Pregenerated sensors for NXNL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000130045Ensembl transcript IDs: ENST00000375854.7, ENST00000375855.3, ENST00000478686.1, ENST00000487646.2, ENST00000618633.1, ENST00000649870.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCCTTTTCCTTTCTTTCGGGTATATACCCAGCAGCAGGATTGCTaGGTCACATGGTCACAGCACATTGTTAATGAGCACAGACTCGCA | + |
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Preference number: 1 (lower is better) Translates to: LPFPFFRVYTQQQDC*VTWSQHIVNEHRLA Trigger: TGCGAGTCTGTGCTCATTAACAATGTGCTGTGACCATGTGACTCAGCAATCCTGCTGCTGGGTATATACCCGAAAGAAAGGAAAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR CCA 90 bp | CAGTGCTGCAATAAACATGGGGGTGCAGATACCTCTTCAATATACTaGCTTCCTTTTCCTTTCTTTCGGGTATATACCCAGCAGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: QCCNKHGGADTSSIY*LPFPFFRVYTQQQD Trigger: ATCCTGCTGCTGGGTATATACCCGAAAGAAAGGAAAAGGAAGCCAGTATATTGAAGAGGTATCTGCACCCCCATGTTTATTGCAGCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR CAA 90 bp | TATATACCCAGCAGCAGGATTGCTGAGTCACATGGTCACAGCACATaGTTAATGAGCACAGACTCGCAGAATGCAGGACACGGATGGTGC | + |
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Preference number: 2 (lower is better) Translates to: YIPSSRIAESHGHST*LMSTDSQNAGHGWC Trigger: GCACCATCCGTGTCCTGCATTCTGCGAGTCTGTGCTCATTAACAATGTGCTGTGACCATGTGACTCAGCAATCCTGCTGCTGGGTATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATCACAGACTCGCAGAATaGAGGACACGGATGGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: SGNQPSTLYVQEFNCFDHHRLAE*RTRMVR Trigger: CCGCACCATCCGTGTCCTGCATTCTGCGAGTCTGTG...ATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGGTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATATAAGTGAGAACATGTaGTGTTTGTCTTTCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SGNQPSTLYVQEFNCFDHISENM*CLSFCA Trigger: GGCACAGAAAGACAAACATCACATGTTCTCACTTAT...ATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTACCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAGCTTCTGGTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTACCTCTTCAATATACTaGCTTCCTTTTCCTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: FPASGNQPSTLYVQEFNCTSSIY*LPFPFF Trigger: AAAGAAAGGAAAAGGAAGCCAGTATATTGAAGAGGT...ACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTACCAGAAGCTGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR TCA 72 bp | CCTTTCTTTCGGGTATATACCCAGCAGCAGGATTGCTaGGTCACATGGTCACAGCACATTGTTAATGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: PFFRVYTQQQDC*VTWSQHIVNEH Trigger: GTGCTCATTAACAATGTGCTGTGACCATGTGACTCAGCAATCCTGCTGCTGGGTATATACCCGAAAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR GCA 72 bp | CTTAGGTTGCTTCCAAATCTTGGCTGTTGTGAACAGTaGTGCAATAAACATGGGGGTGCAGATACCTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: LRLLPNLGCCEQ*CNKHGGADTSS Trigger: TGAAGAGGTATCTGCACCCCCATGTTTATTGCAGCACTGTTCACAACAGCCAAGATTTGGAAGCAACCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGCCTGGCTTATTTCACTTCACATAAGGGCCTCCTTTTCCATCTATATTATTTACCCAGCAGCAGGATaGCTGAGTCACATGGTCACA | + |
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Preference number: 3 (lower is better) Translates to: CAWLISLHIRASFSIYIIYPAAG*LSHMVT Trigger: TGTGACCATGTGACTCAGCAATCCTGCTGCTGGGTA...AATAATATAGATGGAAAAGGAGGCCCTTATGTGAAGTGAAATAAGCCAGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR GCA 72 bp | AGGTTGCTTCCAAATCTTGGCTGTTGTGAACAGTGCTaGAATAAACATGGGGGTGCAGATACCTCTTCAATA | + |
