RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NWD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000174145

Ensembl transcript IDs: ENST00000309447.6

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAAAAGCATAGACTCATATAATCAACTCCAGGTGATCTGTATGTaGTTTGCCTTCTCTGGGCTACCACCTCCCTGGCTAGTAGCTAAA +
Preference number: 1 (lower is better)
Translates to: LKSIDSYNQLQVICM*FAFSGLPPPWLVAK
Trigger: TTTAGCTACTAGCCAGGGAGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATATGAGTCTATGCTTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR TCA 90 bp AATGTGAGTAAGGCAAACGTCATCAGTATCTCAGAGATGGCATGTTaGGAAAGCTTGCTTTCTATGAAGACTAACTGCAGGAATTTAGGG +
Preference number: 1 (lower is better)
Translates to: NVSKANVISISEMAC*ESLLSMKTNCRNLG
Trigger: CCCTAAATTCCTGCAGTTAGTCTTCATAGAAAGCAAGCTTTCTCAACATGCCATCTCTGAGATACTGATGACGTTTGCCTTACTCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR GCA 90 bp AAAAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTaGAACTGTCTTTTAATAAAGACTGACTCTCCATGTTCAGTAGCC +
Preference number: 1 (lower is better)
Translates to: KNHIFCYTETLACNC*NCLLIKTDSPCSVA
Trigger: GGCTACTGAACATGGAGAGTCAGTCTTTATTAAAAGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR GCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCAGTGGGATGTATTATaGTGCCTCACCACACAGCTA +
Preference number: 2 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMQWDVL*CLTTQL
Trigger: TAGCTGTGTGGTGAGGCAGCATAATACATCCCACTG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR TCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTGAAAGAGAAGGAATGTaGGTAAGGCAAACGTCATCA +
Preference number: 2 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPEREGM*VRQTSS
Trigger: TGATGACGTTTGCCTTACTCACATTCCTTCTCTTTC...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTACAGAAACCCTCGCATaGAATTGTTGCAACTGTCTT +
Preference number: 2 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPTETLA*NCCNCL
Trigger: AAGACAGTTGCAACAATTGCATGCGAGGGTTTCTGT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR CCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTTCTCATCTTAACCAGTaGGATGTATTATGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPSHLNQ*DVLCCL
Trigger: GAGGCAGCATAATACATCCCACTGGTTAAGATGAGA...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGATCTTAATAAAACACTaGAATTCCAGCATCGCTCCT +
Preference number: 2 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMILIKH*NSSIAP
Trigger: AGGAGCGATGCTGGAATTCCAGTGTTTTATTAAGAT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR CCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTTTTCCCTTCTGTACGTaGATCACATATTTCTGCTTA +
Preference number: 2 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPFPFCT*ITYFCL
Trigger: TAAGCAGAAATATGTGATCCACGTACAGAAGGGAAA...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR CAA 90 bp AGTCTCATGTTTCAGGTCATATCTCTCGGGAAACTGGGAATACACTaGGGTATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTG +
Preference number: 2 (lower is better)
Translates to: SLMFQVISLGKLGIH*GIFVTYFAPLDRSL
Trigger: CAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGACCTGAAACATGAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR TCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACATTCTGGATACACTTTaGCAAAAAGACCACACCCAA +
Preference number: 2 (lower is better)
Translates to: TDNDRNENVLPKELKSIDILDTL*QKDHTQ
Trigger: TTGGGTGTGGTCTTTTTGTCAAAGTGTATCCAGAAT...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR GCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATTGGGATGTATTATGCTaGCTCACCACACAGCTAATT +
Preference number: 2 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNWDVLC*LTTQLI
Trigger: AATTAGCTGTGTGGTGAGGCAGCATAATACATCCCA...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR CCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTTATCTCTCGGGAAACTaGGAATACACTTGGGTATTT +
Preference number: 2 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSYLSGN*EYTWVF
Trigger: AAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATA...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR CCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAAAGAAGCATACAGATaGTGTGTAGAAGTAAGAAAG +
Preference number: 2 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHKEAYR*CVEVRK
Trigger: CTTTCTTACTTCTACACACCATCTGTATGCTTCTTT...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR GCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATATTTGGTCATCTATCTaGATTTTACACAGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNIWSSI*ILHRKE
Trigger: CTCTTTCCTGTGTAAAATGCAGATAGATGACCAAAT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR CCA 72 bp ATAGACTCATATAATCAACTCCAGGTGATCTGTATGTaGTTTGCCTTCTCTGGGCTACCACCTCCCTGGCTA +
Preference number: 3 (lower is better)
Translates to: IDSYNQLQVICM*FAFSGLPPPWL
Trigger: TAGCCAGGGAGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATATGAGTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR CCA 72 bp TCTGTATATAACTCTAGCCTCTCTCATCTTAACCAGTaGGATGTATTATGCTGCCTCACCACACAGCTAATT +
Preference number: 3 (lower is better)
Translates to: SVYNSSLSHLNQ*DVLCCLTTQLI
Trigger: AATTAGCTGTGTGGTGAGGCAGCATAATACATCCCACTGGTTAAGATGAGAGAGGCTAGAGTTATATACAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR CAA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACCCTCGCATGCAATTGTaGCAACTGTCTTTTAATAAA +
Preference number: 3 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHPRMQL*QLSFNK
Trigger: TTTATTAAAAGACAGTTGCAACAATTGCATGCGAGG...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR-3UTR CAA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACAAGTGTGGATACCTTTaGAAAAGTTATCCAAGGACA +
Preference number: 3 (lower is better)
Translates to: TDNDRNENVLPKELKSIDKCGYL*KSYPRT
Trigger: TGTCCTTGGATAACTTTTCAAAAGGTATCCACACTT...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR TCA 72 bp CTGAAGTTTTTCTTATACTGCTTCCCAATGTCCCTATaGGGGCTACAGCAGAAACTATCACTATCTTTATTT +
Preference number: 3 (lower is better)
Translates to: LKFFLYCFPMSL*GLQQKLSLSLF
Trigger: AAATAAAGATAGTGATAGTTTCTGCTGTAGCCCTCATAGGGACATTGGGAAGCAGTATAAGAAAAACTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR TCA 72 bp AAAACATCTTTCACTATGGACCTGGGTATTTTTATCTaGATCACATCTTTGAACGCTTACATGTTAAACTGC +
Preference number: 3 (lower is better)
Translates to: KTSFTMDLGIFI*ITSLNAYMLNC
Trigger: GCAGTTTAACATGTAAGCGTTCAAAGATGTGATTCAGATAAAAATACCCAGGTCCATAGTGAAAGATGTTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGGGTCTCCTGCCCTTCTaGGCCTCCGCCTTCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMGLLPF*ASAFAR
Trigger: GCGGGCGAAGGCGGAGGCCCAGAAGGGCAGGAGACC...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTGGGAGGAACAGCCACTaGCGCCGCCGCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPGRNSH*RRRHLL
Trigger: CAGGAGGTGGCGGCGGCGGCAGTGGCTGTTCCTCCC...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCGAGCAGCAGCCAGCTaGAGCGGGAGGTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMRAAAS*SGRSAW
Trigger: CCACGCTGACCTCCCGCTCCAGCTGGCTGCTGCTCG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGAGCCCGAAGCGCCTTTaGCGAGCTCCGTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMSPKRL*RAPWRT
Trigger: TGTGCGCCACGGAGCTCGCCAAAGGCGCTTCGGGCT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGGGCCACATCGCCCTCTaGGAGGAACAGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMGHIAL*EEQPLP
Trigger: CGGCAGTGGCTGTTCCTCCCAGAGGGCGATGTGGCC...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAGCGGGAGGTCAGCGTaGCGGCGGCTACGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHSGRSA*RRLRAQ
Trigger: CTGCGCGCGTAGCCGCCGCCACGCTGACCTCCCGCT...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTACCTCTGCCGCCAGATaGTCCCAGAGGCGTGAACCA +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPTSAAR*SQRREP
Trigger: TGGTTCACGCCTCTGGGATCATCTGGCGGCAGAGGT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACGTCGCGGCGGTCTCCTaGCCTTCTGGGCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNVAAVS*PSGPPP
Trigger: AGGCGGAGGCCCAGAAGGGCAGGAGACCGCCGCGAC...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAGACAGGGCAGCTTGGTaGCCGCGCCGGCCGGCCACA +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTDRAAW*PRRPAT
Trigger: TGTGGCCGGCCGGCGCGGGCACCAAGCTGCCCTGTC...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCCCAGGATGACAGACTaGGCTGTGGTGATTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMPRMTD*AVVICL
Trigger: CAGGCAAATCACCACAGCCCAGTCTGTCATCCTGGG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGATAGCTTCTGGGCTATaGGCTGCAGGTGTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMIASGL*AAGVCW
Trigger: CCAACAGACACCTGCAGCTCATAGCCCAGAAGCTAT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACTGCTCCTCGGGTTCCTaGCCGCAGCTCCACGGAACG +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHCSSGS*PQLHGT
Trigger: CGTTCCGTGGAGCTGCGGGCAGGAACCCGAGGAGCA...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATCTTTGGCGAGCTCCGTaGCGCACAGCACCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNLWRAP*RTAPAG
Trigger: GCCGGCGGGTGCTGTGCGCCACGGAGCTCGCCAAAG...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAGAGAGGGCAGGGCCGTaGGGTTCCCAGAGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTERAGP*GSQRKP
Trigger: CGGCTTTCTCTGGGAACCTCACGGCCCTGCCCTCTC...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTAGTGCCTCACCTCCCTaGAGGTCAGGTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPSASPP*RSGSQT
Trigger: TGTTTGTGAACCTGACCTTCAGGGAGGTGAGGCACT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGGATCTGTATGTGGTTTaGCTTCTCTGGGCTACCACC +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMDLYVV*LLWATT
Trigger: GGTGGTAGCCCAGAGAAGGCAAACCACATACAGATC...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTTCTGAGGTAATAGGCTaGTGGCACCGAGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPSEVIG*WHRVLI
Trigger: GATGAGAACTCGGTGCCAGCAGCCTATTACCTCAGA...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTAAGTCATCAGTCAGCTaGGGGCTGGAAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPKSSVS*GLEMSS
Trigger: TGAGGACATTTCCAGCCCCCAGCTGACTGATGACTT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATACAAAGCGGGGCAGGTaGGCTGGGAGCCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNTKRGR*AGSHQS
Trigger: GCTTTGGTGGCTCCCAGCTCACCTGCCCCGCTTTGT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGCAGCAGCTGGTGTTTaGGGACCTGGCTGCACATCT +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICAAAGV*GPGCTS
Trigger: AGATGTGCAGCCAGGTCCTCAAACACCAGCTGCTGC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGATAAATCTGCTGGCCTaGTGTGACCTTCCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMINLLA*CDLPFD
Trigger: GTCAAAAGGAAGGTCACATCAGGCCAGCAGATTTAT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACAGAAGGCTTTCCTCCTaGCCCCTGACCAAACCCCCA +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDRRLSS*PLTKPP
Trigger: TGGGGGTTTGGTCAGGGGGCAGGAGGAAAGCCTTCT...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACGGCTGGTCTGGAGCCTaGCTGTCAAAGGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDGWSGA*LSKEAC
Trigger: ACAGGCTTCCTTTGACAGGCAGGCTCCAGACCAGCC...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTGCTGGCTTCGAGCCATaGAAGGGCGTGGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSAGFEP*KGVVGG
Trigger: TCCGCCAACCACGCCCTTGCATGGCTCGAAGCCAGC...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACTCCCGAGACAACCTCTaGCGCCAGATGATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHSRDNL*RQMIPE
Trigger: CTCTGGGATCATCTGGCGGCAGAGGTTGTCTCGGGA...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTGCGGGGCAGGTGAGCTaGGAGCCACCAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSAGQVS*EPPKLP
