTTATCATGTAACCTCAAAAGGAAACTGATCG...CCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp TCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTGGAGCCGCAGGGATATTGACACCACTCTaGAAGAAAGCACTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRTFPSRAGSKTWTGAAGILTPL*KKALSA
Trigger: TGCAGAGAGTGCTTTCTTCCAGAGTGGTGTCAATAT...CCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR TCA 90 bp TCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTGGAGCCGCAGGGGTCAGATACTACAAGTaGTCCTTAGGTACTGTAAAG +
Preference number: 4 (lower is better)
Translates to: SRTFPSRAGSKTWTGAAGVRYYK*SLGTVK
Trigger: CTTTACAGTACCTAAGGATCACTTGTAGTATCTGAC...CCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp GTCTTTGGGCTTCGATCGAGGAGCCGAACCACTGCTCGACGGATGTTCCTGAGCCGTGAAGCGGATGGGTaGACCATGGCAGCGGTATTT +
Preference number: 4 (lower is better)
Translates to: VFGLRSRSRTTARRMFLSREADG*TMAAVF
Trigger: AAATACCGCTGCCATGGTCCACCCATCCGCTTCACG...GCTCAGGAACATCCGTCGAGCAGTGGTTCGGCTCCTCGATCGAAGCCCAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CCA 90 bp GGTGCTGAAGTGAGACCATACAGCTATGGCAACCACTGTGTTCTTCCCTCCCACTCAGGTCCCAGCTCTTaGGCGTTGGCCGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: GAEVRPYSYGNHCVLPSHSGPSS*ALAVRM
Trigger: CATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGA...GTGGGAGGGAAGAACACAGTGGTTGCCATAGCTGTATGGTCTCACTTCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp GATGTTGTGCTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTTGGGACTACCCTCGACGGATGTTCCTaGGCCGCCGGATGTACACTT +
Preference number: 4 (lower is better)
Translates to: DVVLLVHCKEGTHILGTTLDGCS*AAGCTL
Trigger: AAGTGTACATCCGGCGGCTCAGGAACATCCGTCGAG...GGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR GCA 90 bp GCATCGACGAGATATACTCCAACCCCTGAGAACATCCTCCGAAGGATGGTGTCCGAGGAGCCGAACCACTaGTCGACGGATGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASTRYTPTPENILRRMVSEEPNH*STDVPE
Trigger: CTCAGGAACATCCGTCGAGCAGTGGTTCGGCTCCTC...GGACACCATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATATCTCGTCGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR GCA 90 bp GGCGTTGGCCGTCCGGATGACCACCACGGTCTTTGGGCTTCGATCGAGGAGCCGTACTTGTGCTATGCATaGAGATGCACTCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: GVGRPDDHHGLWASIEEPYLCYA*RCTQFP
Trigger: AGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA...CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
3UTR CAA 72 bp ATGGGTGGACCATGGCAGCGGTATTTGAGCAGGATGTaGTGCTTCTGGTCCACTGCAAGGAAGGGACCCACA +
Preference number: 4 (lower is better)
Translates to: MGGPWQRYLSRM*CFWSTARKGPT
Trigger: TGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp GATGTTGTGCTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTTGGGACTACCGGAGCTTCTTTGGTTTaGAGCAGAACCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DVVLLVHCKEGTHILGTTGASLV*SRTRAP
Trigger: GGGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCC...GGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTCGTTGGCCGTCCGGATaGCCACCACGGTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLRWPSG*PPRSLG
Trigger: GCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACG...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp GATGTTGTGCTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTTGGGACTACCTGTACCAGTCGCTGTTaGAAAGGCTCACCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: DVVLLVHCKEGTHILGTTCTSRC*KGSPQV
Trigger: GACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACA...GGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp ATGTTGTGCTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTTGGGACTACCCCATGGCAGCGGTATTTaGGCAGGATGTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MLCFWSTARKGPTFLGLPHGSGI*AGCCAS
Trigger: AGAAGCACAACATCCTGCTCAAATACCGCTGCCATG...GGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCGTTGGCCGTCCGGATaGCCACCACGGTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPRWPSG*PPRSLG
Trigger: GCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACG...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCACGTTGGCCGTCCGGATaGCCACCACGGTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPRWPSG*PPRSLG
Trigger: GCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACG...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CAGTCCCTTCCAAGACAGGCTAGGTTTCCAAGGGGCACACAAAGGACAAGAACAAGGATGGTGTCCAGCTaGAAGTTGTACCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: QSLPRQARFPRGTQRTRTRMVSS*KLYQSL
Trigger: CAGCGACTGGTACAACTTTCAGCTGGACACCATCCT...TGTTCTTGTCCTTTGTGTGCCCCTTGGAAACCTAGCCTGTCTTGGAAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR GCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTGGTAATCCACCACCCTaGCCACAGCCCCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLGNPPP*PQPQPA
Trigger: TGCAGGCTGGGGCTGTGGGCAGGGTGGTGGATTACC...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGGGTAATCCACCACCCTaGCCACAGCCCCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQGNPPP*PQPQPA
Trigger: TGCAGGCTGGGGCTGTGGGCAGGGTGGTGGATTACC...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTCCCCAGCCTGCAGCTTaGGGGAGTGAATTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLPQPAA*GSEFWP
Trigger: AGGCCAGAATTCACTCCCTCAAGCTGCAGGCTGGGG...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CAGTCCCTTCCAAGACAGGCTAGGTTTCCAAGGGGCACACAAAGGACAAGAACACCAAAGGGAAGGTGCTaGAGTGAGACCATACAGCTA +
Preference number: 4 (lower is better)
Translates to: QSLPRQARFPRGTQRTRTPKGRC*SETIQL
Trigger: TAGCTGTATGGTCTCACTTCAGCACCTTCCCTTTGG...TGTTCTTGTCCTTTGTGTGCCCCTTGGAAACCTAGCCTGTCTTGGAAGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR GCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTAGGAGTCCTCCTCCATaGGCTCCTGGCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPRSPPP*APGWTG
Trigger: CCCTGTCCAGCCAGGAGCGCATGGAGGAGGACTCCT...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGCCCACATCAGGAACCTaGCGGTGCAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMPTSGT*RCKAAS
Trigger: GCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGG...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCCCACATCAGGAACCTaGCGGTGCAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTPTSGT*RCKAAS
Trigger: GCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCCCTCCCTGGCACCTATaGCCACAGCCACGACTCCAG +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTPPWHL*PQPRLQ
Trigger: CTGGAGTCGTGGCTGTGGGCATAGGTGCCAGGGAGG...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR CCA 90 bp GACAAGAACATGTCCAGCTGGTTCTTCACAATAACTTCATCTGGATGCAGCTTGGACCACCACGGTCTTTaGGCTTCGATCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: DKNMSSWFFTITSSGCSLDHHGL*ASIEEP
Trigger: CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTC...CAAGCTGCATCCAGATGAAGTTATTGTGAAGAACCAGCTGGACATGTTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTATCAGGTCCCAGCTCTTaGGCGTTGGCCGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLSGPSS*ALAVRM
Trigger: CATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGA...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAGCCGGCTCCAAGACCTaGACTGGAGCCGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQAGSKT*TGAAGR
Trigger: CCTCCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGC...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGGGTAGGAGAATTGCTTaGGCCTGGGAGGTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQGRRIA*AWEVEA
Trigger: AGCCTCGACCTCCCAGGCTCAAGCAATTCTCCTACC...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCGTTGGCCGTCCGGATaGCCACCACGGTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHRWPSG*PPRSLG
Trigger: GCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CAGTCCCTTCCAAGACAGGCTAGGTTTCCAAGGGGCACACAAAGGACAAGAACAATATACTCCAACCCCTaGGAACATCCTCCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: QSLPRQARFPRGTQRTRTIYSNP*EHPPKD
Trigger: ATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATAT...TGTTCTTGTCCTTTGTGTGCCCCTTGGAAACCTAGCCTGTCTTGGAAGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGGGCAGAAGGATCCCTTaGGCCCAGGAAGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQGRRIP*AQEVKA
Trigger: AGCCTTGACTTCCTGGGCTCAAGGGATCCTTCTGCC...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCAGGAGTCCTCCTCCATaGGCTCCTGGCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLRSPPP*APGWTG
Trigger: CCCTGTCCAGCCAGGAGCGCATGGAGGAGGACTCCT...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCTCAGGAACCTGCCGGTaGAAGGCAGCCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTSGTCR*KAASKE
Trigger: CTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGA...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTATCAGGAACCTGCCGGTaGAAGGCAGCCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLSGTCR*KAASKE
Trigger: CTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGA...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGTCAGGAACCTGCCGGTaGAAGGCAGCCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMSGTCR*KAASKE
Trigger: CTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGA...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCTCTTTCGAACCGGGTTaGGTGGGCACTGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTSFEPG*VGTEEG
Trigger: GCCCTCCTCAGTGCCCACGCAACCCGGTTCGAAAGA...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTCCATGCGCTCCTGGCTaGACAGGGTCTGCTGATCAT +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLPCAPG*TGSADH
Trigger: ATGATCAGCAGACCCTGTCCAGCCAGGAGCGCATGG...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTCGGATGGGTGGACCATaGCAGCGGTATTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLRMGGP*QRYLSR
Trigger: CCTGCTCAAATACCGCTGCCATGGTCCACCCATCCG...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCGCCGTCTGACCTCGTaGCAAGAGGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNRRLTS*QEEASP
Trigger: GGGGCTGGCCTCCTCTTGCCACGAGGTCAGACGGCG...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR TCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGGGTAGGAGAATTGCTTaGGCCTGGGAGGTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMGRRIA*AWEVEA
Trigger: AGCCTCGACCTCCCAGGCTCAAGCAATTCTCCTACC...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGAGCGCTGAAGAACTCTaGTCCCTTCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQSAEEL*SLHWGG
Trigger: TCCACCCCAGTGAAGGGATCAGAGTTCTTCAGCGCT...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAATGAGCCGAGAGATATaGGATGGGCAGGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPMSREI*DGQGGV
Trigger: GACGCCTCCCTGCCCATCTCATATCTCTCGGCTCAT...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR TCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAAGAACAGTCCACCGTGTaGCAGCAGCGCCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKEQSTV*QQRQPR
Trigger: TCTTGGCTGGCGCTGCTGTCACACGGTGGACTGTTC...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR GCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTGAGGAGCCGAACCACTaGTCGACGGATGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPEEPNH*STDVPE
Trigger: CTCAGGAACATCCGTCGAGCAGTGGTTCGGCTCCTC...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGGGGGACTACAGGTGGTaGCACCACACCCAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMGDYRW*HHTQLV
Trigger: AACTAGCTGGGTGTGGTGGCACCACCTGTAGTCCCC...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTGGGGACTACAGGTGGTaGCACCACACCCAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPGDYRW*HHTQLV
Trigger: AACTAGCTGGGTGTGGTGGCACCACCTGTAGTCCCC...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACCAGGGCTCCAATTCTaGCTATGCCTTCGACCCGGG +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPPGLQF*LCLRPG
Trigger: CCCGGGTCGAAGGCATAGGCAGAATTGGAGCCCTGG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR CCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCATGCGCTCCTGGCTaGACAGGGTCTGCTGATCAT +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPPCAPG*TGSADH
Trigger: ATGATCAGCAGACCCTGTCCAGCCAGGAGCGCATGG...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp GGTGCTGAAGTGAGACCATACAGCTATGGCAACCACTGTGTTCTTCCCTCCCACATATTGACACCACTCTaGAAGAAAGCACTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GAEVRPYSYGNHCVLPSHILTPL*KKALSA
Trigger: TGCAGAGAGTGCTTTCTTCCAGAGTGGTGTCAATAT...GTGGGAGGGAAGAACACAGTGGTTGCCATAGCTGTATGGTCTCACTTCAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAAGACCACCACGGTCTTTaGGCTTCGATCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKDHHGL*ASIEEP
Trigger: CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTC...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACTCCAAGACCTGGACTaGAGCCGCAGGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLLQDLD*SRREES
Trigger: TGATTCCTCCCTGCGGCTCCAGTCCAGGTCTTGGAG...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTCGAACCGGGTTGCGTaGGCACTGAGGAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHSNRVA*ALRRAR
Trigger: TCTGGCCCTCCTCAGTGCCCACGCAACCCGGTTCGA...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCCCGAGAGATATGAGATaGGCAGGGAGGCGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTPRDMR*AGRRRQ
Trigger: TTGGCGACGCCTCCCTGCCCATCTCATATCTCTCGG...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR TCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCAGCGCTGAAGAACTCTaGTCCCTTCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTSAEEL*SLHWGG
Trigger: TCCACCCCAGTGAAGGGATCAGAGTTCTTCAGCGCT...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTGGAGCTTCTTTGGTTTaGAGCAGAACCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPGASLV*SRTRAP
Trigger: GGGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCC...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCTGGTCTTGAACTCTTaGCCTCAGGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTLVLNS*PQVIRP
Trigger: TGGGCGGATCACCTGAGGTCAAGAGTTCAAGACCAG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCTGCCCAGAGCAGCGATaGGCCGAGAGATATGAGATG +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTCPEQR*AERYEM