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Preference number: 3 (lower is better) Translates to: RLLPNLGCCEQC*NKHGGADTSSI Trigger: TATTGAAGAGGTATCTGCACCCCCATGTTTATTGCAGCACTGTTCACAACAGCCAAGATTTGGAAGCAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | CACATTGTTAATGAGCACAGACTCGCAGAATGCAGGACACGGATGGTGCGGGGGGCCACCACCTTGTTCTaGAGCGCCGCCTCGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HIVNEHRLAECRTRMVRGATTLF*SAASAS Trigger: GGAGGCCGAGGCGGCGCTGCAGAACAAGGTGGTGGC...CCCCCGCACCATCCGTGTCCTGCATTCTGCGAGTCTGTGCTCATTAACAATGTG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR TCA 90 bp | CACATTGTTAATGAGCACAGACTCGCAGAATGCAGGACACGGATGGTGCGGGGGGGAGCTGCCGTCGGCTaGCACGAAGACCACTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: HIVNEHRLAECRTRMVRGGAAVG*HEDHFE Trigger: TTCGAAGTGGTCTTCGTGTCAGCCGACGGCAGCTCC...CCCCCGCACCATCCGTGTCCTGCATTCTGCGAGTCTGTGCTCATTAACAATGTG 58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CCA 90 bp | GGAGAACAGCTGCACTCTCGGAGTGTCCAACTCCTCTTCAATATCTTTCCCTCAGATGCGCCCACACCTTaGCCAGGCCTCGCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GEQLHSRSVQLLFNIFPSDAPTP*PGLACG Trigger: GCCACAGGCGAGGCCTGGCCAAGGTGTGGGCGCATC...TGAGGGAAAGATATTGAAGAGGAGTTGGACACTCCGAGAGTGCAGCTGTTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CCA 90 bp | GGAGAACAGCTGCACTCTCGGAGTGTCCAACTCCTCTTCAATATCTTTCCCTCACGCACCACCGGGCGCTaGACCTCTCAAGACCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GEQLHSRSVQLLFNIFPSRTTGR*TSQDLP Trigger: GGGCAGGTCTTGAGAGGTCCAGCGCCCGGTGGTGCG...TGAGGGAAAGATATTGAAGAGGAGTTGGACACTCCGAGAGTGCAGCTGTTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR TCA 90 bp | GCAATAAACATGGGGGTGCAGATACCTCTTCAATATACTGGCTTCCTTTTCCTTCGCAGAGCAGCGGCGTaGAGTCGCGGCTCGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: AINMGVQIPLQYTGFLFLRRAAA*SRGSAR Trigger: GCGCGCCGAGCCGCGACTTCACGCCGCTGCTCTGCG...AAGGAAAAGGAAGCCAGTATATTGAAGAGGTATCTGCACCCCCATGTTTATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CCA 90 bp | CACATTGTTAATGAGCACAGACTCGCAGAATGCAGGACACGGATGGTGCGGGGGCCAGAATGTCAACCATaGCGCAGACACGCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: HIVNEHRLAECRTRMVRGPECQP*RRHAAT Trigger: GGTGGCTGCGTGTCTGCGCCATGGTTGACATTCTGG...CCCCCGCACCATCCGTGTCCTGCATTCTGCGAGTCTGTGCTCATTAACAATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | ACTCTCGGAGTGTCCAACTCCTCTTCAATATCTTTCCCTCACGTAATTCACAGCAGGAGGATGATCACCTaGGGGGAGGCGGCGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: TLGVSNSSSISFPHVIHSRRMIT*GEAAAS Trigger: GCTCGCCGCCGCCTCCCCGCAGGTGATCATCCTCCT...GCTGTGAATTACGTGAGGGAAAGATATTGAAGAGGAGTTGGACACTCCGAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CCA 90 bp | GGAGAACAGCTGCACTCTCGGAGTGTCCAACTCCTCTTCAATATCTTTCCCTCAAAGTCCAGCATCTCCTaGGAGCTGCCGTCGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: GEQLHSRSVQLLFNIFPSKSSIS*ELPSAD Trigger: GTCAGCCGACGGCAGCTCCCAGGAGATGCTGGACTT...TGAGGGAAAGATATTGAAGAGGAGTTGGACACTCCGAGAGTGCAGCTGTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | AGTGTCCAACTCCTCTTCAATATCTTTCCCTCACGTAATTCACAGCAATGGCTGGCCAGCCAGGCGCCATaGAGCTCGCGCATGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SVQLLFNIFPSRNSQQWLASQAP*SSRMKS Trigger: GGACTTCATGCGCGAGCTGCATGGCGCCTGGCTGGC...CAGCCATTGCTGTGAATTACGTGAGGGAAAGATATTGAAGAGGAGTTGGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR TCA 90 bp | AGTGTCCAACTCCTCTTCAATATCTTTCCCTCACGTAATTCACAGCAATGGCTGAGACACGCAGCCACCTaGGACCCGAGGACACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SVQLLFNIFPSRNSQQWLRHAAT*DPRTPA Trigger: TGCAGGTGTCCTCGGGTCTCAGGTGGCTGCGTGTCT...CAGCCATTGCTGTGAATTACGTGAGGGAAAGATATTGAAGAGGAGTTGGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | ACTCTCGGAGTGTCCAACTCCTCTTCAATATCTTTCCCTCACGTAATTCACAGCGCATCTCCTGGGAGCTaGCGTCGGCTGACACGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TLGVSNSSSISFPHVIHSASPGS*RRLTRR Trigger: TCTTCGTGTCAGCCGACGGCAGCTCCCAGGAGATGC...GCTGTGAATTACGTGAGGGAAAGATATTGAAGAGGAGTTGGACACTCCGAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | CACATTGTTAATGAGCACAGACTCGCAGAATGCAGGACACGGATGGTGCGGGGGGGCTGTTGTGAACAGTaGTGCAATAAACATGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HIVNEHRLAECRTRMVRGGCCEQ*CNKHGG Trigger: ACCCCCATGTTTATTGCAGCACTGTTCACAACAGCC...CCCCCGCACCATCCGTGTCCTGCATTCTGCGAGTCTGTGCTCATTAACAATGTG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR TCA 90 bp | GCAATAAACATGGGGGTGCAGATACCTCTTCAATATACTGGCTTCCTTTTCCTTCATGCAGCTCGCGCATaGAGTCCAGCATCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AINMGVQIPLQYTGFLFLHAARA*SPASPG Trigger: CCCAGGAGATGCTGGACTTCATGCGCGAGCTGCATG...AAGGAAAAGGAAGCCAGTATATTGAAGAGGTATCTGCACCCCCATGTTTATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | TTTCCAGCTTCTGGTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTAAGCCCTCAGGTCTCTaGACCCTCCCCCAACTGCGC | + |