Trigger: AGGAAGCTTTGGTGGCTCCCAGCTCACCTGCCCCGC...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTTTGACGCGCAGCAGCTaGTGTTTGAGGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICLTRSS*CLRTWL
Trigger: CAGCCAGGTCCTCAAACACCAGCTGCTGCGCGTCAA...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACTGGAAAACCCAGGGCTaGTCTGGAGCCTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHWKTQG*SGACLS
Trigger: TGACAGGCAGGCTCCAGACCAGCCCTGGGTTTTCCA...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTCCACACCTCGTCAAGTaGTACAACAGCTCAGACATT +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPPHLVK*YNSSDI
Trigger: AATGTCTGAGCTGTTGTACCACTTGACGAGGTGTGG...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACTGCTGCGGAGGGTGTTaGCCAGGAACTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNCCGGC*PGTSAP
Trigger: AGGAGCTGAAGTTCCTGGCCAACACCCTCCGCAGCA...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATAGACCCTGTGGCCTGTaGCGAGCCTCCAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNRPCGL*RASKPW
Trigger: CCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCT...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACATGTTGCAGACCCTGTaGCCTGTGGCGAGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDMLQTL*PVASLQ
Trigger: TTGGAGGCTCGCCACAGGCCACAGGGTCTGCAACAT...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGTGTTACACTTTGGCCTaGAGGTGTGTGTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMCYTLA*RCVLHC
Trigger: ACAATGCAACACACACCTCCAGGCCAAAGTGTAACA...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGTGGTTTGCCTTCTCTaGGCTACCACCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICVVCLL*ATTSLA
Trigger: AGCCAGGGAGGTGGTAGCCCAGAGAAGGCAAACCAC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTTTCTGGGCTATGAGCTaGAGGTGTCTGTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICFWAMS*RCLLAQ
Trigger: CTGGGCCAACAGACACCTGCAGCTCATAGCCCAGAA...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTGCCTGTTCCATGAAGTaGTTTTCTTCCTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPACSMK*FSSSSK
Trigger: TTTGCTGGAGGAAGAAAAGCACTTCATGGAACAGGC...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGACAGAAACCCTCGCATaGAATTGTTGCAACTGTCTT +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMTETLA*NCCNCL
Trigger: AAGACAGTTGCAACAATTGCATGCGAGGGTTTCTGT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGAGTTATCCAAGGACATaGCGTAAGGAGGATATGGAA +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMSYPRT*RKEDME
Trigger: TTCCATATCCTCCTTACGGCATGTCCTTGGATAACT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACGGTCTTCTGGAGCTCTaGGCTGTCCCACTCATCTTC +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDGLLEL*AVPLIF
Trigger: GAAGATGAGTGGGACAGCCCAGAGCTCCAGAAGACC...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACATTCATGCGGGTCTTCTaGAGCTCTGGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTFMRVF*SSGLSH
Trigger: GTGGGACAGCCCAGAGCTCCAGAAGACCCGCATGAA...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTTTTATCAGCTTCTCTTaGGCTTCTGGGTCCCGAATA +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPFISFS*ASGSRI
Trigger: TATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAA...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGGTGTCCAGCTTTGCTTaGAAGAATGTAGTTATGCAC +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMVSSFA*KNVVMH
Trigger: GTGCATAACTACATTCTTCCAAGCAAAGCTGGACAC...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTAATCATTTCAAACTCTaGGGCTTCAACTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPNHFKL*GFNFSR
Trigger: CCTGGAGAAGTTGAAGCCTCAGAGTTTGAAATGATT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACTCATCGACGTCTTTGTaGGATCTCCAGTGCCTCACC +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNSSTSL*DLQCLT
Trigger: GGTGAGGCACTGGAGATCTCACAAAGACGTCGATGA...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTAGGCACCTTAGTTTCTaGAAGATCCCATGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPRHLSF*KIPCLL
Trigger: CAACAAACATGGGATCTTGCAGAAACTAAGGTGCCT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTTGGGCTGTGGTGATTTaGCTGAGTAGCTGTCGAGTC +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICWAVVI*LSSCRV
Trigger: GACTCGACAGCTACTCAGGCAAATCACCACAGCCCA...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACGTGGCGCTGCTTCCATaGTTGGTCCCCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDVALLP*LVPLIS
Trigger: AGAAATCAAGGGGACCAAGCATGGAAGCAGCGCCAC...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACTCACCACTGCTGGTGTaGCAGACATACTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDSPLLV*QTYWLL
Trigger: AAGCAGCCAGTATGTCTGGCACACCAGCAGTGGTGA...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACAAGTGGTCAGAATGTTaGAGACCCTGTGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDKWSEC*RPCGLW
Trigger: CCACAGGCCACAGGGTCTGCAACATTCTGACCACTT...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGAAGCACCGATATTTTTaGCATCTGCCAGTCTCATTA +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMKHRYF*HLPVSL
Trigger: TAATGAGACTGGCAGATGGCAAAAATATCGGTGCTT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTTTTCTTGGAGGGTGTTaGTTCATTGGACTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPFLGGC*FIGLSR
Trigger: TCTACTGAGTCCAATGAAGCAACACCCTCCAAGAAA...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTTGGGATGTATTATGCTaGCTCACCACACAGCTAATT +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPWDVLC*LTTQLI
Trigger: AATTAGCTGTGTGGTGAGGCAGCATAATACATCCCA...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACGAGGTAATAGGCTGCTaGCACCGAGTTCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNEVIGC*HRVLIS
Trigger: CGAGATGAGAACTCGGTGCCAGCAGCCTATTACCTC...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCCATTATATCTCCGGTaGATGTTAACACACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMPLYLR*MLTHSV
Trigger: AACACTGTGTGTTAACATCCACCGGAGATATAATGG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACGGTTTTCACCACTGCTaGTGTGCCAGACATACTGGC +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHGFHHC*CARHTG
Trigger: GCCAGTATGTCTGGCACACCAGCAGTGGTGAAAACC...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTCGAGCCTCCAAACCCTaGAGGCATTTTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICRASKP*RHFPHR
Trigger: TCTGTGAGGAAAATGCCTCCAGGGTTTGGAGGCTCG...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTAAGAGTTGTGTTTCTTaGAGGGTGTTGCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPKSCVS*RVLLHW
Trigger: CCAATGAAGCAACACCCTCCAAGAAACACAACTCTT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATCATAGCTGTGGCCCCTaGCTTCTAGGGCCGAGCATA +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNHSCGP*LLGPSI
Trigger: TATGCTCGGCCCTAGAAGCCAGGGGCCACAGCTATG...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCACTCTCAGATTAGATaGTGCAACAATAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMHSQIR*CNNSRN
Trigger: ATTCCTACTATTGTTGCATCATCTAATCTGAGAGTG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATTTGCTGAAGCTCTGCTaGAAGGGAGCCGGGAAATGC +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNLLKLC*KGAGKC
Trigger: GCATTTCCCGGCTCCCTTTCAGCAGAGCTTCAGCAA...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTGGCAGCAGTCTTTGCTaGAGCTCTGCTGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFGSSLC*SSAERE
Trigger: CTCCCTTTCAGCAGAGCTTCAGCAAAGACTGCTGCC...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTCTGAAAGCTCAATGCTaGCCACCTCACTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICLKAQC*PPHCLL
Trigger: GAGAAGACAGTGAGGTGGTCAGCATTGAGCTTTCAG...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGTCTTTTAATAAAGACTaGCTCTCCATGTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMSFNKD*LSMFSS
Trigger: GCTACTGAACATGGAGAGTCAGTCTTTATTAAAAGA...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTGGAATGAGAATGTGTTaGCTAAAGAGCTCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPGMRMC*LKSSKA
Trigger: TGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCC...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACGTTTGTTGGGCAGCGTaGAAAGGACTATCCGGACAA +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHVCWAA*KGLSGQ
Trigger: TTGTCCGGATAGTCCTTTCCACGCTGCCCAACAAAC...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACTGGTGTTTGAGGACCTaGCTGCACATCTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDWCLRT*LHIFLS
Trigger: AGACAGGAAGATGTGCAGCCAGGTCCTCAAACACCA...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATCCATCCAGGGAGCACTaGACGCACGTCACTTCATAC +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNPSREH*THVTSY
Trigger: GTATGAAGTGACGTGCGTCCAGTGCTCCCTGGATGG...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACACAGTCAGCTGGGGGCTaGAAATGTCCTCAGTATTCC +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTQSAGG*KCPQYS
Trigger: GGAATACTGAGGACATTTCCAGCCCCCAGCTGACTG...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTAGTTTCATGTCACAATaGGTAACAGATGTGTACACT +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPSFMSQ*VTDVYT
Trigger: AGTGTACACATCTGTTACTCATTGTGACATGAAACT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTTGTTGTATCGTTGCCTaGATTATATCAATCATGTCC +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPCCIVA*IISIMS
Trigger: GGACATGATTGATATAATTCAGGCAACGATACAACA...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACCATTTTCTAAAGCTGTaGGGACAGTGCTGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHHFLKL*GQCWGY
Trigger: GTAACCCCAGCACTGTCCTCACAGCTTTAGAAAATG...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACCATGCTTGGTCCCCTTaGTTTCTACTTCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNHAWSP*FLLQTG
Trigger: TCCTGTCTGAAGTAGAAATCAAGGGGACCAAGCATG...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACCTTCACTGTCTACCATaGCCATTTCCTGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHLHCLP*PFPELC
Trigger: ACACAGCTCAGGAAATGGTCATGGTAGACAGTGAAG...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATATGATCCCAGAGGCGTaGACCACCCGCAATTTACCA +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNMIPEA*TTRNLP
Trigger: TGGTAAATTGCGGGTGGTTCACGCCTCTGGGATCAT...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATCTTGGTCTCCAGCTTTaGCTCTATGGCGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNLGLQL*LYGGIQ
Trigger: TTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAG...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACGTACTCTCAGGGGATTaGTGGGTCTGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDVLSGD*WVWCFL
Trigger: AAGAAAACACCAGACCCAGCAATCCCCTGAGAGTAC...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACGATTTCCTGCAAGCTTaGCATACACTGTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNDFLQA*HTLSCV
Trigger: GACACAGGACAGTGTATGGCAAGCTTGCAGGAAATC...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAAGTTGTTTGGAAGTTaGACGCGCCGACAGATCACT +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHKLFGS*TRRQIT
Trigger: AGTGATCTGTCGGCGCGTGCAACTTCCAAACAACTT...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAACTCCTCCAGCAACTTaGTCTCCAGCTTTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTTPPAT*SPALPL
Trigger: TAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGT...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTCTTCTCTTGGGCTTCTaGGTCCCGAATAATCCTCGG +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFLLLGF*VPNNPR
Trigger: CCGAGGATTATTCGGGACCCAGAAGCCCAAGAGAAG...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATTCCAGGGGATTACACTaGAAAACCCAGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNSRGLH*KTQGWS
Trigger: AGACCAGCCCTGGGTTTTCCAGTGTAATCCCCTGGA...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAGCCATGCAAGGGCGTaGTTGGCGGACAGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFSHARA*LADSVN
