RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NWD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000188039

Ensembl transcript IDs: ENST00000379808.7, ENST00000438489.6, ENST00000518676.5, ENST00000524140.7, ENST00000549814.5, ENST00000552788.1, ENST00000646016.2, ENST00000673671.1, ENST00000673758.1, ENST00000673803.1, ENST00000674033.1, ENST00000674103.1

Found 2759 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTaGAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCAGCGGGA +
Preference number: 1 (lower is better)
Translates to: ARGPRGAARVSAPGG*RVGAWLPLRWWPAG
Trigger: TCCCGCTGGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCGGTGGTGGCCAGCGGGACAGGCACG +
Preference number: 1 (lower is better)
Translates to: ATRSCPCVCSRRVQS*CVASSAVVASGTGT
Trigger: CGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp ACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTGGTGGCCAGCGGGACAGGCACGGTG +
Preference number: 1 (lower is better)
Translates to: TRSCPCVCSRRVQSW*VASSAVVASGTGTV
Trigger: CACCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp GGTGCGTGGCTTCCTCTGCGGTGGTGGCCAGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCAGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: GAWLPLRWWPAGQAR*KRPISGLPQTPASA
Trigger: GGCTGAGGCTGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCACGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp GACGAAGCCGCACCCACAGCAGGGGCGGGAAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTCGGTACACATCCTGCAGGACCTCGT +
Preference number: 1 (lower is better)
Translates to: DEAAPTAGAGSAAAP*WAGSNLGTHPAGPR
Trigger: ACGAGGTCCTGCAGGATGTGTACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTTCCCGCCCCTGCTGTGGGTGCGGCTTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GAAGCCGCACCCACAGCAGGGGCGGGAAGCGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGT +
Preference number: 1 (lower is better)
Translates to: EAAPTAGAGSAAAPC*AGSNLGTHPAGPRR
Trigger: ACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTTCCCGCCCCTGCTGTGGGTGCGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp CCTGGGTTCCCACACTCTGGGAGGCTGGCCCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTCCTTGCAGCTGCCAGCAGGAGTTGG +
Preference number: 1 (lower is better)
Translates to: PGFPHSGRLAQSKSV*TGLSVLLAAASRSW
Trigger: CCAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTGGGAACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GCCTCCGGGCCTCCTGGGCTCCAGAGCGTAGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGGCCTCCCCAGTACCTGGTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: ASGPPGLQSVGQKLR*PPLVHRPPQYLVPA
Trigger: TGCAGGCACCAGGTACTGGGGAGGCCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR TCA 90 bp GCCACGCCAACTCCTGTCCGGCCGTATCCAGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCCTCACCACAAACTGCTCACCCAGCT +
Preference number: 1 (lower is better)
Translates to: ATPTPVRPYPAHGGV*GPGDWPSPQTAHPA
Trigger: AGCTGGGTGAGCAGTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGACAGGAGTTGGCGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp TGCTGCCCAAGCCGGGCCAGGAGTTCCTGGCGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGCCAAAGGTGGTGGCGGATCTCTTGG +
Preference number: 1 (lower is better)
Translates to: CCPSRARSSWRPQKV*MTSELCQRWWRISW
Trigger: CCAAGAGATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACGCCAGGAACTCCTGGCCCGGCTTGGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp GAAGAAGTCGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGACCACCTCGACCAGCTGTCTGTGGGC +
Preference number: 1 (lower is better)
Translates to: EEVGQDAMPLGSLGS*QVALTDHLDQLSVG
Trigger: GCCCACAGACAGCTGGTCGAGGTGGTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGACTTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp TCCCAGAGACACAGCAGGGCATCCTCAGACCCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGG +
Preference number: 1 (lower is better)
Translates to: SQRHSRASSDPLTTS*SLWLTSTQATRLLW
Trigger: CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCTGCTGTGTCTCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GGCTCCAGGTCCCTGAGAAGAAGTCGGCCAGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACAGGTAGCGCTCACGGACCACCTCGA +
Preference number: 1 (lower is better)
Translates to: GSRSLRRSRPGRHAS*LSRILTGSAHGPPR
Trigger: TCGAGGTGGTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp CCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGTCCCACCAGTGCTGGATGTGAGGTG +
Preference number: 1 (lower is better)
Translates to: PRGTSTGCAHNWNQL*ACWHSCPTSAGCEV
Trigger: CACCTCACATCCAGCACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp CACAGCAGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAG +
Preference number: 1 (lower is better)
Translates to: HSRASSDPLTTSCSL*LTSTQATRLLWVSK
Trigger: CTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp GCCCAAGCCGGGCCAGGAGTTCCTGGCGTCCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAAGGTGGTGGCGGATCTCTTGGTAGA +
Preference number: 1 (lower is better)
Translates to: AQAGPGVPGVRRRSE*PPSSAKGGGGSLGR
Trigger: TCTACCAAGAGATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACGCCAGGAACTCCTGGCCCGGCTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp CACCCGGGACCTATGAGCATCGCTGAGATCCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGC +
Preference number: 1 (lower is better)
Translates to: HPGPMSIAEIPDLER*GLWGSRCHQSPAAG
Trigger: GCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGATGCTCATAGGTCCCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR GCA 90 bp CGCAGCAGCTCCTTGCTGGGCGGGGTCCAATCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCC +
Preference number: 1 (lower is better)
Translates to: RSSSLLGGVQSRYTS*RTSSSRDKTSFSSA
Trigger: GGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GTGTGCACCGGGCTCAGCGTCCTCCTTGCAGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCC +
Preference number: 1 (lower is better)
Translates to: VCTGLSVLLAAASRS*IICWPWFPERGFTS
Trigger: GGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGCCCGGTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GCTTCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCTATGAGCATCGCTGAGATCCCAGAC +
Preference number: 1 (lower is better)
Translates to: ASIVGHCGEAGAVQK*CRHPGPMSIAEIPD
Trigger: GTCTGGGATCTCAGCGATGCTCATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR TCA 90 bp AGCTGGAGGGCTTCACGGACCAGGCCAACCTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAGTCATCCAGCAGGTCTTCAATGCCC +
Preference number: 1 (lower is better)
Translates to: SWRASRTRPTSGESR*GAHRSKSSSRSSMP
Trigger: GGGCATTGAAGACCTGCTGGATGACTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGAGGTTGGCCTGGTCCGTGAAGCCCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp AGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGGGAGGGGGAATGCATATCACGTCCT +
Preference number: 1 (lower is better)
Translates to: RRWPGGPRTCSGTCS*LLSGPREGECISRP
Trigger: AGGACGTGATATGCATTCCCCCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp AGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATCAGGGCTGTCTTTCCAATGCCTGGG +
Preference number: 1 (lower is better)
Translates to: SRRTVTVLCPSSLGI*SASLHIRAVFPMPG
Trigger: CCCAGGCATTGGAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp CTCATTTGTGACGTCCCCAGCAGCCGCAGGACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGG +
Preference number: 1 (lower is better)
Translates to: LICDVPSSRRTVTVL*PSSLGICSASLHIR
Trigger: CCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTGGGGACGTCACAAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp GCTGGCCCAGAGCAAATCTGTGTGCACCGGGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCC +
Preference number: 1 (lower is better)
Translates to: AGPEQICVHRAQRPP*SCQQELDHLLALVS
Trigger: GGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTGGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp TCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATGAGCATCGCTGAGATCCCAGACCTT +
Preference number: 1 (lower is better)
Translates to: SIVGHCGEAGAVQKW*RHPGPMSIAEIPDL
Trigger: AAGGTCTGGGATCTCAGCGATGCTCATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR GCA 90 bp GATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGGGGGAATGCATATCACGTCCTGCCT +
Preference number: 1 (lower is better)
Translates to: DGQAVLALAQGHAVD*FPGLGRGNAYHVLP
Trigger: AGGCAGGACGTGATATGCATTCCCCCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp CCCCAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTTGCACATCAGGGCTGTCTTTCCAAT +
Preference number: 1 (lower is better)
Translates to: PQQPQDGHCLVPQQP*HLLSQLAHQGCLSN
Trigger: ATTGGAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp GTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTATaGGCATCGCTGAGATCCCAGACCTTGAAAGATGAGGACTGTGGG +
Preference number: 1 (lower is better)
Translates to: VRPVRSRNGAGTRDL*ASLRSQTLKDEDCG
Trigger: CCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGATGCTCATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR GCA 90 bp CTGTCAGCAGGGTGCCGTGTAGCTCATCTCGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACACAGCAGGGCATCCTCAGACCCGCT +
Preference number: 1 (lower is better)
Translates to: LSAGCRVAHLEFPLA*LQVPETQQGILRPA
Trigger: AGCGGGTCTGAGGATGCCCTGCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGATGAGCTACACGGCACCCTGCTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646016.2
3UTR CCA 90 bp CTGGTTCACAGGCCTCCCCAGTACCTGGTGCCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGTCCCTCTGGAAGTATCGTGCCACCA +
Preference number: 1 (lower is better)
Translates to: LVHRPPQYLVPAGRR*EETHSRPSGSIVPP
Trigger: TGGTGGCACGATACTTCCAGAGGGACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCCTGTGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CCA 90 bp CACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATGCACATCCAAGGATCAGAGGCATCT +
Preference number: 1 (lower is better)
Translates to: HRLTTPSLDTVSSVA*EASTAMHIQGSEAS
Trigger: AGATGCCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp AAGTGGCAGAGTGATGAGCTTCTTGGTACCCTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGA +
Preference number: 1 (lower is better)
Translates to: KWQSDELLGTLAPGP*EEVGQDAMPLGSLG
Trigger: TCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCTCATCACTCTGCCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp GACGTAGGTGGGAGGAAACGCATTCTCGTCCCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACTTGGCCTGGCAGTCAGATGGTCCCT +
Preference number: 1 (lower is better)
Translates to: DVGGRKRILVPLEVS*HQLQVTWPGSQMVP
Trigger: AGGGACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGGGACGAGAATGCGTTTCCTCCCACCTACGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR GCA 90 bp CCAGAGCAAATCTGTGTGCACCGGGCTCAGCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAG +
Preference number: 1 (lower is better)
Translates to: PEQICVHRAQRPPCS*QQELDHLLALVSGK
Trigger: CTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GCTGTCCCACCAGTGCTGGATGTGAGGTGGCGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACAGGAGGCTCCTCTCCATGCCTCGGA +
Preference number: 1 (lower is better)
Translates to: AVPPVLDVRWRRNGV*PAVLCTGGSSPCLG
Trigger: TCCGAGGCATGGAGAGGAGCCTCCTGTACACAGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTCACATCCAGCACTGGTGGGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GGTCCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTAAAAGGTGT +
Preference number: 1 (lower is better)
Translates to: GPHWSCCRPRGSPSE*PRWRGSRAAECKRC
Trigger: ACACCTTTTACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp CAATTTTGGGGAAGTAGACGTAGCTTCCATTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAT +
Preference number: 1 (lower is better)
Translates to: QFWGSRRSFHCGTLR*GRCGPEMVQAPGTY
Trigger: ATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGCTACGTCTACTTCCCCAAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR TCA 90 bp TTGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTCTATCTCCCACTCAATGACTGCCAC +
Preference number: 1 (lower is better)
Translates to: LDLSKEDGGSLFPVL*AQQAPLYLPLNDCH
Trigger: GTGGCAGTCATTGAGTGGGAGATAGAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR CCA 90 bp AAGTATCGTGCCACCAGCTCCAGGTCACTTGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGA +
Preference number: 1 (lower is better)
Translates to: KYRATSSRSLGLAVR*SLNTSHSFSSIREG
Trigger: TCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGGTGGCACGATACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CCA 90 bp TCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGCAAG +
Preference number: 1 (lower is better)
Translates to: SKFLQETVWRRVWKN*TTLVWASRTWAGGK
Trigger: CTTGCCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp TCTGGGCCTGTTGGCATAGCTGTCCCACCAGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGGCCAGCAGTTCTGTGTACAGGAGGC +
Preference number: 1 (lower is better)
Translates to: SGPVGIAVPPVLDVR*RRNGVWPAVLCTGG
Trigger: GCCTCCTGTACACAGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTCACATCCAGCACTGGTGGGACAGCTATGCCAACAGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCTGAGTGTAAAAGGTGTATCTTGGCC +
Preference number: 1 (lower is better)
Translates to: WSCCRPRGSPSEWPR*RGSRAAECKRCILA
Trigger: GGCCAAGATACACCTTTTACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp GTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGGGGCCACCTTTCGGTCCAAGTTCAG +
Preference number: 1 (lower is better)
Translates to: VIGQLLQLPQVCNRM*EPQRLRGHLSVQVQ
Trigger: CTGAACTTGGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp CACACAGGTCAAAGTCATCCAGCAGGTCTTCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTT +
Preference number: 1 (lower is better)
Translates to: HTGQSHPAGLQCPQR*PGRKSSSCCPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGGATGACTTTGACCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp ATTCTCGTCCCTCTGGAAGTATCGTGCCACCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTCCCTCAATACCTCCCACTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: ILVPLEVSCHQLQVT*PGSQMVPQYLPLLL
Trigger: GAGAAGGAGTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGGGACGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CCA 90 bp TCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCC +
Preference number: 1 (lower is better)
Translates to: SSRSTRDSKFLQETV*RRVWKNWTTLVWAS
Trigger: GGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp TGGCATAGCTGTCCCACCAGTGCTGGATGTGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCTGTGTACAGGAGGCTCCTCTCCATG +
Preference number: 1 (lower is better)
Translates to: WHSCPTSAGCEVAKK*SLASSSVYRRLLSM
Trigger: CATGGAGAGGAGCCTCCTGTACACAGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTCACATCCAGCACTGGTGGGACAGCTATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp AAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCGAGTCCGCCAAGAATATCCGCACCG +
Preference number: 1 (lower is better)
Translates to: KQPSPPCLHVPDPWP*IGESPSSPPRISAP
Trigger: CGGTGCGGATATTCTTGGCGGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp CCCGGTCCTCTGAGCTCAGCAGGCTCCGCTCTATCTCCCACTCAATaGCTGCCACCATGTAAGATGTGCCTCTTTGCTTCTCCTTTGCCT +
Preference number: 1 (lower is better)
Translates to: PGPLSSAGSALSPTQ*LPPCKMCLFASPLP
Trigger: AGGCAAAGGAGAAGCAAAGAGGCACATCTTACATGGTGGCAGTCATTGAGTGGGAGATAGAGCGGAGCCTGCTGAGCTCAGAGGACCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR GCA 90 bp CACCTCACCTCTCCTGTGTGTCCAGTTAGCATGTGGATCACATGCTaGTCTTCCATGTCCCACACAGCCATGATGCCATCCTGGGTGCCA +
Preference number: 1 (lower is better)
Translates to: HLTSPVCPVSMWITC*SSMSHTAMMPSWVP
Trigger: TGGCACCCAGGATGGCATCATGGCTGTGTGGGACATGGAAGAGCAGCATGTGATCCACATGCTAACTGGACACACAGGAGAGGTGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp TCTGCAGTAAGAACTCGTGTAGCTCATCTCGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACACAGCAGGGCATCCTCAGACCCGCT +
Preference number: 1 (lower is better)
Translates to: SAVRTRVAHLEFPLA*LQVPETQQGILRPA
Trigger: AGCGGGTCTGAGGATGCCCTGCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGATGAGCTACACGAGTTCTTACTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR CCA 90 bp AGCCGGTCCACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCC +
Preference number: 1 (lower is better)
Translates to: SRSTILRAQSSRMCL*RSWISLRKTVAPCS
Trigger: GGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGTGGACCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp ACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCA +
Preference number: 1 (lower is better)
Translates to: TRDSKFLQETVWRRV*KNWTTLVWASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp ACACACCTCACCTCTCCTGTGTGTCCAGTTAGCATGTGGATCACATaGTGCTCTTCCATGTCCCACACAGCCATGATGCCATCCTGGGTG +
Preference number: 1 (lower is better)
Translates to: THLTSPVCPVSMWIT*CSSMSHTAMMPSWV
Trigger: CACCCAGGATGGCATCATGGCTGTGTGGGACATGGAAGAGCAGCATGTGATCCACATGCTAACTGGACACACAGGAGAGGTGAGGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp ACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTCT +
Preference number: 1 (lower is better)
Translates to: TILRAQSSRMCLWRS*ISLRKTVAPCSRSS
Trigger: AGAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp CCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTaGAAGTTGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGC +
Preference number: 1 (lower is better)
Translates to: PHRQLGSCGSPRETL*KLHTRKERGPHWSC
Trigger: GCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp CTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGA +
Preference number: 1 (lower is better)
Translates to: LWKLHTRKERGPHWS*CRPRGSPSEWPRWR
Trigger: TCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp GGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGAC +
Preference number: 1 (lower is better)
Translates to: GNSAPVGLQGKRFGS*TLVKKEVPIGHAVD
Trigger: GTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGC +