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Preference number: 4 (lower is better) Translates to: FPASGNQPSTLYVQEFNCKPSGL*TLPQLR Trigger: GCGCAGTTGGGGGAGGGTGCAGAGACCTGAGGGCTT...ACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTACCAGAAGCTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | AATAAACATGGGGGTGCAGATACCTCTTCAATATACTGGCTTCCTTTTCCTTTCGGACCTCTCAAGACCTaGCCCAGATGCGCCCACACC | + |
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Preference number: 4 (lower is better) Translates to: NKHGGADTSSIYWLPFPFGPLKT*PRCAHT Trigger: GGTGTGGGCGCATCTGGGGCAGGTCTTGAGAGGTCC...GAAAGGAAAAGGAAGCCAGTATATTGAAGAGGTATCTGCACCCCCATGTTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CCA 90 bp | TTTCCAGCTTCTGGTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTGGCCTCGCCTGTGGCTaGAGCAATTGTGTTCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: FPASGNQPSTLYVQEFNCGLACG*SNCVRA Trigger: GGCGCGAACACAATTGCTCCAGCCACAGGCGAGGCC...ACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTACCAGAAGCTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CCA 90 bp | CATTCATCTGTTGATGGACACTTAGGTTGCTTCCAAATCTTGGCTGTTGTGAACGCCAGGCCTCGCCTGTaGCTGGAGCAATTGTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: HSSVDGHLGCFQILAVVNARPRL*LEQLCS Trigger: CGAACACAATTGCTCCAGCCACAGGCGAGGCCTGGC...GTTCACAACAGCCAAGATTTGGAAGCAACCTAAGTGTCCATCAACAGATGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR CAA 72 bp | AGCAGCAGGATTGCTGAGTCACATGGTCACAGCACATaGTTAATGAGCACAGACTCGCAGAATGCAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: SSRIAESHGHST*LMSTDSQNAGH Trigger: GTGTCCTGCATTCTGCGAGTCTGTGCTCATTAACAATGTGCTGTGACCATGTGACTCAGCAATCCTGCTGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR TCA 90 bp | AGTGTCCAACTCCTCTTCAATATCTTTCCCTCACGTAATTCACAGCAATGGCTGTGTTCGCGCCGACAATaGGACACTCAGACACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SVQLLFNIFPSRNSQQWLCSRRQ*DTQTPE Trigger: CTCTGGTGTCTGAGTGTCTCATTGTCGGCGCGAACA...CAGCCATTGCTGTGAATTACGTGAGGGAAAGATATTGAAGAGGAGTTGGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR TCA 90 bp | CTGGTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATTACACCTGCAGGAGGATaGTCACCTGCGGGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LVTNLLLSMSKSSIVLIITPAGG*SPAGRR Trigger: CCGCCTCCCCGCAGGTGATCATCCTCCTGCAGGTGT...AATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | CATTCATCTGTTGATGGACACTTAGGTTGCTTCCAAATCTTGGCTGTTGTGAACTTACAGGTCACCAGGTaGCGCTCGCCCAGAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: HSSVDGHLGCFQILAVVNLQVTR*RSPRMS Trigger: TGACATTCTGGGCGAGCGGCACCTGGTGACCTGTAA...GTTCACAACAGCCAAGATTTGGAAGCAACCTAAGTGTCCATCAACAGATGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | GGAGAACAGCTGCACTCTCGGAGTGTCCAACTCCTCTTCAATATCTTTCCCTCATGTTGTGAACAGTGCTaGAATAAACATGGGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: GEQLHSRSVQLLFNIFPSCCEQC*NKHGGA Trigger: TGCACCCCCATGTTTATTGCAGCACTGTTCACAACA...TGAGGGAAAGATATTGAAGAGGAGTTGGACACTCCGAGAGTGCAGCTGTTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | GTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATTAGAAGACCCGAGGACACCTaGAGGAGGATGATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTNLLLSMSKSSIVLIIRRPEDT*RRMITC Trigger: GCAGGTGATCATCCTCCTGCAGGTGTCCTCGGGTCT...TCTAATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | GTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATTAGACGCCGCGAAGTACAGTaGCACCACCTTGTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VTNLLLSMSKSSIVLIIRRREVQ*HHLVLQ Trigger: CTGCAGAACAAGGTGGTGGCACTGTACTTCGCGGCG...TCTAATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | GTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATTAGACACAGACTCGCAGAATaGAGGACACGGATGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: VTNLLLSMSKSSIVLIIRHRLAE*RTRMVR Trigger: CCGCACCATCCGTGTCCTGCATTCTGCGAGTCTGTG...TCTAATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| 