Pregenerated sensors for NXF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000147206Ensembl transcript IDs: ENST00000395065.8, ENST00000427570.1, ENST00000460791.1, ENST00000468528.5, ENST00000494300.1, ENST00000497850.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTaGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: QNNWPLWKDESQPCE*GFGFLAPARSPGSV Trigger: GACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| 3UTR-3UTR CCA 90 bp | GGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGCCCAGCCAGATCTCCTaGTTCAGTCACAGGGAAATA | + |
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Preference number: 2 (lower is better) Translates to: GQVHRTTGPFGRMRVSPVPSQIS*FSHREI Trigger: TATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGG...CACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| 3UTR CCA 72 bp | CAGGGGTGGACAAGTGCACAGAACAACTGGCCCCTTTaGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: QGWTSAQNNWPL*KDESQPCELGF Trigger: GAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCCACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| 3UTR CCA 72 bp | GTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTaGTTCAGTCACAGGGAAATACATCTTGGGCCATGC | + |
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Preference number: 3 (lower is better) Translates to: VGLRLLSPSQIS*FSHREIHLGPC Trigger: GCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| 3UTR TCA 72 bp | CAGGGATTTGACATAACAAGACACCATACTTTATTGTaGAAAGGAACAGAGATCCTGGGGGTAACAGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: QGFDITRHHTLL*KGTEILGVTGV Trigger: CACCCCTGTTACCCCCAGGATCTCTGTTCCTTTTCACAATAAAGTATGGTGTCTTGTTATGTCAAATCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | GAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGGAAGCTGCTCGGGGCTaGGTCCTCAGGATTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: ELGFGFLAPARSPGSVTGEAARG*VLRIEG Trigger: CCCTTCAATCCTGAGGACTCAGCCCCGAGCAGCTTC...CCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTCAGCCCTGTGAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTCTCTGGGTCCCTTGGTaGCTGGTATCCCGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: ESQPCELGFGFLAPARSPLWVPW*LVSRTK Trigger: CTTTGTGCGGGATACCAGCCACCAAGGGACCCAGAG...AGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | GGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATAATTGAGGAGGGCTGCTaGCGAAGGCGAGAGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GLRLLSPSQISWFSHREIIEEGC*RRREQA Trigger: GGCTTGCTCTCGCCTTCGTCAGCAGCCCTCCTCAAT...TATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | CCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTCGGCTTCTTAGCCGGCAGCATTTTCTGCTaGTCCTGGGAGAAGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PLWKDESQPCELGFGFLAGSIFC*SWEKAG Trigger: GCCTGCCTTCTCCCAGGAGCAGCAGAAAATGCTGCC...GGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | GGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATAGCACTCTGGGTCCCTTaGTGGCTGGTATCCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: GLRLLSPSQISWFSHREIALWVP*WLVSRT Trigger: TGTGCGGGATACCAGCCACCAAGGGACCCAGAGTGC...TATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTCAGGCAGGCACGGAGCTaGAGAAGGCTGTGGGCACTA | + |
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Preference number: 4 (lower is better) Translates to: QNNWPLWKDESQPCELGFRQARS*RRLWAL Trigger: TAGTGCCCACAGCCTTCTCCAGCTCCGTGCCTGCCT...GAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| 3UTR CAA 72 bp | TGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTaGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WPLWKDESQPCE*GFGFLAPARSP Trigger: AGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | GAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAGAATCTGTGTGGCCTaGGGACGGGAGTTTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: ELGFGFLAPARSPGSVTGRICVA*GREFGE Trigger: TTCTCCAAACTCCCGTCCCCAGGCCACACAGATTCT...CCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTCGGCTTCTTAGCCGAAGGTCGTGCACACTaGGCTTCTGTCCGCACACTT | + |