Trigger: ATTTACACTGTCCGCCAACCACGCCCTTGCATGGCT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACTGTCACATCCATGGATaGATGCAGTGGTACAATGGA +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHCHIHG*MQWYNG
Trigger: TCCATTGTACCACTGCATTCATCCATGGATGTGACA...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACCTACATCCCAGGTGCTaGTGGAACCATTTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHLHPRC*WNHFLK
Trigger: CTTTAGAAAATGGTTCCATCAGCACCTGGGATGTAG...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACTGTGTAATCAGCAGCTaGGATATTCTCTGCCCGTTA +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHCVISS*DILCPL
Trigger: TAACGGGCAGAGAATATCTCAGCTGCTGATTACACA...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACTCTGCTAAGATGGTGTaGATTTCACGCAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNSAKMV*ISRRSL
Trigger: CAATGACCTGCGTGAAATGCACACCATCTTAGCAGA...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGCCAGACATACTGGCTaGTTTTGTCATCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICARHTG*FCHLMS
Trigger: TGACATCAGATGACAAAAGCAGCCAGTATGTCTGGC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTATTTGGTCATCTATCTaGATTTTACACAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPIWSSI*ILHRKE
Trigger: CTCTTTCCTGTGTAAAATGCAGATAGATGACCAAAT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACCCAGCTTTGCCTCTATaGCGGCATCCAAAATCATTT +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNPALPL*RHPKSF
Trigger: AAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGG...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACAGGTACCTCTTAGCCTaGCTGTGTTTCATTTTACCC +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNRYLLA*LCFILP
Trigger: GGGTAAAATGAAACACAGCCAGGCTAAGAGGTACCT...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAAGATCCCATGTTTGTTaGGCAGCGTGGAAAGGACTA +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTRSHVC*AAWKGL
Trigger: TAGTCCTTTCCACGCTGCCCAACAAACATGGGATCT...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACATGCAGATATAGCTTCTaGGCTATGAGCTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTCRYSF*AMSCRC
Trigger: ACACCTGCAGCTCATAGCCCAGAAGCTATATCTGCA...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACACAGGTGATCTGTATGTaGTTTGCCTTCTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTQVICM*FAFSGL
Trigger: TAGCCCAGAGAAGGCAAACCACATACAGATCACCTG...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAGTGCATCGAATATTATaGCTAGAGGTCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTVHRIL*LEVSAV
Trigger: CACTGCAGAGACCTCTAGTCATAATATTCGATGCAC...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATTGCTCTATACTTTCATaGACGGTGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNCSILS*TVTERE
Trigger: CTCCCTCTCTGTCACCGTTCATGAAAGTATAGAGCA...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATCTAGAGACCAGTTTCTaGCCACACTTCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNLETSF*PHFFSK
Trigger: CTTGGAGAAGAAGTGTGGTCAGAAACTGGTCTCTAG...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACATTCCTGTCCAAAGACTaGCTGCCAACACTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTFLSKD*LPTLCF
Trigger: AAAGCAAAGTGTTGGCAGTCAGTCTTTGGACAGGAA...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGAAAGAGAAGGAATGTaGGTAAGGCAAACGTCATCA +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICEREGM*VRQTSS
Trigger: TGATGACGTTTGCCTTACTCACATTCCTTCTCTTTC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAAGGTCATTGTCATCCTaGAGATATAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTRSLSS*RYSFWA
Trigger: AGCCCAGAAGCTATATCTGCAGGATGACAATGACCT...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACACATCCATGGATGAATaGAGTGGTACAATGGAGCAA +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHTSMDE*SGTMEQ
Trigger: TTGCTCCATTGTACCACTGCATTCATCCATGGATGT...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATTCTCACGATGACTACTaGGTCAGATTCTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNSHDDY*VRFWSC
Trigger: ACAGGACCAGAATCTGACCCAGTAGTCATCGTGAGA...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTGCCACCAAAGCTTCCTaGCATCATCATTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSATKAS*HHHSLR
Trigger: TCTCAGAGAATGATGATGCCAGGAAGCTTTGGTGGC...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACAATGCAGTGGTACAATaGAGCAATATTTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNNAVVQ*SNIWAH
Trigger: ATGGGCCCAAATATTGCTCCATTGTACCACTGCATT...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGTTGTGTTCAGGTATTaGCCACAGAAAGCATACAGA +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICVVFRY*PQKAYR
Trigger: TCTGTATGCTTTCTGTGGCCAATACCTGAACACAAC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATAGGCATTCTGCAAAGTaGTCAGAATGTTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNRHSAK*SECCRP
Trigger: GGGTCTGCAACATTCTGACCACTTTGCAGAATGCCT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAATAACTGTTACACTTTaGCCTGGAGGTGTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTITVTL*PGGVCC
Trigger: GCAACACACACCTCCAGGCCAAAGTGTAACAGTTAT...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATGCTTCTCAGCATTTCTaGCTTGGGTCTGAGGTAATA +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNASQHF*LGSEVI
Trigger: TATTACCTCAGACCCAAGTCAGAAATGCTGAGAAGC...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTCTAGAAATCTCACGATaGCTACTGGGTCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSLEISR*LLGQIL
Trigger: CAGAATCTGACCCAGTAGTCATCGTGAGATTTCTAG...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATTACTTTCATGAACGGTaGCAGAGAGGGAGGATTCAT +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNYFHER*QRGRIH
Trigger: ATGAATCCTCCCTCTCTGTCACCGTTCATGAAAGTA...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATACCATGACCATTTCCTaGGCTGTGTCCAAGATAAGA +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNTMTIS*AVSKIR
Trigger: TCTTATCTTGGACACAGCTCAGGAAATGGTCATGGT...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTCTAAGAGCTCAATGCTaGGGGCTTTACAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFLRAQC*GLYRSE
Trigger: TTCTGATCTGTAAAGCCCTCAGCATTGAGCTCTTAG...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATCTTAACAATGGAACCTaGGATTTCCTGCAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNLNNGT*DFLQAC
Trigger: GCAAGCTTGCAGGAAATCTCAGGTTCCATTGTTAAG...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTCTGAAGTTCCACTTATaGACACAATCGGATCCATCC +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSLKFHL*TQSDPS
Trigger: GGATGGATCCGATTGTGTTCATAAGTGGAACTTCAG...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAGGTAGAAGGCTGCATTaGATTTCTATTGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTGRRLH*ISIASQ
Trigger: CTGAGAAGCAATAGAAATGCAATGCAGCCTTCTACC...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGCATTGGTAGAAGGCTaGATTGCATTTCTATTGCTT +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICALVEG*IAFLLL
Trigger: AAGCAATAGAAATGCAATGCAGCCTTCTACCAATGC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACATGACTAGAGGTCTCTaGAGTGAAGACTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNMTRGL*SEDSFK
Trigger: TTTGAATGAGTCTTCACTGCAGAGACCTCTAGTCAT...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTACCCTCCTTGAGCCTTaGAATGTACAAGTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFTLLEP*NVQVRY
Trigger: GTACCTTACTTGTACATTGCAAGGCTCAAGGAGGGT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATAAGGGAGCCGGGAAATaGAGTGACCTTGTTTTTGAT +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNKGAGK*SDLVFD
Trigger: ATCAAAAACAAGGTCACTGCATTTCCCGGCTCCCTT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATAAAGGTTTTCACCACTaGTGGTGTGCCAGACATACT +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNKGFHH*WCARHT
Trigger: AGTATGTCTGGCACACCAGCAGTGGTGAAAACCTTT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACTGTCCAAAGACTGACTaGCAACACTTTGCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHCPKTD*QHFAFS
Trigger: ACTAAAAGCAAAGTGTTGGCAGTCAGTCTTTGGACA...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTCCTGGAGGTGTGTGTTaGATTGTTGAAAATTTGTCT +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICPGGVC*IVENLS
Trigger: AGACAAATTTTCAACAATGCAACACACACCTCCAGG...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATGGTCTTCCCAGTGCATaGCCCACCATATATAATAAG +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNGLPSA*PTIYNK
Trigger: CTTATTATATATGGTGGGCCATGCACTGGGAAGACC...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTAATAATCTGCTAAGATaGTGTGCATTTCACGCAGGT +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICNNLLR*CAFHAG
Trigger: ACCTGCGTGAAATGCACACCATCTTAGCAGATTATT...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACTGGAAAGAACACCACTaGTTGATAAAGACAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHWKEHH*LIKTVA
Trigger: TGCTACTGTCTTTATCAACCAGTGGTGTTCTTTCCA...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAGCGAGACCACAAACTaGTCATTGTGTGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFSETTN*SLCVIS
Trigger: GCTGATTACACACAATGACCAGTTTGTGGTCTCGCT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATTTTCAAGAAGTTGTTTaGAAGTTGCACGCGCCGACA +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNFQEVV*KLHAPT
Trigger: TGTCGGCGCGTGCAACTTCCAAACAACTTCTTGAAA...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGAGTGCAAGGAAAGTTaGTGTTTTGTAAAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICECKES*CFVKGT
Trigger: TGTTCCCTTTACAAAACACCAACTTTCCTTGCACTC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATCCCAGTACAGATCTATaGCCTGAAATTCCAATCCAT +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNPSTDL*PEIPIH
Trigger: ATGGATTGGAATTTCAGGTCATAGATCTGTACTGGG...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATGTCTGGTGTTTTCTTTaGGCTCACTCATTACACTGT +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNVWCFL*AHSLHC
Trigger: ACAGTGTAATGAGTGAGCTCAAAGAAAACACCAGAC...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTCAAACTGGCCAATTTTaGTCATGGTATAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFQTGQF*SWYKAS
Trigger: GCTGGCTTTATACCATGATCAAAATTGGCCAGTTTG...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTTCTCCACTCCCTAAATaGAATATGGTGGTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFSPLPK*NMVVVF
Trigger: GAACACAACCACCATATTTCATTTAGGGAGTGGAGA...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTGCTGCTTTTGTCATCTaGTGTCACCATTATATCTCC +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFAAFVI*CHHYIS
Trigger: GGAGATATAATGGTGACATCAGATGACAAAAGCAGC...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAGTGTGGATACCTTTTaGAAAGTTATCCAAGGACAT +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHSVDTF*KVIQGH
Trigger: ATGTCCTTGGATAACTTTTCAAAAGGTATCCACACT...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTATAATCAACTCCAGGTaGTCTGTATGTGGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFIINSR*SVCGLP
Trigger: AGGCAAACCACATACAGATCACCTGGAGTTGATTAT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATCACCACGAAGGTATTTaGGGAGGTAATAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNHHEGI*GGNKGI
Trigger: AATGCCTTTATTACCTCCGCAAATACCTTCGTGGTG...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACAGCACTTTGTCAAACTaGCCAATTTTGATCATGGTA +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDSTLSN*PILIMV
Trigger: TACCATGATCAAAATTGGCCAGTTTGACAAAGTGCT...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACATATCTATGTCCCAAATaGAAAGAACACCACTGGTTG +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTYLCPK*KEHHWL
Trigger: CAACCAGTGGTGTTCTTTCCATTTGGGACATAGATA...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATGGCAACAACAGACTTTaGATGGGTTTTCCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNGNNRL*MGFPVL