3UTR CAA 72 bp | TCATCTGTTGATGGACACTTAGGTTGCTTCCAAATCTaGGCTGTTGTGAACAGTGCTGCAATAAACATGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSVDGHLGCFQI*AVVNSAAINMG Trigger: CCCCATGTTTATTGCAGCACTGTTCACAACAGCCAAGATTTGGAAGCAACCTAAGTGTCCATCAACAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR TCA 90 bp | GAACAGTGCTGCAATAAACATGGGGGTGCAGATACCTCTTCAATATACTGGCTTATAAGTGAGAACATGTaGTGTTTGTCTTTCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: EQCCNKHGGADTSSIYWLISENM*CLSFCA Trigger: GGCACAGAAAGACAAACATCACATGTTCTCACTTAT...AAGCCAGTATATTGAAGAGGTATCTGCACCCCCATGTTTATTGCAGCACTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | CTGGTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATTGATGGACACTTAGGTTaGTTCCAAATCTTGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LVTNLLLSMSKSSIVLIIDGHLG*FQILAV Trigger: AACAGCCAAGATTTGGAAGCAACCTAAGTGTCCATC...AATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR GCA 90 bp | AATAAACATGGGGGTGCAGATACCTCTTCAATATACTGGCTTCCTTTTCCTTTCGTAGTCACACTGTTGTaGTATCAAATATTAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: NKHGGADTSSIYWLPFPFVVTLL*YQILGL Trigger: AAGACCTAATATTTGATAGCACAACAGTGTGACTAC...GAAAGGAAAAGGAAGCCAGTATATTGAAGAGGTATCTGCACCCCCATGTTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR TCA 90 bp | GTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATTAGAGATCCCACAAATAAGTaGGAACATGTGATGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: VTNLLLSMSKSSIVLIIRDPTNK*EHVMFV Trigger: GACAAACATCACATGTTCTCACTTATTTGTGGGATC...TCTAATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CCA 90 bp | TCTGGTAACCAACCTTCTACTCTCTATGTCCAAGAGTTCAATTGTTTTGATCATACCTCTTCAATATACTaGCTTCCTTTTCCTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SGNQPSTLYVQEFNCFDHTSSIY*LPFPFF Trigger: AAAGAAAGGAAAAGGAAGCCAGTATATTGAAGAGGT...ATGATCAAAACAATTGAACTCTTGGACATAGAGAGTAGAAGGTTGGTTACCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS CCA 90 bp | CGGCGAGCGCCGCGGTGCCCCGCCTCTGTCCGCACCACCGGGCGCTaGACCTCTCAAGACCTGCCCCAGATGCGCCCACACCTTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRAPRCPASVRTTGR*TSQDLPQMRPHLGQ Trigger: CTGGCCAAGGTGTGGGCGCATCTGGGGCAGGTCTTGAGAGGTCCAGCGCCCGGTGGTGCGGACAGAGGCGGGGCACCGCGGCGCTCGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS GCA 90 bp | CGTGAAGTCGCGGCTCGGCGCGCACCGGGCCGCCGCGAAGTACAGTaGCACCACCTTGTTCTGCAGCGCCGCCTCGGCCTCCACCGTCGC | + |
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Preference number: 5 (lower is better) Translates to: REVAARRAPGRREVQ*HHLVLQRRLGLHRR Trigger: GCGACGGTGGAGGCCGAGGCGGCGCTGCAGAACAAGGTGGTGGCACTGTACTTCGCGGCGGCCCGGTGCGCGCCGAGCCGCGACTTCACG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS TCA 90 bp | GCGCCTCGGCCACCAGCGCCGTATAGAAGTCGCAGAGCAGCGGCGTaGAGTCGCGGCTCGGCGCGCACCGGGCCGCCGCGAAGTACAGTG | + |
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Preference number: 5 (lower is better) Translates to: APRPPAPYRSRRAAA*SRGSARTGPPRSTV Trigger: CACTGTACTTCGCGGCGGCCCGGTGCGCGCCGAGCCGCGACTTCACGCCGCTGCTCTGCGACTTCTATACGGCGCTGGTGGCCGAGGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS GCA 90 bp | GCCCCGCCTCTGTCCGCACCACCGGGCGCTGGACCTCTCAAGACCTaGCCCAGATGCGCCCACACCTTGGCCAGGCCTCGCCTGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: APPLSAPPGAGPLKT*PRCAHTLARPRLWL Trigger: CAGCCACAGGCGAGGCCTGGCCAAGGTGTGGGCGCATCTGGGGCAGGTCTTGAGAGGTCCAGCGCCCGGTGGTGCGGACAGAGGCGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS TCA 90 bp | CAGCTCGCGCATGAAGTCCAGCATCTCCTGGGAGCTGCCGTCGGCTaGCACGAAGACCACTTCGAAGGGCGCGGGCCGCCGCGCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: QLAHEVQHLLGAAVG*HEDHFEGRGPPRLG Trigger: GCCGAGGCGCGGCGGCCCGCGCCCTTCGAAGTGGTCTTCGTGTCAGCCGACGGCAGCTCCCAGGAGATGCTGGACTTCATGCGCGAGCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS GCA 90 bp | TCAACCATGGCGCAGACACGCAGCCACCTGAGACCCGAGGACACCTaGAGGAGGATGATCACCTGCGGGGAGGCGGCGGCGAGCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: STMAQTRSHLRPEDT*RRMITCGEAAASAA Trigger: CGCGGCGCTCGCCGCCGCCTCCCCGCAGGTGATCATCCTCCTGCAGGTGTCCTCGGGTCTCAGGTGGCTGCGTGTCTGCGCCATGGTTGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS GCA 90 bp | AGCGCCGCCTCGGCCTCCACCGTCGCGCCCTTACAGGTCACCAGGTaGCGCTCGCCCAGAATGTCAACCATGGCGCAGACACGCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: SAASASTVAPLQVTR*RSPRMSTMAQTRSH Trigger: GTGGCTGCGTGTCTGCGCCATGGTTGACATTCTGGGCGAGCGGCACCTGGTGACCTGTAAGGGCGCGACGGTGGAGGCCGAGGCGGCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS CCA 90 bp | CGGGCGCTGGACCTCTCAAGACCTGCCCCAGATGCGCCCACACCTTaGCCAGGCCTCGCCTGTGGCTGGAGCAATTGTGTTCGCGCCGAC | + |