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Preference number: 4 (lower is better) Translates to: PLWKDESQPCELGFGFLAEGRAH*ASVRTL Trigger: AAGTGTGCGGACAGAAGCCCAGTGTGCACGACCTTC...GGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | GAGAGTCAGCCCTGTGAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTAATGCATGCCAGGATTaGCAGGTTCAGACCTACTGC | + |
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Preference number: 4 (lower is better) Translates to: ESQPCELGFGFLAPARSPNACQD*QVQTYC Trigger: GCAGTAGGTCTGAACCTGTCAATCCTGGCATGCATT...AGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | GGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGTATCCGAGAAGGTCGTaGACACTGGGCTTCTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GQVHRTTGPFGRMRVSPVYPRRS*TLGFCP Trigger: CGGACAGAAGCCCAGTGTGCACGACCTTCTCGGATA...CACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCACAGGGGTGGACAAGTaGACAGAACAACTGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SPSQISWFSHREIHLGPCTGVDK*TEQLAP Trigger: AGGGGCCAGTTGTTCTGTGCACTTGTCCACCCCTGT...GCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | AGGGGTGGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCTGGGGACGGGAGTTTaGAGAAGATTGAGGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: RGGQVHRTTGPFGRMRVSLGTGV*RRLRRA Trigger: AGCCCTCCTCAATCTTCTCCAAACTCCCGTCCCCAG...GCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCCACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTCGGCTTCTTAGCCAGCATCCATTCCGTCTaGTACCACATGTCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLWKDESQPCELGFGFLASIHSV*YHMSTR Trigger: CCTGGTGGACATGTGGTACCAGACGGAATGGATGCT...GGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | GGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGGTGAACAAGGCACTCTaGGTCCCTTGGTGGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: GQVHRTTGPFGRMRVSPVVNKAL*VPWWLV Trigger: TACCAGCCACCAAGGGACCCAGAGTGCCTTGTTCAC...CACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCCTGAGTCCTCAGGATTaGAGGGAATGCTCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SPSQISWFSHREIHLGPCLSPQD*RECSGR Trigger: TCTCCCTGAGCATTCCCTTCAATCCTGAGGACTCAG...GCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | GCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTCCATGTGGGCACCATaGATTGCTGCATCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: AQNNWPLWKDESQPCELGSMWAP*IAASPS Trigger: AGATGGAGATGCAGCAATGCATGGTGCCCACATGGA...GCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCACTGGAGAGTCCATGTaGGCACCATGCATTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SPSQISWFSHREIHLGPCTGESM*APCIAA Trigger: TGCAGCAATGCATGGTGCCCACATGGACTCTCCAGT...GCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | AGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGTCCCTGTGCACAAAGTaGGGTATGCCAGCAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SAQNNWPLWKDESQPCELSLCTK*GMPAGL Trigger: CAACCCTGCTGGCATACCCCACTTTGTGCACAGGGA...CAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CCCTGTGAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCCACACTGTTGGTTCATaGCCAGCTTTATCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PCELGFGFLAPARSPGSVHTVGS*PALSAP Trigger: TGGAGCAGATAAAGCTGGCCATGAACCAACAGTGTG...GACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CCCTGTGAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCTGGAGTTTATGTTGCTaGAGGTATCCGAGAAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: PCELGFGFLAPARSPGSVWSLCC*RYPRRS Trigger: CGACCTTCTCGGATACCTCCAGCAACATAAACTCCA...GACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATGGGTCCCTTGGTGGCTaGTATCCCGCACAAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LRLLSPSQISWFSHREIHGSLGG*YPAQRA Trigger: AGCTCTTTGTGCGGGATACCAGCCACCAAGGGACCC...ATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | AGGGGTGGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCAACAACTGGCCCCTTTaGAAGGATGAGAGTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RGGQVHRTTGPFGRMRVSNNWPL*KDESQP Trigger: GGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTT...GCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCCACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | TTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCCTGCTCCACCTTTTCTaGCTTCAGCTCCCTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: FGFLAPARSPGSVTGKYILLHLF*LQLPVH Trigger: GTGCACAGGGAGCTGAAGTCAGAAAAGGTGGAGCAG...GATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | GGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATAGAACATGAGGAGCTCTaGCGTAGTCACACTGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GLRLLSPSQISWFSHREIEHEEL*RSHTGC Trigger: ACAACCAGTGTGACTACGTCAGAGCTCCTCATGTTC...TATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | CCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCAAGGTTGCTCTGGGTGACTaGTGGCCATCCAGGCATAAT | + |
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Preference number: 4 (lower is better) Translates to: PSQISWFSHREIHLGPCKVALGD*WPSRHN Trigger: ATTATGCCTGGATGGCCAGCAGTCACCCAGAGCAAC...CTTGCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTGGGAGTGTATCTTACTaGAGAGTCCATGTGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: QVHRTTGPFGRMRVSPVSGSVSY*RVHVGT Trigger: GGTGCCCACATGGACTCTCCAGTAAGATACACTCCC...ACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGGGTATGTTCTCTTCATaGACGTCCAGGGAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLSPSQISWFSHREIHLGGMFSS*TSREAA Trigger: GGCTGCCTCCCTGGACGTCCATGAAGAGAACATACC...CCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | GGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGCACATAAAGTTGCTCTaGGTGACTGCTGGCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: GQVHRTTGPFGRMRVSPVHIKLL*VTAGHP Trigger: TGGATGGCCAGCAGTCACCCAGAGCAACTTTATGTG...CACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCTCTCCATCTTGCTGCTaGTGGGATGAAGAATGCATG | + |
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Preference number: 4 (lower is better) Translates to: SPSQISWFSHREIHLGPCSPSCC*WDEECM Trigger: CATGCATTCTTCATCCCATCAGCAGCAAGATGGAGA...GCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | TTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCGTGGGCACCATGCATTaGTGCATCTCCATCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FGFLAPARSPGSVTGKYIVGTMH*CISILL Trigger: CAGCAAGATGGAGATGCAGCAATGCATGGTGCCCAC...GATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | TTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAACTTGTCCATCTCCCCTaGAGACATCACTGTAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LGFGFLAPARSPGSVTGKLVHLP*RHHCRY Trigger: ATACCTACAGTGATGTCTGCAGGGGAGATGGACAAG...TTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | GGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATAGGATGGAGTTTATGTTaGTGGAGGTATCCGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GLRLLSPSQISWFSHREIGWSLC*WRYPRR Trigger: CCTTCTCGGATACCTCCAGCAACATAAACTCCATCC...TATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | AGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGCGCACACTTCTCTCCTaGCTCTATCCCTTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: SAQNNWPLWKDESQPCELRTLLS*LYPFPL Trigger: AAGTGGAAAGGGATAGAGCCAGGAGAGAAGTGTGCG...CAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | GCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCCAGGGAAATACATCTTaGGCCATGCAAGAACATGAG | + |
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Preference number: 4 (lower is better) Translates to: AQNNWPLWKDESQPCELGQGNTS*AMQEHE Trigger: CTCATGTTCTTGCATGGCCCAAGATGTATTTCCCTG...GCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCAAGCCCAGCCAGATCTCCTaGTTCAGTCACAGGGAAATA | + |