Preference number: 1 (lower is better)
Translates to: ETLWKLHTRKERGPH*SCCRPRGSPSEWPR
Trigger: GCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp CACTCCTTCTCATCGATCCGCGAGGGAATCAGACAGGGGCCGTACTaGTCACCGATGAGGGCCTGGCCATGGTACTTTTCTTTACTTTTT +
Preference number: 1 (lower is better)
Translates to: HSFSSIREGIRQGPY*SPMRAWPWYFSLLF
Trigger: AAAAAGTAAAGAAAAGTACCATGGCCAGGCCCTCATCGGTGATCAGTACGGCCCCTGTCTGATTCCCTCGCGGATCGATGAGAAGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438489.6
3UTR TCA 90 bp TTTGATGCTGGACATATGTTGCTTCCCCTGAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAG +
Preference number: 1 (lower is better)
Translates to: FDAGHMLLPLKFSRS*APQTDHTIPGHCQQ
Trigger: CTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTTCAGGGGAAGCAACATATGTCCAGCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp CCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCCAGGTaGATGGAAGTGTCTAGATTAGTCACTAGCTCCTGTGAGCATTTG +
Preference number: 1 (lower is better)
Translates to: PSTCPVSVSPCCSPR*MEVSRLVTSSCEHL
Trigger: CAAATGCTCACAGGAGCTAGTGACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR GCA 90 bp ACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCACTAGCTCC +
Preference number: 1 (lower is better)
Translates to: TQSLPSTCPVSVSPC*SPRCMEVSRLVTSS
Trigger: GGAGCTAGTGACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 90 bp GAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGA +
Preference number: 1 (lower is better)
Translates to: EEGLIFRDHQEPHSI*KLLQQSVPFGGNQR
Trigger: TCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GCAATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATaGACAAACTGGACTGTCAGCAGGGTGCCATCCAGCACACTCCAA +
Preference number: 1 (lower is better)
Translates to: AMKPLVVGMILFTTA*TNWTVSRVPSSTLQ
Trigger: TTGGAGTGTGCTGGATGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR CCA 90 bp GCAATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATaGACAAACTGGACTGTCAGCAGGGTGCCGTGTAGCTCATCTCGA +
Preference number: 1 (lower is better)
Translates to: AMKPLVVGMILFTTA*TNWTVSRVPCSSSR
Trigger: TCGAGATGAGCTACACGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646016.2
3UTR GCA 90 bp TCCAAGTCCTGGGGAGCTCCTGCAGCTGCAACTAGCTCCTCTCTCTaGCTGGATTTGACCATCCACATTGCCTTCTTGAAGTTCTTAAGA +
Preference number: 1 (lower is better)
Translates to: SKSWGAPAAATSSSL*LDLTIHIAFLKFLR
Trigger: TCTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAGAGGAGCTAGTTGCAGCTGCAGGAGCTCCCCAGGACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR CCA 90 bp GATCAGATAACCATGCCTGGTGGGGGCAATGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCACAGCATGGACAAACTGGACTGTCAG +
Preference number: 1 (lower is better)
Translates to: DQITMPGGGNEATGG*DDSVYHSMDKLDCQ
Trigger: CTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGCATGGTTATCTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp CAGGTAGGTGTTTCTTCTTTGATGCTGGACATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAGCTCCACAGACTGACCACACCATCC +
Preference number: 1 (lower is better)
Translates to: QVGVSSLMLDICCFP*SFPVAELHRLTTPS
Trigger: GGATGGTGTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTTCAGGGGAAGCAACATATGTCCAGCATCAAAGAAGAAACACCTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp GAGATGGAGCCATTGCTAAACCCGGTAACAAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGAC +
Preference number: 1 (lower is better)
Translates to: EMEPLLNPVTSFPCF*TETAQVGVSSLMLD
Trigger: GTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGCAATGGCTCCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp GGAGCCATTGCTAAACCCGGTAACAAGCTTTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATATG +
Preference number: 1 (lower is better)
Translates to: GAIAKPGNKLSLLLD*DGTGRCFFFDAGHM
Trigger: CATATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGCAATGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp AGTGCAGCGTGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTaGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCAGTTA +
Preference number: 1 (lower is better)
Translates to: SAACNPLKQSWRGSL*QIFSHTSPLLCVQL
Trigger: TAACTGGACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 90 bp ACCAAAGAGATGGAGCCATTGCTAAACCCGGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATG +
Preference number: 1 (lower is better)
Translates to: TKEMEPLLNPVTSFP*FWTETAQVGVSSLM
Trigger: CATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 90 bp AGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTC +
Preference number: 1 (lower is better)
Translates to: RVSSTSAACNPLKQS*RGSLWQIFSHTSPL
Trigger: GAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 90 bp ATGGGACAGAAGGCTCACTCTCAGAGCTCTTGCACCTTGGACTTGTaGCCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGTTTCCT +
Preference number: 1 (lower is better)
Translates to: MGQKAHSQSSCTLDL*PESNYNYFRKAQFP
Trigger: AGGAAACTGAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAGAGCTCTGAGAGTGAGCCTTCTGTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 90 bp AGTTTGCATCTCAGGAGTAATCTCTTCTATTCTCAGTCCCAGTGGTaGACATTGGATCAGTCTAGCCGATTAGAGCTCTGCATTCTCCCA +
Preference number: 1 (lower is better)
Translates to: SLHLRSNLFYSQSQW*TLDQSSRLELCILP
Trigger: TGGGAGAATGCAGAGCTCTAATCGGCTAGACTGATCCAATGTCCACCACTGGGACTGAGAATAGAAGAGATTACTCCTGAGATGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 90 bp TCCAGTTTGCATCTCAGGAGTAATCTCTTCTATTCTCAGTCCCAGTaGTGGACATTGGATCAGTCTAGCCGATTAGAGCTCTGCATTCTC +
Preference number: 1 (lower is better)
Translates to: SSLHLRSNLFYSQSQ*WTLDQSSRLELCIL
Trigger: GAGAATGCAGAGCTCTAATCGGCTAGACTGATCCAATGTCCACCACTGGGACTGAGAATAGAAGAGATTACTCCTGAGATGCAAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 90 bp AAGATCCTGAGACCAAGATTGATCAGGAACATGGCTGAACTATCTTaGATCAGTAAAACAGCCTTTCTCAGAGCCGAGGGACCAGAGGTT +
Preference number: 1 (lower is better)
Translates to: KILRPRLIRNMAELS*ISKTAFLRAEGPEV
Trigger: AACCTCTGGTCCCTCGGCTCTGAGAAAGGCTGTTTTACTGATCCAAGATAGTTCAGCCATGTTCCTGATCAATCTTGGTCTCAGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR TCA 90 bp ATAAAAGTCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTaGCAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGT +
Preference number: 1 (lower is better)
Translates to: IKVWISGFAYYNWKH*QQWACLAMVILGYS
Trigger: ACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 90 bp GGATCAGATGACAGCACCTACAGCTTTATAAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCC +
Preference number: 1 (lower is better)
Translates to: GSDDSTYSFINCEVL*STSVICCISHSSVP
Trigger: GGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGTGCTGTCATCTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 90 bp ATCAGTAAAACAGCCTTTCTCAGAGCCGAGGGACCAGAGGTTGACTaGTTTGGCATTTGCAAGAAATGCAGACTGTTGCATTTTTGCCAA +
Preference number: 1 (lower is better)
Translates to: ISKTAFLRAEGPEVD*FGICKKCRLLHFCQ
Trigger: TTGGCAAAAATGCAACAGTCTGCATTTCTTGCAAATGCCAAACCAGTCAACCTCTGGTCCCTCGGCTCTGAGAAAGGCTGTTTTACTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR GCA 90 bp TACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTaGTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTACCAGA +
Preference number: 1 (lower is better)
Translates to: YSFINCEVLWSTSVI*CISHSSVPPSSGTR
Trigger: TCTGGTACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 90 bp ATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTGCATCTCAGGAGTAATCTCTTCTAT +
Preference number: 1 (lower is better)
Translates to: ISDLLYLTFIRSPFI*YQNSSLHLRSNLFY
Trigger: ATAGAAGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR TCA 90 bp AGGCTGTGGAGATGGACACAGGCATTTAAAATCAGAATTTGTAGGTaGAATCTTAATTGGTCTCAACATCTACTTTATTTCTGCATTGGG +
Preference number: 1 (lower is better)
Translates to: RLWRWTQAFKIRICR*NLNWSQHLLYFCIG
Trigger: CCCAATGCAGAAATAAAGTAGATGTTGAGACCAATTAAGATTTCACCTACAAATTCTGATTTTAAATGCCTGTGTCCATCTCCACAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR CAA 90 bp GGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGCGGTGGTGGCCAGCGGGACAGGCAC +
Preference number: 2 (lower is better)
Translates to: GHEELPVCLLQAGAE*VRGFLCGGGQRDRH
Trigger: GTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGGAGAACCACAGAGGCTaGGGGGCCACCTTTCGGTCC +
Preference number: 2 (lower is better)
Translates to: QPLRVARRGPPGGWRNPPENHRG*GATFRS
Trigger: GGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTC...CGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp CGACGAAGCCGCACCCACAGCAGGGGCGGGAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCTCGGTACACATCCTGCAGGACCTCG +
Preference number: 2 (lower is better)
Translates to: RRSRTHSRGGKRSSS*LGGVQSRYTSCRTS
Trigger: CGAGGTCCTGCAGGATGTGTACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTTCCCGCCCCTGCTGTGGGTGCGGCTTCGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 2 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 2 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 2 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CCAGCACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGATCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: PARGPRGAARVSAPGGCRSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...TCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 2 (lower is better)
Translates to: QPLRVARRGPPGGWRNPPTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...CGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: AAESCPEGSSRGLEESSESDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACTGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: RPGRHASWLSRILTGSAHWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGAGACAGGGGCCGTACTaGTCACCGATGAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRRQGPY*SPMRAW
Trigger: CCAGGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438489.6
3UTR-3UTR TCA 90 bp CAAGTAGTATCCCAGATCCCGACGAAGCCGCACCCACAGCAGGGGCGGGAAGCGGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 2 (lower is better)
Translates to: QVVSQIPTKPHPQQGREAAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...CGCTTCCCGCCCCTGCTGTGGGTGCGGCTTCGTCGGGATCTGGGATACTACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 2 (lower is better)
Translates to: AAESCPEGSSRGLEESSERRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECCGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CCAGCACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 2 (lower is better)
Translates to: PARGPRGAARVSAPGGCRMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...TCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CCAGCACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGATGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: PARGPRGAARVSAPGGCRCLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...TCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 2 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 2 (lower is better)
Translates to: RPGRHASWLSRILTGSAHSLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACACTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 2 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 2 (lower is better)
Translates to: GMEKLDHPGVGVQNLGRGLFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...CCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 2 (lower is better)
Translates to: GMEKLDHPGVGVQNLGRGAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...CCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 2 (lower is better)
Translates to: VCSRRVQSWCVASSAVVAGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 2 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp AGACACAGCAGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTaGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: RHSRASSDPLTTSCS*WLTSTQATRLLWVS
Trigger: GGAGACCCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCTGCTGTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCCGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVRPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 2 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TGTGGCCTGGGAGGCCAGCACGGCCATGCACATCCAAGGATCAGAGGCATCTCCGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 2 (lower is better)
Translates to: CGLGGQHGHAHPRIRGISGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...GGAGATGCCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACACCCATGCCATGGCGGTaGTGCCTTTGTGACAGCCGC +
Preference number: 2 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTPMPWR*CLCDSR
Trigger: GCGGCTGTCACAAAGGCATCACCGCCATGGCATGGG...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GTGACAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCCGAGGGACCAGAGGTTaGCTGGTTTGGCATTTGCAA +
Preference number: 2 (lower is better)
Translates to: VTAAESCPEGSSRGLEESRGTRG*LVWHLQ
Trigger: TTGCAAATGCCAAACCAGTCAACCTCTGGTCCCTCG...GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR GCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATC +
Preference number: 2 (lower is better)
Translates to: VCSRRVQSWCVASSAVVASSLGI*SASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCT...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTGGGCAATGGCCAGGAGGGTGAAGCCATCCACGGGCCGCCGGGCCAAGTAGTACAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 2 (lower is better)
Translates to: VGNGQEGEAIHGPPGQVVQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...TACTACTTGGCCCGGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCGGTCTTGAGGACCCCTaGGTGCATGTCAGTGATGTG +
Preference number: 2 (lower is better)
Translates to: VCSRRVQSWCVASSAVVAGLEDP*VHVSDV
Trigger: CACATCACTGACATGCACCCAGGGGTCCTCAAGACC...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 2 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp CGTCCTCCTTGCAGCTGCCAGCAGGAGTTGGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGCCTCCGGGTC +
Preference number: 2 (lower is better)
Translates to: RPPCSCQQELDHLLA*VSGKGLHLPVGLRV
Trigger: GACCCGGAGGCCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGAGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 2 (lower is better)
Translates to: LPKPAARRDSSSETTRNLLFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...GAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGTCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 2 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCACTGTGGGGAAGCAGATaGCACCAAAGCCCCGCCGCG +
Preference number: 2 (lower is better)
Translates to: DVVIGDGQAVLALAQGHALWGSR*HQSPAA
Trigger: CGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAG...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GGTCTTCAATGCCCCCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: GLQCPQRCPGRKSSSCCPRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...TGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTTGTTGTCATAGGCGATaGCCAGGCGGTCCTCGCACT +
Preference number: 2 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECCCHRR*PGGPRT
Trigger: AGTGCGAGGACCGCCTGGCCATCGCCTATGACAACA...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp GGTCTGAATGACCTCCGAGCTCTGCCAAAGGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTCCTGTCCGGCCGTATCCAGCTCACG +
Preference number: 2 (lower is better)
Translates to: GLNDLRALPKVVADL*VEPRQLLSGRIQLT
Trigger: CGTGAGCTGGATACGGCCGGACAGGAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCATTCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp GAGCTCATTTGTGACGTCCCCAGCAGCCGCAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATC +
Preference number: 2 (lower is better)
Translates to: ELICDVPSSRRTVTV*CPSSLGICSASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTGGGGACGTCACAAATGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp GGCTGGCCCAGAGCAAATCTGTGTGCACCGGGCTCAGCGTCCTCCTaGCAGCTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: GWPRANLCAPGSASS*QLPAGVGSSAGLGF
Trigger: GAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTGGGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGTCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: RTSSSRDKTSFSSASERPSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGCGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGRPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 2 (lower is better)
Translates to: HDAILGANHQQLLLHTPCGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CAGCGGGACAGGCACGGTGAAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCAGGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 2 (lower is better)
Translates to: QRDRHGERGPFPGFLKRQVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...CTGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ACCACCAGCTGCTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 2 (lower is better)
Translates to: TTSCSLWLTSTQATRLLWVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CAAGTAGTATCCCAGATCCCGACGAAGCCGCACCCACAGCAGGGGCGGGAAGCGCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: QVVSQIPTKPHPQQGREARPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...CGCTTCCCGCCCCTGCTGTGGGTGCGGCTTCGTCGGGATCTGGGATACTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGAGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 2 (lower is better)
Translates to: LPKPAARRDSSSETTRNLSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...GAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 2 (lower is better)
Translates to: DLPKPAARRDSSSETTRNSLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...GTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp ACCACCAGCTGCTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGCTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: TTSCSLWLTSTQATRLLWLLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTGGGCAATGGCCAGGAGGGTGAAGCCATCCACGGGCCGCCGGGCCAAGTAGTAGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 2 (lower is better)