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Preference number: 5 (lower is better) Translates to: RALDLSRPAPDAPTP*PGLACGWSNCVRAD Trigger: GTCGGCGCGAACACAATTGCTCCAGCCACAGGCGAGGCCTGGCCAAGGTGTGGGCGCATCTGGGGCAGGTCTTGAGAGGTCCAGCGCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS CCA 90 bp | GCCAGCCAGGCGCCATGCAGCTCGCGCATGAAGTCCAGCATCTCCTaGGAGCTGCCGTCGGCTGACACGAAGACCACTTCGAAGGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: ASQAPCSSRMKSSIS*ELPSADTKTTSKGA Trigger: CGCGCCCTTCGAAGTGGTCTTCGTGTCAGCCGACGGCAGCTCCCAGGAGATGCTGGACTTCATGCGCGAGCTGCATGGCGCCTGGCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS CCA 90 bp | CCTGCCCCAGATGCGCCCACACCTTGGCCAGGCCTCGCCTGTGGCTaGAGCAATTGTGTTCGCGCCGACAATGAGACACTCAGACACCAG | + |
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Preference number: 5 (lower is better) Translates to: PAPDAPTPWPGLACG*SNCVRADNETLRHQ Trigger: CTGGTGTCTGAGTGTCTCATTGTCGGCGCGAACACAATTGCTCCAGCCACAGGCGAGGCCTGGCCAAGGTGTGGGCGCATCTGGGGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS TCA 90 bp | GCCAGGCCTCGCCTGTGGCTGGAGCAATTGTGTTCGCGCCGACAATaGGACACTCAGACACCAGAGACCCCAGATACCTGGGCGACAGCG | + |
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Preference number: 5 (lower is better) Translates to: ARPRLWLEQLCSRRQ*DTQTPETPDTWATA Trigger: CGCTGTCGCCCAGGTATCTGGGGTCTCTGGTGTCTGAGTGTCTCATTGTCGGCGCGAACACAATTGCTCCAGCCACAGGCGAGGCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS CCA 90 bp | CAAACGGAGAAATTCTGGAAGATATCGGCCGCCTCCACCCAGTCCTaGAAGCAGGCCAACCCCCGTTCCCGGATCTGCTTCCGCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: QTEKFWKISAASTQS*KQANPRSRICFRPL Trigger: CAAAGGGCGGAAGCAGATCCGGGAACGGGGGTTGGCCTGCTTCCAGGACTGGGTGGAGGCGGCCGATATCTTCCAGAATTTCTCCGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000375854.7 ENST00000487646.2 ENST00000649870.1 |
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| CDS CCA 90 bp | TGTCCTGGCCCTCTGAGGTCCCTCCCACTTCAAACGGAGAAATTCTaGAAGATATCGGCCGCCTCCACCCAGTCCTGGAAGCAGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CPGPLRSLPLQTEKF*KISAASTQSWKQAN Trigger: GTTGGCCTGCTTCCAGGACTGGGTGGAGGCGGCCGATATCTTCCAGAATTTCTCCGTTTGAAGTGGGAGGGACCTCAGAGGGCCAGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000487646.2 ENST00000649870.1 |
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| CDS CCA 90 bp | CTCCTCTTTGCCCCAGCGTCGGTGCTGGAGAAGCAGCACCTGTCCTaGCCCTCTGAGGTCCCTCCCACTTCAAACGGAGAAATTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLFAPASVLEKQHLS*PSEVPPTSNGEILE Trigger: TTCCAGAATTTCTCCGTTTGAAGTGGGAGGGACCTCAGAGGGCCAGGACAGGTGCTGCTTCTCCAGCACCGACGCTGGGGCAAAGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487646.2 ENST00000649870.1 |
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| CDS GCA 90 bp | AATGAAATCACACCAACAGAGGAAGGAACCCAACATGCTCCTCTTTaGCCCAGCGTCGGTGCTGGAGAAGCAGCACCTGTCCTGGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: NEITPTEEGTQHAPL*PSVGAGEAAPVLAL Trigger: GAGGGCCAGGACAGGTGCTGCTTCTCCAGCACCGACGCTGGGGCAAAGAGGAGCATGTTGGGTTCCTTCCTCTGTTGGTGTGATTTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000487646.2 ENST00000649870.1 |