Trigger: CATCTCATATCTCTCGGCTCATCGCTGCTCTGGGCA...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR TCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCGCAAGTGGAGGAAACTaGGGATGGAGATGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTASGGN*GWRCSL
Trigger: GAGCGAGCATCTCCATCCTCAGTTTCCTCCACTTGC...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAAAGGAGTCCTCCTCCATaGGCTCCTGGCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKRSPPP*APGWTG
Trigger: CCCTGTCCAGCCAGGAGCGCATGGAGGAGGACTCCT...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCCCACATCAGGAACCTaGCGGTGCAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNPTSGT*RCKAAS
Trigger: GCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGG...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAAGGTAATCCACCACCCTaGCCACAGCCCCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKGNPPP*PQPQPA
Trigger: TGCAGGCTGGGGCTGTGGGCAGGGTGGTGGATTACC...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTGTGCTTCTGGTCCACTaGAAGGAAGGGACCCACATT +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLVLLVH*KEGTHI
Trigger: AATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCAC...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTCCAGGAAGTCAAGGCTaGAGTGAGCCATATCATGCC +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLPGSQG*SEPYHA
Trigger: GGCATGATATGGCTCACTGCAGCCTTGACTTCCTGG...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTCCAATTCTGCCTATaGCTTCGACCCGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSLQFCL*LRPGPP
Trigger: GGGAGGCCCGGGTCGAAGGCATAGGCAGAATTGGAG...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCTTCACAAAGGGGACTaGGCCCACATCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTLHKGD*AHIRNL
Trigger: CAGGTTCCTGATGTGGGCCCAGTCCCCTTTGTGAAG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATGACCACCACGGTCTTTaGGCTTCGATCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHDHHGL*ASIEEP
Trigger: CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTC...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTTCAGGTCCCAGCTCTTaGGCGTTGGCCGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFSGPSS*ALAVRM
Trigger: CATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGA...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGTTAGCTGCGACGCTTTaGCAACCCAGGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQLAATL*QPRAPI
Trigger: AATTGGAGCCCTGGGTTGCCAAAGCGTCGCAGCTAA...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR CCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATGGCGTTGCCGCAAGTaGAGGAAACTGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPWRCRK*RKLRME
Trigger: CTCCATCCTCAGTTTCCTCCACTTGCGGCAACGCCA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR TCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTCCCCAGCCTGCAGCTTaGGGGAGTGAATTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFPQPAA*GSEFWP
Trigger: AGGCCAGAATTCACTCCCTCAAGCTGCAGGCTGGGG...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAGGAGCTTCTTTGGTTTaGAGCAGAACCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPGASLV*SRTRAP
Trigger: GGGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCC...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAAGGAGCTTCTTTGGTTTaGAGCAGAACCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKGASLV*SRTRAP
Trigger: GGGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCC...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CAGTCCCTTCCAAGACAGGCTAGGTTTCCAAGGGGCACACAAAGGACAAGAACAAAAGTTCCTGAGCCTTaGGATAGTTCTAGACTGTTA +
Preference number: 4 (lower is better)
Translates to: QSLPRQARFPRGTQRTRTKVPEP*DSSRLL
Trigger: TAACAGTCTAGAACTATCTCAAGGCTCAGGAACTTT...TGTTCTTGTCCTTTGTGTGCCCCTTGGAAACCTAGCCTGTCTTGGAAGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp ATGTTGTGCTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTTGGGACTACCCATTCAAACCATTGCCTaGTTGTTGAGTCACCAAATA +
Preference number: 4 (lower is better)
Translates to: MLCFWSTARKGPTFLGLPIQTIA*LLSHQI
Trigger: TATTTGGTGACTCAACAATCAGGCAATGGTTTGAAT...GGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTAGGGAAGGTGCTGAAGTaGGACCATACAGCTATGGCA +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLGKVLK*DHTAMA
Trigger: TGCCATAGCTGTATGGTCTCACTTCAGCACCTTCCC...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAACTCGACGGATGTTCCTaGGCCGCCGGATGTACACTT +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQLDGCS*AAGCTL
Trigger: AAGTGTACATCCGGCGGCTCAGGAACATCCGTCGAG...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTCGACGGATGTTCCTaGGCCGCCGGATGTACACTT +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSLDGCS*AAGCTL
Trigger: AAGTGTACATCCGGCGGCTCAGGAACATCCGTCGAG...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTATGTACCAGTCGCTGTTaGAAAGGCTCACCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLCTSRC*KGSPQV
Trigger: GACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACA...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAGGCAGAAGGATCCCTTaGGCCCAGGAAGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQGRRIP*AQEVKA
Trigger: AGCCTTGACTTCCTGGGCTCAAGGGATCCTTCTGCC...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATGAGGAGCCGAACCACTaGTCGACGGATGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHEEPNH*STDVPE
Trigger: CTCAGGAACATCCGTCGAGCAGTGGTTCGGCTCCTC...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAGCTCACTGCAACCTCTaGAACCTTCTGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQAHCNL*NLLPPG
Trigger: CCCAGGAGGCAGAAGGTTGCAGAGGTTGCAGTGAGC...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCGCTCACTGCAACCTCTaGAACCTTCTGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSAHCNL*NLLPPG
Trigger: CCCAGGAGGCAGAAGGTTGCAGAGGTTGCAGTGAGC...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTATCCCTTCACTGGGGTaGACCAGAGATACGGATACT +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLIPSLG*TRDTDT
Trigger: AGTATCCGTATCTCTGGTCCACCCCAGTGAAGGGAT...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTGCAAGGGAGCTTCTTTaGTTTGAAGCAGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLARELL*FEAEPG
Trigger: CCCTGGTTCTGCTTCAAACCAAAGAAGCTCCCTTGC...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCGGATGGGTGGACCATaGCAGCGGTATTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSRMGGP*QRYLSR
Trigger: CCTGCTCAAATACCGCTGCCATGGTCCACCCATCCG...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACGTGAAGCGGATGGGTaGACCATGGCAGCGGTATTT +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKREADG*TMAAVF
Trigger: AAATACCGCTGCCATGGTCCACCCATCCGCTTCACG...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTTCAGGTCCCAGCTCTTaGGCGTTGGCCGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTSGPSS*ALAVRM
Trigger: CATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGA...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACAACCTTCTGCCTCCTaGGCTCAAGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKQPSAS*AQAILP
Trigger: TGGGAGGATTGCTTGAGCCCAGGAGGCAGAAGGTTG...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGCAGACTGGAGTACAGTaGCACAATCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQQTGVQ*HNQGSL
Trigger: CAGTGAGCCTTGATTGTGCCACTGTACTCCAGTCTG...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATGGTGCAGTGGGCGGGTaGAGGGAGTTACCTTTTACC +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHGAVGG*RELPFT
Trigger: GGTAAAAGGTAACTCCCTCCACCCGCCCACTGCACC...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTAACGTGAGGGTGCAGTaGGCGGGTGGAGGGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFNVRVQ*AGGGSY
Trigger: GTAACTCCCTCCACCCGCCCACTGCACCCTCACGTT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAAACTGTACCGAGCTGTaGCGTTGCCGCAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQNCTEL*RCRKWR
Trigger: CCTCCACTTGCGGCAACGCCACAGCTCGGTACAGTT...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGACCCCAGCCTGCAGCTTaGGGGAGTGAATTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRPQPAA*GSEFWP
Trigger: AGGCCAGAATTCACTCCCTCAAGCTGCAGGCTGGGG...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCACATGGCAGCGGTATTTaGGCAGGATGTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPHGSGI*AGCCAS
Trigger: AGAAGCACAACATCCTGCTCAAATACCGCTGCCATG...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCGGGAAGGTGCTGAAGTaGGACCATACAGCTATGGCA +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLGKVLK*DHTAMA
Trigger: TGCCATAGCTGTATGGTCTCACTTCAGCACCTTCCC...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCTGTACCAGTCGCTGTTaGAAAGGCTCACCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLCTSRC*KGSPQV
Trigger: GACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACA...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAAGGATGGTGTCCAGCTaGAAGTTGTACCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPRMVSS*KLYQSL
Trigger: CAGCGACTGGTACAACTTTCAGCTGGACACCATCCT...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAAAGGATGGTGTCCAGCTaGAAGTTGTACCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKRMVSS*KLYQSL
Trigger: CAGCGACTGGTACAACTTTCAGCTGGACACCATCCT...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATAGCACTTTGGGAAGCTaGGGTGGGCAGATGCTTGAG +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHSTLGS*GGQMLE
Trigger: CTCAAGCATCTGCCCACCTCAGCTTCCCAAAGTGCT...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCTGGTCTTGAACTCTTaGCCTCAGGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHLVLNS*PQVIRP
Trigger: TGGGCGGATCACCTGAGGTCAAGAGTTCAAGACCAG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCTCTTCCCTCCCACAATaGCATTCAGCTCATTCGCCA +
Preference number: 4 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTSSLPQ*HSAHSP
Trigger: TGGCGAATGAGCTGAATGGCATTGTGGGAGGGAAGA...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGGCAATCATAACTCACTaGAGCCTCAAACTACTGGGC +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQAIITH*SLKLLG
Trigger: GCCCAGTAGTTTGAGGCTGCAGTGAGTTATGATTGC...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTAGATCTCTTGTCTGTTaGCCAAGTGGGAGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLRSLVC*PSGSVV
Trigger: CACTACACTCCCACTTGGGCAACAGACAAGAGATCT...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAAGCCATATCATGCCACTaGACTCCAGCCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKAISCH*TPAWAK
Trigger: TTTTGCCCAGGCTGGAGTGCAGTGGCATGATATGGC...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCTCCGGCTTCTTAGCTaGGACGCTTTGGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNLRLLS*DALATQ
Trigger: CTGGGTTGCCAAAGCGTCGCAGCTAAGAAGCCGGAG...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR GCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACACCGAGCTGTGGCGTTaGCGCAAGTGGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNTELWR*RKWRKL
Trigger: CAGTTTCCTCCACTTGCGGCAACGCCACAGCTCGGT...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR CCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATGTCTTGTTCACCCATaGCCGACACCATGCTACCTT +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPCLVHP*PTPCYL
Trigger: AAGGTAGCATGGTGTCGGCCATGGGTGAACAAGACA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTTGGTCCACATTGTCTaGCTGTGTCTTGTTCACCCA +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLLVHIV*LCLVHP
Trigger: TGGGTGAACAAGACACAGCCAGACAATGTGGACCAA...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGTTGGTCCACATTGTCTaGCTGTGTCTTGTTCACCCA +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQLVHIV*LCLVHP
Trigger: TGGGTGAACAAGACACAGCCAGACAATGTGGACCAA...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAACTTCACAAAGGGGACTaGGCCCACATCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQLHKGD*AHIRNL
Trigger: CAGGTTCCTGATGTGGGCCCAGTCCCCTTTGTGAAG...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAATCCCTTCACTGGGGTaGACCAGAGATACGGATACT +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPIPSLG*TRDTDT
Trigger: AGTATCCGTATCTCTGGTCCACCCCAGTGAAGGGAT...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp GCATCGACGAGATATACTCCAACCCCTGAGAACATCCTCCGAAGGATGGTGTCCTTTCTTTTATTCTCCTaGGAATCACAGTTACCCAAT +
Preference number: 4 (lower is better)
Translates to: ASTRYTPTPENILRRMVSFLLFS*ESQLPN
Trigger: ATTGGGTAACTGTGATTCCCAGGAGAATAAAAGAAA...GGACACCATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATATCTCGTCGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTAAGGATGTTGTGCTTCTaGTCCACTGCAAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLRMLCF*STARKG
Trigger: TCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCT...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGAGGATGTTGTGCTTCTaGTCCACTGCAAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMRMLCF*STARKG
Trigger: TCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCGTGAAGCGGATGGGTaGACCATGGCAGCGGTATTT +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHREADG*TMAAVF
Trigger: AAATACCGCTGCCATGGTCCACCCATCCGCTTCACG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTGAGACCATACAGCTATaGCAACCACTGTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLETIQL*QPLCSS
Trigger: GGAAGAACACAGTGGTTGCCATAGCTGTATGGTCTC...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGAGACCACCACGGTCTTTaGGCTTCGATCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRDHHGL*ASIEEP
Trigger: CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTC...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGACATCCTCCGAAGGATaGTGTCCAGCTGAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQTSSEG*CPAESC
Trigger: ACAACTTTCAGCTGGACACCATCCTTCGGAGGATGT...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp GCATCGACGAGATATACTCCAACCCCTGAGAACATCCTCCGAAGGATGGTGTCCTTAAGAGTTCTACCATaGCTAAGTCAACATTGGATA +
Preference number: 4 (lower is better)
Translates to: ASTRYTPTPENILRRMVSLRVLP*LSQHWI