Translates to: VGNGQEGEAIHGPPGQVVVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...TACTACTTGGCCCGGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VCSRRVQSWCVASSAVVASWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 2 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp GGGAACACAAGGACGACCCCCGACACGAGGCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCCAGACACCTGATCTCACTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GNTRTTPDTRPVNRS*RCSATSRHLISLEV
Trigger: CACCTCCAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGTGTCGGGGGTCGTCCTTGTGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 2 (lower is better)
Translates to: GPRGAARVSAPGGCRVGAVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...CGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 2 (lower is better)
Translates to: GMEKLDHPGVGVQNLGRGRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...CCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CGCCAAGAATATCCGCACCGATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: RQEYPHRSSKACGEEGLISGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...GATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATCGGTGCGGATATTCTTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACACACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 2 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ACGAGGCCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCCTCCCCAGTACCTGGTaGCTGCAGGACGTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: TRPVNRSLRCSATSRHLILPSTW*LQDVGG
Trigger: CCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAG...GATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR GCA 90 bp GCTGCGGGGCCACCTTTCGGTCCAAGTTCAGTGGTTTCCCCACAAGTGGCAGAGTGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: AAGPPFGPSSVVSPQVAECLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...CTCTGCCACTTGTGGGGAAACCACTGAACTTGGACCGAAAGGTGGCCCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCATCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 2 (lower is better)
Translates to: DVVIGDGQAVLALAQGHASRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQARPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGATCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 2 (lower is better)
Translates to: GMEKLDHPGVGVQNLGRGRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...CCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: HDAILGANHQQLLLHTPCSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGCAGGCGGTGGGTCTTaGGGACCCCTGGGTGCATGT +
Preference number: 2 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRAGGGS*GPLGAC
Trigger: ACATGCACCCAGGGGTCCTCAAGACCCACCGCCTGC...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GTGGGCAATGGCCAGGAGGGTGAAGCCATCCACGGGCCGCCGGGCCAAGTAGTACCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: VGNGQEGEAIHGPPGQVVPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...TACTACTTGGCCCGGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TGTGCGCACAACTGGAACCAGCTCTGGGCCTGTTGGCATAGCTGTCCCACCAGTGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: CAHNWNQLWACWHSCPTSALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ACCACCAGCTGCTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: TTSCSLWLTSTQATRLLWSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TTGCAACCGTATGTGAGAACCACAGAGGCTGCGGGGCCACCTTTCGGTCCAAGTTCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 2 (lower is better)
Translates to: LQPYVRTTEAAGPPFGPSSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...ACTTGGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGCTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 2 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTACTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 2 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 2 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 2 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQACLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACAGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LARVPLANIFTHLTSPVCGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...ACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 2 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 2 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGGCCTCCCCAGCCATGTaGAATTGTGAGTCCATTAAA +
Preference number: 2 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMASPAM*NCESIK
Trigger: TTTAATGGACTCACAATTCCACATGGCTGGGGAGGC...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR CAA 90 bp CCGAGTGAAGCAGGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACCACAGAGGCTGCGGGGCCACCTTTC +
Preference number: 2 (lower is better)
Translates to: PSEAGDRATPSASAG*QPYVRTTEAAGPPF
Trigger: GAAAGGTGGCCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACCTGCTTCACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: GDRATPSASAGLQPYVRTAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 2 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGAGCCTCCTGAGTAACTaGGATTACAGGCACTCACCA +
Preference number: 2 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQASLLSN*DYRHSP
Trigger: TGGTGAGTGCCTGTAATCTCAGTTACTCAGGAGGCT...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTATGCTGTCATCGTGCCTaGGCTGCTGCCCAAGCCGGG +
Preference number: 2 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVCCHRA*AAAQAG
Trigger: CCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCA...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TTGCAACCGTATGTGAGAACCACAGAGGCTGCGGGGCCACCTTTCGGTCCAAGTGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 2 (lower is better)
Translates to: LQPYVRTTEAAGPPFGPSVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...ACTTGGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGAGGAGTTGGATCATCTaGTGGCCTTGGTTTCCGGAA +
Preference number: 2 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALRSWII*WPWFPE
Trigger: TTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCT...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 2 (lower is better)
Translates to: QQPQDGHCLVPQQPWHLLEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...GAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 2 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCATCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQARSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACACGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCCCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 2 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCCACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 2 (lower is better)
Translates to: HDAILGANHQQLLLHTPCHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: DVVIGDGQAVLALAQGHASFLVP*LQVPEK
Trigger: CTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCT...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCTGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVCPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp CATTCTCGTCCCTCTGGAAGTATCGTGCCACCAGCTCCAGGTCACTaGGCCTGGCAGTCAGATGGTCCCTCAATACCTCCCACTCCTTCT +
Preference number: 2 (lower is better)
Translates to: HSRPSGSIVPPAPGH*AWQSDGPSIPPTPS
Trigger: AGAAGGAGTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGGGACGAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CAA 90 bp GCGAGCCGGTCCACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCTCTAAGGAAGACGGTGGCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: ASRSTILRAQSSRMC*WRSWISLRKTVAPC
Trigger: ACAGGGAGCCACCGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGTGGACCGGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 2 (lower is better)
Translates to: LARVPLANIFTHLTSPVCAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...ACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGCTATCTCCCACTCAATaGCTGCCACCATGTAAGATG +
Preference number: 2 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALLSPTQ*LPPCKM
Trigger: CATCTTACATGGTGGCAGTCATTGAGTGGGAGATAG...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR GCA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGATCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 2 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRSRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTTGGGCCACGAGGAGCTaGCCGTGTGTCTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSWATRS*PCVCSR
Trigger: CCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCA...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACATTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 2 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTLFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TCCGGCCGTATCCAGCTCACGGAGGCGTGTGAGGACCTGGTGATTGGCCCTCACTTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: SGRIQLTEACEDLVIGPHLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...GTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGGAAACGCATTCTCGTCCCTCTGGAAGTATCGTGCCACCAGCTCCAGGTCACTGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 2 (lower is better)
Translates to: RKRILVPLEVSCHQLQVTGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGGGACGAGAATGCGTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTCTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: STQATRLLWVSKGNALEVLLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 2 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AACATCCTTCAGCTCCGCCTCCGAGAGACCGTGTCGGGAAGACACAATGTAGCCAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 2 (lower is better)
Translates to: NILQLRLRETVSGRHNVARVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...GGCTACATTGTGTCTTCCCGACACGGTCTCTCGGAGGCGGAGCTGAAGGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGATGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRCRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCACCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: DVVIGDGQAVLALAQGHAPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: STQATRLLWVSKGNALEVGSPSE*PRWRGS
Trigger: AGACCCTCTCCAGCGTGGCCATTCTGACGGACTACC...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp CACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTC +
Preference number: 2 (lower is better)
Translates to: HHPKGAVFKDVFVEV*DLSKEDGGSLFPVL
Trigger: GAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: QHIGHHVANLGVASLRMKAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 2 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 2 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTLFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 2 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESTVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 2 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCAGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: ARVPLANIFTHLTSPVCPAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...TGGACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTG +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELRVQSW*VASSAV
Trigger: CACCGCAGAGGAAGCCACGCACCAACTCTGCACCCG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIASCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTCCAGCAGGTCTTCAATaGCCCCAGAGATGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIAPAGLQ*PQRCPG
Trigger: GCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGG...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCAGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 2 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp AACATCCTTCAGCTCCGCCTCCGAGAGACCGTGTCGGGAAGACACAATGTAGCCTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 2 (lower is better)
Translates to: NILQLRLRETVSGRHNVACLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...GGCTACATTGTGTCTTCCCGACACGGTCTCTCGGAGGCGGAGCTGAAGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTTGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 2 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIAWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTAGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 2 (lower is better)
Translates to: DVVIGDGQAVLALAQGHASFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CAGCGGGACAGGCACGGTGAAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCAGTGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 2 (lower is better)
Translates to: QRDRHGERGPFPGFLKRQCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...CTGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGTCTTCAATGCCCCCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 2 (lower is better)
Translates to: GLQCPQRCPGRKSSSCCPVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...TGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CGCCAAGAATATCCGCACCGATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 2 (lower is better)
Translates to: RQEYPHRSSKACGEEGLIALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...GATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATCGGTGCGGATATTCTTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: LARVPLANIFTHLTSPVCSGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...ACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 2 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 2 (lower is better)
Translates to: STSVICCISHSSVPPSSGRGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTATTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCACAACACCTTAGAAGCTaGTGCCCAATACATCCAAGC +
Preference number: 2 (lower is better)
Translates to: DVVIGDGQAVLALAQGHAQHLRS*CPIHPS
Trigger: GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTG...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 2 (lower is better)
Translates to: HSIQQEHERLEVSARDSVTVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESRPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCAGGCACACCTGGAAGCAGATGCTCTTCAGCAGGCCACGGGCATCTGAGCTCAAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 2 (lower is better)
Translates to: PGTPGSRCSSAGHGHLSSNCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...TGAGCTCAGATGCCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 2 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 2 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGCTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 2 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: STSVICCISHSSVPPSSGWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTTGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSCRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: VGLQGKRFGSCTLVKKEVSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...GACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAGAACTCGTGTAGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: VILGEASTLDPSAVRTRVGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...TACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCATGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: DVVIGDGQAVLALAQGHACPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCTCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TGTGCGCACAACTGGAACCAGCTCTGGGCCTGTTGGCATAGCTGTCCCACCAGTAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: CAHNWNQLWACWHSCPTSRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AGGAGGGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 2 (lower is better)
Translates to: RRVWKNWTTLVWASRTWAVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: STSVICCISHSSVPPSSGLAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLLCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLCGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTATCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 2 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 2 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACTCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 2 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIAQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHSCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 2 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTCACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 2 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp GTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAGAACTCGTGTACCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: VILGEASTLDPSAVRTRVPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...TACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438489.6
3UTR-3UTR CCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 2 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAGAACTCGTGTAGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: VILGEASTLDPSAVRTRVAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...TACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: STSVICCISHSSVPPSSGRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCAAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 2 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPSFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 2 (lower is better)
Translates to: DLPKPAARRDSSSETTRNAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...GTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp AGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: RQLGSCGSPRETLWK*HTRKERGPHWSCCR
Trigger: TCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 2 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp ACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACAGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 2 (lower is better)
Translates to: TGNSAPVGLQGKRFGSCTALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...TGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 2 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: STQATRLLWVSKGNALEVPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp ATCCGCGAGCCGGTCCACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTTGTGCCTTTATTAGTGGCATaGGAACAGACTAATACGGCC +