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| CDS-3UTR CAA 90 bp | AATCTTGGCTGTTGTGAACAGTGCTGCAATAAACATGGGGGTGCAGATACCTCTAGATGCGCCCACACCTaGGCCAGGCCTCGCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NLGCCEQCCNKHGGADTSRCAHT*ARPRLW Trigger: CCACAGGCGAGGCCTGGCCAAGGTGTGGGCGCATCT...AGAGGTATCTGCACCCCCATGTTTATTGCAGCACTGTTCACAACAGCCAAGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CAA 90 bp | AATCTTGGCTGTTGTGAACAGTGCTGCAATAAACATGGGGGTGCAGATACCTCTCAGAGCGAGACTCCGTaGCCGGTAGGGGTCGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NLGCCEQCCNKHGGADTSQSETP*PVGVVE Trigger: TTCCACGACCCCTACCGGCAACGGAGTCTCGCTCTG...AGAGGTATCTGCACCCCCATGTTTATTGCAGCACTGTTCACAACAGCCAAGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CAA 90 bp | GAACAGTGCTGCAATAAACATGGGGGTGCAGATACCTCTTCAATATACTGGCTTTACAGTGCCACCACCTaGTTCTGCAGCGCCGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EQCCNKHGGADTSSIYWLYSATT*FCSAAS Trigger: CGAGGCGGCGCTGCAGAACAAGGTGGTGGCACTGTA...AAGCCAGTATATTGAAGAGGTATCTGCACCCCCATGTTTATTGCAGCACTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS-3UTR CAA 90 bp | GGAGAACAGCTGCACTCTCGGAGTGTCCAACTCCTCTTCAATATCTTTCCCTCATACCCAGCAGCAGGATaGCTGAGTCACATGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GEQLHSRSVQLLFNIFPSYPAAG*LSHMVT Trigger: TGTGACCATGTGACTCAGCAATCCTGCTGCTGGGTA...TGAGGGAAAGATATTGAAGAGGAGTTGGACACTCCGAGAGTGCAGCTGTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS CCA 90 bp | ACCAGCTTCTTCCCAGTGATGCTTTCGGATGATTCTGCAGGCAATTaGATTGCTTCCACCAGATGGCTTGGAACAGAAAGTGCAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TSFFPVMLSDDSAGN*IASTRWLGTESAGM Trigger: CATGCCTGCACTTTCTGTTCCAAGCCATCTGGTGGAAGCAATCCAATTGCCTGCAGAATCATCCGAAAGCATCACTGGGAAGAAGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478686.1 |
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| CDS-3UTR CAA 90 bp | CACATTGTTAATGAGCACAGACTCGCAGAATGCAGGACACGGATGGTGCGGGGGCTGAAGAGTACTCCATaGTGTATATGTACCACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HIVNEHRLAECRTRMVRGLKSTP*CICTTF Trigger: AAACGTGGTACATATACACAATGGAGTACTCTTCAG...CCCCCGCACCATCCGTGTCCTGCATTCTGCGAGTCTGTGCTCATTAACAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375855.3 |
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| CDS TCA 90 bp | GTCAGGCTAAAGAATTGCTTCTTAGTTCCACCAGCTTCTTCCCAGTaGTGCTTTCGGATGATTCTGCAGGCAATTGGATTGCTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VRLKNCFLVPPASSQ*CFRMILQAIGLLPP Trigger: TGGTGGAAGCAATCCAATTGCCTGCAGAATCATCCGAAAGCATCACTGGGAAGAAGCTGGTGGAACTAAGAAGCAATTCTTTAGCCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478686.1 |
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| CDS GCA 72 bp | GCGGCTCGGCGCGCACCGGGCCGCCGCGAAGTACAGTaGCACCACCTTGTTCTGCAGCGCCGCCTCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AARRAPGRREVQ*HHLVLQRRLGL Trigger: GAGGCCGAGGCGGCGCTGCAGAACAAGGTGGTGGCACTGTACTTCGCGGCGGCCCGGTGCGCGCCGAGCCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS CCA 72 bp | CCGCGGTGCCCCGCCTCTGTCCGCACCACCGGGCGCTaGACCTCTCAAGACCTGCCCCAGATGCGCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: PRCPASVRTTGR*TSQDLPQMRPH Trigger: GTGTGGGCGCATCTGGGGCAGGTCTTGAGAGGTCCAGCGCCCGGTGGTGCGGACAGAGGCGGGGCACCGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS CAA 72 bp | GCGCACCGGGCCGCCGCGAAGTACAGTGCCACCACCTaGTTCTGCAGCGCCGCCTCGGCCTCCACCGTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: AHRAAAKYSATT*FCSAASASTVA Trigger: CGCGACGGTGGAGGCCGAGGCGGCGCTGCAGAACAAGGTGGTGGCACTGTACTTCGCGGCGGCCCGGTGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS CAA 90 bp | CGGCTCGGCGCGCACCGGGCCGCCGCGAAGTACAGTGCCACCACCTaGTTCTGCAGCGCCGCCTCGGCCTCCACCGTCGCGCCCTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: RLGAHRAAAKYSATT*FCSAASASTVAPLQ Trigger: CTGTAAGGGCGCGACGGTGGAGGCCGAGGCGGCGCTGCAGAACAAGGTGGTGGCACTGTACTTCGCGGCGGCCCGGTGCGCGCCGAGCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS GCA 72 bp | CTGTCCGCACCACCGGGCGCTGGACCTCTCAAGACCTaGCCCAGATGCGCCCACACCTTGGCCAGGCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSAPPGAGPLKT*PRCAHTLARPR Trigger: GCGAGGCCTGGCCAAGGTGTGGGCGCATCTGGGGCAGGTCTTGAGAGGTCCAGCGCCCGGTGGTGCGGACAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS GCA 72 bp | GCGCAGACACGCAGCCACCTGAGACCCGAGGACACCTaGAGGAGGATGATCACCTGCGGGGAGGCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AQTRSHLRPEDT*RRMITCGEAAA