Trigger: TAAGACTGGAAAACCCATCCAAAGTCTGTTGTTGCC...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATTCTCATCTTAACCAGTaGGATGTATTATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNSHLNQ*DVLCCL
Trigger: GAGGCAGCATAATACATCCCACTGGTTAAGATGAGA...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTTCAGTATCTCAGAGATaGCATGTTGAGAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFSVSQR*HVEKAC
Trigger: GCAAGCTTTCTCAACATGCCATCTCTGAGATACTGA...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309447.6
3UTR CAA 72 bp TTTATGGCAGAGCTGGGCCTAGAGCAAATCAATTCCTaGTTCATTATTCTAGTAAAGTGTTACTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: FMAELGLEQINS*FIILVKCYFST
Trigger: AGTAGAGAAGTAACACTTTACTAGAATAATGAACAAGGAATTGATTTGCTCTAGGCCCAGCTCTGCCATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAGCAAAATTTCTTGGTaGTACTTCCTGTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFSKISW*YFLSKD
Trigger: GTCTTTGGACAGGAAGTATCACCAAGAAATTTTGCT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTATTCTGGATACACTTTaGCAAAAAGACCACACCCAA +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSILDTL*QKDHTQ
Trigger: TTGGGTGTGGTCTTTTTGTCAAAGTGTATCCAGAAT...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTAAGAGGAAATACAATTaGCCTGGATTCTCTATGGGT +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSKRKYN*PGFSMG
Trigger: ACCCATAGAGAATCCAGGTCAATTGTATTTCCTCTT...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTACACCGGTAGTTAACTaGCAATTGTTCACAAACACT +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSTPVVN*QLFTNT
Trigger: AGTGTTTGTGAACAATTGGCAGTTAACTACCGGTGT...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTTCATTCTCTGAGAGCTaGTCTAGTGCATCGAATATT +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSSFSES*SSASNI
Trigger: AATATTCGATGCACTAGAGCAGCTCTCAGAGAATGA...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTCAAACATTGGCAGTGTaGACTTGGATAATGCATTGT +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSQTLAV*TWIMHC
Trigger: ACAATGCATTATCCAAGTGCACACTGCCAATGTTTG...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATATAAAGCGTTCGTTGTaGTTGGCTCTGAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNIKRSL*LALNFS
Trigger: TGAAAAGTTCAGAGCCAAGCACAACGAACGCTTTAT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACCTCGCATGCAATTGTTaGAACTGTCTTTTAATAAAG +
Preference number: 4 (lower is better)
Translates to: TDNDRNENVLPKELKSIDLACNC*NCLLIK
Trigger: CTTTATTAAAAGACAGTTGCAACAATTGCATGCGAG...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTTTGGCAGTGTGCACTTaGATAATGCATTGTTCACAT +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFLAVCT*IMHCSH
Trigger: ATGTGAACAATGCATTATCCAAGTGCACACTGCCAA...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTCAATGGAGCAATATTTaGGCCCATCTTTATCACACT +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFQWSNI*AHLYHT
Trigger: AGTGTGATAAAGATGGGCCCAAATATTGCTCCATTG...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACACTAAATGAAATATGGTaGTTGTGTTCAGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTLNEIW*LCSGIG
Trigger: GCCAATACCTGAACACAACCACCATATTTCATTTAG...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACTCCCTAAATGAAATATaGTGGTTGTGTTCAGGTATT +
Preference number: 4 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHSLNEI*WLCSGI
Trigger: AATACCTGAACACAACCACCATATTTCATTTAGGGA...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATTATCTCTCGGGAAACTaGGAATACACTTGGGTATTT +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNYLSGN*EYTWVF
Trigger: AAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATA...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTAAAGAAGCATACAGATaGTGTGTAGAAGTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICKEAYR*CVEVRK
Trigger: CTTTCTTACTTCTACACACCATCTGTATGCTTCTTT...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTGCCGTAAGGAGGATATaGAAGAAAGAACAATCATCT +
Preference number: 4 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSAVRRI*KKEQSS
Trigger: AGATGATTGTTCTTTCTTCCATATCCTCCTTACGGC...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTACAGGAGGCAAGAATTaGCATTGTCATAAATCAACA +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFTGGKN*HCHKST
Trigger: TGTTGATTTATGACAATGTCAATTCTTGCCTCCTGT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAGTAGCATATTGTGGTaGCTGGATTTCACTAACTTA +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFSSILW*LDFTNL
Trigger: TAAGTTAGTGAAATCCAGTCACCACAATATGCTACT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATAAAGCTTGCTTTCTATaGAGACTAACTGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNKACFL*RLTAGI
Trigger: AATTCCTGCAGTTAGTCTTCATAGAAAGCAAGCTTT...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR TCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATCTGGGTATTTTTATCTaGATCACATCTTTGAACGCT +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNLGIFI*ITSLNA
Trigger: AGCGTTCAAAGATGTGATTCAGATAAAAATACCCAG...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATTCATCTGATATCTCTTaGCATGTCTTCTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNSSDIS*HVFSFS
Trigger: TGAAAACGAGAAGACATGGCAAGAGATATCAGATGA...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAATTTTGATTTTCAGTaGAGCATCTACACGGTCTAC +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFNFDFQ*SIYTVY
Trigger: GTAGACCGTGTAGATGCTGCACTGAAAATCAAAATT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTACAACAGACTTTGGATaGGTTTTCCAGTCTTATCTA +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFTTDFG*VFQSYL
Trigger: TAGATAAGACTGGAAAACCCATCCAAAGTCTGTTGT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTTTTCCCTTCTGTACGTaGATCACATATTTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFFPFCT*ITYFCL
Trigger: TAAGCAGAAATATGTGATCCACGTACAGAAGGGAAA...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
36% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR GCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAACAAAACATGGACCTaGAGAAGTTTTCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFNKTWT*RSFQAI
Trigger: AATTGCTTGAAAACTTCTGCAGGTCCATGTTTTGTT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CCA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTGAAATACAATTGACCTaGATTCTCTATGGGTTACAT +
Preference number: 4 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFEIQLT*ILYGLH
Trigger: ATGTAACCCATAGAGAATCCAGGTCAATTGTATTTC...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp GGCCTCCGCCTTCGCCCGCTGCTAGGGCTCCGAGCAGCAGCCAGCTaGAGCGGGAGGTCAGCGTGGCGGCGGCTACGCGCGCAGCGCCCG +
Preference number: 5 (lower is better)
Translates to: GLRLRPLLGLRAAAS*SGRSAWRRLRAQRP
Trigger: CGGGCGCTGCGCGCGTAGCCGCCGCCACGCTGACCTCCCGCTCCAGCTGGCTGCTGCTCGGAGCCCTAGCAGCGGGCGAAGGCGGAGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp AAGCCGCCCGCCGGAGCGCAGAGTCTCGGGGACAGGGCAGCTTGGTaGCCGCGCCGGCCGGCCACATCGCCCTCTGGGAGGAACAGCCAC +
Preference number: 5 (lower is better)
Translates to: KPPAGAQSLGDRAAW*PRRPATSPSGRNSH
Trigger: GTGGCTGTTCCTCCCAGAGGGCGATGTGGCCGGCCGGCGCGGGCACCAAGCTGCCCTGTCCCCGAGACTCTGCGCTCCGGCGGGCGGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp CGGCTCAGAGCCGCTCCGAGCCCGAAGCGCCTTTGGCGAGCTCCGTaGCGCACAGCACCCGCCGGCGAGGAGAAGCCATACGGACCCTCG +
Preference number: 5 (lower is better)
Translates to: RLRAAPSPKRLWRAP*RTAPAGEEKPYGPS
Trigger: CGAGGGTCCGTATGGCTTCTCCTCGCCGGCGGGTGCTGTGCGCCACGGAGCTCGCCAAAGGCGCTTCGGGCTCGGAGCGGCTCTGAGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp AGGAGAAGCCATACGGACCCTCGGGCTCCTGTCGCGGCGGTCTCCTaGCCTTCTGGGCCTCCGCCTTCGCCCGCTGCTAGGGCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: RRSHTDPRAPVAAVS*PSGPPPSPAARAPS
Trigger: GCTCGGAGCCCTAGCAGCGGGCGAAGGCGGAGGCCCAGAAGGGCAGGAGACCGCCGCGACAGGAGCCCGAGGGTCCGTATGGCTTCTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp TTGTTGGGCAGCGTGGAAAGGACTATCCGGACAAAGCGGGGCAGGTaGGCTGGGAGCCACCAAAGCTTCCTGGCATCATCATTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LLGSVERTIRTKRGR*AGSHQSFLASSFSE
Trigger: CTCAGAGAATGATGATGCCAGGAAGCTTTGGTGGCTCCCAGCTCACCTGCCCCGCTTTGTCCGGATAGTCCTTTCCACGCTGCCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp AGGCATTCTGCAAAGTGGTCAGAATGTTGCAGACCCTGTGGCCTGTaGCGAGCCTCCAAACCCTGGAGGCATTTTCCTCACAGAGCGAGA +
Preference number: 5 (lower is better)
Translates to: RHSAKWSECCRPCGL*RASKPWRHFPHRAR
Trigger: TCTCGCTCTGTGAGGAAAATGCCTCCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCTGCAACATTCTGACCACTTTGCAGAATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp GGGCAGGGAGCTTACAACAGGCAGCAGTCTTTGCTGAAGCTCTGCTaGAAGGGAGCCGGGAAATGCAGTGACCTTGTTTTTGATGCTGCG +
Preference number: 5 (lower is better)
Translates to: GQGAYNRQQSLLKLC*KGAGKCSDLVFDAA
Trigger: CGCAGCATCAAAAACAAGGTCACTGCATTTCCCGGCTCCCTTTCAGCAGAGCTTCAGCAAAGACTGCTGCCTGTTGTAAGCTCCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp TCAGAATGTTGCAGACCCTGTGGCCTGTGGCGAGCCTCCAAACCCTaGAGGCATTTTCCTCACAGAGCGAGACCACAAACTGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: SECCRPCGLWRASKP*RHFPHRARPQTGHC
Trigger: ACAATGACCAGTTTGTGGTCTCGCTCTGTGAGGAAAATGCCTCCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCTGCAACATTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp CTGGTGAGTTTCATGCCCAGGATGACAGACTGGGCTGTGGTGATTTaGCTGAGTAGCTGTCGAGTCTCTACATCCCAGGTGCTGATGGAA +
Preference number: 5 (lower is better)
Translates to: LVSFMPRMTDWAVVI*LSSCRVSTSQVLME
Trigger: TTCCATCAGCACCTGGGATGTAGAGACTCGACAGCTACTCAGGCAAATCACCACAGCCCAGTCTGTCATCCTGGGCATGAAACTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp TCCGGACAAAGCGGGGCAGGTGAGCTGGGAGCCACCAAAGCTTCCTaGCATCATCATTCTCTGAGAGCTGCTCTAGTGCATCGAATATTA +
Preference number: 5 (lower is better)
Translates to: SGQSGAGELGATKAS*HHHSLRAALVHRIL
Trigger: TAATATTCGATGCACTAGAGCAGCTCTCAGAGAATGATGATGCCAGGAAGCTTTGGTGGCTCCCAGCTCACCTGCCCCGCTTTGTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCCCGTATCTTCAGGGTaGGCGCTGATGAAGACCCGG +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMPVSSG*ALMKTR
Trigger: CCGGGTCTTCATCAGCGCCAACCCTGAAGATACGGG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp CCCAGGGCTGGTCTGGAGCCTGCCTGTCAAAGGAAGCCTGTTCCATaGAGTGCTTTTCTTCCTCCAGCAAACTTCTGTTCTCCAAGTCAA +
Preference number: 5 (lower is better)
Translates to: PRAGLEPACQRKPVP*SAFLPPANFCSPSQ
Trigger: TTGACTTGGAGAACAGAAGTTTGCTGGAGGAAGAAAAGCACTTCATGGAACAGGCTTCCTTTGACAGGCAGGCTCCAGACCAGCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp CGACCATCCCGAGACAACCTCTGCCGCCAGATGATCCCAGAGGCGTaGACCACCCGCAATTTACCACTGTATAAATCTAGCACATTGATG +
Preference number: 5 (lower is better)
Translates to: RPSRDNLCRQMIPEA*TTRNLPLYKSSTLM
Trigger: CATCAATGTGCTAGATTTATACAGTGGTAAATTGCGGGTGGTTCACGCCTCTGGGATCATCTGGCGGCAGAGGTTGTCTCGGGATGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp TGTATACCAGGTAGCGACCATCCCGAGACAACCTCTGCCGCCAGATaGTCCCAGAGGCGTGAACCACCCGCAATTTACCACTGTATAAAT +
Preference number: 5 (lower is better)
Translates to: CIPGSDHPETTSAAR*SQRREPPAIYHCIN
Trigger: ATTTATACAGTGGTAAATTGCGGGTGGTTCACGCCTCTGGGATCATCTGGCGGCAGAGGTTGTCTCGGGATGGTCGCTACCTGGTATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp GTGTGCATTTCACGCAGGTCATTGTCATCCTGCAGATATAGCTTCTaGGCTATGAGCTGCAGGTGTCTGTTGGCCCAGACTAGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: VCISRRSLSSCRYSF*AMSCRCLLAQTRSV
Trigger: CACACTCCTAGTCTGGGCCAACAGACACCTGCAGCTCATAGCCCAGAAGCTATATCTGCAGGATGACAATGACCTGCGTGAAATGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp GTAATAAAGGCATTCTGCAAAGTGGTCAGAATGTTGCAGACCCTGTaGCCTGTGGCGAGCCTCCAAACCCTGGAGGCATTTTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: VIKAFCKVVRMLQTL*PVASLQTLEAFSSQ
Trigger: CTGTGAGGAAAATGCCTCCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCTGCAACATTCTGACCACTTTGCAGAATGCCTTTATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTCGCAGCAGCTGGTGTTaGAGGACCTGGCTGCACATC +