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Preference number: 4 (lower is better) Translates to: PSQISWFSHREIHLGPCKPSQIS*FSHREI Trigger: TATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGG...CTTGCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCAAGTTGCTGCTGATGGGATaGAGAATGCATGCCAGGATT | + |
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Preference number: 4 (lower is better) Translates to: PSQISWFSHREIHLGPCKLLLMG*RMHARI Trigger: AATCCTGGCATGCATTCTTCATCCCATCAGCAGCAA...CTTGCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR TCA 90 bp | CCCTGTGAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCCACCATACTTTATTGTaGAAAGGAACAGAGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: PCELGFGFLAPARSPGSVHHTLL*KGTEIL Trigger: CAGGATCTCTGTTCCTTTTCACAATAAAGTATGGTG...GACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | CAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTCCTCTCTGGAGGTTTTTaGTCTCTCTCCATGTTAACG | + |
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Preference number: 4 (lower is better) Translates to: QNNWPLWKDESQPCELGFLSGGF*SLSMLT Trigger: CGTTAACATGGAGAGAGAGCAAAAACCTCCAGAGAG...GAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | GGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGATGGCCAGCTTTATCTaGTCCACCTTTTCTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: GQVHRTTGPFGRMRVSPVMASFI*STFSDF Trigger: GAAGTCAGAAAAGGTGGAGCAGATAAAGCTGGCCAT...CACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR GCA 90 bp | TTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACTGCTGCAGGAATTaGAGGACCAGATTCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: LGFGFLAPARSPGSVTGKYCCRN*RTRFFN Trigger: GTTGAAGAATCTGGTCCTGCAATTCCTGCAGCAGTA...TTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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| CDS-3UTR CCA 90 bp | TTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAAATAGTGAAACTCAACTaGGACGAAGGGTACACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGFGFLAPARSPGSVTGKIVKLN*DEGYTA Trigger: TGCAGTGTACCCTTCGTCCCAGTTGAGTTTCACTAT...TTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CCA 90 bp | TTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCAGTGCACAGAACAACTaGCCCCTTTGGAAGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGFLAPARSPGSVTGKYISAQNN*PLWKDE Trigger: CTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACT...GATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCTTTCCGATTATAGGGTaGAATAGTATAGGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PCELGFGFLAPARSPGSVFPIIG*NSIGSV Trigger: TACACTCCCTATACTATTTCACCCTATAATCGGAAA...GACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR GCA 90 bp | GCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCCTTTCTAGGATTCGATaGCATCTTAGTATCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AQNNWPLWKDESQPCELGLSRIR*HLSITV Trigger: AACCGTGATACTAAGATGGCATCGAATCCTAGAAAG...GCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTCGGCTTCTTAGCCTCTCCACAAAGAAGCTaGCATGCATGTTTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLWKDESQPCELGFGFLASPQRS*HACFHS Trigger: ACTATGAAAACATGCATGCCAGCTTCTTTGTGGAGA...GGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTATATCAAGAGCTTCCTaGGAGACATCACACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVHRTTGPFGRMRVSPVSISRAS*ETSHCW Trigger: CCAACAGTGTGATGTCTCCCAGGAAGCTCTTGATAT...ACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR TCA 90 bp | GGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGGTATGCCAGCAGGGTTaGCAAAGATTGATATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQVHRTTGPFGRMRVSPVVCQQG*QRLISF Trigger: AAAAGATATCAATCTTTGTCAACCCTGCTGGCATAC...CACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGTGGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCTTGTTTACGAAAACTaGCTTTCCGATTATAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGGQVHRTTGPFGRMRVSLVYEN*LSDYRV Trigger: CACCCTATAATCGGAAAGGCAGTTTTCGTAAACAAG...GCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCCACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCGGACGAAGGGTACACTaGATTCATTCTGAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPSQISWFSHREIHLGPCGRRVH*IHSESN Trigger: ATTTGATTCAGAATGAATGCAGTGTACCCTTCGTCC...GCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CCA 90 bp | CTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATGGAACAATTCCAGGATaGAGTTTATGTTGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLLSPSQISWFSHREIHGTIPG*SLCCWR Trigger: CCTCCAGCAACATAAACTCCATCCTGGAATTGTTCC...ATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCAAGGTTGGTAACCTCTTGTaGGCTTCAGTACCACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSQISWFSHREIHLGPCKVGNLL*ASVPHK Trigger: TTTATGTGGTACTGAAGCCCACAAGAGGTTACCAAC...CTTGCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATAATGTTAACGTGGGTTTaGTCTTGTTTACGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLRLLSPSQISWFSHREIMLTWV*SCLRKL Trigger: CAGTTTTCGTAAACAAGACCAAACCCACGTTAACAT...TATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | GGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGGGCACTCTGGGTCCCTaGGTGGCTGGTATCCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQVHRTTGPFGRMRVSPVGTLGP*VAGIPH Trigger: GTGCGGGATACCAGCCACCAAGGGACCCAGAGTGCC...CACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS GCA 90 bp | GCTGTCCTCCTCATGGGAGCAATCACACCTACGTCAGAGACACAGTaGAGTGTGTCCACCTACACTCCGAAGTTCCTGCCTCTGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AVLLMGAITPTSETQ*SVSTYTPKFLPLQP Trigger: GGGCTGCAGAGGCAGGAACTTCGGAGTGTAGGTGGACACACTGCACTGTGTCTCTGACGTAGGTGTGATTGCTCCCATGAGGAGGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497850.5 |
||
| CDS-3UTR CAA 90 bp | ACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTCGGCTTCTAGTCAGCCCTGTGAGTaGGGCTTCGGCTTCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGPFGRMRVSPVSWASASSQPCE*GFGFLA Trigger: GGCTAAGAAGCCGAAGCCCAACTCACAGGGCTGACT...AGAAGCCGAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS CCA 90 bp | CGAGAAGGTCGTGCACACTGGGCTTCTGTCCGCACACTTCTCTCCTaGCTCTATCCCTTTCCACTTGTCCATCTCCCCTGCAGACATCAC | + |
|
Preference number: 5 (lower is better) Translates to: REGRAHWASVRTLLS*LYPFPLVHLPCRHH Trigger: GTGATGTCTGCAGGGGAGATGGACAAGTGGAAAGGGATAGAGCCAGGAGAGAAGTGTGCGGACAGAAGCCCAGTGTGCACGACCTTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000395065.8 ENST00000427570.1 ENST00000460791.1 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGCCATGCAAGCCTGGGGACGGGAGTTaGGAGAAGATTGAGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSQISWFSHREIHLGPCKPGDGS*EKIEEG Trigger: GCCCTCCTCAATCTTCTCCAAACTCCCGTCCCCAGG...CTTGCATGGCCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | GCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTGTGGGCACCATGCATaGCTGCATCTCCATCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AQNNWPLWKDESQPCELGCGHHA*LHLHLA Trigger: AGCAAGATGGAGATGCAGCAATGCATGGTGCCCACA...GCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGTGAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCCAGGTTGGTAACCTCTaGTGGGCTTCAGTACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PCELGFGFLAPARSPGSVQVGNL*WASVPH Trigger: ATGTGGTACTGAAGCCCACAAGAGGTTACCAACCTG...GACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGTGAGTTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCAGGATGGAGTTTATGTaGCTGGAGGTATCCGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PCELGFGFLAPARSPGSVRMEFM*LEVSEK Trigger: CTTCTCGGATACCTCCAGCAACATAAACTCCATCCT...GACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAACTCACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTGCTGAGTCCTCAGGATaGAAGGGAATGCTCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QVHRTTGPFGRMRVSPVSAESSG*KGMLRE Trigger: CTCCCTGAGCATTCCCTTCAATCCTGAGGACTCAGC...ACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS GCA 90 bp | AGGGTACAACTGACTTTATGTTGCTGGAGGTATCCGAGAAGGTCGTaGACACTGGGCTTCTGTCCGCACACTTCTCTCCTGGCTCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: RVQLTLCCWRYPRRS*TLGFCPHTSLLALS Trigger: GGATAGAGCCAGGAGAGAAGTGTGCGGACAGAAGCCCAGTGTGCACGACCTTCTCGGATACCTCCAGCAACATAAAGTCAGTTGTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460791.1 |