Trigger: CGCCGCCGCCTCCCCGCAGGTGATCATCCTCCTGCAGGTGTCCTCGGGTCTCAGGTGGCTGCGTGTCTGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS TCA 72 bp | AGGGCAGCGCCAGCCAGGCGCCATGCAGCTCGCGCATaGAGTCCAGCATCTCCTGGGAGCTGCCGTCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAAPARRHAARA*SPASPGSCRRL Trigger: CAGCCGACGGCAGCTCCCAGGAGATGCTGGACTTCATGCGCGAGCTGCATGGCGCCTGGCTGGCGCTGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS TCA 72 bp | CATGAAGTCCAGCATCTCCTGGGAGCTGCCGTCGGCTaGCACGAAGACCACTTCGAAGGGCGCGGGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: HEVQHLLGAAVG*HEDHFEGRGPP Trigger: CGGCGGCCCGCGCCCTTCGAAGTGGTCTTCGTGTCAGCCGACGGCAGCTCCCAGGAGATGCTGGACTTCATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS GCA 72 bp | TCGGCCTCCACCGTCGCGCCCTTACAGGTCACCAGGTaGCGCTCGCCCAGAATGTCAACCATGGCGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SASTVAPLQVTR*RSPRMSTMAQT Trigger: TGTCTGCGCCATGGTTGACATTCTGGGCGAGCGGCACCTGGTGACCTGTAAGGGCGCGACGGTGGAGGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 ENST00000649870.1 |
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| CDS TCA 72 bp | CCAGAATGTCAACCATGGCGCAGACACGCAGCCACCTaGGACCCGAGGACACCTTGGAGCTCTTGCCGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PECQPWRRHAAT*DPRTPWSSCRA Trigger: CGCGCGGCAAGAGCTCCAAGGTGTCCTCGGGTCTCAGGTGGCTGCGTGTCTGCGCCATGGTTGACATTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649870.1 |
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| CDS GCA 72 bp | AGGAACCCAACATGCTCCTCTTTGCCCCAGCGTCGGTaGTGGAGAAGCAGCACCTGTCCTGGCCCTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RNPTCSSLPQRR*WRSSTCPGPLR Trigger: CCTCAGAGGGCCAGGACAGGTGCTGCTTCTCCAGCACCGACGCTGGGGCAAAGAGGAGCATGTTGGGTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487646.2 ENST00000649870.1 |
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| CDS CCA 72 bp | GATGCGCCCACACCTTGGCCAGGCCTCGCCTGTGGCTaGAGCAATTGTGTTCGCGCCGACAATGAGACACTC | + |
|
Preference number: 6 (lower is better) Translates to: DAPTPWPGLACG*SNCVRADNETL Trigger: GAGTGTCTCATTGTCGGCGCGAACACAATTGCTCCAGCCACAGGCGAGGCCTGGCCAAGGTGTGGGCGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS CCA 72 bp | GACCTCTCAAGACCTGCCCCAGATGCGCCCACACCTTaGCCAGGCCTCGCCTGTGGCTGGAGCAATTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: DLSRPAPDAPTP*PGLACGWSNCV Trigger: AACACAATTGCTCCAGCCACAGGCGAGGCCTGGCCAAGGTGTGGGCGCATCTGGGGCAGGTCTTGAGAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS GCA 72 bp | CAGTCCTGGAAGCAGGCCAACCCCCGTTCCCGGATCTaGTTCCGCCCTTTGTTGGTGATGACCTCCCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: QSWKQANPRSRI*FRPLLVMTSPF Trigger: AAATGGGGAGGTCATCACCAACAAAGGGCGGAAGCAGATCCGGGAACGGGGGTTGGCCTGCTTCCAGGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000375854.7 ENST00000487646.2 ENST00000649870.1 |
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| CDS CCA 72 bp | AAATTCTGGAAGATATCGGCCGCCTCCACCCAGTCCTaGAAGCAGGCCAACCCCCGTTCCCGGATCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KFWKISAASTQS*KQANPRSRICF Trigger: GAAGCAGATCCGGGAACGGGGGTTGGCCTGCTTCCAGGACTGGGTGGAGGCGGCCGATATCTTCCAGAATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000375854.7 ENST00000487646.2 ENST00000649870.1 |
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| CDS TCA 72 bp | CGCCTGTGGCTGGAGCAATTGTGTTCGCGCCGACAATaGGACACTCAGACACCAGAGACCCCAGATACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLWLEQLCSRRQ*DTQTPETPDTW Trigger: CCAGGTATCTGGGGTCTCTGGTGTCTGAGTGTCTCATTGTCGGCGCGAACACAATTGCTCCAGCCACAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375854.7 ENST00000375855.3 ENST00000478686.1 ENST00000487646.2 ENST00000618633.1 |
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| CDS GCA 72 bp | ACACCAACAGAGGAAGGAACCCAACATGCTCCTCTTTaGCCCAGCGTCGGTGCTGGAGAAGCAGCACCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TPTEEGTQHAPL*PSVGAGEAAPV Trigger: GACAGGTGCTGCTTCTCCAGCACCGACGCTGGGGCAAAGAGGAGCATGTTGGGTTCCTTCCTCTGTTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000487646.2 ENST00000649870.1 |