Preference number: 2 (lower is better)
Translates to: IREPVHHPKGAVFKDVFVPLLVA*EQTNTA
Trigger: GGCCGTATTAGTCTGTTCTCATGCCACTAATAAAGG...CACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGTGGACCGGCTCGCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR GCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACATTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGATCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 2 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 2 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGACTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: DVVIGDGQAVLALAQGHARTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATCACTCATGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKSLMLE*SGAISA
Trigger: AGCCGAGATCGCACCACTGCACTCCAGCATGAGTGA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTG +
Preference number: 2 (lower is better)
Translates to: LAPWTCDLNQIITTSARLRVQSW*VASSAV
Trigger: CACCGCAGAGGAAGCCACGCACCAACTCTGCACCCG...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 2 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp GGTCTTCAATGCCCCCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCACCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 2 (lower is better)
Translates to: GLQCPQRCPGRKSSSCCPPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...TGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTCCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 2 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: NCEVLWSTSVICCISHSSCCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHCCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp TTGCAACCGTATGTGAGAACCACAGAGGCTGCGGGGCCACCTTTCGGTCCAAGTTGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACG +
Preference number: 2 (lower is better)
Translates to: LQPYVRTTEAAGPPFGPSCLWRS*ISLRKT
Trigger: CGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACA...ACTTGGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTATGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 2 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVCLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTAGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVVLDVR*RRNGVW
Trigger: CCAGACTCCATTTCTTCGCCACCTCACATCCAGCAC...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAACAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 2 (lower is better)
Translates to: TGSAVSRFQALIFEPDAEQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATAGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 2 (lower is better)
Translates to: CFWTETAQVGVSSLMLDIAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 2 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 2 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 2 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLRVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 2 (lower is better)
Translates to: RTSSSRDKTSFSSASERPNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATATCACTCATGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: CFWTETAQVGVSSLMLDISLMLE*SGAISA
Trigger: AGCCGAGATCGCACCACTGCACTCCAGCATGAGTGA...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACT +
Preference number: 2 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMPLEVS*HQLQVT
Trigger: AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACA +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKEFPLA*LQVPET
Trigger: TGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 2 (lower is better)
Translates to: DLPKPAARRDSSSETTRNFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...GTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 2 (lower is better)
Translates to: VGLQGKRFGSCTLVKKEVIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...GACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 2 (lower is better)
Translates to: EAELARVPLANIFTHLTSIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...AGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 2 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIAIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATACACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 2 (lower is better)
Translates to: CFWTETAQVGVSSLMLDIHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKNWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 2 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCAGGACCAGAGGTTGACTaGTTTGGCATTTGCAAGAAA +
Preference number: 2 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPGPEVD*FGICKK
Trigger: TTTCTTGCAAATGCCAAACCAGTCAACCTCTGGTCC...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR CAA 90 bp ACTAGCTCCTCTCTCTGCCTGGATTTGACCATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCCTGCGGTGAGGCTTTTGCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: TSSSLCLDLTIHIAF*KFLRGSCGEAFAER
Trigger: CCTTTCAGCAAAAGCCTCACCGCAGGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAGAGGAGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR CAA 90 bp AGGTGCATGGAAGTGTCTAGATTAGTCACTAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAAGAGATGGTTGTGCTCTGCAGACTG +
Preference number: 2 (lower is better)
Translates to: RCMEVSRLVTSSCEH*SVVPVEEMVVLCRL
Trigger: CAGTCTGCAGAGCACAACCATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCTAGACACTTCCATGCACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: AFIETLSGIPRRGEGIATLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 2 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLRVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGILAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR GCA 90 bp ACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACAACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 2 (lower is better)
Translates to: TGNSAPVGLQGKRFGSCTTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...TGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 2 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: HDAILGANHQQLLLHTPCFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 2 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHSCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 2 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 2 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGT +
Preference number: 2 (lower is better)
Translates to: STSVICCISHSSVPPSSGGPHWS*CRPRGS
Trigger: ACTACCGCGTGGTCTACAGCATGACCAATGGGGACC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCATTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 2 (lower is better)
Translates to: STSVICCISHSSVPPSSGLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp CTCACATTCATCCGTTCCCCCTTCATCTGGTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTCTTCTATTCTCAGTCCCAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LTFIRSPFIWYQNSS*HLRSNLFYSQSQWW
Trigger: CCACCACTGGGACTGAGAATAGAAGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACGGATGAATGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 90 bp TCTCCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACAC +
Preference number: 2 (lower is better)
Translates to: SPGQRVSSTSAACNP*KQSWRGSLWQIFSH
Trigger: GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCAAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTACAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 2 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 2 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAGAACTCGTGTACCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: VILGEASTLDPSAVRTRVPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...TACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 2 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 2 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 2 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TGTGCGCACAACTGGAACCAGCTCTGGGCCTGTTGGCATAGCTGTCCCACCAGTACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 2 (lower is better)
Translates to: CAHNWNQLWACWHSCPTSTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 2 (lower is better)
Translates to: LAPWTCDLNQIITTSARLGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCAATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 2 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCACAAACTGCTCACCCAGCTCCTTCAGGTAGCAGGCGTGAGTCTTGTTCTTGGCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 2 (lower is better)
Translates to: PQTAHPAPSGSRRESCSWPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...CCAAGAACAAGACTCACGCCTGCTACCTGAAGGAGCTGGGTGAGCAGTTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTCATCCATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 2 (lower is better)
Translates to: VIHSIQQEHERLEVSARDNCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...GTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATGGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCATGAGGGCCTGGCCATaGTACTTTTCTTTACTTTTT +
Preference number: 2 (lower is better)
Translates to: LISLEVSRESCSSPSAKSMRAWP*YFSLLF
Trigger: AAAAAGTAAAGAAAAGTACCATGGCCAGGCCCTCAT...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438489.6
3UTR-3UTR CCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 2 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR CCA 90 bp GTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCTGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: VGLQGKRFGSCTLVKKEVWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...GACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCTGTTTACCACAGCATaGACAAACTGGACTGTCAGC +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELLFTTA*TNWTVS
Trigger: GCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCG +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLTAWTN*TVSRVP
Trigger: CGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646016.2
3UTR CAA 90 bp TCTCCCAGATATAATAATTGGTTTAGGGCTAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGGCTAGGACTGTTGGGAAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: SPRYNNWFRARRMGQ*GPVELRLGLLGKRS
Trigger: GCTTCTCTTTCCCAACAGTCCTAGCCTCAACTCTACTGGTCCCAATTGGCCCATACGCCTAGCCCTAAACCAATTATTATATCTGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 90 bp GTAAAACAGCCTTTCTCAGAGCCGAGGGACCAGAGGTTGACTGGTTaGGCATTTGCAAGAAATGCAGACTGTTGCATTTTTGCCAACAGG +
Preference number: 2 (lower is better)
Translates to: VKQPFSEPRDQRLTG*AFARNADCCIFANR
Trigger: CCTGTTGGCAAAAATGCAACAGTCTGCATTTCTTGCAAATGCCAAACCAGTCAACCTCTGGTCCCTCGGCTCTGAGAAAGGCTGTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR TCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 2 (lower is better)
Translates to: AFIETLSGIPRRGEGIATVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCATTGGGTAAGCCCTTaGTTCACAGAGAAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLHWVSP*FTEKQW
Trigger: CCACTGCTTCTCTGTGAATCAAGGGCTTACCCAATG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCACCTTAGAAGCTGCTaGCCAATACATCCAAGCATA +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELHLRSC*PIHPSI
Trigger: TATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 2 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp GTCATCCATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 2 (lower is better)
Translates to: VIHSIQQEHERLEVSARDFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...GTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATGGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: ENSLTVELAQGRQFKSKASDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTTTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIALVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 2 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 2 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTATCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 2 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp CAAGAAGAAAGAGCCAGCGAGGAGAGGAAGATCCTGAGACCAAGATaGATCAGGAACATGGCTGAACTATCTTGGATCAGTAAAACAGCC +
Preference number: 2 (lower is better)
Translates to: QEERASEERKILRPR*IRNMAELSWISKTA
Trigger: GGCTGTTTTACTGATCCAAGATAGTTCAGCCATGTTCCTGATCAATCTTGGTCTCAGGATCTTCCTCTCCTCGCTGGCTCTTTCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: NCEVLWSTSVICCISHSSLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 2 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAAGACAGGGGCCGTACTaGTCACCGATGAGGGCTTTT +
Preference number: 2 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQRQGPY*SPMRAF
Trigger: AAAAGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646016.2
3UTR-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 2 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 2 (lower is better)
Translates to: WRGSLWQIFSHTSPLLCVPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...GACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 2 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 2 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 2 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 90 bp CATCTCAGGAGTAATCTCTTCTATTCTCAGTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTAGAGCTCTGCATTCTCCCAGATATA +
Preference number: 2 (lower is better)
Translates to: HLRSNLFYSQSQWWT*DQSSRLELCILPDI
Trigger: TATATCTGGGAGAATGCAGAGCTCTAATCGGCTAGACTGATCCAATGTCCACCACTGGGACTGAGAATAGAAGAGATTACTCCTGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 90 bp CTTGGATCAGTAAAACAGCCTTTCTCAGAGCCGAGGGACCAGAGGTaGACTGGTTTGGCATTTGCAAGAAATGCAGACTGTTGCATTTTT +
Preference number: 2 (lower is better)
Translates to: LGSVKQPFSEPRDQR*TGLAFARNADCCIF
Trigger: AAAAATGCAACAGTCTGCATTTCTTGCAAATGCCAAACCAGTCAACCTCTGGTCCCTCGGCTCTGAGAAAGGCTGTTTTACTGATCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 2 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAAAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 2 (lower is better)
Translates to: TGSAVSRFQALIFEPDAEKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 2 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 2 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAAGACTGTTGCATTTTTaGCAACAGGGGATGGATATT +
Preference number: 2 (lower is better)
Translates to: QHIGHHVANLGVASLRMKRLLHF*QQGMDI
Trigger: AATATCCATCCCCTGTTGGCAAAAATGCAACAGTCT...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTTCTCACTGAGGCTGTaGAGATGGACACAGGCATTT +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLFSLRL*RWTQAF
Trigger: AAATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAAAAACTGGACCACCCTaGTGTGGGCGTCCAGAACCT +
Preference number: 2 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKKTGPP*CGRPEP
Trigger: AGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATAATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 2 (lower is better)
Translates to: CFWTETAQVGVSSLMLDIMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: LAPWTCDLNQIITTSARLRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 2 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 2 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTAGCCTCCTGAGTAACTaGGATTACAGGCACTCACCA +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGISLLSN*DYRHSP
Trigger: TGGTGAGTGCCTGTAATCTCAGTTACTCAGGAGGCT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 2 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 2 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIANQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 2 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACT +
Preference number: 2 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNPLEVS*HQLQVT
Trigger: AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLNCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 2 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAACTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 2 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 2 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: LAPWTCDLNQIITTSARLRTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 2 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYILVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 2 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLNCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 2 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYICGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 2 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 2 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 2 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 2 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLNCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 2 (lower is better)
Translates to: ENSLTVELAQGRQFKSKANCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 90 bp CTGTGGGCAAAGAAGAAAGATCCACTTAAGTGGAATGAAAACAGTTaGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: LWAKKKDPLKWNENS*TVELAQGRQFKSKA
Trigger: TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCCACTTAAGTGGATCTTTCTTCTTTGCCCACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 90 bp GTAGGTGAAATCTTAATTGGTCTCAACATCTACTTTATTTCTGCATaGGGTAAGCCCTTGATTCACAGAGAAGCAGTGGCAAAGAGTAGC +
Preference number: 2 (lower is better)
Translates to: VGEILIGLNIYFISA*GKPLIHREAVAKSS
Trigger: GCTACTCTTTGCCACTGCTTCTCTGTGAATCAAGGGCTTACCCAATGCAGAAATAAAGTAGATGTTGAGACCAATTAAGATTTCACCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: LAPWTCDLNQIITTSARLRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYISSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 2 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 2 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 2 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 2 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 2 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 2 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 2 (lower is better)