Preference number: 5 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPRSSWC*RTWLHI
Trigger: GATGTGCAGCCAGGTCCTCAAACACCAGCTGCTGCG...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp TGTCTAAGTTTGGGCAGGGAGCTTACAACAGGCAGCAGTCTTTGCTaGAGCTCTGCTGAAAGGGAGCCGGGAAATGCAGTGACCTTGTTT +
Preference number: 5 (lower is better)
Translates to: CLSLGRELTTGSSLC*SSAEREPGNAVTLF
Trigger: AAACAAGGTCACTGCATTTCCCGGCTCCCTTTCAGCAGAGCTTCAGCAAAGACTGCTGCCTGTTGTAAGCTCCCTGCCCAAACTTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp GTACAGCAGATCGATGACAGTGACATCTTTGCTGGCTTCGAGCCATaGAAGGGCGTGGTTGGCGGACAGTGTAAATCCATTGATGTAGGT +
Preference number: 5 (lower is better)
Translates to: VQQIDDSDIFAGFEP*KGVVGGQCKSIDVG
Trigger: ACCTACATCAATGGATTTACACTGTCCGCCAACCACGCCCTTGCATGGCTCGAAGCCAGCAAAGATGTCACTGTCATCGATCTGCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp TTTCAAGCAATTCTCCAGCAGCTTCATGCGGGTCTTCTGGAGCTCTaGGCTGTCCCACTCATCTTCTTCCACTCCCCAGTACAGATCTAT +
Preference number: 5 (lower is better)
Translates to: FQAILQQLHAGLLEL*AVPLIFFHSPVQIY
Trigger: ATAGATCTGTACTGGGGAGTGGAAGAAGATGAGTGGGACAGCCCAGAGCTCCAGAAGACCCGCATGAAGCTGCTGGAGAATTGCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp CTGGCACCGAGTTCTCATCTCGACAGTACCACTCCTCCAGCAACTTaGTCTCCAGCTTTGCCTCTATGGCGGCATCCAAAATCATTTCAA +
Preference number: 5 (lower is better)
Translates to: LAPSSHLDSTTPPAT*SPALPLWRHPKSFQ
Trigger: TTGAAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTGGTACTGTCGAGATGAGAACTCGGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCACTCCTCCAGCAACTaGGTCTCCAGCTTTGCCTCT +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMHSSSN*VSSFAS
Trigger: AGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp CGCAGGTCATTGTCATCCTGCAGATATAGCTTCTGGGCTATGAGCTaGAGGTGTCTGTTGGCCCAGACTAGGAGTGTGACATTTTTCACA +
Preference number: 5 (lower is better)
Translates to: RRSLSSCRYSFWAMS*RCLLAQTRSVTFFT
Trigger: TGTGAAAAATGTCACACTCCTAGTCTGGGCCAACAGACACCTGCAGCTCATAGCCCAGAAGCTATATCTGCAGGATGACAATGACCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp AGGTACTTTTCATCACTGGTGAGTTTCATGCCCAGGATGACAGACTaGGCTGTGGTGATTTGCCTGAGTAGCTGTCGAGTCTCTACATCC +
Preference number: 5 (lower is better)
Translates to: RYFSSLVSFMPRMTD*AVVICLSSCRVSTS
Trigger: GGATGTAGAGACTCGACAGCTACTCAGGCAAATCACCACAGCCCAGTCTGTCATCCTGGGCATGAAACTCACCAGTGATGAAAAGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTGAGCCCGAAGCGCCTTaGGCGAGCTCCGTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSEPEAP*ASSVAH
Trigger: GTGCGCCACGGAGCTCGCCAAAGGCGCTTCGGGCTC...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGTGCAAGATCCCATGTTaGTTGGGCAGCGTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMCKIPC*LGSVER
Trigger: CCTTTCCACGCTGCCCAACAAACATGGGATCTTGCA...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGGCGCTGCTTCCATGCTaGGTCCCCTTGATTTCTACT +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMALLPC*VPLIST
Trigger: AGTAGAAATCAAGGGGACCAAGCATGGAAGCAGCGC...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTCATGCAAGGGCGTGGTaGGCGGACAGTGTAAATCCA +
Preference number: 5 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPHARAW*ADSVNP
Trigger: TGGATTTACACTGTCCGCCAACCACGCCCTTGCATG...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp AGGATTCATCGACGTCTTTGTGAGATCTCCAGTGCCTCACCTCCCTaGAGGTCAGGTTCACAAACATTGGCAGTGTGCACTTGGATAATG +
Preference number: 5 (lower is better)
Translates to: RIHRRLCEISSASPP*RSGSQTLAVCTWIM
Trigger: CATTATCCAAGTGCACACTGCCAATGTTTGTGAACCTGACCTTCAGGGAGGTGAGGCACTGGAGATCTCACAAAGACGTCGATGAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp GCTGGGAGCCACCAAAGCTTCCTGGCATCATCATTCTCTGAGAGCTaGTCTAGTGCATCGAATATTATGACTAGAGGTCTCTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: AGSHQSFLASSFSES*SSASNIMTRGLCSE
Trigger: TTCACTGCAGAGACCTCTAGTCATAATATTCGATGCACTAGAGCAGCTCTCAGAGAATGATGATGCCAGGAAGCTTTGGTGGCTCCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp CGAGCATACCCGCTCATAACAAGAGTTGTGTTTCTTGGAGGGTGTTaGTTCATTGGACTCAGTAGAGTCACTAACTGTGATGGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: RAYPLITRVVFLGGC*FIGLSRVTNCDGAV
Trigger: GACAGCCCCATCACAGTTAGTGACTCTACTGAGTCCAATGAAGCAACACCCTCCAAGAAACACAACTCTTGTTATGAGCGGGTATGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCTTCAGCTCCTTCTCTaGCGAGTAGTTGTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMLQLLL*RVVVSQ
Trigger: CTGGCTTACAACTACTCGCAAGAGAAGGAGCTGAAG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp GACTGGATGATAAGGGAAGACGCTCTGGGCTGTATGTCACATCCATaGATGAATGCAGTGGTACAATGGAGCAATATTTGGGCCCATCTT +
Preference number: 5 (lower is better)
Translates to: DWMIREDALGCMSHP*MNAVVQWSNIWAHL
Trigger: AAGATGGGCCCAAATATTGCTCCATTGTACCACTGCATTCATCCATGGATGTGACATACAGCCCAGAGCGTCTTCCCTTATCATCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp ACCACCTCACTGTCTTCTCTTCGGCAATCAAAGTCATCAGTCAGCTaGGGGCTGGAAATGTCCTCAGTATTCCAAACAGAAAGACTTCCT +
Preference number: 5 (lower is better)
Translates to: TTSLSSLRQSKSSVS*GLEMSSVFQTERLP
Trigger: AGGAAGTCTTTCTGTTTGGAATACTGAGGACATTTCCAGCCCCCAGCTGACTGATGACTTTGATTGCCGAAGAGAAGACAGTGAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp GCCCACAATGATGTTCAGGTGCCTCTGGGAGAGTGCAAGGAAAGTTaGTGTTTTGTAAAGGGAACAAGCACCGATATTTTTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: AHNDVQVPLGECKES*CFVKGTSTDIFAIC
Trigger: GCAGATGGCAAAAATATCGGTGCTTGTTCCCTTTACAAAACACCAACTTTCCTTGCACTCTCCCAGAGGCACCTGAACATCATTGTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACATGCTGCGGAGGGTGTaGGCCAGGAACTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TDNDRNENVLPKELKSIDMLRRV*ARNFSS
Trigger: GGAGCTGAAGTTCCTGGCCAACACCCTCCGCAGCAT...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp ACAAGTAAGGTACTCTCAGGGGATTGCTGGGTCTGGTGTTTTCTTTaGGCTCACTCATTACACTGTTGTCTAGGGCTAACACATCCTCCA +
Preference number: 5 (lower is better)
Translates to: TSKVLSGDCWVWCFL*AHSLHCCLGLTHPP
Trigger: TGGAGGATGTGTTAGCCCTAGACAACAGTGTAATGAGTGAGCTCAAAGAAAACACCAGACCCAGCAATCCCCTGAGAGTACCTTACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp GATAAGGGAAGACGCTCTGGGCTGTATGTCACATCCATGGATGAATaGAGTGGTACAATGGAGCAATATTTGGGCCCATCTTTATCACAC +
Preference number: 5 (lower is better)
Translates to: DKGRRSGLYVTSMDE*SGTMEQYLGPSLSH
Trigger: GTGTGATAAAGATGGGCCCAAATATTGCTCCATTGTACCACTGCATTCATCCATGGATGTGACATACAGCCCAGAGCGTCTTCCCTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp CACTGTCTTCTCTTCGGCAATCAAAGTCATCAGTCAGCTGGGGGCTaGAAATGTCCTCAGTATTCCAAACAGAAAGACTTCCTTCACTGT +
Preference number: 5 (lower is better)
Translates to: HCLLFGNQSHQSAGG*KCPQYSKQKDFLHC
Trigger: ACAGTGAAGGAAGTCTTTCTGTTTGGAATACTGAGGACATTTCCAGCCCCCAGCTGACTGATGACTTTGATTGCCGAAGAGAAGACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGAGAAGATGTCTAAGTTaGGGCAGGGAGCTTACAACA +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMRRCLS*GRELTT
Trigger: TGTTGTAAGCTCCCTGCCCAAACTTAGACATCTTCT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGAGGCAACAACAGACTTaGGATGGGTTTTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMRQQQT*DGFSSL
Trigger: AAGACTGGAAAACCCATCCAAAGTCTGTTGTTGCCT...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp TCTTCTCCAAGGACCAGAATAACTGCTCTATACTTTCATGAACGGTaGCAGAGAGGGAGGATTCATCGACGTCTTTGTGAGATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SSPRTRITALYFHER*QRGRIHRRLCEISS
Trigger: ACTGGAGATCTCACAAAGACGTCGATGAATCCTCCCTCTCTGTCACCGTTCATGAAAGTATAGAGCAGTTATTCTGGTCCTTGGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGATGTGACCTTCCTTTaGACGCGCAGCAGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICDVTFL*TRSSWC
Trigger: ACACCAGCTGCTGCGCGTCAAAAGGAAGGTCACATC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp CTCCAGCTTTGCCTCTATGGCGGCATCCAAAATCATTTCAAACTCTaGGGCTTCAACTTCTCCAGGGATTCGGATATTCCCATATTTTTC +
Preference number: 5 (lower is better)
Translates to: LQLCLYGGIQNHFKL*GFNFSRDSDIPIFF
Trigger: GAAAAATATGGGAATATCCGAATCCCTGGAGAAGTTGAAGCCTCAGAGTTTGAAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp TCACAGAGCGAGACCACAAACTGGTCATTGTGTGTAATCAGCAGCTaGGATATTCTCTGCCCGTTAATTCGAAAAAGGTTTTCACCACTG +
Preference number: 5 (lower is better)
Translates to: SQSETTNWSLCVISS*DILCPLIRKRFSPL
Trigger: CAGTGGTGAAAACCTTTTTCGAATTAACGGGCAGAGAATATCTCAGCTGCTGATTACACACAATGACCAGTTTGTGGTCTCGCTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp GACTGCCAACACTTTGCTTTTAGTCATTCCCACCACGAAGGTATTTaGGGAGGTAATAAAGGCATTCTGCAAAGTGGTCAGAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: DCQHFAFSHSHHEGI*GGNKGILQSGQNVA
Trigger: TGCAACATTCTGACCACTTTGCAGAATGCCTTTATTACCTCCGCAAATACCTTCGTGGTGGGAATGACTAAAAGCAAAGTGTTGGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACGGTACTCTCAGGGGATaGCTGGGTCTGGTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: TDNDRNENVLPKELKSIDGTLRG*LGLVFS
Trigger: AGAAAACACCAGACCCAGCAATCCCCTGAGAGTACC...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTCCACTGAGACCCTCCTaGAGCCTTGCAATGTACAAG +
Preference number: 5 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICPLRPS*SLAMYK
Trigger: CTTGTACATTGCAAGGCTCAAGGAGGGTCTCAGTGG...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAGCTGCAGGTGTCTGTaGGCCCAGACTAGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFSCRCL*AQTRSV
Trigger: CACACTCCTAGTCTGGGCCAACAGACACCTGCAGCT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GCACTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAAAGTGGTCAGAATGTaGCAGACCCTGTGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ALHKNNTLMKLKTCLGIHKVVRM*QTLWPV
Trigger: CACAGGCCACAGGGTCTGCAACATTCTGACCACTTT...GTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGTCACAGCAAAATTTCTaGGTGATACTTCCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMSQQNF*VILPVQ
Trigger: TTGGACAGGAAGTATCACCAAGAAATTTTGCTGTGA...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGCATGTCCTCATAAAATaGTTTACCAAGTCCTTCGAT +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMHVLIK*FTKSFD
Trigger: ATCGAAGGACTTGGTAAACAATTTTATGAGGACATG...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AGCCCTATGATAGTGGTAGTTAGTTCTTGTCCCAGTCCAGTCCACAGTCTCATGTATATAATAAGAGGGTaGATGTGTCCAGCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: SPMIVVVSSCPSPVHSLMYIIRG*MCPALL
Trigger: AAGCAAAGCTGGACACATCAACCCTCTTATTATATA...CATGAGACTGTGGACTGGACTGGGACAAGAACTAACTACCACTATCATAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACGGAAATGCAGTGACCTaGTTTTTGATGCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNGNAVT*FLMLRR
Trigger: CCTCCGCAGCATCAAAAACAAGGTCACTGCATTTCC...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACCCATGCTTGGTCCCCTaGATTTCTACTTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: TDNDRNENVLPKELKSIDPCLVP*ISTSDR
Trigger: CCTGTCTGAAGTAGAAATCAAGGGGACCAAGCATGG...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp CTTCAGCTCCTTCTCTTGCGAGTAGTTGTAAGCCAGCTCAATGTCTaGAAGCACTTTGTCAAACTGGCCAATTTTGATCATGGTATAAAG +
Preference number: 5 (lower is better)
Translates to: LQLLLLRVVVSQLNV*KHFVKLANFDHGIK
Trigger: CTTTATACCATGATCAAAATTGGCCAGTTTGACAAAGTGCTTTCAGACATTGAGCTGGCTTACAACTACTCGCAAGAGAAGGAGCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp ATATCTCCGGTGGATGTTAACACACAGTGTTCAACTATTCCTTCATaGTTGAATACTGCTTCGATGAAGCCACTGCTGAAGTTCCACTTA +
Preference number: 5 (lower is better)
Translates to: ISPVDVNTQCSTIPS*LNTASMKPLLKFHL
Trigger: TAAGTGGAACTTCAGCAGTGGCTTCATCGAAGCAGTATTCAAGCATGAAGGAATAGTTGAACACTGTGTGTTAACATCCACCGGAGATAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp TTCACAGCAAAATTTCTTGGTGATACTTCCTGTCCAAAGACTGACTaGCAACACTTTGCTTTTAGTCATTCCCACCACGAAGGTATTTGC +
Preference number: 5 (lower is better)
Translates to: FTAKFLGDTSCPKTD*QHFAFSHSHHEGIC
Trigger: GCAAATACCTTCGTGGTGGGAATGACTAAAAGCAAAGTGTTGGCAGTCAGTCTTTGGACAGGAAGTATCACCAAGAAATTTTGCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp AGGAATAAATTCATCCCTGAGTTTTATCAGCTTCTCTTGGGCTTCTaGGTCCCGAATAATCCTCGGTTCTGTTCCAGTTATATCCATGTA +