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| CDS CCA 72 bp | CCTCTGAGGTCCCTCCCACTTCAAACGGAGAAATTCTaGAAGATATCGGCCGCCTCCACCCAGTCCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLRSLPLQTEKF*KISAASTQSWK Trigger: CTTCCAGGACTGGGTGGAGGCGGCCGATATCTTCCAGAATTTCTCCGTTTGAAGTGGGAGGGACCTCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000487646.2 ENST00000649870.1 |
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| CDS CCA 72 bp | TTCTGCAGGCAATTGGATTGCTTCCACCAGATGGCTTaGAACAGAAAGTGCAGGCATGGAGAGAAGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FCRQLDCFHQMA*NRKCRHGEKVA Trigger: GGCCACCTTCTCTCCATGCCTGCACTTTCTGTTCCAAGCCATCTGGTGGAAGCAATCCAATTGCCTGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478686.1 |
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| CDS CAA 90 bp | TTCCCGGATCTGCTTCCGCCCTTTGTTGGTGATGACCTCCCCATTTaGTTTCACAATCACAAGCTTGGGGATGGCTGTGACGTTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: FPDLLPPFVGDDLPI*FHNHKLGDGCDVVP Trigger: AGGTACAACGTCACAGCCATCCCCAAGCTTGTGATTGTGAAACAAAATGGGGAGGTCATCACCAACAAAGGGCGGAAGCAGATCCGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375854.7 ENST00000487646.2 ENST00000649870.1 |
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| CDS CAA 72 bp | CTGCTTCCGCCCTTTGTTGGTGATGACCTCCCCATTTaGTTTCACAATCACAAGCTTGGGGATGGCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LLPPFVGDDLPI*FHNHKLGDGCD Trigger: GTCACAGCCATCCCCAAGCTTGTGATTGTGAAACAAAATGGGGAGGTCATCACCAACAAAGGGCGGAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375854.7 ENST00000487646.2 ENST00000649870.1 |
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| CDS CAA 72 bp | ATTCTGCAGGCAATTGGATTGCTTCCACCAGATGGCTaGGAACAGAAAGTGCAGGCATGGAGAGAAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILQAIGLLPPDG*EQKVQAWREGG Trigger: GCCACCTTCTCTCCATGCCTGCACTTTCTGTTCCAAGCCATCTGGTGGAAGCAATCCAATTGCCTGCAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478686.1 |
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| CDS CAA 90 bp | TTTCGGATGATTCTGCAGGCAATTGGATTGCTTCCACCAGATGGCTaGGAACAGAAAGTGCAGGCATGGAGAGAAGGTGGCCGCATGTAT | + |
|
Preference number: 6 (lower is better) Translates to: FRMILQAIGLLPPDG*EQKVQAWREGGRMY Trigger: ATACATGCGGCCACCTTCTCTCCATGCCTGCACTTTCTGTTCCAAGCCATCTGGTGGAAGCAATCCAATTGCCTGCAGAATCATCCGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478686.1 |
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| CDS TCA 72 bp | AAGAATTGCTTCTTAGTTCCACCAGCTTCTTCCCAGTaGTGCTTTCGGATGATTCTGCAGGCAATTGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: KNCFLVPPASSQ*CFRMILQAIGL Trigger: CAATCCAATTGCCTGCAGAATCATCCGAAAGCATCACTGGGAAGAAGCTGGTGGAACTAAGAAGCAATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478686.1 |
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| CDS CAA 72 bp | AGTTGTAGGACCTCAGGCAAATCACCTCGACAGCCCTaGGCTTCTTCTGAGATGATTTCATGTTTAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: SCRTSGKSPRQP*ASSEMISCLEI Trigger: TATTTCTAAACATGAAATCATCTCAGAAGAAGCCAAGGGCTGTCGAGGTGATTTGCCTGAGGTCCTACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478686.1 |
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| CDS CAA 90 bp | TCAGTGATGAGTTGTAGGACCTCAGGCAAATCACCTCGACAGCCCTaGGCTTCTTCTGAGATGATTTCATGTTTAGAAATACTAAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SVMSCRTSGKSPRQP*ASSEMISCLEILKT Trigger: TGTTTTTAGTATTTCTAAACATGAAATCATCTCAGAAGAAGCCAAGGGCTGTCGAGGTGATTTGCCTGAGGTCCTACAACTCATCACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478686.1 |
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| CDS TCA 72 bp | TCTTGCATAGATTTCCAACAGCTCAGTATGAACATATaGGGATCCTTCCTTAAGCACAGGTGGATAAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SCIDFQQLSMNI*GSFLKHRWIKV Trigger: TACCTTTATCCACCTGTGCTTAAGGAAGGATCCTCATATGTTCATACTGAGCTGTTGGAAATCTATGCAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000487646.2 ENST00000649870.1 |
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