Trigger: TATCCAATGTTGACTTAGCCATGGTAGAACTCTTAA...GGACACCATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATATCTCGTCGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCATGTCTGTTGCCCAAGTaGGAGTGTAGTGGCGCAATC +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPCLLPK*ECSGAI
Trigger: GATTGCGCCACTACACTCCCACTTGGGCAACAGACA...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGAGCACTCAGGGGCTGTaGTCTCACCTTCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQSTQGL*SHLQMK
Trigger: TTTCATTTGAAGGTGAGACCACAGCCCCTGAGTGCT...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGTTCGCTTTTTCTGTGTaGCCCCTAAACGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMFAFSV*PLNVRV
Trigger: CACCCTCACGTTTAGGGGCCACACAGAAAAAGCGAA...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACTCTTTCGCTGCGGCGTaGAGGTCCGAACTGTACCGA +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNSFAAA*RSELYR
Trigger: TCGGTACAGTTCGGACCTCCACGCCGCAGCGAAAGA...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491511.6
3UTR CAA 72 bp TCTCTCACTGGGGCCACTTTCTGTAACTCAGGTCAATaGAGAAGGTCATTGAATATGATTCCTCCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SLTGATFCNSGQ*RRSLNMIPPVP
Trigger: AGGGACTGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCCAGTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
3UTR CAA 72 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATaGAATATGATTCCTCCAGTCCCTTCCAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRS*NMIPPVPSKTG
Trigger: GCCTGTCTTGGAAGGGACTGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGCAGCAGAGTTCAAGATaGCAAAGTAGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQQQSSR*QSSWKK
Trigger: CTTCTTCCAGCTACTTTGTCATCTTGAACTCTGCTG...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTAGCGCTGAAGAACTCTaGTCCCTTCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFSAEEL*SLHWGG
Trigger: TCCACCCCAGTGAAGGGATCAGAGTTCTTCAGCGCT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTATCTTCCTGTAAGCGCTaGAGAACTCTGATCCCTTCA +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLSSCKR*RTLIPS
Trigger: TGAAGGGATCAGAGTTCTTCAGCGCTTACAGGAAGA...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCTTCCTGTAAGCGCTaGAGAACTCTGATCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPSSCKR*RTLIPS
Trigger: TGAAGGGATCAGAGTTCTTCAGCGCTTACAGGAAGA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAATATACTCCAACCCCTaGGAACATCCTCCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPIYSNP*EHPPKD
Trigger: ATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATAT...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTTTGCATCAGAATCACTaGGCACTCGCCACAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPLHQNH*ALATKV
Trigger: AACCTTTGTGGCGAGTGCTCAGTGATTCTGATGCAA...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAAGGTGGGCAGATGCTTaGGCTCAGGAGTTTAAGACC +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQRWADA*AQEFKT
Trigger: GGTCTTAAACTCCTGAGCTCAAGCATCTGCCCACCT...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGCAAGAGAGTTATACATaGTATAGTGGGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQQESYT*YSGRSG
Trigger: CCCACTCCTCCCACTATATCATGTATAACTCTCTTG...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477909.5
CDS-3UTR GCA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCACCACCATCAACACTaGAAGCAGACAGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTHHHQH*KQTAEK
Trigger: CTTTTCTGCTGTCTGCTTGCAGTGTTGATGGTGGTG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCGTGCTTCTGGTCCACTaGAAGGAAGGGACCCACATT +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSVLLVH*KEGTHI
Trigger: AATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCAC...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTAGATCTCTTGTCTGTTaGCCAAGTGGGAGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPRSLVC*PSGSVV
Trigger: CACTACACTCCCACTTGGGCAACAGACAAGAGATCT...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTACAGAAGTCTTTCGCTaGGGCGTGGAGGTCCGAACT +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFTEVFR*GVEVRT
Trigger: AGTTCGGACCTCCACGCCGCAGCGAAAGACTTCTGT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS-3UTR CCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTCCATGCGCTCCTGGCTaGACAGGGTCTGCTGATCAT +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTPCAPG*TGSADH
Trigger: ATGATCAGCAGACCCTGTCCAGCCAGGAGCGCATGG...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAATCCCTTCACTGGGGTaGACCAGAGATACGGATACT +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPIPSLG*TRDTDT
Trigger: AGTATCCGTATCTCTGGTCCACCCCAGTGAAGGGAT...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTCGGATGGGTGGACCATaGCAGCGGTATTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTRMGGP*QRYLSR
Trigger: CCTGCTCAAATACCGCTGCCATGGTCCACCCATCCG...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCGTGAAGCGGATGGGTaGACCATGGCAGCGGTATTT +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNREADG*TMAAVF
Trigger: AAATACCGCTGCCATGGTCCACCCATCCGCTTCACG...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAGAGACCATACAGCTATaGCAACCACTGTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPETIQL*QPLCSS
Trigger: GGAAGAACACAGTGGTTGCCATAGCTGTATGGTCTC...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTACATCCTCCGAAGGATaGTGTCCAGCTGAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPTSSEG*CPAESC
Trigger: ACAACTTTCAGCTGGACACCATCCTTCGGAGGATGT...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAACATCCTCCGAAGGATaGTGTCCAGCTGAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPTSSEG*CPAESC
Trigger: ACAACTTTCAGCTGGACACCATCCTTCGGAGGATGT...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAAGCATGAGAGAATaGGTGTGCCTTTTATGCCCA +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPPSMRE*VCLLCP
Trigger: TGGGCATAAAAGGCACACCCATTCTCTCATGCTTGG...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTGACTATAATCCCTGCTaGGATTACAGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLDYNPC*DYRCEP
Trigger: TGGCTCACATCTGTAATCCCAGCAGGGATTATAGTC...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCAACCTTCTGCCTCCTaGGCTCAAGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNQPSAS*AQAILP
Trigger: TGGGAGGATTGCTTGAGCCCAGGAGGCAGAAGGTTG...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCAGGCTAGAGTGCAATaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHQARVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCATTGCACTCTAGCCTG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCTCCAAGTACTCTACCTaGGTAACATTGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTSKYST*VTLMTS
Trigger: GCTGGTCATCAATGTTACTCAGGTAGAGTACTTGGA...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCTCTTCCTGTAAGCGCTaGAGAACTCTGATCCCTTCA +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLSSCKR*RTLIPS
Trigger: TGAAGGGATCAGAGTTCTTCAGCGCTTACAGGAAGA...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCATGGCAGCGGTATTTaGGCAGGATGTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSHGSGI*AGCCAS
Trigger: AGAAGCACAACATCCTGCTCAAATACCGCTGCCATG...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACGGGAAGGTGCTGAAGTaGGACCATACAGCTATGGCA +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNGKVLK*DHTAMA
Trigger: TGCCATAGCTGTATGGTCTCACTTCAGCACCTTCCC...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCCAAAGGGAAGGTGCTaGAGTGAGACCATACAGCTA +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSPKGRC*SETIQL
Trigger: TAGCTGTATGGTCTCACTTCAGCACCTTCCCTTTGG...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATGTACCAGTCGCTGTTaGAAAGGCTCACCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKCTSRC*KGSPQV
Trigger: GACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTAGGATGGTGTCCAGCTaGAAGTTGTACCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFRMVSS*KLYQSL
Trigger: CAGCGACTGGTACAACTTTCAGCTGGACACCATCCT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCAGCTTCTTCCAAGCATaGGAGAATGGGTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLSFFQA*ENGCAF
Trigger: AAAGGCACACCCATTCTCTCATGCTTGGAAGAAGCT...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCACACCCTGCCATaGCTCTTTAATTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLYHTLP*LFNSAF
Trigger: AAATGCAGAATTAAAGAGTCATGGCAGGGTGTGGTA...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCTTGCATCAGAATCACTaGGCACTCGCCACAAAGGTT +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLLHQNH*ALATKV
Trigger: AACCTTTGTGGCGAGTGCTCAGTGATTCTGATGCAA...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACAGGTGGGCAGATGCTTaGGCTCAGGAGTTTAAGACC +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNRWADA*AQEFKT
Trigger: GGTCTTAAACTCCTGAGCTCAAGCATCTGCCCACCT...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTAGCACTTTGGGAAGCTaGGGTGGGCAGATGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTSTLGS*GGQMLE
Trigger: CTCAAGCATCTGCCCACCTCAGCTTCCCAAAGTGCT...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGTCATCACTATTTCCTTaGACAGGGTCCAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQSSLFP*TGSRNR
Trigger: TCTGTTTCTGGACCCTGTTCAAGGAAATAGTGATGA...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTACCACTGCACAAAACTaGAAGGATTTCTCCTATGAC +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLTTAQN*KDFSYD
Trigger: GTCATAGGAGAAATCCTTTCAGTTTTGTGCAGTGGT...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACACCACCATCAACACTaGAAGCAGACAGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPHHHQH*KQTAEK
Trigger: CTTTTCTGCTGTCTGCTTGCAGTGTTGATGGTGGTG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTGGAAGAAGGGTCAGTaGTCTTCACAAAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHWKKGQ*SSQRGL
Trigger: CAGTCCCCTTTGTGAAGAGCACTGACCCTTCTTCCA...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAAGTGCTTCTGGTCCACTaGAAGGAAGGGACCCACATT +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKVLLVH*KEGTHI
Trigger: AATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCAC...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAATCTTCCCTCCCACAATaGCATTCAGCTCATTCGCCA +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQSSLPQ*HSAHSP
Trigger: TGGCGAATGAGCTGAATGGCATTGTGGGAGGGAAGA...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAGCAATCATAACTCACTaGAGCCTCAAACTACTGGGC +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPAIITH*SLKLLG
Trigger: GCCCAGTAGTTTGAGGCTGCAGTGAGTTATGATTGC...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTGTGGAATACCACCATTaGATCAGAATCACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPVEYHH*IRITEH
Trigger: GTGCTCAGTGATTCTGATGCAATGGTGGTATTCCAC...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTAGTGGAATACCACCATTaGATCAGAATCACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLVEYHH*IRITEH
Trigger: GTGCTCAGTGATTCTGATGCAATGGTGGTATTCCAC...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCTGTCTTGTTCACCCATaGCCGACACCATGCTACCTT +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSCLVHP*PTPCYL
Trigger: AAGGTAGCATGGTGTCGGCCATGGGTGAACAAGACA...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCACCAGCACCTCAAGCTaGCTTCCCACCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSTSTSS*LPTLKK
Trigger: CTTCTTTAAGGTGGGAAGCCAGCTTGAGGTGCTGGT...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCAGGATGTTGTGCTTCTaGTCCACTGCAAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSRMLCF*STARKG
Trigger: TCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCT...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCGAGACCATACAGCTATaGCAACCACTGTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLETIQL*QPLCSS
Trigger: GGAAGAACACAGTGGTTGCCATAGCTGTATGGTCTC...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAGAGACCATACAGCTATaGCAACCACTGTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPETIQL*QPLCSS
Trigger: GGAAGAACACAGTGGTTGCCATAGCTGTATGGTCTC...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACCAAGCATGAGAGAATaGGTGTGCCTTTTATGCCCA +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKPSMRE*VCLLCP
Trigger: TGGGCATAAAAGGCACACCCATTCTCTCATGCTTGG...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTAACTCGCCACAAAGGTTaGTTTCATAAATCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLTRHKG*FHKSQR
Trigger: CCTCTGGGATTTATGAAACCAACCTTTGTGGCGAGT...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAACAGGCTAGAGTGCAATaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKQARVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCATTGCACTCTAGCCTG...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAGAACTCAGGCAATTTTaGCCAGAGGTCCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPELRQF*PEVLIF
Trigger: AAAAATGAGGACCTCTGGTCAAAATTGCCTGAGTTC...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCCAGCAGAGTTCAAGATaGCAAAGTAGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLQQSSR*QSSWKK
Trigger: CTTCTTCCAGCTACTTTGTCATCTTGAACTCTGCTG...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACAGCAGAGTTCAAGATaGCAAAGTAGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKQQSSR*QSSWKK
Trigger: CTTCTTCCAGCTACTTTGTCATCTTGAACTCTGCTG...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGAAAGTTCCTGAGCCTTaGGATAGTTCTAGACTGTTA +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQKVPEP*DSSRLL
Trigger: TAACAGTCTAGAACTATCTCAAGGCTCAGGAACTTT...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTCAGGGTCATTAAACTaGCGCATCTTAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLSGSLN*RILNFL
Trigger: CAGAAAGTTTAAGATGCGTCAGTTTAATGACCCTGA...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAACATGGCAGCGGTATTTaGGCAGGATGTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKHGSGI*AGCCAS
Trigger: AGAAGCACAACATCCTGCTCAAATACCGCTGCCATG...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGAGGGAAGGTGCTGAAGTaGGACCATACAGCTATGGCA +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRGKVLK*DHTAMA