Preference number: 5 (lower is better)
Translates to: RNKFIPEFYQLLLGF*VPNNPRFCSSYIHV
Trigger: TACATGGATATAACTGGAACAGAACCGAGGATTATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAAACTCAGGGATGAATTTATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTTTTTATCAGCTTCTCTaGGGCTTCTGGGTCCCGAAT +
Preference number: 5 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICFYQLL*GFWVPN
Trigger: ATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAAA...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTCTTCTTAGGGTAGCTTaGAACCAGACACCGGTAGTT +
Preference number: 5 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICLLRVA*NQTPVV
Trigger: AACTACCGGTGTCTGGTTCAAAGCTACCCTAAGAAG...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTGCAGTGACCTTGTTTTaGATGCTGCGGAGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFAVTLF*MLRRVL
Trigger: CAACACCCTCCGCAGCATCAAAAACAAGGTCACTGC...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACAGATTTCCTGCAAGCTaGCCATACACTGTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNRFPAS*PYTVLC
Trigger: ACACAGGACAGTGTATGGCAAGCTTGCAGGAAATCT...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTAAAGAACACCACTGGTaGATAAAGACAGTAGCATAT +
Preference number: 5 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPKEHHW*IKTVAY
Trigger: ATATGCTACTGTCTTTATCAACCAGTGGTGTTCTTT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATGAAGTTGTTTGGAAGTaGCACGCGCCGACAGATCAC +
Preference number: 5 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNEVVWK*HAPTDH
Trigger: GTGATCTGTCGGCGCGTGCAACTTCCAAACAACTTC...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTTTTTCAAGAAGTTGTTaGGAAGTTGCACGCGCCGAC +
Preference number: 5 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICFSRSC*EVARAD
Trigger: GTCGGCGCGTGCAACTTCCAAACAACTTCTTGAAAA...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ACTGATAATGACAGGAATGAGAATGTGTTGCCTAAAGAGCTCAAAAGCATAGACGAGGGTGTTGCTTCATaGGACTCAGTAGAGTCACTA +
Preference number: 5 (lower is better)
Translates to: TDNDRNENVLPKELKSIDEGVAS*DSVESL
Trigger: TAGTGACTCTACTGAGTCCAATGAAGCAACACCCTC...GTCTATGCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCTGTCATTATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp TATAATCAACTCCAGGTGATCTGTATGTGGTTTGCCTTCTCTGGGCTACCACCTAAGTGTGGATACCTTTaGAAAAGTTATCCAAGGACA +
Preference number: 5 (lower is better)
Translates to: YNQLQVICMWFAFSGLPPKCGYL*KSYPRT
Trigger: TGTCCTTGGATAACTTTTCAAAAGGTATCCACACTT...AGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAGTTGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp TTCCAAACAGAAAGACTTCCTTCACTGTCTACCATGACCATTTCCTaGGCTGTGTCCAAGATAAGAAGAAACTTCACAAATCCACCTGAA +
Preference number: 5 (lower is better)
Translates to: FQTERLPSLSTMTIS*AVSKIRRNFTNPPE
Trigger: TTCAGGTGGATTTGTGAAGTTTCTTCTTATCTTGGACACAGCTCAGGAAATGGTCATGGTAGACAGTGAAGGAAGTCTTTCTGTTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 90 bp ACAATAGTAGGAATAAATTCATCCCTGAGTTTTATCAGCTTCTCTTaGGCTTCTGGGTCCCGAATAATCCTCGGTTCTGTTCCAGTTATA +
Preference number: 5 (lower is better)
Translates to: TIVGINSSLSFISFS*ASGSRIILGSVPVI
Trigger: TATAACTGGAACAGAACCGAGGATTATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAAACTCAGGGATGAATTTATTCCTACTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACTTCTCGTTTTCAGCATaGGTAGAAGGCTGCATTGCA +
Preference number: 5 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNFSFSA*VEGCIA
Trigger: TGCAATGCAGCCTTCTACCAATGCTGAAAACGAGAA...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATAAGATCCCATGTTTGTaGGGCAGCGTGGAAAGGACT +
Preference number: 5 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNKIPCL*GSVERT
Trigger: AGTCCTTTCCACGCTGCCCAACAAACATGGGATCTT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACTCAGGTTCACAAACATaGGCAGTGTGCACTTGGATA +
Preference number: 5 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNSGSQT*AVCTWI
Trigger: TATCCAAGTGCACACTGCCAATGTTTGTGAACCTGA...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATATGACAGTGACATCTTaGCTGGCTTCGAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNMTVTS*LASSHA
Trigger: TGCATGGCTCGAAGCCAGCAAAGATGTCACTGTCAT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAAGCGTTCGTTGTGCTaGGCTCTGAACTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFKRSLC*ALNFSA
Trigger: GGCTGAAAAGTTCAGAGCCAAGCACAACGAACGCTT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACACTGACTGCCAACACTTaGCTTTTAGTCATTCCCACC +
Preference number: 5 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTLTANT*LLVIPT
Trigger: GGTGGGAATGACTAAAAGCAAAGTGTTGGCAGTCAG...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACTGTGTCCAGCTTTGCTaGGAAGAATGTAGTTATGCA +
Preference number: 5 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNCVQLC*EECSYA
Trigger: TGCATAACTACATTCTTCCAAGCAAAGCTGGACACA...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAAGCCATAAGCCTTCTTaGCTACTTCAGCTAGCAGAA +
Preference number: 5 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTSHKPS*LLQLAE
Trigger: TTCTGCTAGCTGAAGTAGCAAAGAAGGCTTATGGCT...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAATTTCACGCAGGTCATaGTCATCCTGCAGATATAGC +
Preference number: 5 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTISRRS*SSCRYS
Trigger: GCTATATCTGCAGGATGACAATGACCTGCGTGAAAT...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTGGTTGTGTTCAGGTATaGGCCACAGAAAGCATACAG +
Preference number: 5 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFGCVQV*ATESIQ
Trigger: CTGTATGCTTTCTGTGGCCAATACCTGAACACAACC...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTGATATAAAGCGTTCGTaGTGCTTGGCTCTGAACTTT +
Preference number: 5 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICDIKRS*CLALNF
Trigger: AAAGTTCAGAGCCAAGCACAACGAACGCTTTATATC...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CACTTTGACAAAAAGACCACACCCAAGACTAACCTATTTGTCCATTTCATGAACAGAGTGCAAGGAAAGTaGGTGTTTTGTAAAGGGAAC +
Preference number: 5 (lower is better)
Translates to: HFDKKTTPKTNLFVHFMNRVQGK*VFCKGN
Trigger: GTTCCCTTTACAAAACACCAACTTTCCTTGCACTCT...GTTCATGAAATGGACAAATAGGTTAGTCTTGGGTGTGGTCTTTTTGTCAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACACAAGAGTTGTGTTTCTaGGAGGGTGTTGCTTCATTG +
Preference number: 5 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTQELCF*EGVASL
Trigger: CAATGAAGCAACACCCTCCAAGAAACACAACTCTTG...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 90 bp GAAAATTCTGATGTCACTGTACATAACTTTTCTCCACTCCCTAAATaGAATATGGTGGTTGTGTTCAGGTATTGGCCACAGAAAGCATAC +
Preference number: 5 (lower is better)
Translates to: ENSDVTVHNFSPLPK*NMVVVFRYWPQKAY
Trigger: GTATGCTTTCTGTGGCCAATACCTGAACACAACCACCATATTTCATTTAGGGAGTGGAGAAAAGTTATGTACAGTGACATCAGAATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 90 bp TCTGAGAGCTGCTCTAGTGCATCGAATATTATGACTAGAGGTCTCTaGAGTGAAGACTCATTCAAAAGATTTATAAATAAGTCACAGAGG +
Preference number: 5 (lower is better)
Translates to: SESCSSASNIMTRGL*SEDSFKRFINKSQR
Trigger: CCTCTGTGACTTATTTATAAATCTTTTGAATGAGTCTTCACTGCAGAGACCTCTAGTCATAATATTCGATGCACTAGAGCAGCTCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CTTCACAAAAACAACACACTGATGAAGTTAAAGACCTGTCTAGGAATACACAATTCACTCATTACACTGTaGTCTAGGGCTAACACATCC +
Preference number: 5 (lower is better)
Translates to: LHKNNTLMKLKTCLGIHNSLITL*SRANTS
Trigger: GGATGTGTTAGCCCTAGACAACAGTGTAATGAGTGA...ATTGTGTATTCCTAGACAGGTCTTTAACTTCATCAGTGTGTTGTTTTTGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAAGATTTTTCAAGAAGTaGTTTGGAAGTTGCACGCGC +
Preference number: 5 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTRFFKK*FGSCTR
Trigger: GCGCGTGCAACTTCCAAACAACTTCTTGAAAAATCT...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTCAAGCACCGATATTTTaGCCATCTGCCAGTCTCATT +
Preference number: 5 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSQAPIF*PSASLI
Trigger: AATGAGACTGGCAGATGGCAAAAATATCGGTGCTTG...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTAATAACTGTTACACTTaGGCCTGGAGGTGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSNNCYT*AWRCVL
Trigger: CAACACACACCTCCAGGCCAAAGTGTAACAGTTATT...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACACTCAGAGATGGCATGTaGAGAAAGCTTGCTTTCTAT +
Preference number: 5 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTLRDGM*RKLAFY
Trigger: ATAGAAAGCAAGCTTTCTCAACATGCCATCTCTGAG...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTATTGGCAGTGTGCACTaGGATAATGCATTGTTCACA +
Preference number: 5 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSIGSVH*DNALFT
Trigger: TGTGAACAATGCATTATCCAAGTGCACACTGCCAAT...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTACAATGGAGCAATATTaGGGCCCATCTTTATCACAC +
Preference number: 5 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFTMEQY*GPSLSH
Trigger: GTGTGATAAAGATGGGCCCAAATATTGCTCCATTGT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTACATACTGGCTGCTTTaGTCATCTGATGTCACCATT +
Preference number: 5 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSTYWLL*SSDVTI
Trigger: AATGGTGACATCAGATGACAAAAGCAGCCAGTATGT...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CAGACTTCTGTTAGTACAATGATGGAAATGGACAGGTGTTTTGACCAGATTTGTTATAAATCTAGCACATaGATGTTTTCATCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: QTSVSTMMEMDRCFDQICYKSST*MFSSPL
Trigger: CAGGGGAGATGAAAACATCAATGTGCTAGATTTATA...ACAAATCTGGTCAAAACACCTGTCCATTTCCATCATTGTACTAACAGAAGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTCATTCTGGATACACTTaGACAAAAAGACCACACCCA +
Preference number: 5 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFHSGYT*TKRPHP
Trigger: TGGGTGTGGTCTTTTTGTCAAAGTGTATCCAGAATG...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp ATTTTTGTTACATATTTTGCACCTTTAGACCGTTCACTGCAGACTAGGTGTACAAACCCTCGCATGCAATaGTTGCAACTGTCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: IFVTYFAPLDRSLQTRCTNPRMQ*LQLSFN
Trigger: ATTAAAAGACAGTTGCAACAATTGCATGCGAGGGTT...TGTACACCTAGTCTGCAGTGAACGGTCTAAAGGTGCAAAATATGTAACAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAAATGGACAGGTGTTTaGACCAGATTTGTAATGCCC +
Preference number: 5 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFKWTGV*TRFVMP
Trigger: GGGCATTACAAATCTGGTCAAAACACCTGTCCATTT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp AAATCATATATTCTGTTATACAGAAACCCTCGCATGCAATTGTTGCAACTGTCTCAAGAGGAAATACAATaGACCTGGATTCTCTATGGG +
Preference number: 5 (lower is better)
Translates to: KSYILLYRNPRMQLLQLSQEEIQ*TWILYG
Trigger: CCCATAGAGAATCCAGGTCAATTGTATTTCCTCTTG...AGACAGTTGCAACAATTGCATGCGAGGGTTTCTGTATAACAGAATATATGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp GTCATATCTCTCGGGAAACTGGGAATACACTTGGGTATTTTTGTTACATATTTTAGGAATGAGAATGTGTaGCCTAAAGAGCTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: VISLGKLGIHLGIFVTYFRNENV*PKELKS
Trigger: GCTTTTGAGCTCTTTAGGCAACACATTCTCATTCCT...AAAATATGTAACAAAAATACCCAAGTGTATTCCCAGTTTCCCGAGAGATATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATATGTCTGAAAGCACTTaGTCAAACTGGCCAATTTTG +
Preference number: 5 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNMSEST*SNWPIL
Trigger: CAAAATTGGCCAGTTTGACAAAGTGCTTTCAGACAT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS-3UTR CAA 90 bp CATTTAATTCTTAGAAATGTGTGGCATGGAGGTTCAACTGATAATGACAGGAATACTATTCCTTCATGCTaGAATACTGCTTCGATGAAG +
Preference number: 5 (lower is better)
Translates to: HLILRNVWHGGSTDNDRNTIPSC*NTASMK
Trigger: CTTCATCGAAGCAGTATTCAAGCATGAAGGAATAGT...ATTCCTGTCATTATCAGTTGAACCTCCATGCCACACATTTCTAAGAATTAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp GCGCGGCTCAGAGCCGCTCCGAGCCCGAAGCGCCTTTaGCGAGCTCCGTGGCGCACAGCACCCGCCGGCGAG +
Preference number: 6 (lower is better)
Translates to: ARLRAAPSPKRL*RAPWRTAPAGE