Translates to: LAPWTCDLNQIITTSARLNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 2 (lower is better)
Translates to: SGFLALLITTGSTDSSGLTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 2 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 2 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGILDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 2 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 2 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 2 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 2 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 2 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR TCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 2 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 2 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGINQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 2 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 2 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR GCA 72 bp CCCAGCACGTGGGCCACGAGGAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCC +
Preference number: 3 (lower is better)
Translates to: PSTWATRSCPCV*SRRVQSWCVAS
Trigger: GGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GTGACAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 3 (lower is better)
Translates to: VTAAESCPEGSSRGLEESCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp GGGGTGTGCTGCTTGCTGTCATCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGTTCCTGGCGTCCGCAG +
Preference number: 3 (lower is better)
Translates to: GVCCLLSSCLSC*PSRARSSWRPQ
Trigger: CTGCGGACGCCAGGAACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCAGCACACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp TGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTGGTGGCCAGCGGGACA +
Preference number: 3 (lower is better)
Translates to: CPCVCSRRVQSW*VASSAVVASGT
Trigger: TGTCCCGCTGGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp CCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTaGAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: PRGAARVSAPGG*RVGAWLPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGGCCAGCGGGACAGGCA +
Preference number: 3 (lower is better)
Translates to: RVSAPGGCRVGA*LPLRWWPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACACACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp TCCATGCCTCGGAGCTCCACAGCAGGGCGGCAGAGCTaGAGGGCTTCACGGACCAGGCCAACCTCAGGGGAG +
Preference number: 3 (lower is better)
Translates to: SMPRSSTAGRQS*RASRTRPTSGE
Trigger: CTCCCCTGAGGTTGGCCTGGTCCGTGAAGCCCTCCAGCTCTGCCGCCCTGCTGTGGAGCTCCGAGGCATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp CATGGCGGTGATGCCTTTGTGACAGCCGCTGAGAGTTaGCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCC +
Preference number: 3 (lower is better)
Translates to: HGGDAFVTAAES*PEGSSRGLEES
Trigger: GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTCAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECQAGAE*VRGFLC
Trigger: GCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTG...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 3 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp AGCCGGGCCAGGAGTTCCTGGCGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGCCAAAGGTGGTGGCGG +
Preference number: 3 (lower is better)
Translates to: SRARSSWRPQKV*MTSELCQRWWR
Trigger: CCGCCACCACCTTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACGCCAGGAACTCCTGGCCCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp CCTCGACCAGCTGTCTGTGGGCAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCCGGGCCAAGTAGTATC +
Preference number: 3 (lower is better)
Translates to: PRPAVCGQWPGG*SHPRAAGPSSI
Trigger: GATACTACTTGGCCCGGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp GGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGACCACCTCGACCAGCTG +
Preference number: 3 (lower is better)
Translates to: GQDAMPLGSLGS*QVALTDHLDQL
Trigger: CAGCTGGTCGAGGTGGTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp GACGTCCCCAGCAGCCGCAGGACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTG +
Preference number: 3 (lower is better)
Translates to: DVPSSRRTVTVL*PSSLGICSASL
Trigger: CAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTGGGGACGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp TGCTCCTGGGTGATGAGCCCCAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACAGAAGTTAAGGTGGCC +
Preference number: 3 (lower is better)
Translates to: CSWVMSPSLRAS*APERRTEVKVA
Trigger: GGCCACCTTAACTTCTGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCTGGGGCTCATCACCCAGGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CCA 72 bp GTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCTATGAGCATCGCTGAG +
Preference number: 3 (lower is better)
Translates to: VGHCGEAGAVQK*CRHPGPMSIAE
Trigger: CTCAGCGATGCTCATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR-3UTR CAA 90 bp CAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: QPLRVARRGPPGGWRNPPICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...CGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 3 (lower is better)
Translates to: QPLRVARRGPPGGWRNPPSASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...CGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp CTTCCTCTGCGGTGGTGGCCAGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCA +
Preference number: 3 (lower is better)
Translates to: LPLRWWPAGQAR*KRPISGLPQTP
Trigger: TGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp GGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATGAGCATCGCTGAGATC +
Preference number: 3 (lower is better)
Translates to: GHCGEAGAVQKW*RHPGPMSIAEI
Trigger: GATCTCAGCGATGCTCATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR GCA 72 bp CACAGCAGGGCATCCTCAGACCCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCCACACAGGCAACTCGG +
Preference number: 3 (lower is better)
Translates to: HSRASSDPLTTS*SLWLTSTQATR
Trigger: CCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 3 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp GGGCCAGGAGTTCCTGGCGTCCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAAGGTGGTGGCGGATCT +
Preference number: 3 (lower is better)
Translates to: GPGVPGVRRRSE*PPSSAKGGGGS
Trigger: AGATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACGCCAGGAACTCCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp TTCCGGGCCTCGGGAGGGGGAATGCATATCACGTCCTaGCTGGAATTCAGGGGGAACACAAGGACGACCCCC +
Preference number: 3 (lower is better)
Translates to: FRASGGGMHITS*LEFRGNTRTTP
Trigger: GGGGGTCGTCCTTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGGCCCGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CCAGCTCCTTCAGGTAGCAGGCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGCTCCACGGCAGGCGGT +
Preference number: 3 (lower is better)
Translates to: PAPSGSRRESCS*GSPSRGSTAGG
Trigger: ACCGCCTGCCGTGGAGCCGCGACTTGGTGAACCCCAAGAACAAGACTCACGCCTGCTACCTGAAGGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTTGCACATCAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: PQDGHCLVPQQP*HLLSQLAHQGC
Trigger: ACAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: RPGRHASWLSRILTGSAHRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 3 (lower is better)
Translates to: HVGHEELPVCLLQAGAELSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...CAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCTTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVLTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp ACTCCTGTCCGGCCGTATCCAGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCCTCACCACAAACTGCT +
Preference number: 3 (lower is better)
Translates to: TPVRPYPAHGGV*GPGDWPSPQTA
Trigger: AGCAGTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGACAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp GCTTCACGGACCAGGCCAACCTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAGTCATCCAGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: ASRTRPTSGESR*GAHRSKSSSRS
Trigger: AGACCTGCTGGATGACTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGAGGTTGGCCTGGTCCGTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp GGAAGTAGACGTAGCTTCCATTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCC +
Preference number: 3 (lower is better)
Translates to: GSRRSFHCGTLR*GRCGPEMVQAP
Trigger: GGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGCTACGTCTACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR TCA 72 bp CCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGGGAGGGGGAATGCATA +
Preference number: 3 (lower is better)
Translates to: PGGPRTCSGTCS*LLSGPREGECI
Trigger: TATGCATTCCCCCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CCTCCTGGGCTCCAGAGCGTAGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGGCCTCCCCAGTACCTG +
Preference number: 3 (lower is better)
Translates to: PPGLQSVGQKLR*PPLVHRPPQYL
Trigger: CAGGTACTGGGGAGGCCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCCTACGCTCTGGAGCCCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CCA 72 bp TCCCTGAGAAGAAGTCGGCCAGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACAGGTAGCGCTCACGGA +
Preference number: 3 (lower is better)
Translates to: SLRRSRPGRHAS*LSRILTGSAHG
Trigger: TCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGACTTCTTCTCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp ACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATGCACATCCAAGGATCA +
Preference number: 3 (lower is better)
Translates to: TTPSLDTVSSVA*EASTAMHIQGS
Trigger: TGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: RPGRHASWLSRILTGSAHPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 3 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 3 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp ACCCCCGACACGAGGCCCGTAAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACACCTGATCTCACTGGAG +
Preference number: 3 (lower is better)
Translates to: TPDTRPVNRSLR*SATSRHLISLE
Trigger: CTCCAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGTGTCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR GCA 72 bp GCGGTCCTCGCACTTGCTCAGGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGGGGGAATGCATATCAC +
Preference number: 3 (lower is better)
Translates to: AVLALAQGHAVD*FPGLGRGNAYH
Trigger: GTGATATGCATTCCCCCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAGCAAGTGCGAGGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp GGGTGCCGTGTAGCTCATCTCGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACACAGCAGGGCATCCTC +
Preference number: 3 (lower is better)
Translates to: GCRVAHLEFPLA*LQVPETQQGIL
Trigger: GAGGATGCCCTGCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGATGAGCTACACGGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646016.2
3UTR CCA 72 bp AGGCCTCCCCAGTACCTGGTGCCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGTCCCTCTGGAAGTATC +
Preference number: 3 (lower is better)
Translates to: RPPQYLVPAGRR*EETHSRPSGSI
Trigger: GATACTTCCAGAGGGACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CCA 72 bp CCCACAAGTGGCAGAGTGATGAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAGAAGTCGGCCAGGACG +
Preference number: 3 (lower is better)
Translates to: PTSGRVMSFLVP*LQVPEKKSART
Trigger: CGTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCTCATCACTCTGCCACTTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: SIVGHCGEAGAVQKWCRHPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...GTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TGTGGCCTGGGAGGCCAGCACGGCCATGCACATCCAAGGATCAGAGGCATCTCCATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: CGLGGQHGHAHPRIRGISICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...GGAGATGCCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: RTSSSRDKTSFSSASERPDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: QQPQDGHCLVPQQPWHLLLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...GAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GGTCTTCAATGCCCCCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: GLQCPQRCPGRKSSSCCPSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...TGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: HDAILGANHQQLLLHTPCDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp CAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGGGGCCACCTTTCGGTC +
Preference number: 3 (lower is better)
Translates to: QLLQLPQVCNRM*EPQRLRGHLSV
Trigger: GACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp ACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATCAGGGCTGTCTTTCCA +
Preference number: 3 (lower is better)
Translates to: TVTVLCPSSLGI*SASLHIRAVFP
Trigger: TGGAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp TCCTTGCTGGGCGGGGTCCAATCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGGGACAAAACATCCTTC +
Preference number: 3 (lower is better)
Translates to: SLLGGVQSRYTS*RTSSSRDKTSF
Trigger: GAAGGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGACCCCGCCCAGCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp TTTGGGGAAGTAGACGTAGCTTCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: FGEVDVASIVGH*GEAGAVQKWCR
Trigger: CCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGCTACGTCTACTTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR CCA 72 bp CCTCTGGAAGTATCGTGCCACCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTCCCTCAATACCTCCCA +
Preference number: 3 (lower is better)
Translates to: PLEVSCHQLQVT*PGSQMVPQYLP
Trigger: TGGGAGGTATTGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CCA 72 bp CTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCA +
Preference number: 3 (lower is better)
Translates to: LQETVWRRVWKN*TTLVWASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp TGCTCTTCCATGTCCCACACAGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGCTTCTCCTCCACACCC +
Preference number: 3 (lower is better)
Translates to: CSSMSHTAMMPS*VPITSSFSSTP
Trigger: GGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATGGCTGTGTGGGACATGGAAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp TGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCTGAGTGTAAAAGGTGT +
Preference number: 3 (lower is better)
Translates to: CRPRGSPSEWPR*RGSRAAECKRC
Trigger: ACACCTTTTACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CGCCAAGAATATCCGCACCGATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: RQEYPHRSSKACGEEGLIPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...GATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATCGGTGCGGATATTCTTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: VCSRRVQSWCVASSAVVAKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: DVVIGDGQAVLALAQGHASSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGGACAGCAGTAGGGTCTaGTTCAGCTCAAAAGCCTCT +
Preference number: 3 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGDSSRV*FSSKAS
Trigger: AGAGGCTTTTGAGCTGAACAAGACCCTACTGCTGTC...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACCAGCTCCAGGTCACTaGGCCTGGCAGTCAGATGGT +
Preference number: 3 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSPAPGH*AWQSDG
Trigger: ACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR-3UTR CAA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 3 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCATCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 3 (lower is better)
Translates to: DVVIGDGQAVLALAQGHASASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 3 (lower is better)
Translates to: LPKPAARRDSSSETTRNLSASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...GAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp GGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTaGTTCTGGGCTACAGTCAGGCTGCTCATACCCACC +
Preference number: 3 (lower is better)
Translates to: GSTDSSGLVWPW*FWATVRLLIPT
Trigger: GGTGGGTATGAGCAGCCTGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR GCA 72 bp CAAAGTCATCCAGCAGGTCTTCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: QSHPAGLQCPQR*PGRKSSSCCPE
Trigger: TTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGGATGACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CCAGTGCTGGATGTGAGGTGGCGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACAGGAGGCTCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: PVLDVRWRRNGV*PAVLCTGGSSP
Trigger: TGGAGAGGAGCCTCCTGTACACAGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTCACATCCAGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp TGTCCCACCAGTGCTGGATGTGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCTGTGTACAGGAGGCTC +
Preference number: 3 (lower is better)
Translates to: CPTSAGCEVAKK*SLASSSVYRRL
Trigger: GAGCCTCCTGTACACAGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTCACATCCAGCACTGGTGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp TTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACAC +
Preference number: 3 (lower is better)
Translates to: LWLTSTQATRLL*VSKGNALEVAH
Trigger: GTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TTCAGCAGGCCACGGGCATCTGAGCTCATTTGTGACGTCCCCAGCAGCCGCAGGATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: FSRPRASELICDVPSSRRIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...CCTGCGGCTGCTGGGGACGTCACAAATGAGCTCAGATGCCCGTGGCCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 3 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TTTGAGGCTGCTGAGAAGGTTCTGGGCATCAGCGTCCAGGCAGCCATCCGCGAGGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: FEAAEKVLGISVQAAIREVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...CTCGCGGATGGCTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAGCCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 3 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp ACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACATCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 3 (lower is better)