Trigger: TGCCATAGCTGTATGGTCTCACTTCAGCACCTTCCC...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAACCAAAGGGAAGGTGCTaGAGTGAGACCATACAGCTA +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKPKGRC*SETIQL
Trigger: TAGCTGTATGGTCTCACTTCAGCACCTTCCCTTTGG...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCATATACTCCAACCCCTaGGAACATCCTCCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSIYSNP*EHPPKD
Trigger: ATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATAT...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTTACCACACCCTGCCATaGCTCTTTAATTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPYHTLP*LFNSAF
Trigger: AAATGCAGAATTAAAGAGTCATGGCAGGGTGTGGTA...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGTCTCACAAGTTTAGCTaGAAAGAGATATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQSHKFS*KEIWTL
Trigger: GAGAGTCCATATCTCTTTTCAGCTAAACTTGTGAGA...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGTCTTGTCAAGTACCCTaGTTTACCAATCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQSCQVP*FTNLQT
Trigger: AGTTTGCAGATTGGTAAATCAGGGTACTTGACAAGA...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTACCACTGCACAAAACTaGAAGGATTTCTCCTATGAC +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPTTAQN*KDFSYD
Trigger: GTCATAGGAGAAATCCTTTCAGTTTTGTGCAGTGGT...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGAGTTCAATGATCCAATaGTCTTGTTTTCCCCTACAG +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQSSMIQ*SCFPLQ
Trigger: CTGTAGGGGAAAACAAGATCATTGGATCATTGAACT...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477909.5
CDS-3UTR GCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACCATGGCCGACACCATaGTACCTTCACTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPPWPTP*YLHSLK
Trigger: TTTTAAAGAGTGAAGGTAGCATGGTGTCGGCCATGG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATGGAAGAAGGGTCAGTaGTCTTCACAAAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKWKKGQ*SSQRGL
Trigger: CAGTCCCCTTTGTGAAGAGCACTGACCCTTCTTCCA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACTGGAAGAAGGGTCAGTaGTCTTCACAAAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNWKKGQ*SSQRGL
Trigger: CAGTCCCCTTTGTGAAGAGCACTGACCCTTCTTCCA...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTAGGTATTCAAACCATTaGCTGATTGTTGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLRYSNH*LIVESP
Trigger: TGGTGACTCAACAATCAGGCAATGGTTTGAATACCT...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACTCTTCCCTCCCACAATaGCATTCAGCTCATTCGCCA +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNSSLPQ*HSAHSP
Trigger: TGGCGAATGAGCTGAATGGCATTGTGGGAGGGAAGA...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGTGCTATGCATGCAGATaGACTCAATTTCCTTTACCA +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQCYACR*TQFPLP
Trigger: TGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGTACTTGTGCTATGCATaGAGATGCACTCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQYLCYA*RCTQFP
Trigger: AGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGACCAGGAAGTCAAGGCTaGAGTGAGCCATATCATGCC +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRPGSQG*SEPYHA
Trigger: GGCATGATATGGCTCACTGCAGCCTTGACTTCCTGG...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATGTCTTGTTCACCCATaGCCGACACCATGCTACCTT +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKCLVHP*PTPCYL
Trigger: AAGGTAGCATGGTGTCGGCCATGGGTGAACAAGACA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACTAATTCCTGTCACCTaGGAGGAAACAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKLIPVT*EETNCP
Trigger: TGGACAGTTTGTTTCCTCCCAGGTGACAGGAATTAG...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAAACCAGCACCTCAAGCTaGCTTCCCACCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKTSTSS*LPTLKK
Trigger: CTTCTTTAAGGTGGGAAGCCAGCTTGAGGTGCTGGT...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTGCAAGGGAGCTTCTTTaGTTTGAAGCAGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFARELL*FEAEPG
Trigger: CCCTGGTTCTGCTTCAAACCAAAGAAGCTCCCTTGC...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp GACAAGAACATGTCCAGCTGGTTCTTCACAATAACTTCATCTGGATGCAGCTTGTTAACCGCCAGAAGATaGATTACTTGTGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: DKNMSSWFFTITSSGCSLLTARR*ITCAMH
Trigger: ATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAA...CAAGCTGCATCCAGATGAAGTTATTGTGAAGAACCAGCTGGACATGTTCTTGTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTTGTCTGTTGCCCAAGTaGGAGTGTAGTGGCGCAATC +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTCLLPK*ECSGAI
Trigger: GATTGCGCCACTACACTCCCACTTGGGCAACAGACA...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCGACTATAATCCCTGCTaGGATTACAGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLDYNPC*DYRCEP
Trigger: TGGCTCACATCTGTAATCCCAGCAGGGATTATAGTC...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTCAGACTGGAGTACAGTaGCACAATCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFQTGVQ*HNQGSL
Trigger: CAGTGAGCCTTGATTGTGCCACTGTACTCCAGTCTG...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGACAATCCAGCTGGAATaGGCATTAGATATACACATC +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQTIQLE*ALDIHI
Trigger: GATGTGTATATCTAATGCCCATTCCAGCTGGATTGT...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCAGAAAAGCCGTAGTTTaGAGAAATTGGTCCACATTG +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTRKAVV*RNWSTL
Trigger: CAATGTGGACCAATTTCTTCAAACTACGGCTTTTCT...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGAGAAAAGCCGTAGTTTaGAGAAATTGGTCCACATTG +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMRKAVV*RNWSTL
Trigger: CAATGTGGACCAATTTCTTCAAACTACGGCTTTTCT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTCCAAGTACTCTACCTaGGTAACATTGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHSKYST*VTLMTS
Trigger: GCTGGTCATCAATGTTACTCAGGTAGAGTACTTGGA...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAATCCAAGTACTCTACCTaGGTAACATTGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQSKYST*VTLMTS
Trigger: GCTGGTCATCAATGTTACTCAGGTAGAGTACTTGGA...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATTCAGAAATTCTTCCTaGACGGAAGAGACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPFRNSS*TEETLE
Trigger: TTCAAGAGTCTCTTCCGTTCAGGAAGAATTTCTGAA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTATATACTCCAACCCCTaGGAACATCCTCCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFIYSNP*EHPPKD
Trigger: ATCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATAT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTAGCTTCTTCCAAGCATaGGAGAATGGGTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFSFFQA*ENGCAF
Trigger: AAAGGCACACCCATTCTCTCATGCTTGGAAGAAGCT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTTCTCACAAGTTTAGCTaGAAAGAGATATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPSHKFS*KEIWTL
Trigger: GAGAGTCCATATCTCTTTTCAGCTAAACTTGTGAGA...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCTCTTGTCAAGTACCCTaGTTTACCAATCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTSCQVP*FTNLQT
Trigger: AGTTTGCAGATTGGTAAATCAGGGTACTTGACAAGA...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCAATAACCCAAGTACGTaGCAGCATGAGAAAGACGAT +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLNNPST*QHEKDD
Trigger: ATCGTCTTTCTCATGCTGTCACGTACTTGGGTTATT...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR GCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAACCATGGCCGACACCATaGTACCTTCACTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQPWPTP*YLHSLK
Trigger: TTTTAAAGAGTGAAGGTAGCATGGTGTCGGCCATGG...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGAGGTATTCAAACCATTaGCTGATTGTTGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMRYSNH*LIVESP
Trigger: TGGTGACTCAACAATCAGGCAATGGTTTGAATACCT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCTGCTATGCATGCAGATaGACTCAATTTCCTTTACCA +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTCYACR*TQFPLP
Trigger: TGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATACTTGTGCTATGCATaGAGATGCACTCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPYLCYA*RCTQFP
Trigger: AGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTAATTCCTGTCACCTaGGAGGAAACAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSLIPVT*EETNCP
Trigger: TGGACAGTTTGTTTCCTCCCAGGTGACAGGAATTAG...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGAGCAAGGGAGCTTCTTTaGTTTGAAGCAGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRARELL*FEAEPG
Trigger: CCCTGGTTCTGCTTCAAACCAAAGAAGCTCCCTTGC...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATATCCACCTTTGAAATaGGTAATTCTGCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPYPPLK*VILLLQ
Trigger: TTGCAGCAGCAGAATTACCCATTTCAAAGGTGGATA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCATATTGACACCACTCTaGAAGAAAGCACTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLILTPL*KKALSA
Trigger: TGCAGAGAGTGCTTTCTTCCAGAGTGGTGTCAATAT...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTACATCCTCCGAAGGATaGTGTCCAGCTGAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFTSSEG*CPAESC
Trigger: ACAACTTTCAGCTGGACACCATCCTTCGGAGGATGT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTTTAACCGCCAGAAGATaGATTACTTGTGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPLTARR*ITCAMH
Trigger: ATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAA...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCGTGTTTCTCACAGTGTaGAATACCACCATTGCATCA +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLVFLTV*NTTIAS
Trigger: TGATGCAATGGTGGTATTCCACACTGTGAGAAACAC...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGATTTGCACAATCAAGTaGCATCATTCCAAACCACTG +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMICTIK*HHSKPL
Trigger: CAGTGGTTTGGAATGATGCCACTTGATTGTGCAAAT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCTTCTGTTGTTTCCCTTaGGTGTTTATTTCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTFCCFP*VFISLY
Trigger: GTACAGGGAAATAAACACCCAAGGGAAACAACAGAA...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCTTCTGTTGTTTCCCTTaGGTGTTTATTTCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTFCCFP*VFISLY
Trigger: GTACAGGGAAATAAACACCCAAGGGAAACAACAGAA...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTAGCACTCAGGGGCTGTaGTCTCACCTTCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFSTQGL*SHLQMK
Trigger: TTTCATTTGAAGGTGAGACCACAGCCCCTGAGTGCT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATGAACTCAGGCAATTTTaGCCAGAGGTCCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHELRQF*PEVLIF
Trigger: AAAAATGAGGACCTCTGGTCAAAATTGCCTGAGTTC...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCATTCAGAAATTCTTCCTaGACGGAAGAGACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPFRNSS*TEETLE
Trigger: TTCAAGAGTCTCTTCCGTTCAGGAAGAATTTCTGAA...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAAAAGTTCCTGAGCCTTaGGATAGTTCTAGACTGTTA +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPKVPEP*DSSRLL
Trigger: TAACAGTCTAGAACTATCTCAAGGCTCAGGAACTTT...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAATCAGGGTCATTAAACTaGCGCATCTTAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKSGSLN*RILNFL
Trigger: CAGAAAGTTTAAGATGCGTCAGTTTAATGACCCTGA...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTAATTCAAACCATTGCCTaGTTGTTGAGTCACCAAATA +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLIQTIA*LLSHQI
Trigger: TATTTGGTGACTCAACAATCAGGCAATGGTTTGAAT...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGATTCAAACCATTGCCTaGTTGTTGAGTCACCAAATA +
Preference number: 4 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMIQTIA*LLSHQI
Trigger: TATTTGGTGACTCAACAATCAGGCAATGGTTTGAAT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAGTTCTCACTGATAAGTaGGAGCTAAATGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPVLTDK*ELNDEN
Trigger: GTTCTCATCATTTAGCTCTCACTTATCAGTGAGAAC...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAATCATCACTATTTCCTTaGACAGGGTCCAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQSSLFP*TGSRNR
Trigger: TCTGTTTCTGGACCCTGTTCAAGGAAATAGTGATGA...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTATCATGTGCCTTCACTaGCTAATTAAAGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPIMCLH*LIKGQE
Trigger: TTCTTGTCCTTTAATTAGTCAGTGAAGGCACATGAT...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR GCA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTAAAAATTCCATGTCTTTaGTTTTCTGAGCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLKIPCL*FSELQM
Trigger: CATCTGCAGCTCAGAAAAGCAAAGACATGGAATTTT...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTCACCACCATCAACACTaGAAGCAGACAGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTHHHQH*KQTAEK
Trigger: CTTTTCTGCTGTCTGCTTGCAGTGTTGATGGTGGTG...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAAGGTATTCAAACCATTaGCTGATTGTTGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPRYSNH*LIVESP
Trigger: TGGTGACTCAACAATCAGGCAATGGTTTGAATACCT...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCAGGTATTCAAACCATTaGCTGATTGTTGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLRYSNH*LIVESP
Trigger: TGGTGACTCAACAATCAGGCAATGGTTTGAATACCT...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAATGGGTGTGCCTTTTATaGCCAAATCAAGAAATACCA +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKWVCLL*PNQEIP
Trigger: TGGTATTTCTTGATTTGGGCATAAAAGGCACACCCA...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAACTAATTCCTGTCACCTaGGAGGAAACAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKLIPVT*EETNCP
Trigger: TGGACAGTTTGTTTCCTCCCAGGTGACAGGAATTAG...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCCTCCACCATACTTCTTaGGCTTTCTTTGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLLHHTS*AFFENP
Trigger: AGGATTTTCAAAGAAAGCCCAAGAAGTATGGTGGAG...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAATCCACTGGAGTTGACTaGCATTTTGATATTGACACC +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQSTGVD*HFDIDT