Trigger: CTCGCCGGCGGGTGCTGTGCGCCACGGAGCTCGCCAAAGGCGCTTCGGGCTCGGAGCGGCTCTGAGCCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp GGCGCGGCTCAGAGCCGCTCCGAGCCCGAAGCGCCTTaGGCGAGCTCCGTGGCGCACAGCACCCGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: GAAQSRSEPEAP*ASSVAHSTRRR
Trigger: TCGCCGGCGGGTGCTGTGCGCCACGGAGCTCGCCAAAGGCGCTTCGGGCTCGGAGCGGCTCTGAGCCGCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp CTTCGCCCGCTGCTAGGGCTCCGAGCAGCAGCCAGCTaGAGCGGGAGGTCAGCGTGGCGGCGGCTACGCGCG +
Preference number: 6 (lower is better)
Translates to: LRPLLGLRAAAS*SGRSAWRRLRA
Trigger: CGCGCGTAGCCGCCGCCACGCTGACCTCCCGCTCCAGCTGGCTGCTGCTCGGAGCCCTAGCAGCGGGCGAAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp AGCTTGGTGCCCGCGCCGGCCGGCCACATCGCCCTCTaGGAGGAACAGCCACTGCCGCCGCCGCCACCTCCT +
Preference number: 6 (lower is better)
Translates to: SLVPAPAGHIAL*EEQPLPPPPPP
Trigger: AGGAGGTGGCGGCGGCGGCAGTGGCTGTTCCTCCCAGAGGGCGATGTGGCCGGCCGGCGCGGGCACCAAGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp CATACGGACCCTCGGGCTCCTGTCGCGGCGGTCTCCTaGCCTTCTGGGCCTCCGCCTTCGCCCGCTGCTAGG +
Preference number: 6 (lower is better)
Translates to: HTDPRAPVAAVS*PSGPPPSPAAR
Trigger: CCTAGCAGCGGGCGAAGGCGGAGGCCCAGAAGGGCAGGAGACCGCCGCGACAGGAGCCCGAGGGTCCGTATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp GCCGCTCCGAGCCCGAAGCGCCTTTGGCGAGCTCCGTaGCGCACAGCACCCGCCGGCGAGGAGAAGCCATAC +
Preference number: 6 (lower is better)
Translates to: AAPSPKRLWRAP*RTAPAGEEKPY
Trigger: GTATGGCTTCTCCTCGCCGGCGGGTGCTGTGCGCCACGGAGCTCGCCAAAGGCGCTTCGGGCTCGGAGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp GGTAGCGACCATCCCGAGACAACCTCTGCCGCCAGATaGTCCCAGAGGCGTGAACCACCCGCAATTTACCAC +
Preference number: 6 (lower is better)
Translates to: GSDHPETTSAAR*SQRREPPAIYH
Trigger: GTGGTAAATTGCGGGTGGTTCACGCCTCTGGGATCATCTGGCGGCAGAGGTTGTCTCGGGATGGTCGCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp TGCTGGCCTGATGTGACCTTCCTTTTGACGCGCAGCAGCTGGTGTTaGAGGACCTGGCTGCACATCTTCCTGTCTCGGGGAATCAGCTCG +
Preference number: 6 (lower is better)
Translates to: CWPDVTFLLTRSSWC*RTWLHIFLSRGISS
Trigger: CGAGCTGATTCCCCGAGACAGGAAGATGTGCAGCCAGGTCCTCAAACACCAGCTGCTGCGCGTCAAAAGGAAGGTCACATCAGGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp TGCAGACCCTGTGGCCTGTGGCGAGCCTCCAAACCCTaGAGGCATTTTCCTCACAGAGCGAGACCACAAACT +
Preference number: 6 (lower is better)
Translates to: CRPCGLWRASKP*RHFPHRARPQT
Trigger: AGTTTGTGGTCTCGCTCTGTGAGGAAAATGCCTCCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp GGCCATCCGTACAGCAGATCGATGACAGTGACATCTTaGCTGGCTTCGAGCCATGCAAGGGCGTGGTTGGCG +
Preference number: 6 (lower is better)
Translates to: GHPYSRSMTVTS*LASSHARAWLA
Trigger: CGCCAACCACGCCCTTGCATGGCTCGAAGCCAGCAAAGATGTCACTGTCATCGATCTGCTGTACGGATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp GGAAAGGACTATCCGGACAAAGCGGGGCAGGTGAGCTaGGAGCCACCAAAGCTTCCTGGCATCATCATTCTC +
Preference number: 6 (lower is better)
Translates to: GKDYPDKAGQVS*EPPKLPGIIIL
Trigger: GAGAATGATGATGCCAGGAAGCTTTGGTGGCTCCCAGCTCACCTGCCCCGCTTTGTCCGGATAGTCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp TCAGGTTCCAGGGGATTACACTGGAAAACCCAGGGCTaGTCTGGAGCCTGCCTGTCAAAGGAAGCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: SGSRGLHWKTQG*SGACLSKEACS
Trigger: GGAACAGGCTTCCTTTGACAGGCAGGCTCCAGACCAGCCCTGGGTTTTCCAGTGTAATCCCCTGGAACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp GCAAAGTGGTCAGAATGTTGCAGACCCTGTGGCCTGTaGCGAGCCTCCAAACCCTGGAGGCATTTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: AKWSECCRPCGL*RASKPWRHFPH
Trigger: GTGAGGAAAATGCCTCCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCTGCAACATTCTGACCACTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp GATGTGACCTTCCTTTTGACGCGCAGCAGCTGGTGTTaGAGGACCTGGCTGCACATCTTCCTGTCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: DVTFLLTRSSWC*RTWLHIFLSRG
Trigger: TCCCCGAGACAGGAAGATGTGCAGCCAGGTCCTCAAACACCAGCTGCTGCGCGTCAAAAGGAAGGTCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp ACGGTGACAGAGAGGGAGGATTCATCGACGTCTTTGTaGGATCTCCAGTGCCTCACCTCCCTGAAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: TVTEREDSSTSL*DLQCLTSLKVR
Trigger: CCTGACCTTCAGGGAGGTGAGGCACTGGAGATCTCACAAAGACGTCGATGAATCCTCCCTCTCTGTCACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp TTGGGCAGGGAGCTTACAACAGGCAGCAGTCTTTGCTaGAGCTCTGCTGAAAGGGAGCCGGGAAATGCAGTG +
Preference number: 6 (lower is better)
Translates to: LGRELTTGSSLC*SSAEREPGNAV
Trigger: CACTGCATTTCCCGGCTCCCTTTCAGCAGAGCTTCAGCAAAGACTGCTGCCTGTTGTAAGCTCCCTGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp TGGCCACAGAAAGCATACAGACCATCCAGGGAGCACTaGACGCACGTCACTTCATACCAGCAGTGGAACTGG +
Preference number: 6 (lower is better)
Translates to: WPQKAYRPSREH*THVTSYQQWNW
Trigger: CCAGTTCCACTGCTGGTATGAAGTGACGTGCGTCCAGTGCTCCCTGGATGGTCTGTATGCTTTCTGTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp GCATTCTGCAAAGTGGTCAGAATGTTGCAGACCCTGTaGCCTGTGGCGAGCCTCCAAACCCTGGAGGCATTT +
Preference number: 6 (lower is better)
Translates to: AFCKVVRMLQTL*PVASLQTLEAF
Trigger: AAATGCCTCCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCTGCAACATTCTGACCACTTTGCAGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp AGCTCTGCTGAAAGGGAGCCGGGAAATGCAGTGACCTaGTTTTTGATGCTGCGGAGGGTGTTGGCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SSAEREPGNAVT*FLMLRRVLARN
Trigger: GTTCCTGGCCAACACCCTCCGCAGCATCAAAAACAAGGTCACTGCATTTCCCGGCTCCCTTTCAGCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp TTCATGCCCAGGATGACAGACTGGGCTGTGGTGATTTaGCTGAGTAGCTGTCGAGTCTCTACATCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: FMPRMTDWAVVI*LSSCRVSTSQV
Trigger: CACCTGGGATGTAGAGACTCGACAGCTACTCAGGCAAATCACCACAGCCCAGTCTGTCATCCTGGGCATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp GTATTTGCGGAGGTAATAAAGGCATTCTGCAAAGTGGTCAGAATGTaGCAGACCCTGTGGCCTGTGGCGAGCCTCCAAACCCTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: VFAEVIKAFCKVVRM*QTLWPVASLQTLEA
Trigger: TGCCTCCAGGGTTTGGAGGCTCGCCACAGGCCACAGGGTCTGCAACATTCTGACCACTTTGCAGAATGCCTTTATTACCTCCGCAAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp CGACGTCTTTGTGAGATCTCCAGTGCCTCACCTCCCTaGAGGTCAGGTTCACAAACATTGGCAGTGTGCACT +
Preference number: 6 (lower is better)
Translates to: RRLCEISSASPP*RSGSQTLAVCT
Trigger: AGTGCACACTGCCAATGTTTGTGAACCTGACCTTCAGGGAGGTGAGGCACTGGAGATCTCACAAAGACGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp GGTCATTGTCATCCTGCAGATATAGCTTCTGGGCTATaGGCTGCAGGTGTCTGTTGGCCCAGACTAGGAGTG +
Preference number: 6 (lower is better)
Translates to: GHCHPADIASGL*AAGVCWPRLGV
Trigger: CACTCCTAGTCTGGGCCAACAGACACCTGCAGCTCATAGCCCAGAAGCTATATCTGCAGGATGACAATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp CGAGACAACCTCTGCCGCCAGATGATCCCAGAGGCGTaGACCACCCGCAATTTACCACTGTATAAATCTAGC +
Preference number: 6 (lower is better)
Translates to: RDNLCRQMIPEA*TTRNLPLYKSS
Trigger: GCTAGATTTATACAGTGGTAAATTGCGGGTGGTTCACGCCTCTGGGATCATCTGGCGGCAGAGGTTGTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp GGATTACACTGGAAAACCCAGGGCTGGTCTGGAGCCTaGCTGTCAAAGGAAGCCTGTTCCATGAAGTGCTTT +
Preference number: 6 (lower is better)
Translates to: GLHWKTQGWSGA*LSKEACSMKCF
Trigger: AAAGCACTTCATGGAACAGGCTTCCTTTGACAGGCAGGCTCCAGACCAGCCCTGGGTTTTCCAGTGTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp TTAGTTTCTGCAAGATCCCATGTTTGTTGGGCAGCGTaGAAAGGACTATCCGGACAAAGCGGGGCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: LVSARSHVCWAA*KGLSGQSGAGE
Trigger: CTCACCTGCCCCGCTTTGTCCGGATAGTCCTTTCCACGCTGCCCAACAAACATGGGATCTTGCAGAAACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp TCACGCAGGTCATTGTCATCCTGCAGATATAGCTTCTaGGCTATGAGCTGCAGGTGTCTGTTGGCCCAGACT +
Preference number: 6 (lower is better)
Translates to: SRRSLSSCRYSF*AMSCRCLLAQT
Trigger: AGTCTGGGCCAACAGACACCTGCAGCTCATAGCCCAGAAGCTATATCTGCAGGATGACAATGACCTGCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp TCATCACTGGTGAGTTTCATGCCCAGGATGACAGACTaGGCTGTGGTGATTTGCCTGAGTAGCTGTCGAGTC +
Preference number: 6 (lower is better)
Translates to: SSLVSFMPRMTD*AVVICLSSCRV
Trigger: GACTCGACAGCTACTCAGGCAAATCACCACAGCCCAGTCTGTCATCCTGGGCATGAAACTCACCAGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp GAGTTCTCATCTCGACAGTACCACTCCTCCAGCAACTaGGTCTCCAGCTTTGCCTCTATGGCGGCATCCAAA +
Preference number: 6 (lower is better)
Translates to: EFSSRQYHSSSN*VSSFASMAASK
Trigger: TTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTGGTACTGTCGAGATGAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp GCTGGCACCGAGTTCTCATCTCGACAGTACCACTCCTCCAGCAACTaGGTCTCCAGCTTTGCCTCTATGGCGGCATCCAAAATCATTTCA +
Preference number: 6 (lower is better)
Translates to: AGTEFSSRQYHSSSN*VSSFASMAASKIIS
Trigger: TGAAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTGGTACTGTCGAGATGAGAACTCGGTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp GGGAAGACGCTCTGGGCTGTATGTCACATCCATGGATaGATGCAGTGGTACAATGGAGCAATATTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: GKTLWAVCHIHG*MQWYNGAIFGP
Trigger: GGGCCCAAATATTGCTCCATTGTACCACTGCATTCATCCATGGATGTGACATACAGCCCAGAGCGTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp TTGTCATCCTGCAGATATAGCTTCTGGGCTATGAGCTaGAGGTGTCTGTTGGCCCAGACTAGGAGTGTGACA +
Preference number: 6 (lower is better)
Translates to: LSSCRYSFWAMS*RCLLAQTRSVT
Trigger: TGTCACACTCCTAGTCTGGGCCAACAGACACCTGCAGCTCATAGCCCAGAAGCTATATCTGCAGGATGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp ATCGATGACAGTGACATCTTTGCTGGCTTCGAGCCATaGAAGGGCGTGGTTGGCGGACAGTGTAAATCCATT +
Preference number: 6 (lower is better)
Translates to: IDDSDIFAGFEP*KGVVGGQCKSI
Trigger: AATGGATTTACACTGTCCGCCAACCACGCCCTTGCATGGCTCGAAGCCAGCAAAGATGTCACTGTCATCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp AGTTCTCATCTCGACAGTACCACTCCTCCAGCAACTTaGTCTCCAGCTTTGCCTCTATGGCGGCATCCAAAA +
Preference number: 6 (lower is better)
Translates to: SSHLDSTTPPAT*SPALPLWRHPK
Trigger: TTTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTGGTACTGTCGAGATGAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp GGAGCCTGCCTGTCAAAGGAAGCCTGTTCCATGAAGTaGTTTTCTTCCTCCAGCAAACTTCTGTTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: GACLSKEACSMK*FSSSSKLLFSK
Trigger: CTTGGAGAACAGAAGTTTGCTGGAGGAAGAAAAGCACTTCATGGAACAGGCTTCCTTTGACAGGCAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp TCTCATCTCGACAGTACCACTCCTCCAGCAACTTGGTCTCCAGCTTaGCCTCTATGGCGGCATCCAAAATCATTTCAAACTCTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: SHLDSTTPPATWSPA*PLWRHPKSFQTLRL
Trigger: AAGCCTCAGAGTTTGAAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTGGTACTGTCGAGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp CAGAGCTCATGTCTGTCGTTCCTAGAAATCTCACGATaGCTACTGGGTCAGATTCTGGTCCTGTGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: QSSCLSFLEISR*LLGQILVLCPH
Trigger: ATGAGGACACAGGACCAGAATCTGACCCAGTAGTCATCGTGAGATTTCTAGGAACGACAGACATGAGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp ACAGTACCACTCCTCCAGCAACTTGGTCTCCAGCTTTaGCTCTATGGCGGCATCCAAAATCATTTCAAACTC +
Preference number: 6 (lower is better)
Translates to: TVPLLQQLGLQL*LYGGIQNHFKL
Trigger: GAGTTTGAAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTGGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp AAGATGGTGTGCATTTCACGCAGGTCATTGTCATCCTaGAGATATAGCTTCTGGGCTATGAGCTGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: KMVCISRRSLSS*RYSFWAMSCRC
Trigger: ACACCTGCAGCTCATAGCCCAGAAGCTATATCTGCAGGATGACAATGACCTGCGTGAAATGCACACCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp AGACGCTCTGGGCTGTATGTCACATCCATGGATGAATaGAGTGGTACAATGGAGCAATATTTGGGCCCATCT +
Preference number: 6 (lower is better)
Translates to: RRSGLYVTSMDE*SGTMEQYLGPS
Trigger: AGATGGGCCCAAATATTGCTCCATTGTACCACTGCATTCATCCATGGATGTGACATACAGCCCAGAGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp ACTCCTCCAGCAACTTGGTCTCCAGCTTTGCCTCTATaGCGGCATCCAAAATCATTTCAAACTCTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: TPPATWSPALPL*RHPKSFQTLRL