||
| CDS-3UTR CAA 90 bp | ACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGGGCTTCGGCTTCTGGAGACATCACACTGTaGGTTCATGGCCAGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TGPFGRMRVSPVSWASASGDITL*VHGQLY Trigger: ATAAAGCTGGCCATGAACCAACAGTGTGATGTCTCC...AGAAGCCGAAGCCCAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | TTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCCAGTACCACATAAAGTaGCTCTGGGTGACTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FGFLAPARSPGSVTGKYIQYHIK*LWVTAG Trigger: GCCAGCAGTCACCCAGAGCAACTTTATGTGGTACTG...GATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGTGGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCTCTCTCTGGAGGTTTTaGCTCTCTCTCCATGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RGGQVHRTTGPFGRMRVSSLWRF*LSLHVN Trigger: GTTAACATGGAGAGAGAGCAAAAACCTCCAGAGAGA...GCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATCTTGGGAAGGGAACTGTGATCTaGAACCAGCTCCCTAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSPSQISWFSHREIHLGKGTVI*NQLPKV Trigger: GACCTTAGGGAGCTGGTTCAAGATCACAGTTCCCTT...CCCAAGATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | CTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAATACATAGCTTCCCTTACAGGTaGGTAACCTCTTGTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRLLSPSQISWFSHREIHSFPYR*VTSCGL Trigger: AAGCCCACAAGAGGTTACCAACCTGTAAGGGAAGCT...ATGTATTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS CCA 90 bp | ACAAAATGGACAACGGTAAGTGAAACTGTGGAGCTGTCCTCCTCATaGGAGCAATCACACCTACGTCAGAGACACAGTGCAGTGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKWTTVSETVELSSS*EQSHLRQRHSAVCP Trigger: TGGACACACTGCACTGTGTCTCTGACGTAGGTGTGATTGCTCCCATGAGGAGGACAGCTCCACAGTTTCACTTACCGTTGTCCATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000494300.1 ENST00000497850.5 |
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| CDS-3UTR CAA 90 bp | GGACAAGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGTCTTCTTTGAACAACTaGATCAGTGTGACCCGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GQVHRTTGPFGRMRVSPVSSLNN*ISVTRS Trigger: ACTACGGGTCACACTGATCAAGTTGTTCAAAGAAGA...CACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS TCA 90 bp | TCACAGGGAAATACATCTTGGGCCATGCAAGAACATGAGGAGCTCTaGCGTAGTCACACTGGTTGTTACGAAGGCAGCATTTTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQGNTSWAMQEHEEL*RSHTGCYEGSIFCC Trigger: GCAGCAGAAAATGCTGCCTTCGTAACAACCAGTGTGACTACGTCAGAGCTCCTCATGTTCTTGCATGGCCCAAGATGTATTTCCCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395065.8 ENST00000497850.5 |
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| CDS-3UTR CAA 90 bp | TTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAAACATCTTGCTCTTCTTaGAACAACTTGATCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGFGFLAPARSPGSVTGKTSCSS*NNLISV Trigger: CACACTGATCAAGTTGTTCAAAGAAGAGCAAGATGT...TTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGCTTCGGCTTCTTAGCCCCAGCCAGATCTCCTGGTTCAGTCACAGGGAAACATGTTAACGTGGGTTaGGTCTTGTTTACGAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LGFGFLAPARSPGSVTGKHVNVG*VLFTKT Trigger: AGTTTTCGTAAACAAGACCAAACCCACGTTAACATG...TTTCCCTGTGACTGAACCAGGAGATCTGGCTGGGGCTAAGAAGCCGAAGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGAGCAGCCACTTCTCATaGTATTTTATGCCAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAQNNWPLWKDESQPCELSSHFS*YFMPKG Trigger: TCCCTTTGGCATAAAATACAATGAGAAGTGGCTGCT...CAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCACAGAACAACTGGCCCCTTTGGAAGGATGAGAGTCAGCCCTGTGAGTTGACTGCTAAATCTCCTTaGGTAAATATCCCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: SAQNNWPLWKDESQPCELTAKSP*VNIPTS Trigger: AGATGTTGGGATATTTACCAAAGGAGATTTAGCAGT...CAACTCACAGGGCTGACTCTCATCCTTCCAAAGGGGCCAGTTGTTCTGTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395065.8 |