Trigger: GGTGTCAATATCAAAATGCCAGTCAACTCCAGTGGA...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTTTCTTTTATTCTCCTaGGAATCACAGTTACCCAAT +
Preference number: 4 (lower is better)
Translates to: TARRWITCAMHADALNFLFLLFS*ESQLPN
Trigger: ATTGGGTAACTGTGATTCCCAGGAGAATAAAAGAAA...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAATTAACCGCCAGAAGATaGATTACTTGTGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKLTARR*ITCAMH
Trigger: ATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAA...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGCAATCATCTCAGTTCTaGAATATGAGATTCACTACA +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQQSSQF*NMRFTT
Trigger: TGTAGTGAATCTCATATTCCAGAACTGAGATGATTG...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGCAAAATGAATCATACTaGAACACCAAAGGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQQNESY*NTKGLF
Trigger: AAACAGACCTTTGGTGTTCCAGTATGATTCATTTTG...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
3UTR CAA 72 bp AAGCTTTCTCTAGTTAACCGCCAGAAGATGGATTACTaGTGCTATGCATGCAGATGCACTCAATTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: KLSLVNRQKMDY*CYACRCTQFPL
Trigger: TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAACTAGAGAAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR TCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCAGAAAAGCCGTAGTTTaGAGAAATTGGTCCACATTG +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSRKAVV*RNWSTL
Trigger: CAATGTGGACCAATTTCTTCAAACTACGGCTTTTCT...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCGTCAGATACTACAAGTaGTCCTTAGGTACTGTAAAG +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSVRYYK*SLGTVK
Trigger: CTTTACAGTACCTAAGGATCACTTGTAGTATCTGAC...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAGTTCTCACTGATAAGTaGGAGCTAAATGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQVLTDK*ELNDEN
Trigger: GTTCTCATCATTTAGCTCTCACTTATCAGTGAGAAC...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACTGTTTTGCATTCGCTaGAGAAAGGTTACTTTTAGT +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPLFCIR*RKVTFS
Trigger: ACTAAAAGTAACCTTTCTTCAGCGAATGCAAAACAG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACTGAAACTTAATAACTaGATCCAGGAAGTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKLKLNN*IQEVSV
Trigger: AACTGACACTTCCTGGATTCAGTTATTAAGTTTCAG...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCTCTCAGACCTTGGCTaGAGGTCAAAACTTTATAAA +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHLSDLG*RSKLYK
Trigger: TTTATAAAGTTTTGACCTTCAGCCAAGGTCTGAGAG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477909.5
CDS-3UTR TCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCGTAGGGTCATTAAACTaGCGCATCTTAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSVGSLN*RILNFL
Trigger: CAGAAAGTTTAAGATGCGTCAGTTTAATGACCCTAC...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR GCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCAAAATTCCATGTCTTTaGTTTTCTGAGCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLKIPCL*FSELQM
Trigger: CATCTGCAGCTCAGAAAAGCAAAGACATGGAATTTT...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAGAGTCACCAAATAAATaGACCACTTTTCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPESPNK*TTFLCK
Trigger: CTTACAAAGAAAAGTGGTGCATTTATTTGGTGACTC...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAATGGGTGTGCCTTTTATaGCCAAATCAAGAAATACCA +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQWVCLL*PNQEIP
Trigger: TGGTATTTCTTGATTTGGGCATAAAAGGCACACCCA...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAATATCCACCTTTGAAATaGGTAATTCTGCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQYPPLK*VILLLQ
Trigger: TTGCAGCAGCAGAATTACCCATTTCAAAGGTGGATA...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTATCCACCTTTGAAATaGGTAATTCTGCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHYPPLK*VILLLQ
Trigger: TTGCAGCAGCAGAATTACCCATTTCAAAGGTGGATA...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCTATCCACCTTTGAAATaGGTAATTCTGCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSYPPLK*VILLLQ
Trigger: TTGCAGCAGCAGAATTACCCATTTCAAAGGTGGATA...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATCCACTGGAGTTGACTaGCATTTTGATATTGACACC +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKSTGVD*HFDIDT
Trigger: GGTGTCAATATCAAAATGCCAGTCAACTCCAGTGGA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTTCCACTGGAGTTGACTaGCATTTTGATATTGACACC +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFSTGVD*HFDIDT
Trigger: GGTGTCAATATCAAAATGCCAGTCAACTCCAGTGGA...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATTAAGAGTTCTACCATaGCTAAGTCAACATTGGATA +
Preference number: 4 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPLRVLP*LSQHWI
Trigger: TATCCAATGTTGACTTAGCCATGGTAGAACTCTTAA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAAGTGTTTCTCACAGTGTaGAATACCACCATTGCATCA +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKVFLTV*NTTIAS
Trigger: TGATGCAATGGTGGTATTCCACACTGTGAGAAACAC...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTGATAGTTGTTCAGAATaGCAAAATGAATCATACTGG +
Preference number: 4 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPDSCSE*QNESYW
Trigger: CCAGTATGATTCATTTTGCCATTCTGAACAACTATC...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGAGAACTCAGGCAATTTTaGCCAGAGGTCCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRELRQF*PEVLIF
Trigger: AAAAATGAGGACCTCTGGTCAAAATTGCCTGAGTTC...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATCAGGGTCATTAAACTaGCGCATCTTAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKSGSLN*RILNFL
Trigger: CAGAAAGTTTAAGATGCGTCAGTTTAATGACCCTGA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR TCA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAATTATTTATTGCACACTaGGGTGTCAAGAATCCTAAG +
Preference number: 4 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQLFIAH*GVKNPK
Trigger: CTTAGGATTCTTGACACCTCAGTGTGCAATAAATAA...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCGAGTCACCAAATAAATaGACCACTTTTCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLESPNK*TTFLCK
Trigger: CTTACAAAGAAAAGTGGTGCATTTATTTGGTGACTC...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAGAGTCACCAAATAAATaGACCACTTTTCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPESPNK*TTFLCK
Trigger: CTTACAAAGAAAAGTGGTGCATTTATTTGGTGACTC...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATGCTATGCATGCAGATaGACTCAATTTCCTTTACCA +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKCYACR*TQFPLP
Trigger: TGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR GCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATACTTGTGCTATGCATaGAGATGCACTCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKYLCYA*RCTQFP
Trigger: AGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGAATATTGACACCACTCTaGAAGAAAGCACTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRILTPL*KKALSA
Trigger: TGCAGAGAGTGCTTTCTTCCAGAGTGGTGTCAATAT...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTTCCACTGGAGTTGACTaGCATTTTGATATTGACACC +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTSTGVD*HFDIDT
Trigger: GGTGTCAATATCAAAATGCCAGTCAACTCCAGTGGA...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAATTAAGAGTTCTACCATaGCTAAGTCAACATTGGATA +
Preference number: 4 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKLRVLP*LSQHWI
Trigger: TATCCAATGTTGACTTAGCCATGGTAGAACTCTTAA...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTATTTGCACAATCAAGTaGCATCATTCCAAACCACTG +
Preference number: 4 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFICTIK*HHSKPL
Trigger: CAGTGGTTTGGAATGATGCCACTTGATTGTGCAAAT...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCCAATCATCTCAGTTCTaGAATATGAGATTCACTACA +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLQSSQF*NMRFTT
Trigger: TGTAGTGAATCTCATATTCCAGAACTGAGATGATTG...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCGATAGTTGTTCAGAATaGCAAAATGAATCATACTGG +
Preference number: 4 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLDSCSE*QNESYW
Trigger: CCAGTATGATTCATTTTGCCATTCTGAACAACTATC...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTTTCAGAAATTCTTCCTaGACGGAAGAGACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTFRNSS*TEETLE
Trigger: TTCAAGAGTCTCTTCCGTTCAGGAAGAATTTCTGAA...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGAAAAGTTCCTGAGCCTTaGGATAGTTCTAGACTGTTA +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRKVPEP*DSSRLL
Trigger: TAACAGTCTAGAACTATCTCAAGGCTCAGGAACTTT...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCTGTTTTGCATTCGCTaGAGAAAGGTTACTTTTAGT +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNLFCIR*RKVTFS
Trigger: ACTAAAAGTAACCTTTCTTCAGCGAATGCAAAACAG...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAAAAAATTCCATGTCTTTaGTTTTCTGAGCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKKIPCL*FSELQM
Trigger: CATCTGCAGCTCAGAAAAGCAAAGACATGGAATTTT...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR GCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTTGCTATGCATGCAGATaGACTCAATTTCCTTTACCA +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTCYACR*TQFPLP
Trigger: TGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAACAGCAAATGAACCACTaGACAAAACTGAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKQQMNH*TKLKGF
Trigger: AAATCCTTTCAGTTTTGTGCAGTGGTTCATTTGCTG...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGACTCCACCATACTTCTTaGGCTTTCTTTGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRLHHTS*AFFENP
Trigger: AGGATTTTCAAAGAAAGCCCAAGAAGTATGGTGGAG...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCTTTCTTTTATTCTCCTaGGAATCACAGTTACCCAAT +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSFLLFS*ESQLPN
Trigger: ATTGGGTAACTGTGATTCCCAGGAGAATAAAAGAAA...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTCTTTTATTCTCCTaGGAATCACAGTTACCCAAT +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHFLLFS*ESQLPN
Trigger: ATTGGGTAACTGTGATTCCCAGGAGAATAAAAGAAA...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTTTAACCGCCAGAAGATaGATTACTTGTGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTLTARR*ITCAMH
Trigger: ATGCATAGCACAAGTAATCCATCTTCTGGCGGTTAA...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCAGAAAGGCTTTATTATaGGTTCTGTCTGTCACAAAT +
Preference number: 4 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSRKALL*VLSVTN
Trigger: ATTTGTGACAGACAGAACCCATAATAAAGCCTTTCT...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCAAAATGAATCATACTaGAACACCAAAGGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHQNESY*NTKGLF
Trigger: AAACAGACCTTTGGTGTTCCAGTATGATTCATTTTG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTATTCAAACCATTGCCTaGTTGTTGAGTCACCAAATA +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTIQTIA*LLSHQI
Trigger: TATTTGGTGACTCAACAATCAGGCAATGGTTTGAAT...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR TCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGACTGAAACTTAATAACTaGATCCAGGAAGTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRLKLNN*IQEVSV
Trigger: AACTGACACTTCCTGGATTCAGTTATTAAGTTTCAG...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR GCA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTCAGCAAATGAACCACTaGACAAAACTGAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTQQMNH*TKLKGF
Trigger: AAATCCTTTCAGTTTTGTGCAGTGGTTCATTTGCTG...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACAGAAAGGCTTTATTATaGGTTCTGTCTGTCACAAAT +
Preference number: 4 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNRKALL*VLSVTN
Trigger: ATTTGTGACAGACAGAACCCATAATAAAGCCTTTCT...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CCA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTAAGAGTTCTACCATaGCTAAGTCAACATTGGATA +
Preference number: 4 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRLRVLP*LSQHWI
Trigger: TATCCAATGTTGACTTAGCCATGGTAGAACTCTTAA...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS CCA 90 bp CGGCGTGGAGGTCCGAACTGTACCGAGCTGTGGCGTTGCCGCAAGTaGAGGAAACTGAGGATGGAGATGCTCGCTCCCGGCCCCGCCCCG +
Preference number: 5 (lower is better)
Translates to: RRGGPNCTELWRCRK*RKLRMEMLAPGPAP
Trigger: CGGGGCGGGGCCGGGAGCGAGCATCTCCATCCTCAGTTTCCTCCACTTGCGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS CCA 90 bp AGGGCTCCAATTCTGCCTATGCCTTCGACCCGGGCCTCCCCTCCCTaGCACCTATGCCCACAGCCACGACTCCAGGGGCTGCACCTATCA +
Preference number: 5 (lower is better)
Translates to: RAPILPMPSTRASPP*HLCPQPRLQGLHLS
Trigger: TGATAGGTGCAGCCCCTGGAGTCGTGGCTGTGGGCATAGGTGCCAGGGAGGGGAGGCCCGGGTCGAAGGCATAGGCAGAATTGGAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS GCA 90 bp GTGCTCTTCACAAAGGGGACTGGGCCCACATCAGGAACCTGCCGGTaGAAGGCAGCCAGCAAGGAGTCCTCCTCCATGCGCTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VLFTKGTGPTSGTCR*KAASKESSSMRSWL
Trigger: CAGCCAGGAGCGCATGGAGGAGGACTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGGCCCAGTCCCCTTTGTGAAGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS GCA 90 bp GGGTCAGTGCTCTTCACAAAGGGGACTGGGCCCACATCAGGAACCTaGCGGTGCAAGGCAGCCAGCAAGGAGTCCTCCTCCATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GSVLFTKGTGPTSGT*RCKAASKESSSMRS
Trigger: GGAGCGCATGGAGGAGGACTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGGCCCAGTCCCCTTTGTGAAGAGCACTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS GCA 90 bp CTTTCGCTGCGGCGTGGAGGTCCGAACTGTACCGAGCTGTGGCGTTaGCGCAAGTGGAGGAAACTGAGGATGGAGATGCTCGCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: LSLRRGGPNCTELWR*RKWRKLRMEMLAPG
Trigger: GCCGGGAGCGAGCATCTCCATCCTCAGTTTCCTCCACTTGCGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCGCAGCGAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS GCA 90 bp CCGCACCGGGTTAGTGAAGGTGCCTGGAGGACAGAAGTCTTTCGCTaGGGCGTGGAGGTCCGAACTGTACCGAGCTGTGGCGTTGCCGCA +
Preference number: 5 (lower is better)
Translates to: PHRVSEGAWRTEVFR*GVEVRTVPSCGVAA