Translates to: TGNSAPVGLQGKRFGSCTSFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...TGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 3 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWSNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp CCTATGAGCATCGCTGAGATCCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGATGCCACCAAAGCCCC +
Preference number: 3 (lower is better)
Translates to: PMSIAEIPDLER*GLWGSRCHQSP
Trigger: GGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGATGCTCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR GCA 72 bp AGAACTCGTGTAGCTCATCTCGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACACAGCAGGGCATCCTC +
Preference number: 3 (lower is better)
Translates to: RTRVAHLEFPLA*LQVPETQQGIL
Trigger: GAGGATGCCCTGCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGATGAGCTACACGAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR CCA 72 bp GTTGGCATAGCTGTCCCACCAGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGGCCAGCAGTTCTGTGT +
Preference number: 3 (lower is better)
Translates to: VGIAVPPVLDVR*RRNGVWPAVLC
Trigger: ACACAGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTCACATCCAGCACTGGTGGGACAGCTATGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CCAGGCACACCTGGAAGCAGATGCTCTTCAGCAGGCCACGGGCATCTGAGCTCAATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: PGTPGSRCSSAGHGHLSSIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...TGAGCTCAGATGCCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 3 (lower is better)
Translates to: CLLQAGAELVRGFLCGGGLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...GCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: DVVIGDGQAVLALAQGHAVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 3 (lower is better)
Translates to: DVVIGDGQAVLALAQGHADAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp ACCACCAGCTGCTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 3 (lower is better)
Translates to: TTSCSLWLTSTQATRLLWETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GCTGCGGGGCCACCTTTCGGTCCAAGTTCAGTGGTTTCCCCACAAGTGGCAGAGAAGAAATGCAGACTGTaGCATTTTTGCCAACAGGGG +
Preference number: 3 (lower is better)
Translates to: AAGPPFGPSSVVSPQVAEKKCRL*HFCQQG
Trigger: CCCCTGTTGGCAAAAATGCAACAGTCTGCATTTCTT...CTCTGCCACTTGTGGGGAAACCACTGAACTTGGACCGAAAGGTGGCCCCGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR TCA 72 bp GGACATATGTTGCTTCCCCTGAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCACACCATCCCTGGACAC +
Preference number: 3 (lower is better)
Translates to: GHMLLPLKFSRS*APQTDHTIPGH
Trigger: GTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTTCAGGGGAAGCAACATATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp ATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCAGGGAATCTTGTTCCT +
Preference number: 3 (lower is better)
Translates to: IGACAAQQPPDT*SHWRCPGNLVP
Trigger: AGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
3UTR GCA 72 bp AGTCAGGCTGCTCATACCCACCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: SQAAHTHPRHNL*LPHVQSLSLPA
Trigger: AGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGGGTGGGTATGAGCAGCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 72 bp TCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGA +
Preference number: 3 (lower is better)
Translates to: SKFLQETVWRRV*KNWTTLVWASR
Trigger: TCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CACCTTTCGGTCCAAGTTCAGTGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTTGGTACCCTGGCTCCA +
Preference number: 3 (lower is better)
Translates to: HLSVQVQWFPHK*QSDELLGTLAP
Trigger: TGGAGCCAGGGTACCAAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCACTGAACTTGGACCGAAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATaGACAAACTGGACTGTCAGCAGGGTGCCATCCAGC +
Preference number: 3 (lower is better)
Translates to: PLVVGMILFTTA*TNWTVSRVPSS
Trigger: GCTGGATGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR CCA 72 bp CCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATaGACAAACTGGACTGTCAGCAGGGTGCCGTGTAGC +
Preference number: 3 (lower is better)
Translates to: PLVVGMILFTTA*TNWTVSRVPCS
Trigger: GCTACACGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646016.2
3UTR-3UTR CAA 90 bp TGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTCTGAGCTCAGCATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: WISLRKTVAPCSRSSELSIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...GCTGAGCTCAGAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 3 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: STSVICCISHSSVPPSSGRTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATAAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 3 (lower is better)
Translates to: CFWTETAQVGVSSLMLDIRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp TCTCCACCATGTCTTCATGTTCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCGAGTCCGCCAAGAATA +
Preference number: 3 (lower is better)
Translates to: SPPCLHVPDPWP*IGESPSSPPRI
Trigger: TATTCTTGGCGGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp ACCTCTCCTGTGTGTCCAGTTAGCATGTGGATCACATaGTGCTCTTCCATGTCCCACACAGCCATGATGCCA +
Preference number: 3 (lower is better)
Translates to: TSPVCPVSMWIT*CSSMSHTAMMP
Trigger: TGGCATCATGGCTGTGTGGGACATGGAAGAGCAGCATGTGATCCACATGCTAACTGGACACACAGGAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp ACCATGCCTGGTGGGGGCAATGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCACAGCATGGACAAACTG +
Preference number: 3 (lower is better)
Translates to: TMPGGGNEATGG*DDSVYHSMDKL
Trigger: CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR CCA 72 bp CTCATCTTCAGAGACCACCAGGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGA +
Preference number: 3 (lower is better)
Translates to: LIFRDHQEPHSI*KLLQQSVPFGG
Trigger: TCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTCCTGGTGGTCTCTGAAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTaGAAGTTGCACACTCGTAAAGAAAGAGGTCCCCAT +
Preference number: 3 (lower is better)
Translates to: QLGSCGSPRETL*KLHTRKERGPH
Trigger: ATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 3 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCATACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 3 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCTTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: VGLQGKRFGSCTLVKKEVLTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...GACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELLTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTGCAACCGTATGTGAGAACCACAGAGGCTGCGGGGCCACCTTTCGGTCCAAGTTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 3 (lower is better)
Translates to: LQPYVRTTEAAGPPFGPSSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...ACTTGGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 3 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCAGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 3 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTCCGAGGGACCAGAGGTaGACTGGTTTGGCATTTGCA +
Preference number: 3 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSPRDQR*TGLAFA
Trigger: TGCAAATGCCAAACCAGTCAACCTCTGGTCCCTCGG...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR CAA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 3 (lower is better)
Translates to: RTSSSRDKTSFSSASERPLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 3 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 3 (lower is better)
Translates to: STSVICCISHSSVPPSSGLRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR GCA 72 bp GCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAGGTCCCCATTGGTCAT +
Preference number: 3 (lower is better)
Translates to: APVGLQGKRFGS*TLVKKEVPIGH
Trigger: ATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp ACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTAAGGAAGACGGTGGCT +
Preference number: 3 (lower is better)
Translates to: TILRAQSSRMCL*RSWISLRKTVA
Trigger: AGCCACCGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp TGGAAGTTGCACACTCGTAAAGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAA +
Preference number: 3 (lower is better)
Translates to: WKLHTRKERGPH*SCCRPRGSPSE
Trigger: TTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp GTTGGGATGATTCTGTTTACCACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCATCCAGCACACTCCAA +
Preference number: 3 (lower is better)
Translates to: VGMILFTTAWTN*TVSRVPSSTLQ
Trigger: TTGGAGTGTGCTGGATGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR CCA 72 bp GTTGGGATGATTCTGTTTACCACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCGTGTAGCTCATCTCGA +
Preference number: 3 (lower is better)
Translates to: VGMILFTTAWTN*TVSRVPCSSSR
Trigger: TCGAGATGAGCTACACGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646016.2
3UTR-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 3 (lower is better)
Translates to: GDRATPSASAGLQPYVRTYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: SGFLALLITTGSTDSSGLLTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIRTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR GCA 72 bp ATGGAGCCATTGCTAAACCCGGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCACAGGTAGGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: MEPLLNPVTSFP*FWTETAQVGVS
Trigger: AGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGCAATGGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp ACAGCCTTTCTCAGAGCCGAGGGACCAGAGGTTGACTaGTTTGGCATTTGCAAGAAATGCAGACTGTTGCAT +
Preference number: 3 (lower is better)
Translates to: TAFLRAEGPEVD*FGICKKCRLLH
Trigger: ATGCAACAGTCTGCATTTCTTGCAAATGCCAAACCAGTCAACCTCTGGTCCCTCGGCTCTGAGAAAGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR CAA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp GTTTCTTCTTTGATGCTGGACATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAGCTCCACAGACTGACC +
Preference number: 3 (lower is better)
Translates to: VSSLMLDICCFP*SFPVAELHRLT
Trigger: GGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTTCAGGGGAAGCAACATATGTCCAGCATCAAAGAAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp GCTAAACCCGGTAACAAGCTTTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGTTTCTTCTTTGATGCT +
Preference number: 3 (lower is better)
Translates to: AKPGNKLSLLLD*DGTGRCFFFDA
Trigger: AGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR TCA 72 bp AATTACCCAGCCTCAAGTATGCCTTTATTAGTGGCATaGGAACAGACTAATACGGCCCCTGTGCCAGGAACC +
Preference number: 3 (lower is better)
Translates to: NYPASSMPLLVA*EQTNTAPVPGT
Trigger: GGTTCCTGGCACAGGGGCCGTATTAGTCTGTTCTCATGCCACTAATAAAGGCATACTTGAGGCTGGGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR GCA 72 bp TCCGTTCCCCCTTCATCTGGTACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCTTCTATTCTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: SVPPSSGTRTPV*ISGVISSILSP
Trigger: GGGACTGAGAATAGAAGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR GCA 72 bp TGTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTaGAGTAAGAACTCGTGTAGCTCATCTCGAATTTCC +
Preference number: 3 (lower is better)
Translates to: CHPWRSKHIGPL*SKNSCSSSRIS
Trigger: GGAAATTCGAGATGAGCTACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR CCA 72 bp TCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAAATATTTTCACACACC +
Preference number: 3 (lower is better)
Translates to: STSAACNPLKQS*RGSLWQIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp CCATTGCTAAACCCGGTAACAAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: PLLNPVTSFPCF*TETAQVGVSSL
Trigger: CAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CCA 72 bp GATCCTTTAAGCCCACGTACACATACTTGTCATCCTTaGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAG +
Preference number: 3 (lower is better)
Translates to: DPLSPRTHTCHP*RSKHIGPLCSK
Trigger: CTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGACAAGTATGTGTACGTGGGCTTAAAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR-3UTR CAA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 3 (lower is better)
Translates to: STQATRLLWVSKGNALEVLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 3 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 3 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 3 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 3 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGCATTGGGTAAGCCCTaGATTCACAGAGAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLALGKP*IHREAV
Trigger: CACTGCTTCTCTGTGAATCAAGGGCTTACCCAATGC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCAGAGGTTGACTGGTTaGGCATTTGCAAGAAATGCA +
Preference number: 3 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGQRLTG*AFARNA
Trigger: TGCATTTCTTGCAAATGCCAAACCAGTCAACCTCTG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR CAA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATAATCCTGAGACCAAGATaGATCAGGAACATGGCTGAA +
Preference number: 3 (lower is better)
Translates to: CFWTETAQVGVSSLMLDIILRPR*IRNMAE
Trigger: TTCAGCCATGTTCCTGATCAATCTTGGTCTCAGGAT...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR CCA 72 bp CCGATTAGAGCTCTGCATTCTCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATGGGCCAATTGGGACCA +
Preference number: 3 (lower is better)
Translates to: PIRALHSPRYNN*FRARRMGQLGP
Trigger: TGGTCCCAATTGGCCCATACGCCTAGCCCTAAACCAATTATTATATCTGGGAGAATGCAGAGCTCTAATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 72 bp CATCTCAGGAGTAATCTCTTCTATTCTCAGTCCCAGTaGTGGACATTGGATCAGTCTAGCCGATTAGAGCTC +
Preference number: 3 (lower is better)
Translates to: HLRSNLFYSQSQ*WTLDQSSRLEL
Trigger: GAGCTCTAATCGGCTAGACTGATCCAATGTCCACCACTGGGACTGAGAATAGAAGAGATTACTCCTGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CCA 72 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTaGCAAATATTTTCACACACCTCACCTCTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: CNPLKQSWRGSL*QIFSHTSPLLC
Trigger: ACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: AFIETLSGIPRRGEGIATKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 3 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 3 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCAGACTGTTGCATTTTaGCCAACAGGGGATGGATAT +
Preference number: 3 (lower is better)
Translates to: STSVICCISHSSVPPSSGQTVAF*PTGDGY
Trigger: ATATCCATCCCCTGTTGGCAAAAATGCAACAGTCTG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGTAAGATGTGCCTCTTaGCTTCTCCTTTGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: LAPWTCDLNQIITTSARLVRCAS*LLLCLQ
Trigger: CTGAAGGCAAAGGAGAAGCAAAGAGGCACATCTTAC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR CCA 72 bp AGACCAAGATTGATCAGGAACATGGCTGAACTATCTTaGATCAGTAAAACAGCCTTTCTCAGAGCCGAGGGA +
Preference number: 3 (lower is better)
Translates to: RPRLIRNMAELS*ISKTAFLRAEG
Trigger: TCCCTCGGCTCTGAGAAAGGCTGTTTTACTGATCCAAGATAGTTCAGCCATGTTCCTGATCAATCTTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: LAPWTCDLNQIITTSARLIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 3 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 3 (lower is better)
Translates to: LAPWTCDLNQIITTSARLYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 3 (lower is better)
Translates to: STSVICCISHSSVPPSSGVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR GCA 72 bp ATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTaGTGTATCTCACATTCATCCGTTCCCCCTTCATCT +
Preference number: 3 (lower is better)
Translates to: INCEVLWSTSVI*CISHSSVPPSS
Trigger: AGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 3 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: STSVICCISHSSVPPSSGKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: ENSLTVELAQGRQFKSKALRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 3 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 3 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLSGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQELRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 3 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 3 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYISGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCTAAGGTTGCTTTTATaGAGACTCTATCAGGAATTC +
Preference number: 3 (lower is better)
Translates to: STSVICCISHSSVPPSSGLRLLL*RLYQEF
Trigger: GAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR TCA 72 bp GGAAAGAATAATGGAAAGATGAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCATGGGTCCAGATATAC +
Preference number: 3 (lower is better)
Translates to: GKNNGKMRRDKV*SHNLKPWVQIY
Trigger: GTATATCTGGACCCATGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 3 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR-3UTR CAA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 3 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR GCA 72 bp TGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTaGTGCCCAATACATCCAAGCATACATCTTAAAATT +
Preference number: 3 (lower is better)
Translates to: CTNLSNLQHLRS*CPIHPSIHLKI
Trigger: AATTTTAAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: VGKQMPPKPRRGPAGSRGCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...CCCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGATCTTGGCCCATCGATaGCCGGGCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GPRGAARVSAPGGCRVGAILAHR*PGRGPR
Trigger: CCGGGGACCCCTGCCCGGTCATCGATGGGCCAAGAT...CGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: QPLRVARRGPPGGWRNPPSLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...CGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: CGEADATKAPPRASRLTGVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...CCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTLFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GPRGAARVSAPGGCRVGACGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...CGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGCCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: AAESCPEGSSRGLEESSEPLTTS*SLWLTS