Trigger: AAGCCTCAGAGTTTGAAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp GACAGTACCACTCCTCCAGCAACTTGGTCTCCAGCTTaGCCTCTATGGCGGCATCCAAAATCATTTCAAACT +
Preference number: 6 (lower is better)
Translates to: DSTTPPATWSPA*PLWRHPKSFQT
Trigger: AGTTTGAAATGATTTTGGATGCCGCCATAGAGGCAAAGCTGGAGACCAAGTTGCTGGAGGAGTGGTACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp TTAGACAGCACGGCAGATATAAAGCGTTCGTTGTGCTaGGCTCTGAACTTTTCAGCCACCTTCCACAGACCA +
Preference number: 6 (lower is better)
Translates to: LDSTADIKRSLC*ALNFSATFHRP
Trigger: TGGTCTGTGGAAGGTGGCTGAAAAGTTCAGAGCCAAGCACAACGAACGCTTTATATCTGCCGTGCTGTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp TCACCACTGCTGGTGTGCCAGACATACTGGCTGCTTTaGTCATCTGATGTCACCATTATATCTCCGGTGGAT +
Preference number: 6 (lower is better)
Translates to: SPLLVCQTYWLL*SSDVTIISPVD
Trigger: ATCCACCGGAGATATAATGGTGACATCAGATGACAAAAGCAGCCAGTATGTCTGGCACACCAGCAGTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp GGATTGCTGGGTCTGGTGTTTTCTTTGAGCTCACTCATTACACTGTaGTCTAGGGCTAACACATCCTCCAGTTCCATTTCACTCAGACCC +
Preference number: 6 (lower is better)
Translates to: GLLGLVFSLSSLITL*SRANTSSSSISLRP
Trigger: GGGTCTGAGTGAAATGGAACTGGAGGATGTGTTAGCCCTAGACAACAGTGTAATGAGTGAGCTCAAAGAAAACACCAGACCCAGCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp TGCCTCTATGGCGGCATCCAAAATCATTTCAAACTCTaGGGCTTCAACTTCTCCAGGGATTCGGATATTCCC +
Preference number: 6 (lower is better)
Translates to: CLYGGIQNHFKL*GFNFSRDSDIP
Trigger: GGGAATATCCGAATCCCTGGAGAAGTTGAAGCCTCAGAGTTTGAAATGATTTTGGATGCCGCCATAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp CTGTCTTCTCTTCGGCAATCAAAGTCATCAGTCAGCTaGGGGCTGGAAATGTCCTCAGTATTCCAAACAGAA +
Preference number: 6 (lower is better)
Translates to: LSSLRQSKSSVS*GLEMSSVFQTE
Trigger: TTCTGTTTGGAATACTGAGGACATTTCCAGCCCCCAGCTGACTGATGACTTTGATTGCCGAAGAGAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp AGGACCAGAATAACTGCTCTATACTTTCATGAACGGTaGCAGAGAGGGAGGATTCATCGACGTCTTTGTGAG +
Preference number: 6 (lower is better)
Translates to: RTRITALYFHER*QRGRIHRRLCE
Trigger: CTCACAAAGACGTCGATGAATCCTCCCTCTCTGTCACCGTTCATGAAAGTATAGAGCAGTTATTCTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp TTCTCCAAGGACCAGAATAACTGCTCTATACTTTCATaGACGGTGACAGAGAGGGAGGATTCATCGACGTCT +
Preference number: 6 (lower is better)
Translates to: FSKDQNNCSILS*TVTEREDSSTS
Trigger: AGACGTCGATGAATCCTCCCTCTCTGTCACCGTTCATGAAAGTATAGAGCAGTTATTCTGGTCCTTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp CACCAAAGCTTCCTGGCATCATCATTCTCTGAGAGCTaGTCTAGTGCATCGAATATTATGACTAGAGGTCTC +
Preference number: 6 (lower is better)
Translates to: HQSFLASSFSES*SSASNIMTRGL
Trigger: GAGACCTCTAGTCATAATATTCGATGCACTAGAGCAGCTCTCAGAGAATGATGATGCCAGGAAGCTTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp TTCATCCCTGAGTTTTATCAGCTTCTCTTGGGCTTCTaGGTCCCGAATAATCCTCGGTTCTGTTCCAGTTAT +
Preference number: 6 (lower is better)
Translates to: FIPEFYQLLLGF*VPNNPRFCSSY
Trigger: ATAACTGGAACAGAACCGAGGATTATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAAACTCAGGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp ATAAGGGAAGACGCTCTGGGCTGTATGTCACATCCATaGATGAATGCAGTGGTACAATGGAGCAATATTTGG +
Preference number: 6 (lower is better)
Translates to: IREDALGCMSHP*MNAVVQWSNIW
Trigger: CCAAATATTGCTCCATTGTACCACTGCATTCATCCATGGATGTGACATACAGCCCAGAGCGTCTTCCCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp TTCACGATGGTGGTCCCATCTTCACAGCAAAATTTCTaGGTGATACTTCCTGTCCAAAGACTGACTGCCAAC +
Preference number: 6 (lower is better)
Translates to: FTMVVPSSQQNF*VILPVQRLTAN
Trigger: GTTGGCAGTCAGTCTTTGGACAGGAAGTATCACCAAGAAATTTTGCTGTGAAGATGGGACCACCATCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp AAAAGGTTTTCACCACTGCTGGTGTGCCAGACATACTGGCTGCTTTaGTCATCTGATGTCACCATTATATCTCCGGTGGATGTTAACACA +
Preference number: 6 (lower is better)
Translates to: KRFSPLLVCQTYWLL*SSDVTIISPVDVNT
Trigger: TGTGTTAACATCCACCGGAGATATAATGGTGACATCAGATGACAAAAGCAGCCAGTATGTCTGGCACACCAGCAGTGGTGAAAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp CACTTTGCTTTTAGTCATTCCCACCACGAAGGTATTTaGGGAGGTAATAAAGGCATTCTGCAAAGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: HFAFSHSHHEGI*GGNKGILQSGQ
Trigger: CTGACCACTTTGCAGAATGCCTTTATTACCTCCGCAAATACCTTCGTGGTGGGAATGACTAAAAGCAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp GGAATAAATTCATCCCTGAGTTTTATCAGCTTCTCTTaGGCTTCTGGGTCCCGAATAATCCTCGGTTCTGTT +
Preference number: 6 (lower is better)
Translates to: GINSSLSFISFS*ASGSRIILGSV
Trigger: AACAGAACCGAGGATTATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAAACTCAGGGATGAATTTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp AGGAATAAATTCATCCCTGAGTTTTATCAGCTTCTCTaGGGCTTCTGGGTCCCGAATAATCCTCGGTTCTGT +
Preference number: 6 (lower is better)
Translates to: RNKFIPEFYQLL*GFWVPNNPRFC
Trigger: ACAGAACCGAGGATTATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAAACTCAGGGATGAATTTATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp GGTCTGGTGTTTTCTTTGAGCTCACTCATTACACTGTaGTCTAGGGCTAACACATCCTCCAGTTCCATTTCA +
Preference number: 6 (lower is better)
Translates to: GLVFSLSSLITL*SRANTSSSSIS
Trigger: TGAAATGGAACTGGAGGATGTGTTAGCCCTAGACAACAGTGTAATGAGTGAGCTCAAAGAAAACACCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp CCATCTTTATCACACTCTAAAAGAAGATGTCTAAGTTaGGGCAGGGAGCTTACAACAGGCAGCAGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: PSLSHSKRRCLS*GRELTTGSSLC
Trigger: GCAAAGACTGCTGCCTGTTGTAAGCTCCCTGCCCAAACTTAGACATCTTCTTTTAGAGTGTGATAAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp ATCCAGGGAGTAAATGATTTCCCCTCTAGCAGGCAACAACAGACTTaGGATGGGTTTTCCAGTCTTATCTATGTTGGACATAGCTGTGAT +
Preference number: 6 (lower is better)
Translates to: IQGVNDFPSSRQQQT*DGFSSLIYVGHSCD
Trigger: ATCACAGCTATGTCCAACATAGATAAGACTGGAAAACCCATCCAAAGTCTGTTGTTGCCTGCTAGAGGGGAAATCATTTACTCCCTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp CACACAGTGTTCAACTATTCCTTCATGCTTGAATACTaGTTCGATGAAGCCACTGCTGAAGTTCCACTTATG +
Preference number: 6 (lower is better)
Translates to: HTVFNYSFMLEY*FDEATAEVPLM
Trigger: CATAAGTGGAACTTCAGCAGTGGCTTCATCGAAGCAGTATTCAAGCATGAAGGAATAGTTGAACACTGTGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp ACCACCCGCAATTTACCACTGTATAAATCTAGCACATaGATGTTTTCATCTCCCCTGGCTATAATGCCTAGC +
Preference number: 6 (lower is better)
Translates to: TTRNLPLYKSST*MFSSPLAIMPS
Trigger: GCTAGGCATTATAGCCAGGGGAGATGAAAACATCAATGTGCTAGATTTATACAGTGGTAAATTGCGGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp CATTCTCTGAGAGCTGCTCTAGTGCATCGAATATTATaGCTAGAGGTCTCTGCAGTGAAGACTCATTCAAAA +
Preference number: 6 (lower is better)
Translates to: HSLRAALVHRIL*LEVSAVKTHSK
Trigger: TTTTGAATGAGTCTTCACTGCAGAGACCTCTAGTCATAATATTCGATGCACTAGAGCAGCTCTCAGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp GATGTCACTGTACATAACTTTTCTCCACTCCCTAAATaGAATATGGTGGTTGTGTTCAGGTATTGGCCACAG +
Preference number: 6 (lower is better)
Translates to: DVTVHNFSPLPK*NMVVVFRYWPQ
Trigger: CTGTGGCCAATACCTGAACACAACCACCATATTTCATTTAGGGAGTGGAGAAAAGTTATGTACAGTGACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp GAGACCACAAACTGGTCATTGTGTGTAATCAGCAGCTaGGATATTCTCTGCCCGTTAATTCGAAAAAGGTTT +
Preference number: 6 (lower is better)
Translates to: ETTNWSLCVISS*DILCPLIRKRF
Trigger: AAACCTTTTTCGAATTAACGGGCAGAGAATATCTCAGCTGCTGATTACACACAATGACCAGTTTGTGGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp AAATTTCTTGGTGATACTTCCTGTCCAAAGACTGACTaGCAACACTTTGCTTTTAGTCATTCCCACCACGAA +
Preference number: 6 (lower is better)
Translates to: KFLGDTSCPKTD*QHFAFSHSHHE
Trigger: TTCGTGGTGGGAATGACTAAAAGCAAAGTGTTGGCAGTCAGTCTTTGGACAGGAAGTATCACCAAGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp TCTGATATCTCTTGCCATGTCTTCTCGTTTTCAGCATaGGTAGAAGGCTGCATTGCATTTCTATTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: SDISCHVFSFSA*VEGCIAFLLLL
Trigger: GAGAAGCAATAGAAATGCAATGCAGCCTTCTACCAATGCTGAAAACGAGAAGACATGGCAAGAGATATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp GTAAATGATTTCCCCTCTAGCAGGCAACAACAGACTTaGGATGGGTTTTCCAGTCTTATCTATGTTGGACAT +
Preference number: 6 (lower is better)
Translates to: VNDFPSSRQQQT*DGFSSLIYVGH
Trigger: ATGTCCAACATAGATAAGACTGGAAAACCCATCCAAAGTCTGTTGTTGCCTGCTAGAGGGGAAATCATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp GATGTTAACACACAGTGTTCAACTATTCCTTCATGCTaGAATACTGCTTCGATGAAGCCACTGCTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: DVNTQCSTIPSC*NTASMKPLLKF
Trigger: GAACTTCAGCAGTGGCTTCATCGAAGCAGTATTCAAGCATGAAGGAATAGTTGAACACTGTGTGTTAACATC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp AACAATAGTAGGAATAAATTCATCCCTGAGTTTTATCAGCTTCTCTaGGGCTTCTGGGTCCCGAATAATCCTCGGTTCTGTTCCAGTTAT +
Preference number: 6 (lower is better)
Translates to: NNSRNKFIPEFYQLL*GFWVPNNPRFCSSY
Trigger: ATAACTGGAACAGAACCGAGGATTATTCGGGACCCAGAAGCCCAAGAGAAGCTGATAAAACTCAGGGATGAATTTATTCCTACTATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS TCA 72 bp GAAAGACTTCCTTCACTGTCTACCATGACCATTTCCTaGGCTGTGTCCAAGATAAGAAGAAACTTCACAAAT +
Preference number: 6 (lower is better)
Translates to: ERLPSLSTMTIS*AVSKIRRNFTN
Trigger: ATTTGTGAAGTTTCTTCTTATCTTGGACACAGCTCAGGAAATGGTCATGGTAGACAGTGAAGGAAGTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS GCA 72 bp GCCTTAAATATCTTCTTGATCTCATCTGATATCTCTTaGCATGTCTTCTCGTTTTCAGCATTGGTAGAAGGC +
Preference number: 6 (lower is better)
Translates to: ALNIFLISSDIS*HVFSFSALVEG
Trigger: GCCTTCTACCAATGCTGAAAACGAGAAGACATGGCAAGAGATATCAGATGAGATCAAGAAGATATTTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CCA 72 bp CTGTACATAACTTTTCTCCACTCCCTAAATGAAATATaGTGGTTGTGTTCAGGTATTGGCCACAGAAAGCAT +
Preference number: 6 (lower is better)
Translates to: LYITFLHSLNEI*WLCSGIGHRKH
Trigger: ATGCTTTCTGTGGCCAATACCTGAACACAACCACCATATTTCATTTAGGGAGTGGAGAAAAGTTATGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp TCGTGTAACAGCTTTACAGCAGCCTTAAATATCTTCTaGATCTCATCTGATATCTCTTGCCATGTCTTCTCG +
Preference number: 6 (lower is better)
Translates to: SCNSFTAALNIF*ISSDISCHVFS
Trigger: CGAGAAGACATGGCAAGAGATATCAGATGAGATCAAGAAGATATTTAAGGCTGCTGTAAAGCTGTTACACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp TCCATGGATGAATGCAGTGGTACAATGGAGCAATATTaGGGCCCATCTTTATCACACTCTAAAAGAAGATGT +
Preference number: 6 (lower is better)
Translates to: SMDECSGTMEQY*GPSLSHSKRRC
Trigger: ACATCTTCTTTTAGAGTGTGATAAAGATGGGCCCAAATATTGCTCCATTGTACCACTGCATTCATCCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp CTGTTACACTTTGGCCTGGAGGTGTGTGTTGCATTGTaGAAAATTTGTCTGCTATTTGAAGTGGCAATTTTG +
Preference number: 6 (lower is better)
Translates to: LLHFGLEVCVAL*KICLLFEVAIL
Trigger: CAAAATTGCCACTTCAAATAGCAGACAAATTTTCAACAATGCAACACACACCTCCAGGCCAAAGTGTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp TTACCCTTTTCGTGTAACAGCTTTACAGCAGCCTTAAATATCTTCTaGATCTCATCTGATATCTCTTGCCATGTCTTCTCGTTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: LPFSCNSFTAALNIF*ISSDISCHVFSFSA
Trigger: TGCTGAAAACGAGAAGACATGGCAAGAGATATCAGATGAGATCAAGAAGATATTTAAGGCTGCTGTAAAGCTGTTACACGAAAAGGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 90 bp TATGTCACATCCATGGATGAATGCAGTGGTACAATGGAGCAATATTaGGGCCCATCTTTATCACACTCTAAAAGAAGATGTCTAAGTTTG +
Preference number: 6 (lower is better)
Translates to: YVTSMDECSGTMEQY*GPSLSHSKRRCLSL
Trigger: CAAACTTAGACATCTTCTTTTAGAGTGTGATAAAGATGGGCCCAAATATTGCTCCATTGTACCACTGCATTCATCCATGGATGTGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6
CDS CAA 72 bp ATCATAGAGTGTATCAGTTTCAGTGTCAAAATTCTGTaGTATCGTTGCCTGAATTATATCAATCATGTCCTC +
Preference number: 6 (lower is better)
Translates to: IIECISFSVKIL*YRCLNYINHVL
Trigger: GAGGACATGATTGATATAATTCAGGCAACGATACAACAGAATTTTGACACTGAAACTGATACACTCTATGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309447.6