Trigger: TGCGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCGCAGCGAAAGACTTCTGTCCTCCAGGCACCTTCACTAACCCGGTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS CCA 90 bp GAGGCAGCTGGTGCCCAGAGCAGCGATGAGCCGAGAGATATGAGATaGGCAGGGAGGCGTCGCCAAGTGCTCCGCACCGGGTTAGTGAAG +
Preference number: 5 (lower is better)
Translates to: EAAGAQSSDEPRDMR*AGRRRQVLRTGLVK
Trigger: CTTCACTAACCCGGTGCGGAGCACTTGGCGACGCCTCCCTGCCCATCTCATATCTCTCGGCTCATCGCTGCTCTGGGCACCAGCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474165.5
ENST00000487830.1
ENST00000491511.6
ENST00000495842.5
CDS TCA 90 bp ATGTCCCCAAACGGCAGCTCAGTAAGGCCAGAACAGTCCACCGTGTaGCAGCAGCGCCAGCCAAGAGGCAGCTGGTGCCCAGAGCAGCGA +
Preference number: 5 (lower is better)
Translates to: MSPNGSSVRPEQSTV*QQRQPRGSWCPEQR
Trigger: TCGCTGCTCTGGGCACCAGCTGCCTCTTGGCTGGCGCTGCTGTCACACGGTGGACTGTTCTGGCCTTACTGAGCTGCCGTTTGGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474165.5
ENST00000487830.1
ENST00000491511.6
ENST00000495842.5
CDS CCA 90 bp AGGGAGGCGTCGCCAAGTGCTCCGCACCGGGTTAGTGAAGGTGCCTaGAGGACAGAAGTCTTTCGCTGCGGCGTGGAGGTCCGAACTGTA +
Preference number: 5 (lower is better)
Translates to: REASPSAPHRVSEGA*RTEVFRCGVEVRTV
Trigger: TACAGTTCGGACCTCCACGCCGCAGCGAAAGACTTCTGTCCTCCAGGCACCTTCACTAACCCGGTGCGGAGCACTTGGCGACGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS CCA 90 bp GGGTTAGTGAAGGTGCCTGGAGGACAGAAGTCTTTCGCTGCGGCGTaGAGGTCCGAACTGTACCGAGCTGTGGCGTTGCCGCAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: GLVKVPGGQKSFAAA*RSELYRAVALPQVE
Trigger: CTCCACTTGCGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCGCAGCGAAAGACTTCTGTCCTCCAGGCACCTTCACTAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS-3UTR CAA 90 bp GGCGTTGGCCGTCCGGATGACCACCACGGTCTTTGGGCTTCGATCGAGGAGCCGCCATGGCAGCGGTATTaGAGCAGGATGTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GVGRPDDHHGLWASIEEPPWQRY*SRMLCF
Trigger: GAAGCACAACATCCTGCTCAAATACCGCTGCCATGG...CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CAA 90 bp CGACGGATGTTCCTGAGCCGCCGGATGTACACTTCCAAAGGGAAGGTGCTGAAGCTCAGGTCCCAGCTCTaGGGCGTTGGCCGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: RRMFLSRRMYTSKGKVLKLRSQL*GVGRPD
Trigger: ATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAG...CTTCAGCACCTTCCCTTTGGAAGTGTACATCCGGCGGCTCAGGAACATCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS CCA 90 bp AGAAGTCTTTCGCTGCGGCGTGGAGGTCCGAACTGTACCGAGCTGTaGCGTTGCCGCAAGTGGAGGAAACTGAGGATGGAGATGCTCGCT +
Preference number: 5 (lower is better)
Translates to: RSLSLRRGGPNCTEL*RCRKWRKLRMEMLA
Trigger: AGCGAGCATCTCCATCCTCAGTTTCCTCCACTTGCGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCGCAGCGAAAGACTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS-3UTR CAA 90 bp TCCCGGACATTCCCCTCGAGGGCCGGCTCCAAGACCTGGACTGGAGCCGCAGGGGGAGGCTTATTTCTGTaGTTTCCCTTGGGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: SRTFPSRAGSKTWTGAAGGGLFL*FPLGVY
Trigger: ATAAACACCCAAGGGAAACAACAGAAATAAGCCTCC...CCCTGCGGCTCCAGTCCAGGTCTTGGAGCCGGCCCTCGAGGGGAATGTCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS CCA 90 bp GACAAAGTAGCTGGAAGAAGGGTCAGTGCTCTTCACAAAGGGGACTaGGCCCACATCAGGAACCTGCCGGTGCAAGGCAGCCAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: DKVAGRRVSALHKGD*AHIRNLPVQGSQQG
Trigger: TCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGGCCCAGTCCCCTTTGTGAAGAGCACTGACCCTTCTTCCAGCTACTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp AGGCTCACCTCAGGTCCCAGCTCTTGGGCGTTGGCCGTCCGGATGACCACCACGTCAGGTCCACTGGAGTaGACTGGCATTTTGATATTG +
Preference number: 5 (lower is better)
Translates to: RLTSGPSSWALAVRMTTTSGPLE*TGILIL
Trigger: CAATATCAAAATGCCAGTCAACTCCAGTGGACCTGA...CGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAGGTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CAA 90 bp GGCGTTGGCCGTCCGGATGACCACCACGGTCTTTGGGCTTCGATCGAGGAGCCGCTCGAACCAAGCACATaGGCCTTTTCAAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: GVGRPDDHHGLWASIEEPLEPST*AFSSNS
Trigger: TGAATTACTTGAAAAGGCCAATGTGCTTGGTTCGAG...CGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCCCAGCTCTTGGGCGTaGGCCGTCCGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTPSSWA*AVRMTT
Trigger: GGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCTCAGGTCCCAGCTCTaGGGCGTTGGCCGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTLRSQL*GVGRPD
Trigger: ATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCCCAGCTCTTGGGCGTaGGCCGTCCGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHPSSWA*AVRMTT
Trigger: GGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCGCACCCAGGCTGGTCTaGACCTTCCGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTAPRLV*TFRAQA
Trigger: TGCTTGAGCCCGGAAGGTCAAGACCAGCCTGGGTGC...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTGCACCCAGGCTGGTCTaGACCTTCCGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPAPRLV*TFRAQA
Trigger: TGCTTGAGCCCGGAAGGTCAAGACCAGCCTGGGTGC...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAACCCAGCTCTTGGGCGTaGGCCGTCCGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKPSSWA*AVRMTT
Trigger: GGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGG...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAACTCAGGTCCCAGCTCTaGGGCGTTGGCCGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQLRSQL*GVGRPD
Trigger: ATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAG...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCTCAGGTCCCAGCTCTaGGGCGTTGGCCGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHLRSQL*GVGRPD
Trigger: ATCCGGACGGCCAACGCCCAAGAGCTGGGACCTGAG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS CCA 90 bp AGACAGCAGAAAAGCCGTAGTTTGAAGAAATTGGTCCACATTGTCTaGCTGTGTCTTGTTCACCCATGGCCGACACCATGCTACCTTCAC +
Preference number: 5 (lower is better)
Translates to: RQQKSRSLKKLVHIV*LCLVHPWPTPCYLH
Trigger: GTGAAGGTAGCATGGTGTCGGCCATGGGTGAACAAGACACAGCCAGACAATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS CCA 90 bp TCCACCTTTGAAATGGGTAATTCTGCTGCTGCAAGGGAGCTTCTTTaGTTTGAAGCAGAACCAGGGCTCCCCAGTGTAGAGGTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: STFEMGNSAAARELL*FEAEPGLPSVEVCK
Trigger: TTTACAGACCTCTACACTGGGGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCCCTTGCAGCAGCAGAATTACCCATTTCAAAGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CCA 90 bp CTCTCTGCAGCGGTTAGGAGACCTTTCAGGTATCCACCTTTGAAATaGGTAATTCTGCTGCTGCAAGGGAGCTTCTTTGGTTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LSAAVRRPFRYPPLK*VILLLQGSFFGLKQ
Trigger: CTGCTTCAAACCAAAGAAGCTCCCTTGCAGCAGCAGAATTACCCATTTCAAAGGTGGATACCTGAAAGGTCTCCTAACCGCTGCAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CAGTCCCTTCCAAGACAGGCTAGGTTTCCAAGGGGCACACAAAGGACAAGAACACAGAAGATGGATTACTaGTGCTATGCATGCAGATGC +
Preference number: 5 (lower is better)
Translates to: QSLPRQARFPRGTQRTRTQKMDY*CYACRC
Trigger: GCATCTGCATGCATAGCACAAGTAATCCATCTTCTG...TGTTCTTGTCCTTTGTGTGCCCCTTGGAAACCTAGCCTGTCTTGGAAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CAA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTAAGGCAGAAGGATCCCTaGAGCCCAGGAAGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLRQKDP*SPGSQG
Trigger: GCCTTGACTTCCTGGGCTCAAGGGATCCTTCTGCCT...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS TCA 90 bp CCACCACCATCAACACTGCAAGCAGACAGCAGAAAAGCCGTAGTTTaGAGAAATTGGTCCACATTGTCTGGCTGTGTCTTGTTCACCCAT +
Preference number: 5 (lower is better)
Translates to: PPPSTLQADSRKAVV*RNWSTLSGCVLFTH
Trigger: ATGGGTGAACAAGACACAGCCAGACAATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCTGCTTGCAGTGTTGATGGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAATCTATACAATTCTTCTaGCTCCGGGACCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKSIQFF*LRDPPA
Trigger: GGCGGGCGGGTCCCGGAGCAAGAAGAATTGTATAGA...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CAA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATTGTCTGGCTGTGTCTaGTTCACCCATGGCCGACAC +
Preference number: 5 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPLSGCV*FTHGRH
Trigger: GTGTCGGCCATGGGTGAACAAGACACAGCCAGACAA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTTTGTCTGGCTGTGTCTaGTTCACCCATGGCCGACAC +
Preference number: 5 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPLSGCV*FTHGRH
Trigger: GTGTCGGCCATGGGTGAACAAGACACAGCCAGACAA...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAGGGAGCTTCTTTGGTTaGAAGCAGAACCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPGSFFG*KQNQGS
Trigger: GGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCCC...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAAGGCAGAAGGATCCCTaGAGCCCAGGAAGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPRQKDP*SPGSQG
Trigger: GCCTTGACTTCCTGGGCTCAAGGGATCCTTCTGCCT...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS TCA 90 bp CACCTGGGAGGAAACAAACTGTCCACTGCTGTCGATGAAAGTGGCTaGAACAGTCTCATGGTCCAAGTACTCTACCTGAGTAACATTGAT +
Preference number: 5 (lower is better)
Translates to: HLGGNKLSTAVDESG*NSLMVQVLYLSNID
Trigger: ATCAATGTTACTCAGGTAGAGTACTTGGACCATGAGACTGTTTCAGCCACTTTCATCGACAGCAGTGGACAGTTTGTTTCCTCCCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCCCATGGCAGCGGTATTaGAGCAGGATGTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTPWQRY*SRMLCF
Trigger: GAAGCACAACATCCTGCTCAAATACCGCTGCCATGG...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCCATGGCAGCGGTATTaGAGCAGGATGTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTPWQRY*SRMLCF
Trigger: GAAGCACAACATCCTGCTCAAATACCGCTGCCATGG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTTGTACCAGTCGCTGTaGAAAAGGCTCACCTCAGGT +
Preference number: 5 (lower is better)
Translates to: TARRWITCAMHADALNFLLYQSL*KRLTSG
Trigger: ACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAA...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp TCTCCCAGGCATCGACGAGATATACTCCAACCCCTGAGAACATCCTCCGAAGGATGTAACTCAGGTCAATaGAGAAGGTCATTGAATATG +
Preference number: 5 (lower is better)
Translates to: SPRHRRDILQPLRTSSEGCNSGQ*RRSLNM
Trigger: CATATTCAATGACCTTCTCAATTGACCTGAGTTACA...TCCTTCGGAGGATGTTCTCAGGGGTTGGAGTATATCTCGTCGATGCCTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616286.1
CDS-3UTR CAA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTCCAGGAAGACACACGTaGCACTCAGTAGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: TARRWITCAMHADALNFLPGRHT*HSVVSE
Trigger: TTCTGAAACTACTGAGTGCAACGTGTGTCTTCCTGG...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCGGGAGCTTCTTTGGTTaGAAGCAGAACCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSGSFFG*KQNQGS
Trigger: GGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCCC...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACCATGGCAGCGGTATTaGAGCAGGATGTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPPWQRY*SRMLCF
Trigger: GAAGCACAACATCCTGCTCAAATACCGCTGCCATGG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS TCA 90 bp CCCAGGAAGACACACGTTGCACTCAGTAGTTTCAGAAATTCTTCCTaGACGGAAGAGACTCTTGAAATAGACCCTGTCTGGTTTATCTTC +
Preference number: 5 (lower is better)
Translates to: PRKTHVALSSFRNSS*TEETLEIDPVWFIF
Trigger: GAAGATAAACCAGACAGGGTCTATTTCAAGAGTCTCTTCCGTTCAGGAAGAATTTCTGAAACTACTGAGTGCAACGTGTGTCTTCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGAGAAATTGGTCCACATaGTCTGGCTGTGTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQRNWST*SGCVLF
Trigger: GAACAAGACACAGCCAGACAATGTGGACCAATTTCT...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAAGGGACCCACATTCTaGGGACTACCCAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTKGPTF*GLPKLN
Trigger: GTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTT...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTTATTTGAGCAGGATGTaGTGCTTCTGGTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPYLSRM*CFWSTA
Trigger: TGCAGTGGACCAGAAGCACAACATCCTGCTCAAATA...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATATTTGAGCAGGATGTaGTGCTTCTGGTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPYLSRM*CFWSTA
Trigger: TGCAGTGGACCAGAAGCACAACATCCTGCTCAAATA...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAATTGTACCAGTCGCTGTaGAAAAGGCTCACCTCAGGT +
Preference number: 5 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKLYQSL*KRLTSG
Trigger: ACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAA...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp TTCAGTGCATTCACAAGAGCCTCTGACTATAAGCTTTCTCTAGTTAACCGCCAGCAGAAGATGGATTACTaGTGCTATGCATGCAGATGC +
Preference number: 5 (lower is better)
Translates to: FSAFTRASDYKLSLVNRQQKMDY*CYACRC
Trigger: GCATCTGCATGCATAGCACAAGTAATCCATCTTCTG...CTGGCGGTTAACTAGAGAAAGCTTATAGTCAGAGGCTCTTGTGAATGCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAAAGATCTCTTGTCTGTaGCCCAAGTGGGAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPKISCL*PKWECS
Trigger: ACTACACTCCCACTTGGGCAACAGACAAGAGATCTT...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAAGATCTCTTGTCTGTaGCCCAAGTGGGAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTKISCL*PKWECS
Trigger: ACTACACTCCCACTTGGGCAACAGACAAGAGATCTT...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTGTCATCACTATTTCCTaGAACAGGGTCCAGAAACAG +
Preference number: 5 (lower is better)
Translates to: TARRWITCAMHADALNFLVITIS*NRVQKQ
Trigger: CTGTTTCTGGACCCTGTTCAAGGAAATAGTGATGAC...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS CCA 90 bp TTGAAGAAATTGGTCCACATTGTCTGGCTGTGTCTTGTTCACCCATaGCCGACACCATGCTACCTTCACTCTTTAAAATTCCATGTCTTT +
Preference number: 5 (lower is better)
Translates to: LKKLVHIVWLCLVHP*PTPCYLHSLKFHVF
Trigger: AAAGACATGGAATTTTAAAGAGTGAAGGTAGCATGGTGTCGGCCATGGGTGAACAAGACACAGCCAGACAATGTGGACCAATTTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTGTCTGGCTGTGTCTaGTTCACCCATGGCCGACAC +
Preference number: 5 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRLSGCV*FTHGRH
Trigger: GTGTCGGCCATGGGTGAACAAGACACAGCCAGACAA...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCGTAGTTTGAAGAAATaGGTCCACATTGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTRSLKK*VHIVWL