||
| CDS CCA 72 bp | GAGAAGGCTGTGGGCACTAGGGTGAACAAGGCACTCTaGGTCCCTTGGTGGCTGGTATCCCGCACAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: EKAVGTRVNKAL*VPWWLVSRTKS Trigger: GCTCTTTGTGCGGGATACCAGCCACCAAGGGACCCAGAGTGCCTTGTTCACCCTAGTGCCCACAGCCTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000395065.8 ENST00000468528.5 ENST00000497850.5 |
||
| CDS CAA 90 bp | AGGTCAGGGTCCCAGGTGGTGACAGAGGGTACAACTGACTTTATGTaGCTGGAGGTATCCGAGAAGGTCGTGCACACTGGGCTTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSGSQVVTEGTTDFM*LEVSEKVVHTGLLS Trigger: GGACAGAAGCCCAGTGTGCACGACCTTCTCGGATACCTCCAGCAACATAAAGTCAGTTGTACCCTCTGTCACCACCTGGGACCCTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460791.1 |
||
| CDS GCA 72 bp | TGGAGTTTATGTTGCTGGAGGTATCCGAGAAGGTCGTaGACACTGGGCTTCTGTCCGCACACTTCTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: WSLCCWRYPRRS*TLGFCPHTSLL Trigger: CAGGAGAGAAGTGTGCGGACAGAAGCCCAGTGTGCACGACCTTCTCGGATACCTCCAGCAACATAAACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000395065.8 ENST00000427570.1 |
||
| CDS GCA 72 bp | CTGACTTTATGTTGCTGGAGGTATCCGAGAAGGTCGTaGACACTGGGCTTCTGTCCGCACACTTCTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTLCCWRYPRRS*TLGFCPHTSLL Trigger: CAGGAGAGAAGTGTGCGGACAGAAGCCCAGTGTGCACGACCTTCTCGGATACCTCCAGCAACATAAAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460791.1 |
||
| CDS GCA 72 bp | CTCATGGGAGCAATCACACCTACGTCAGAGACACAGTaGAGTGTGTCCACCTACACTCCGAAGTTCCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LMGAITPTSETQ*SVSTYTPKFLP Trigger: AGGCAGGAACTTCGGAGTGTAGGTGGACACACTGCACTGTGTCTCTGACGTAGGTGTGATTGCTCCCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497850.5 |
||
| CDS CCA 72 bp | TATGTTGCTGGAGGTATCCGAGAAGGTCGTGCACACTaGGCTTCTGTCCGCACACTTCTCTCCTGGCTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: YVAGGIREGRAH*ASVRTLLSWLY Trigger: ATAGAGCCAGGAGAGAAGTGTGCGGACAGAAGCCCAGTGTGCACGACCTTCTCGGATACCTCCAGCAACATA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000395065.8 ENST00000427570.1 ENST00000460791.1 |
||
| CDS CAA 72 bp | TCCCAGGTGGTGACAGAGGGTACAACTGACTTTATGTaGCTGGAGGTATCCGAGAAGGTCGTGCACACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQVVTEGTTDFM*LEVSEKVVHTG Trigger: CCCAGTGTGCACGACCTTCTCGGATACCTCCAGCAACATAAAGTCAGTTGTACCCTCTGTCACCACCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460791.1 |
||
| CDS CAA 90 bp | TCCTCATGCACCACCCTGCTGGATCCTCTCTTCTCACCTTACAGGTaGGTAACCTCTTGTGGGCTTCAGTACCACATAAAGTTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCTTLLDPLFSPYR*VTSCGLQYHIKLLW Trigger: CCAGAGCAACTTTATGTGGTACTGAAGCCCACAAGAGGTTACCAACCTGTAAGGTGAGAAGAGAGGATCCAGCAGGGTGGTGCATGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497850.5 |
||
| CDS CCA 72 bp | ACAACGGTAAGTGAAACTGTGGAGCTGTCCTCCTCATaGGAGCAATCACACCTACGTCAGAGACACAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TTVSETVELSSS*EQSHLRQRHSA Trigger: TGCACTGTGTCTCTGACGTAGGTGTGATTGCTCCCATGAGGAGGACAGCTCCACAGTTTCACTTACCGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000494300.1 ENST00000497850.5 |
||
| CDS CAA 72 bp | ACCACCCTGCTGGATCCTCTCTTCTCACCTTACAGGTaGGTAACCTCTTGTGGGCTTCAGTACCACATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TTLLDPLFSPYR*VTSCGLQYHIK Trigger: CTTTATGTGGTACTGAAGCCCACAAGAGGTTACCAACCTGTAAGGTGAGAAGAGAGGATCCAGCAGGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497850.5 |
||
| CDS CAA 72 bp | TCTCCTTTGGTAAATATCCCAACATCTTGCTCTTCTTaGAACAACTTGATCAGTGTGACCCGTAGTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPLVNIPTSCSS*NNLISVTRSVS Trigger: GGACACACTACGGGTCACACTGATCAAGTTGTTCAAAGAAGAGCAAGATGTTGGGATATTTACCAAAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395065.8 |
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