Trigger: CAGCCAGACAATGTGGACCAATTTCTTCAAACTACG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTCTTCTTGGGCTTTCTTaGAAAATCCTGCACATGAAC +
Preference number: 5 (lower is better)
Translates to: TARRWITCAMHADALNFLLLGLS*KILHMN
Trigger: GTTCATGTGCAGGATTTTCAAAGAAAGCCCAAGAAG...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACCAGGAAGACACACGTaGCACTCAGTAGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPPGRHT*HSVVSE
Trigger: TTCTGAAACTACTGAGTGCAACGTGTGTCTTCCTGG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGAGGGAGCTTCTTTGGTTaGAAGCAGAACCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRGSFFG*KQNQGS
Trigger: GGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCCC...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGTCAGGTCCACTGGAGTaGACTGGCATTTTGATATTG +
Preference number: 5 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMSGPLE*TGILIL
Trigger: CAATATCAAAATGCCAGTCAACTCCAGTGGACCTGA...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTATCAGGTCCACTGGAGTaGACTGGCATTTTGATATTG +
Preference number: 5 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLSGPLE*TGILIL
Trigger: CAATATCAAAATGCCAGTCAACTCCAGTGGACCTGA...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCAAGGGACCCACATTCTaGGGACTACCCAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLKGPTF*GLPKLN
Trigger: GTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTT...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACAGAAGATGGATTACTaGTGCTATGCATGCAGATGC +
Preference number: 5 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLQKMDY*CYACRC
Trigger: GCATCTGCATGCATAGCACAAGTAATCCATCTTCTG...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCCAGAAGATGGATTACTaGTGCTATGCATGCAGATGC +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTQKMDY*CYACRC
Trigger: GCATCTGCATGCATAGCACAAGTAATCCATCTTCTG...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCACACCAAAGGTCTGTTTaGCATTCGCTGAAGAAAGGT +
Preference number: 5 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPHQRSV*HSLKKG
Trigger: ACCTTTCTTCAGCGAATGCAAAACAGACCTTTGGTG...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp GGGGCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTGTCATCACTATTTCCTaGAACAGGGTCCAGAAACAG +
Preference number: 5 (lower is better)
Translates to: GATFCNSGQLRRSLNMIPVITIS*NRVQKQ
Trigger: CTGTTTCTGGACCCTGTTCAAGGAAATAGTGATGAC...AGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp ACCGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTGAGCAGGACTCTTTTTaGGAAATTTTCCAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: TARRWITCAMHADALNFLEQDSF*EIFQEE
Trigger: CTCTTCTTGGAAAATTTCCAAAAAAGAGTCCTGCTC...AAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCAAGAAATTGGTCCACATaGTCTGGCTGTGTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPRNWST*SGCVLF
Trigger: GAACAAGACACAGCCAGACAATGTGGACCAATTTCT...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCACGTAGTTTGAAGAAATaGGTCCACATTGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPRSLKK*VHIVWL
Trigger: CAGCCAGACAATGTGGACCAATTTCTTCAAACTACG...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAACGGATACTTTAACTTaGCCTGGCCATAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPTDTLT*PGHSKV
Trigger: TACTTTGCTATGGCCAGGCAAAGTTAAAGTATCCGT...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCCAGGAAGACACACGTaGCACTCAGTAGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSPGRHT*HSVVSE
Trigger: TTCTGAAACTACTGAGTGCAACGTGTGTCTTCCTGG...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTTTGTACCAGTCGCTGTaGAAAAGGCTCACCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFLYQSL*KRLTSG
Trigger: ACCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAA...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCCACCAAAGGTCTGTTTaGCATTCGCTGAAGAAAGGT +
Preference number: 5 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLHQRSV*HSLKKG
Trigger: ACCTTTCTTCAGCGAATGCAAAACAGACCTTTGGTG...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS TCA 90 bp CTGCTAGTACCCTTAAGAGCTCTTATGCAGAGGAGAGACTGCAGTTaGTTCAAGAAGCACATTTTTCTTCAAAGAAATCCTATAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LLVPLRALMQRRDCS*FKKHIFLQRNPIVP
Trigger: TGGGACTATAGGATTTCTTTGAAGAAAAATGTGCTTCTTGAATCAACTGCAGTCTCTCCTCTGCATAAGAGCTCTTAAGGGTACTAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
ENST00000495842.5
CDS-3UTR CAA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCGAGGAGAGACTGCAGTaGATTCAAGAAGCACATTTT +
Preference number: 5 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLEERLQ*IQEAHF
Trigger: AAAATGTGCTTCTTGAATCAACTGCAGTCTCTCCTC...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATAGAAATTGGTCCACATaGTCTGGCTGTGTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHRNWST*SGCVLF
Trigger: GAACAAGACACAGCCAGACAATGTGGACCAATTTCT...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAATTCAGGTATCCACCTTaGAAATGGGTAATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKFRYPP*KWVILL
Trigger: CAGCAGAATTACCCATTTCAAAGGTGGATACCTGAA...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCATTCAGGTATCCACCTTaGAAATGGGTAATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPFRYPP*KWVILL
Trigger: CAGCAGAATTACCCATTTCAAAGGTGGATACCTGAA...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp ACAACAAACCCCCATGACGTAAGTTTACCTATGAAACAAACTGGCACATGTACCACTGGCATTTTGATATaGACACCACTCTGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: TTNPHDVSLPMKQTGTCTTGILI*TPLWKK
Trigger: TTTCTTCCAGAGTGGTGTCAATATCAAAATGCCAGT...GGTACATGTGCCAGTTTGTTTCATAGGTAAACTTACGTCATGGGGGTTTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGACTGGCATTTTGATATaGACACCACTCTGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMTGILI*TPLWKK
Trigger: TTTCTTCCAGAGTGGTGTCAATATCAAAATGCCAGT...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCAACTGGCATTTTGATATaGACACCACTCTGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: PLPDKLQTLYYQPNLSLPTGILI*TPLWKK
Trigger: TTTCTTCCAGAGTGGTGTCAATATCAAAATGCCAGT...TGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTCAGGTCCACTGGAGTaGACTGGCATTTTGATATTG +
Preference number: 5 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHSGPLE*TGILIL
Trigger: CAATATCAAAATGCCAGTCAACTCCAGTGGACCTGA...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAAAAGGGACCCACATTCTaGGGACTACCCAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKKGPTF*GLPKLN
Trigger: GTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTT...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCTACTACCAACCAAACTaGTCCCTTCCATCAAAACAT +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTYYQPN*SLPSKH
Trigger: ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTA...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CGCCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTATACTACCAACCAAACTaGTCCCTTCCATCAAAACAT +
Preference number: 5 (lower is better)
Translates to: RQKMDYLCYACRCTQFPLYYQPN*SLPSKH
Trigger: ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTA...TAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAGAAGATGGATTACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCTGTGTCACCAAATCTTaGAGAGCTATGTCACCAAAT +
Preference number: 5 (lower is better)
Translates to: PEDGLLVLCMQMHSISFTCVTKS*RAMSPN
Trigger: ATTTGGTGACATAGCTCTCAAAGATTTGGTGACACA...GGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTAATCCATCTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCGGAGGCTTATTTCTGTaGTTTCCCTTGGGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLGGLFL*FPLGVY
Trigger: ATAAACACCCAAGGGAAACAACAGAAATAAGCCTCC...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAAGAGCAGGACTCTTTTTaGGAAATTTTCCAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKEQDSF*EIFQEE
Trigger: CTCTTCTTGGAAAATTTCCAAAAAAGAGTCCTGCTC...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCGTAGTTTGAAGAAATaGGTCCACATTGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNRSLKK*VHIVWL
Trigger: CAGCCAGACAATGTGGACCAATTTCTTCAAACTACG...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATCTTCTTGGGCTTTCTTaGAAAATCCTGCACATGAAC +
Preference number: 5 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHLLGLS*KILHMN
Trigger: GTTCATGTGCAGGATTTTCAAAGAAAGCCCAAGAAG...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAACTTCTTGGGCTTTCTTaGAAAATCCTGCACATGAAC +
Preference number: 5 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQLLGLS*KILHMN
Trigger: GTTCATGTGCAGGATTTTCAAAGAAAGCCCAAGAAG...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTCAGGTATCCACCTTaGAAATGGGTAATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHFRYPP*KWVILL
Trigger: CAGCAGAATTACCCATTTCAAAGGTGGATACCTGAA...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp TGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAAACACTCACTGGCATTTTGATATaGACACCACTCTGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: CYACRCTQFPLPDKLQTLTGILI*TPLWKK
Trigger: TTTCTTCCAGAGTGGTGTCAATATCAAAATGCCAGT...GAGTGTTTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp TTCTGTCTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGAAAGGGACCCACATTCTaGGGACTACCCAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: FCLSQIASNQSSQFWNMRKGPTF*GLPKLN
Trigger: GTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTT...TCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAGACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CTGTCACAAATAGCATCAAATCAATCATCTCAGTTCTGGAATATGAGATTCACTTATTTGAGCAGGATGTaGTGCTTCTGGTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: LSQIASNQSSQFWNMRFTYLSRM*CFWSTA
Trigger: TGCAGTGGACCAGAAGCACAACATCCTGCTCAAATA...AGTGAATCTCATATTCCAGAACTGAGATGATTGATTTGATGCTATTTGTGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp AGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACCACTGGAGGAGCAATGTGTAACTCAGGTCAATaGAGAAGGTCATTGAATATG +
Preference number: 5 (lower is better)
Translates to: RNHLHNQVASFQTTGGAMCNSGQ*RRSLNM
Trigger: CATATTCAATGACCTTCTCAATTGACCTGAGTTACA...CATTGCTCCTCCAGTGGTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp GCCACTTTCTGTAACTCAGGTCAATTGAGAAGGTCATTGAATATGATTCCTCCATGTGTCACCAAATCTTaGAGAGCTATGTCACCAAAT +
Preference number: 5 (lower is better)
Translates to: ATFCNSGQLRRSLNMIPPCVTKS*RAMSPN
Trigger: ATTTGGTGACATAGCTCTCAAAGATTTGGTGACACA...TGGAGGAATCATATTCAATGACCTTCTCAATTGACCTGAGTTACAGAAAGTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAAACGATCAGTTTCCTTTaGAGGTTACATGATAAGCAG +
Preference number: 5 (lower is better)
Translates to: PDKLQTLYYQPNLSLPSKTISFL*RLHDKQ
Trigger: CTGCTTATCATGTAACCTCAAAAGGAAACTGATCGT...TTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273347.10
CDS-3UTR CAA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCGAGCAGGACTCTTTTTaGGAAATTTTCCAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSEQDSF*EIFQEE
Trigger: CTCTTCTTGGAAAATTTCCAAAAAAGAGTCCTGCTC...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCAGAAAAGCCGTAGTTaGAAGAAATTGGTCCACATT +
Preference number: 5 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSQKSRS*KKLVHI
Trigger: AATGTGGACCAATTTCTTCAAACTACGGCTTTTCTG...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAACAGAAAAGCCGTAGTTaGAAGAAATTGGTCCACATT +
Preference number: 5 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQQKSRS*KKLVHI
Trigger: AATGTGGACCAATTTCTTCAAACTACGGCTTTTCTG...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAAACGGATACTTTAACTTaGCCTGGCCATAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKTDTLT*PGHSKV
Trigger: TACTTTGCTATGGCCAGGCAAAGTTAAAGTATCCGT...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS-3UTR CAA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACACGGATACTTTAACTTaGCCTGGCCATAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNTDTLT*PGHSKV
Trigger: TACTTTGCTATGGCCAGGCAAAGTTAAAGTATCCGT...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273347.10
ENST00000491511.6
CDS-3UTR CAA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTTTCAGGTATCCACCTTaGAAATGGGTAATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFFRYPP*KWVILL
Trigger: CAGCAGAATTACCCATTTCAAAGGTGGATACCTGAA...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp GATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTACTACCAACCAAACTaGTCCCTTCCATCAAAACAT +
Preference number: 5 (lower is better)
Translates to: DKLQTLYYQPNLSLPSKHYYQPN*SLPSKH
Trigger: ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTA...ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp AGCTACAAACACTCTACTACCAACCAAACTTGTCCCTTCCATCAAAACATTTTTCTCGAACCAAGCACATaGGCCTTTTCAAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: SYKHSTTNQTCPFHQNIFLEPST*AFSSNS
Trigger: TGAATTACTTGAAAAGGCCAATGTGCTTGGTTCGAG...AAAAATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAACTCGAACCAAGCACATaGGCCTTTTCAAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKLEPST*AFSSNS
Trigger: TGAATTACTTGAAAAGGCCAATGTGCTTGGTTCGAG...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp TACTTGTGCTATGCATGCAGATGCACTCAATTTCCTTTACCAGATAAGCTACAATGTAACTCAGGTCAATaGAGAAGGTCATTGAATATG +
Preference number: 5 (lower is better)
Translates to: YLCYACRCTQFPLPDKLQCNSGQ*RRSLNM
Trigger: CATATTCAATGACCTTCTCAATTGACCTGAGTTACA...TTGTAGCTTATCTGGTAAAGGAAATTGAGTGCATCTGCATGCATAGCACAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CAATTTCCTTTACCAGATAAGCTACAAACACTCTACTACCAACCAAACTTGTCCTGTAACTCAGGTCAATaGAGAAGGTCATTGAATATG +
Preference number: 5 (lower is better)
Translates to: QFPLPDKLQTLYYQPNLSCNSGQ*RRSLNM
Trigger: CATATTCAATGACCTTCTCAATTGACCTGAGTTACA...GGACAAGTTTGGTTGGTAGTAGAGTGTTTGTAGCTTATCTGGTAAAGGAAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp CCAAGCACATTGGCCTTTTCAAGTAATTCAGAAAAGGTAGATCATCAAGAGAAATACTACCAACCAAACTaGTCCCTTCCATCAAAACAT +
Preference number: 5 (lower is better)
Translates to: PSTLAFSSNSEKVDHQEKYYQPN*SLPSKH
Trigger: ATGTTTTGATGGAAGGGACAAGTTTGGTTGGTAGTA...TTTCTCTTGATGATCTACCTTTTCTGAATTACTTGAAAAGGCCAATGTGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS-3UTR CAA 90 bp ACCAGACAAGATCATAAGAAATCATTTGCACAATCAAGTGGCATCATTCCAAACTCTATACAATTCTTCTaGCTGAATCTGATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: TRQDHKKSFAQSSGIIPNSIQFF*LNLMSP
Trigger: TGGGGACATCAGATTCAGCAAGAAGAATTGTATAGA...GTTTGGAATGATGCCACTTGATTGTGCAAATGATTTCTTATGATCTTGTCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS CCA 72 bp GGTGCCCAGAGCAGCGATGAGCCGAGAGATATGAGATaGGCAGGGAGGCGTCGCCAAGTGCTCCGCACCGGG +
Preference number: 6 (lower is better)
Translates to: GAQSSDEPRDMR*AGRRRQVLRTG
Trigger: CCCGGTGCGGAGCACTTGGCGACGCCTCCCTGCCCATCTCATATCTCTCGGCTCATCGCTGCTCTGGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474165.5
ENST00000487830.1
ENST00000491511.6
ENST00000495842.5
CDS CCA 72 bp ATTCTGCCTATGCCTTCGACCCGGGCCTCCCCTCCCTaGCACCTATGCCCACAGCCACGACTCCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: ILPMPSTRASPP*HLCPQPRLQGL
Trigger: CAGCCCCTGGAGTCGTGGCTGTGGGCATAGGTGCCAGGGAGGGGAGGCCCGGGTCGAAGGCATAGGCAGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491511.6
CDS TCA 72 bp CAGCTGGTGCCCAGAGCAGCGATGAGCCGAGAGATATaGGATGGGCAGGGAGGCGTCGCCAAGTGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: QLVPRAAMSREI*DGQGGVAKCSA
Trigger: TGCGGAGCACTTGGCGACGCCTCCCTGCCCATCTCATATCTCTCGGCTCATCGCTGCTCTGGGCACCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474165.5
ENST00000487830.1
ENST00000491511.6
ENST00000495842.5
CDS GCA 72 bp ACAAAGGGGACTGGGCCCACATCAGGAACCTGCCGGTaGAAGGCAGCCAGCAAGGAGTCCTCCTCCATGCGC +
Preference number: 6 (lower is better)
Translates to: TKGTGPTSGTCR*KAASKESSSMR
Trigger: GCGCATGGAGGAGGACTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGGCCCAGTCCCCTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS GCA 72 bp CGACGCTTTGGCAACCCAGGGCTCCAATTCTGCCTATaGCTTCGACCCGGGCCTCCCCTCCCTGGCACCTAT +
Preference number: 6 (lower is better)
Translates to: RRFGNPGLQFCL*LRPGPPLPGTY
Trigger: ATAGGTGCCAGGGAGGGGAGGCCCGGGTCGAAGGCATAGGCAGAATTGGAGCCCTGGGTTGCCAAAGCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS CAA 90 bp TCTTTCGCTGCGGCGTGGAGGTCCGAACTGTACCGAGCTGTGGCGTaGCCGCAAGTGGAGGAAACTGAGGATGGAGATGCTCGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SFAAAWRSELYRAVA*PQVEETEDGDARSR
Trigger: CCGGGAGCGAGCATCTCCATCCTCAGTTTCCTCCACTTGCGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCGCAGCGAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS TCA 72 bp AACGGCAGCTCAGTAAGGCCAGAACAGTCCACCGTGTaGCAGCAGCGCCAGCCAAGAGGCAGCTGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: NGSSVRPEQSTV*QQRQPRGSWCP
Trigger: TGGGCACCAGCTGCCTCTTGGCTGGCGCTGCTGTCACACGGTGGACTGTTCTGGCCTTACTGAGCTGCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474165.5
ENST00000487830.1
ENST00000491511.6
ENST00000495842.5
CDS GCA 72 bp CTCTTCACAAAGGGGACTGGGCCCACATCAGGAACCTaGCGGTGCAAGGCAGCCAGCAAGGAGTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LFTKGTGPTSGT*RCKAASKESSS
Trigger: GGAGGAGGACTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGGCCCAGTCCCCTTTGTGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CCA 72 bp GGTCCGAACTGTACCGAGCTGTGGCGTTGCCGCAAGTaGAGGAAACTGAGGATGGAGATGCTCGCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: GPNCTELWRCRK*RKLRMEMLAPG
Trigger: GCCGGGAGCGAGCATCTCCATCCTCAGTTTCCTCCACTTGCGGCAACGCCACAGCTCGGTACAGTTCGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS CCA 72 bp TCGCTGCGGCGTGGAGGTCCGAACTGTACCGAGCTGTaGCGTTGCCGCAAGTGGAGGAAACTGAGGATGGAG +
Preference number: 6 (lower is better)
Translates to: SLRRGGPNCTEL*RCRKWRKLRME
Trigger: CTCCATCCTCAGTTTCCTCCACTTGCGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCGCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS CCA 72 bp AAGGTGCCTGGAGGACAGAAGTCTTTCGCTGCGGCGTaGAGGTCCGAACTGTACCGAGCTGTGGCGTTGCCG +
Preference number: 6 (lower is better)
Translates to: KVPGGQKSFAAA*RSELYRAVALP
Trigger: CGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCGCAGCGAAAGACTTCTGTCCTCCAGGCACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS GCA 72 bp CGGCGTGGAGGTCCGAACTGTACCGAGCTGTGGCGTTaGCGCAAGTGGAGGAAACTGAGGATGGAGATGCTC +
Preference number: 6 (lower is better)
Translates to: RRGGPNCTELWR*RKWRKLRMEML
Trigger: GAGCATCTCCATCCTCAGTTTCCTCCACTTGCGGCAACGCCACAGCTCGGTACAGTTCGGACCTCCACGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS GCA 72 bp GTTAGTGAAGGTGCCTGGAGGACAGAAGTCTTTCGCTaGGGCGTGGAGGTCCGAACTGTACCGAGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: VSEGAWRTEVFR*GVEVRTVPSCG
Trigger: GCCACAGCTCGGTACAGTTCGGACCTCCACGCCGCAGCGAAAGACTTCTGTCCTCCAGGCACCTTCACTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487830.1
ENST00000491511.6
CDS CCA 72 bp CAGCCAGCAAGGAGTCCTCCTCCATGCGCTCCTGGCTaGACAGGGTCTGCTGATCATAGCCACAGTAGGGAT +
Preference number: 6 (lower is better)
Translates to: QPARSPPPCAPG*TGSADHSHSRD
Trigger: ATCCCTACTGTGGCTATGATCAGCAGACCCTGTCCAGCCAGGAGCGCATGGAGGAGGACTCCTTGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CCA 72 bp GAAATGGGTAATTCTGCTGCTGCAAGGGAGCTTCTTTaGTTTGAAGCAGAACCAGGGCTCCCCAGTGTAGAG +
Preference number: 6 (lower is better)
Translates to: EMGNSAAARELL*FEAEPGLPSVE
Trigger: CTCTACACTGGGGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCCCTTGCAGCAGCAGAATTACCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS CAA 90 bp AATTCTGGCCTGCAGGTAGTCTCCACCATACTTCTTGGGCTTTCTTaGAAAATCCTGCACATGAACCAGCACCTCAAGCTGGCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: NSGLQVVSTILLGLS*KILHMNQHLKLASH
Trigger: GTGGGAAGCCAGCTTGAGGTGCTGGTTCATGTGCAGGATTTTCAAAGAAAGCCCAAGAAGTATGGTGGAGACTACCTGCAGGCCAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CAA 72 bp TCTGCAGCGGTTAGGAGACCTTTCAGGTATCCACCTTaGAAATGGGTAATTCTGCTGCTGCAAGGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: SAAVRRPFRYPP*KWVILLLQGSF
Trigger: GAAGCTCCCTTGCAGCAGCAGAATTACCCATTTCAAAGGTGGATACCTGAAAGGTCTCCTAACCGCTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS TCA 72 bp TGTCTGGTTTATCTTCCTGTAAGCGCTGAAGAACTCTaGTCCCTTCACTGGGGTGGACCAGAGATACGGATA +
Preference number: 6 (lower is better)
Translates to: CLVYLPVSAEEL*SLHWGGPEIRI
Trigger: TATCCGTATCTCTGGTCCACCCCAGTGAAGGGATCAGAGTTCTTCAGCGCTTACAGGAAGATAAACCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CCA 72 bp GCGGTTAGGAGACCTTTCAGGTATCCACCTTTGAAATaGGTAATTCTGCTGCTGCAAGGGAGCTTCTTTGGT +
Preference number: 6 (lower is better)
Translates to: AVRRPFRYPPLK*VILLLQGSFFG
Trigger: ACCAAAGAAGCTCCCTTGCAGCAGCAGAATTACCCATTTCAAAGGTGGATACCTGAAAGGTCTCCTAACCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS CAA 72 bp CTGCAGGTAGTCTCCACCATACTTCTTGGGCTTTCTTaGAAAATCCTGCACATGAACCAGCACCTCAAGCTG +
Preference number: 6 (lower is better)
Translates to: LQVVSTILLGLS*KILHMNQHLKL
Trigger: CAGCTTGAGGTGCTGGTTCATGTGCAGGATTTTCAAAGAAAGCCCAAGAAGTATGGTGGAGACTACCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CAA 72 bp TGCTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTaGGGACTACCCAAGTTAAACTCCACTAAATCTGGA +
Preference number: 6 (lower is better)
Translates to: CFWSTARKGPTF*GLPKLNSTKSG
Trigger: TCCAGATTTAGTGGAGTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS CAA 90 bp ATCAACACTGCAAGCAGACAGCAGAAAAGCCGTAGTTTGAAGAAATaGGTCCACATTGTCTGGCTGTGTCTTGTTCACCCATGGCCGACA +
Preference number: 6 (lower is better)
Translates to: INTASRQQKSRSLKK*VHIVWLCLVHPWPT
Trigger: TGTCGGCCATGGGTGAACAAGACACAGCCAGACAATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCTGCTTGCAGTGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS CAA 90 bp ACCACCACCATCAACACTGCAAGCAGACAGCAGAAAAGCCGTAGTTaGAAGAAATTGGTCCACATTGTCTGGCTGTGTCTTGTTCACCCA +
Preference number: 6 (lower is better)
Translates to: TTTINTASRQQKSRS*KKLVHIVWLCLVHP
Trigger: TGGGTGAACAAGACACAGCCAGACAATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCTGCTTGCAGTGTTGATGGTGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS CAA 90 bp AAAGCACTCTCTGCAGCGGTTAGGAGACCTTTCAGGTATCCACCTTaGAAATGGGTAATTCTGCTGCTGCAAGGGAGCTTCTTTGGTTTG +
Preference number: 6 (lower is better)
Translates to: KALSAAVRRPFRYPP*KWVILLLQGSFFGL
Trigger: CAAACCAAAGAAGCTCCCTTGCAGCAGCAGAATTACCCATTTCAAAGGTGGATACCTGAAAGGTCTCCTAACCGCTGCAGAGAGTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS CAA 90 bp AGGTCTGTAAAGTTACACAGGGGCAGATTCCCAGGAAGACACACGTaGCACTCAGTAGTTTCAGAAATTCTTCCTGAACGGAAGAGACTC +
Preference number: 6 (lower is better)
Translates to: RSVKLHRGRFPGRHT*HSVVSEILPERKRL
Trigger: GAGTCTCTTCCGTTCAGGAAGAATTTCTGAAACTACTGAGTGCAACGTGTGTCTTCCTGGGAATCTGCCCCTGTGTAACTTTACAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS TCA 72 bp GGAAACAAACTGTCCACTGCTGTCGATGAAAGTGGCTaGAACAGTCTCATGGTCCAAGTACTCTACCTGAGT +
Preference number: 6 (lower is better)
Translates to: GNKLSTAVDESG*NSLMVQVLYLS
Trigger: ACTCAGGTAGAGTACTTGGACCATGAGACTGTTTCAGCCACTTTCATCGACAGCAGTGGACAGTTTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS GCA 72 bp GTCTGGCTGTGTCTTGTTCACCCATGGCCGACACCATaGTACCTTCACTCTTTAAAATTCCATGTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: VWLCLVHPWPTP*YLHSLKFHVFA
Trigger: AGCAAAGACATGGAATTTTAAAGAGTGAAGGTAGCATGGTGTCGGCCATGGGTGAACAAGACACAGCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
ENST00000495842.5
CDS CCA 72 bp TTGGTCCACATTGTCTGGCTGTGTCTTGTTCACCCATaGCCGACACCATGCTACCTTCACTCTTTAAAATTC +
Preference number: 6 (lower is better)
Translates to: LVHIVWLCLVHP*PTPCYLHSLKF
Trigger: GAATTTTAAAGAGTGAAGGTAGCATGGTGTCGGCCATGGGTGAACAAGACACAGCCAGACAATGTGGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS CCA 72 bp GAATTCTGGCCTGCAGGTAGTCTCCACCATACTTCTTaGGCTTTCTTTGAAAATCCTGCACATGAACCAGCA +
Preference number: 6 (lower is better)
Translates to: EFWPAGSLHHTS*AFFENPAHEPA
Trigger: TGCTGGTTCATGTGCAGGATTTTCAAAGAAAGCCCAAGAAGTATGGTGGAGACTACCTGCAGGCCAGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CAA 72 bp GCAAGCAGACAGCAGAAAAGCCGTAGTTTGAAGAAATaGGTCCACATTGTCTGGCTGTGTCTTGTTCACCCA +
Preference number: 6 (lower is better)
Translates to: ASRQQKSRSLKK*VHIVWLCLVHP
Trigger: TGGGTGAACAAGACACAGCCAGACAATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCTGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS CAA 72 bp AAGTTACACAGGGGCAGATTCCCAGGAAGACACACGTaGCACTCAGTAGTTTCAGAAATTCTTCCTGAACGG +
Preference number: 6 (lower is better)
Translates to: KLHRGRFPGRHT*HSVVSEILPER
Trigger: CCGTTCAGGAAGAATTTCTGAAACTACTGAGTGCAACGTGTGTCTTCCTGGGAATCTGCCCCTGTGTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CAA 72 bp CTGGGAATCACAGTTACCCAATCAGGTCCACTGGAGTaGACTGGCATTTTGATATTGACACCACTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: LGITVTQSGPLE*TGILILTPLWK
Trigger: CTTCCAGAGTGGTGTCAATATCAAAATGCCAGTCAACTCCAGTGGACCTGATTGGGTAACTGTGATTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS CAA 90 bp AGGATGTTGTGCTTCTGGTCCACTGCAAGGAAGGGACCCACATTCTaGGGACTACCCAAGTTAAACTCCACTAAATCTGGAACAAATGTA +
Preference number: 6 (lower is better)
Translates to: RMLCFWSTARKGPTF*GLPKLNSTKSGTNV
Trigger: TACATTTGTTCCAGATTTAGTGGAGTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCAGAAGCACAACATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS TCA 72 bp TCAACACTGCAAGCAGACAGCAGAAAAGCCGTAGTTTaGAGAAATTGGTCCACATTGTCTGGCTGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: STLQADSRKAVV*RNWSTLSGCVL
Trigger: CAAGACACAGCCAGACAATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCTGCTTGCAGTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS TCA 72 bp ACACACGTTGCACTCAGTAGTTTCAGAAATTCTTCCTaGACGGAAGAGACTCTTGAAATAGACCCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: THVALSSFRNSS*TEETLEIDPVW
Trigger: CCAGACAGGGTCTATTTCAAGAGTCTCTTCCGTTCAGGAAGAATTTCTGAAACTACTGAGTGCAACGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS TCA 72 bp TGTAAGCACTCTGTAATGTTGTCAGGGTCATTAAACTaGCGCATCTTAAACTTTCTGGGCCTCCACTGGTCT +
Preference number: 6 (lower is better)
Translates to: CKHSVMLSGSLN*RILNFLGLHWS
Trigger: AGACCAGTGGAGGCCCAGAAAGTTTAAGATGCGTCAGTTTAATGACCCTGACAACATTACAGAGTGCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
CDS CCA 72 bp AATCACAGTTACCCAATCAGGTCCACTGGAGTTGACTaGCATTTTGATATTGACACCACTCTGGAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: NHSYPIRSTGVD*HFDIDTTLEES
Trigger: GCTTTCTTCCAGAGTGGTGTCAATATCAAAATGCCAGTCAACTCCAGTGGACCTGATTGGGTAACTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1
CDS CAA 72 bp ATCAACACTGCAAGCAGACAGCAGAAAAGCCGTAGTTaGAAGAAATTGGTCCACATTGTCTGGCTGTGTCTT +
Preference number: 6 (lower is better)
Translates to: INTASRQQKSRS*KKLVHIVWLCL
Trigger: AAGACACAGCCAGACAATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCTGCTTGCAGTGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
CDS CAA 90 bp CCTGCTAGTACCCTTAAGAGCTCTTATGCAGAGGAGAGACTGCAGTaGATTCAAGAAGCACATTTTTCTTCAAAGAAATCCTATAGTCCC +
Preference number: 6 (lower is better)
Translates to: PASTLKSSYAEERLQ*IQEAHFSSKKSYSP
Trigger: GGGACTATAGGATTTCTTTGAAGAAAAATGTGCTTCTTGAATCAACTGCAGTCTCTCCTCTGCATAAGAGCTCTTAAGGGTACTAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000491511.6
ENST00000495842.5
CDS TCA 72 bp GAAGTTACGTCTAACTTTCCTTCCAGCATGAAATTCTaGACTCAGGCAATTTTGACCAGAGGTCCTCATTTT +
Preference number: 6 (lower is better)
Translates to: EVTSNFPSSMKF*TQAILTRGPHF
Trigger: AAAATGAGGACCTCTGGTCAAAATTGCCTGAGTTCAGAATTTCATGCTGGAAGGAAAGTTAGACGTAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273347.10
ENST00000474165.5
ENST00000477909.5
ENST00000487830.1
ENST00000491511.6
ENST00000495842.5
CDS GCA 72 bp TCAAACCATTGCCTGATTGTTGAGTCACCAAATAAATaGACCACTTTTCTTTGTAAGCACTCTGTAATGTTG +
Preference number: 6 (lower is better)
Translates to: SNHCLIVESPNK*TTFLCKHSVML
Trigger: CAACATTACAGAGTGCTTACAAAGAAAAGTGGTGCATTTATTTGGTGACTCAACAATCAGGCAATGGTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273347.10
ENST00000477909.5
ENST00000491511.6
ENST00000616286.1