Trigger: GGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGG...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGTGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HVGHEELPVCLLQAGAELWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...CAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGCTGCTCCTTGTGGCTaGCCTCCACACAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: CGEADATKAPPRASRLTGAAPCG*PPHRQL
Trigger: GAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGC...CCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTGACAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: VTAAESCPEGSSRGLEESGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTGGGCAATGGCCAGGAGGGTGAAGCCATCCACGGGCCGCCGGGCCAAGTAGTAGCAGGGCGGCAGAGCTaGAGGGCTTCACGGACCAGG +
Preference number: 4 (lower is better)
Translates to: VGNGQEGEAIHGPPGQVVAGRQS*RASRTR
Trigger: CCTGGTCCGTGAAGCCCTCCAGCTCTGCCGCCCTGC...TACTACTTGGCCCGGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 72 bp CGCACCCACAGCAGGGGCGGGAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCTCGGTACACATCCTGC +
Preference number: 4 (lower is better)
Translates to: RTHSRGGKRSSS*LGGVQSRYTSC
Trigger: GCAGGATGTGTACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTTCCCGCCCCTGCTGTGGGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGACTCCACACCTGAATaGGCGCATCAAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: DCGEADATKAPPRASRLTDSTPE*AHQGTP
Trigger: CGGGGTCCCTTGATGCGCTCATTCAGGTGTGGAGTC...CGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp GGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGCATCCTCAGACCCGCTaGCCACCAGCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GPRGAARVSAPGGCRVGAHPQTR*PPAAPC
Trigger: ACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATG...CGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTCCCTGCGGCCTCACCTaGCCGGTGGTAGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECPCGLT*PVVVLP
Trigger: TGGCAGCACTACCACCGGTCAGGTGAGGCCGCAGGG...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR GCA 90 bp GTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: VGKQMPPKPRRGPAGSRGGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...CCCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCAC
67% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTGACAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: VTAAESCPEGSSRGLEESGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGATCCGTGAGCCTGGTTaGAATGCCGGCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: AAESCPEGSSRGLEESSEIREPG*NAGSSI
Trigger: GATGGAGGAGCCGGCATTCCAACCAGGCTCACGGAT...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CCAGCACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGATCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PARGPRGAARVSAPGGCRSGTCS*LLSGPR
Trigger: CCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGA...TCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGCCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: AAESCPEGSSRGLEESSEPLEVS*HQLQVT
Trigger: AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCTGGGCCACGAGGAGCTaGCCGTGTGTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQPQDGHCLVPQQPWHLLWATRS*PCVCSR
Trigger: CCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCA...GAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: VCSRRVQSWCVASSAVVAQCPQR*PGRKSS
Trigger: GCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTG...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: VGKQMPPKPRRGPAGSRGEFPLA*LQVPET
Trigger: TGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTC...CCCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VCSRRVQSWCVASSAVVASTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VGKQMPPKPRRGPAGSRGPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...CCCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp TGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGATTCACTTCAGCGCCTaGCCACGCTCCCTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: CGEADATKAPPRASRLTGIHFSA*PRSLGY
Trigger: GTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAAT...CCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR CAA 72 bp TGTGACGTCCCCAGCAGCCGCAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: CDVPSSRRTVTV*CPSSLGICSAS
Trigger: GCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTGGGGACGTCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CCAGCACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGACGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PARGPRGAARVSAPGGCRRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...TCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACTGCTGTCATCGTGCCTaGGCTGCTGCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHCCHRA*AAAQAG
Trigger: CCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCA...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACATGCTGTCATCGTGCCTaGGCTGCTGCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTCCHRA*AAAQAG
Trigger: CCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCA...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CAAGTAGTATCCCAGATCCCGACGAAGCCGCACCCACAGCAGGGGCGGGAAGCGTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: QVVSQIPTKPHPQQGREACPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...CGCTTCCCGCCCCTGCTGTGGGTGCGGCTTCGTCGGGATCTGGGATACTACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACCTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RPGRHASWLSRILTGSAHLCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCACCCATGCCATGGCGGTaGTGCCTTTGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPAPMPWR*CLCDSR
Trigger: GCGGCTGTCACAAAGGCATCACCGCCATGGCATGGG...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AAESCPEGSSRGLEESSEPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTCAGCAGGCCACGGGCATCTGAGCTCATTTGTGACGTCCCCAGCAGCCGCAGGAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 4 (lower is better)
Translates to: FSRPRASELICDVPSSRRRGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...CCTGCGGCTGCTGGGGACGTCACAAATGAGCTCAGATGCCCGTGGCCTGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGATCTTGGCCCATCGATaGCCGGGCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TLKDEDCGEADATKAPPRILAHR*PGRGPR
Trigger: CCGGGGACCCCTGCCCGGTCATCGATGGGCCAAGAT...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCTGAGAAGGTTCTGGGCATCAGCGTCCAGGCAGCCATCCGCGAGATCTTGGCCCATCGATaGCCGGGCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: FEAAEKVLGISVQAAIREILAHR*PGRGPR
Trigger: CCGGGGACCCCTGCCCGGTCATCGATGGGCCAAGAT...CTCGCGGATGGCTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAGCCTCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTATCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VCSRRVQSWCVASSAVVAALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: HVGHEELPVCLLQAGAELTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...CAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECSCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: IVGHCGEAGAVQKWCRHPSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...CGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTGAGAACCACAGAGGCTaGGGGGCCACCTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECENHRG*GATFRS
Trigger: GGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTC...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TCCGGCCGTATCCAGCTCACGGAGGCGTGTGAGGACCTGGTGATTGGCCCTCACGAGAACCACAGAGGCTaGGGGGCCACCTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SGRIQLTEACEDLVIGPHENHRG*GATFRS
Trigger: GGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTC...GTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCCCAGCAGGTCTTCAATaGCCCCAGAGATGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVPAGLQ*PQRCPG
Trigger: GCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGG...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGCTGTGGGGAAGCAGATaGCACCAAAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALLWGSR*HQSPAA
Trigger: CGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAG...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCATCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPASIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp GTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGCACATTGGACCCCTCTaGAGTAAGAACTCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: VGKQMPPKPRRGPAGSRGHIGPL*SKNSCS
Trigger: GCTACACGAGTTCTTACTGCAGAGGGGTCCAATGTG...CCCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CCA 90 bp GTGACAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCGGTCTTGAGGACCCCTaGGTGCATGTCAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: VTAAESCPEGSSRGLEESGLEDP*VHVSDV
Trigger: CACATCACTGACATGCACCCAGGGGTCCTCAAGACC...GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCAGGCACACCTGGAAGCAGATGCTCTTCAGCAGGCCACGGGCATCTGAGCTCACTTCCTCTGCGGTGGTaGCCAGCGGGACAGGCACGG +
Preference number: 4 (lower is better)
Translates to: PGTPGSRCSSAGHGHLSSLPLRW*PAGQAR
Trigger: CCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAG...TGAGCTCAGATGCCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQAWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: VCSRRVQSWCVASSAVVAGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGCTGAGGCCCCAGTTCTaGGTCCCAGCATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMLRPQF*VPASLQ
Trigger: CTGGAGAGATGCTGGGACCCAGAACTGGGGCCTCAG...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR CAA 72 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTaGTGGCTGACCTCCACACAGGCAACTCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RASSDPLTTSCS*WLTSTQATRLL
Trigger: CAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CTCATCGATCCGCGAGGGAATCAGACAGGGGCCGTACTGATCACCGATGAGGGCGCAGGCGGTGGGTCTTaGGGACCCCTGGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: LIDPRGNQTGAVLITDEGAGGGS*GPLGAC
Trigger: ACATGCACCCAGGGGTCCTCAAGACCCACCGCCTGC...GCCCTCATCGGTGATCAGTACGGCCCCTGTCTGATTCCCTCGCGGATCGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR TCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACCGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RPGRHASWLSRILTGSAHRPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGCAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQQWPGG*SHPRAA
Trigger: GGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTG...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACACTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTLAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VCSRRVQSWCVASSAVVAVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTATGTCCCACACAGCCATaGTGCCATCCTGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLCPTQP*CHPGCQ
Trigger: TTGGCACCCAGGATGGCATCATGGCTGTGTGGGACA...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CCAGCACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGACCTGACTCAGCCTCCTaGGTAACTGAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: PARGPRGAARVSAPGGCRPDSAS*VTEITG
Trigger: GCCTGTAATCTCAGTTACTCAGGAGGCTGAGTCAGG...TCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGCTCCCCAGTACCTGGTaGCTGCAGGACGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALLPSTW*LQDVGG
Trigger: CCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAG...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTTGAGGCTGCTGAGAAGGTTCTGGGCATCAGCGTCCAGGCAGCCATCCGCGAGTCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: FEAAEKVLGISVQAAIRESCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...CTCGCGGATGGCTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAGCCTCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGTCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLKDEDCGEADATKAPPRSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTAVQKW*RHPGPM
Trigger: CATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGC...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGCCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VCSRRVQSWCVASSAVVAAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGGAGGGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCACTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRVWKNWTTLVWASRTWALHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QQPQDGHCLVPQQPWHLLVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...GAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCATGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: DVVIGDGQAVLALAQGHAWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCGGCCGTATCCAGCTCACGGAGGCGTGTGAGGACCTGGTGATTGGCCCTCACTGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGRIQLTEACEDLVIGPHCRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...GTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTACAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMGSPSE*PRWRGS
Trigger: AGACCCTCTCCAGCGTGGCCATTCTGACGGACTACC...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: LPKPAARRDSSSETTRNLAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...GAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGCAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRQWPGG*SHPRAA
Trigger: GGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTG...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GMEKLDHPGVGVQNLGRGSGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...CCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGCCCATGCCATGGCGGTaGTGCCTTTGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGPMPWR*CLCDSR
Trigger: GCGGCTGTCACAAAGGCATCACCGCCATGGCATGGG...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACAGACTCCACACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRDRLHT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTGTGGAGTCTGTC...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: AAESCPEGSSRGLEESSEALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGACAGGGGCCGTACTaGTCACCGATGAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWRQGPY*SPMRAW
Trigger: CCAGGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438489.6
CDS-3UTR GCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGTCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQASARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQAQCPQR*PGRKSS
Trigger: GCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTG...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TLKDEDCGEADATKAPPRGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGTCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGCACATTGGACCCCTCTaGAGTAAGAACTCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTHIGPL*SKNSCS
Trigger: GCTACACGAGTTCTTACTGCAGAGGGGTCCAATGTG...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR GCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACACTAATACGGCCCCTGTaGCAGGAACCTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTLIRPL*QEPPWE
Trigger: CTCCCAGGGAGGTTCCTGGCACAGGGGCCGTATTAG...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACCCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RPGRHASWLSRILTGSAHPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCCCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QQPQDGHCLVPQQPWHLLPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...GAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGGCTGGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: SCAPAALASAQPACTSGLGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...CAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWCCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGAAAACTGGACCACCCTaGTGTGGGCGTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: PSMTGQGSPEVMSSTRTMKTGPP*CGRPEP
Trigger: AGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTT...CATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTGACAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VTAAESCPEGSSRGLEESSWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GPRGAARVSAPGGCRVGASWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...CGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: RTSSSRDKTSFSSASERPRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAGCGGGACAGGCACGGTGAAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCAGTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QRDRHGERGPFPGFLKRQSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...CTGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: STQATRLLWVSKGNALEVGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: RTSSSRDKTSFSSASERPGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACTGTTGTCATAGGCGATaGCCAGGCGGTCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: RPGRHASWLSRILTGSAHCCHRR*PGGPRT
Trigger: AGTGCGAGGACCGCCTGGCCATCGCCTATGACAACA...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECTSCSL*LTSTQA
Trigger: TGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGT...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTGACAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VTAAESCPEGSSRGLEESRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGTGCCAGGAACCTCCCTaGGAGACAAGAAGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: HVGHEELPVCLLQAGAELCQEPP*ETRRKS
Trigger: GCTCTTTCTTCTTGTCTCCCAGGGAGGTTCCTGGCA...CAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR CAA 72 bp GACCTCCGAGCTCTGCCAAAGGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTCCTGTCCGGCCGTATC +
Preference number: 4 (lower is better)
Translates to: DLRALPKVVADL*VEPRQLLSGRI
Trigger: GATACGGCCGGACAGGAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCACCTTTGGCAGAGCTCGGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 72 bp GCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCGGGAGGGGGAATGCAT +
Preference number: 4 (lower is better)
Translates to: ARRSSHLLRDMQ*IAFRASGGGMH
Trigger: ATGCATTCCCCCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ACGAGGCCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: TRPVNRSLRCSATSRHLILFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...GATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ATCCGCGAGCCGGTCCACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTTGTGGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: IREPVHHPKGAVFKDVFVAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...CACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGTGGACCGGCTCGCGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CAGCGGGACAGGCACGGTGAAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCAGTGTCCCACACAGCCATaGTGCCATCCTGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QRDRHGERGPFPGFLKRQCPTQP*CHPGCQ
Trigger: TTGGCACCCAGGATGGCATCATGGCTGTGTGGGACA...CTGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AACATCCTTCAGCTCCGCCTCCGAGAGACCGTGTCGGGAAGACACAATGTAGCCTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NILQLRLRETVSGRHNVACGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...GGCTACATTGTGTCTTCCCGACACGGTCTCTCGGAGGCGGAGCTGAAGGATGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCACAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPAQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGACAGGGGCCGTACTaGTCACCGATGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QQPQDGHCLVPQQPWHLLRQGPY*SPMRAF
Trigger: AAAAGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...GAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646016.2
CDS-3UTR GCA 90 bp TCCGGCCGTATCCAGCTCACGGAGGCGTGTGAGGACCTGGTGATTGGCCCTCACGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: SGRIQLTEACEDLVIGPHGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...GTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATC +
Preference number: 4 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTSSLGI*SASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCT...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: SIVGHCGEAGAVQKWCRHTVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...GTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGTCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: RTSSSRDKTSFSSASERPSRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SIVGHCGEAGAVQKWCRHSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...GTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACAAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCTCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: HDAILGANHQQLLLHTPCSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRNRSLR*SATSRH
Trigger: GTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATT...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp GGTCTTCAATGCCCCCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCACCTCGGGAGGGGGAATaGATATCACGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLQCPQRCPGRKSSSCCPPREGE*ISRPAW
Trigger: CCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGG...TGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHGHAVD*FPGLGR
Trigger: CCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCC...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGCTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQALLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACGGTCTTGAGGACCCCTaGGTGCATGTCAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: RPGRHASWLSRILTGSAHGLEDP*VHVSDV
Trigger: CACATCACTGACATGCACCCAGGGGTCCTCAAGACC...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCTGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HDAILGANHQQLLLHTPCWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACAAAACTGGACCACCCTaGTGTGGGCGTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: RPGRHASWLSRILTGSAHKTGPP*CGRPEP
Trigger: AGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTT...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCGGCCGTATCCAGCTCACGGAGGCGTGTGAGGACCTGGTGATTGGCCCTCACAAAACTGGACCACCCTaGTGTGGGCGTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: SGRIQLTEACEDLVIGPHKTGPP*CGRPEP
Trigger: AGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTT...GTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACAGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCCACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: VGKQMPPKPRRGPAGSRGMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...CCCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGTGTTGTCATAGGCGATaGCCAGGCGGTCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQACCHRR*PGGPRT
Trigger: AGTGCGAGGACCGCCTGGCCATCGCCTATGACAACA...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGATCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGSEWPR*RGSRAA
Trigger: AGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGA...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGTGGCCTGGGAGGCCAGCACGGCCATGCACATCCAAGGATCAGAGGCATCTCCGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: CGLGGQHGHAHPRIRGISATRLL*VSKGNA
Trigger: AGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGC...GGAGATGCCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: SIVGHCGEAGAVQKWCRHATRLL*VSKGNA
Trigger: AGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGC...GTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTCTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRTAWTN*TVSRVP
Trigger: TGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CCA 90 bp TGTGCGCACAACTGGAACCAGCTCTGGGCCTGTTGGCATAGCTGTCCCACCAGTGCAGTGTCAGCGTTCTaGCTGTCCTGGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CAHNWNQLWACWHSCPTSAVSAF*LSWGLQ
Trigger: CTGGAGCCCCCAGGACAGCCAGAACGCTGACACTGC...ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp TTCAGCAGGCCACGGGCATCTGAGCTCATTTGTGACGTCCCCAGCAGCCGCAGGATCCGTGAGCCTGGTTaGAATGCCGGCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: FSRPRASELICDVPSSRRIREPG*NAGSSI
Trigger: GATGGAGGAGCCGGCATTCCAACCAGGCTCACGGAT...CCTGCGGCTGCTGGGGACGTCACAAATGAGCTCAGATGCCCGTGGCCTGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCACGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DVVIGDGQAVLALAQGHARPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TGTGCGCACAACTGGAACCAGCTCTGGGCCTGTTGGCATAGCTGTCCCACCAGTTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: CAHNWNQLWACWHSCPTSSGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ACCACCAGCTGCTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGCACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: TTSCSLWLTSTQATRLLWHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTTCTTGGGGTTCACCAAGTCGCGGCTCCACGGCAGGCGGTGGGTCTTGAGGACAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: VLGVHQVAAPRQAVGLEDKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...GTCCTCAAGACCCACCGCCTGCCGTGGAGCCGCGACTTGGTGAACCCCAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQPDPWP*IGESPS
Trigger: CGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGG...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTTGGGGAAGTAGACGTAGCTTCCATTGTGGGACACTGCGGTGAGGCCGGTGCGCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: FGEVDVASIVGHCGEAGAPDPWP*IGESPS
Trigger: CGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGG...CGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGCTACGTCTACTTCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp CAGCGGGACAGGCACGGTGAAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCAGGACAGACTCCACACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: QRDRHGERGPFPGFLKRQDRLHT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTGTGGAGTCTGTC...CTGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCTCACTGTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PVNRSLRCSATSRHLISLCGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...CAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCATCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DVVIGDGQAVLALAQGHASLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: DCGEADATKAPPRASRLTRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...CGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CCAGGCACACCTGGAAGCAGATGCTCTTCAGCAGGCCACGGGCATCTGAGCTCACTTCAGGGTAGGCAGTaGTCTGCAGGGCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGTPGSRCSSAGHGHLSSLQGRQ*SAGLPS
Trigger: AGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAG...TGAGCTCAGATGCCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCACCAGCTGCTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATC +
Preference number: 4 (lower is better)
Translates to: TTSCSLWLTSTQATRLLWSSLGI*SASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCT...CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCTGCGGGGCCACCTTTCGGTCCAAGTTCAGTGGTTTCCCCACAAGTGGCAGAGACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: AAGPPFGPSSVVSPQVAETVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...CTCTGCCACTTGTGGGGAAACCACTGAACTTGGACCGAAAGGTGGCCCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGGAGGGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCATCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: RRVWKNWTTLVWASRTWASRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ATCCGCGAGCCGGTCCACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTTGTGAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: IREPVHHPKGAVFKDVFVSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...CACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGTGGACCGGCTCGCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CCAGGCACACCTGGAAGCAGATGCTCTTCAGCAGGCCACGGGCATCTGAGCTCAAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGTPGSRCSSAGHGHLSSRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...TGAGCTCAGATGCCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCACTGTGGGGAAGCAGATaGCACCAAAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPLWGSR*HQSPAA
Trigger: CGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAG...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp TTCAGCAGGCCACGGGCATCTGAGCTCATTTGTGACGTCCCCAGCAGCCGCAGGAGGACAGAGGCCCTTTaGAGTGTCAGCGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FSRPRASELICDVPSSRRRTEAL*SVSVLA
Trigger: AGCCAGAACGCTGACACTGCAAAGGGCCTCTGTCCT...CCTGCGGCTGCTGGGGACGTCACAAATGAGCTCAGATGCCCGTGGCCTGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp AACATCCTTCAGCTCCGCCTCCGAGAGACCGTGTCGGGAAGACACAATGTAGCCTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NILQLRLRETVSGRHNVACCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...GGCTACATTGTGTCTTCCCGACACGGTCTCTCGGAGGCGGAGCTGAAGGATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTTCTTGGGGTTCACCAAGTCGCGGCTCCACGGCAGGCGGTGGGTCTTGAGGACTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: VLGVHQVAAPRQAVGLEDCLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...GTCCTCAAGACCCACCGCCTGCCGTGGAGCCGCGACTTGGTGAACCCCAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCGGCCGTATCCAGCTCACGGAGGCGTGTGAGGACCTGGTGATTGGCCCTCACATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGRIQLTEACEDLVIGPHIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...GTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCATGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DVVIGDGQAVLALAQGHACRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCATCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DVVIGDGQAVLALAQGHASTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGCAGGGCGGCAGAGCTaGAGGGCTTCACGGACCAGG +
Preference number: 4 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRAGRQS*RASRTR
Trigger: CCTGGTCCGTGAAGCCCTCCAGCTCTGCCGCCCTGC...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGCAGGGCGGCAGAGCTaGAGGGCTTCACGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHAGRQS*RASRTR
Trigger: CCTGGTCCGTGAAGCCCTCCAGCTCTGCCGCCCTGC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RPGRHASWLSRILTGSAHEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPANWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCTGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VCSRRVQSWCVASSAVVACPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: CLLQAGAELVRGFLCGGGSFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...GCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCAGGCACACCTGGAAGCAGATGCTCTTCAGCAGGCCACGGGCATCTGAGCTCAGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: PGTPGSRCSSAGHGHLSSATRLL*VSKGNA
Trigger: AGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGC...TGAGCTCAGATGCCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPATAWTN*TVSRVP
Trigger: TGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACACAGCTGAGCAGGACTaGGCTTCCCCAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHTAEQD*ASPVRT
Trigger: TGTCCTTACTGGGGAAGCCCAGTCCTGCTCAGCTGT...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGCTGGCCACGCTCCCTTaGTTACTGCCTGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: TLKDEDCGEADATKAPPRLATLP*LLPATA
Trigger: AGCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAG...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCATCGGCCGCATGGTCTaGATACCACAGTTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTIGRMV*IPQFSC
Trigger: GCAGCTAAACTGTGGTATCCAGACCATGCGGCCGAT...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
3UTR CAA 72 bp CCCTCTGGAAGTATCGTGCCACCAGCTCCAGGTCACTaGGCCTGGCAGTCAGATGGTCCCTCAATACCTCCC +
Preference number: 4 (lower is better)
Translates to: PSGSIVPPAPGH*AWQSDGPSIPP
Trigger: GGGAGGTATTGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
3UTR CAA 72 bp AGAGCAAATCTGTGTGCACCGGGCTCAGCGTCCTCCTaGCAGCTGCCAGCAGGAGTTGGATCATCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RANLCAPGSASS*QLPAGVGSSAG
Trigger: GCCAGCAGATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGCCCGGTGCACACAGATTTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 72 bp AGGACGACCCCCGACACGAGGCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCCAGACACCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: RTTPDTRPVNRS*RCSATSRHLIS
Trigger: TGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGTGTCGGGGGTCGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVLFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGCAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VGEGPFGKYFHTPHLSCVQWPGG*SHPRAA
Trigger: GGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTG...CACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: SIVGHCGEAGAVQKWCRHKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...GTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: TLKDEDCGEADATKAPPRSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCAGACTCCACACCTGAATaGGCGCATCAAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASDSTPE*AHQGTP
Trigger: CGGGGTCCCTTGATGCGCTCATTCAGGTGTGGAGTC...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CGCCAAGAATATCCGCACCGATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RQEYPHRSSKACGEEGLISGTCS*LLSGPR
Trigger: CCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGA...GATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATCGGTGCGGATATTCTTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVRGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCATCCTCAGACCCGCTaGCCACCAGCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: DLPKPAARRDSSSETTRNHPQTR*PPAAPC
Trigger: ACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATG...GTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CAGATGGTCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QMVPQYLPLLLIDPRGNQAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...CTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGACCATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR TCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTTCTTGGGGTTCACCAAGTCGCGGCTCCACGGCAGGCGGTGGGTCTTGAGGACCATTGGGTAAGCCCTTaGTTCACAGAGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLGVHQVAAPRQAVGLEDHWVSP*FTEKQW
Trigger: CCACTGCTTCTCTGTGAATCAAGGGCTTACCCAATG...GTCCTCAAGACCCACCGCCTGCCGTGGAGCCGCGACTTGGTGAACCCCAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGCCTTTGCTGGTAGTTaGACGACCAATTTAGACTCC +
Preference number: 4 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRAFAGS*TTNLDS
Trigger: GGAGTCTAAATTGGTCGTTCAACTACCAGCAAAGGC...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACACGAGGGACCAGAGGTTaGCTGGTTTGGCATTTGCAA +
Preference number: 4 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTRGTRG*LVWHLQ
Trigger: TTGCAAATGCCAAACCAGTCAACCTCTGGTCCCTCG...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR GCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACTCAAACATCAAGCCGTaGCTCTGGCAGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHSNIKP*LWQKVW
Trigger: CCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGA...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCTCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESSCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGGAGGGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCACAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRVWKNWTTLVWASRTWAQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSSCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACTGTGGGGAAGCAGATaGCACCAAAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSLWGSR*HQSPAA
Trigger: CGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCAGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASAVQKW*RHPGPM
Trigger: CATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGC...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCATCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQGHAVD*FPGLGR
Trigger: CCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCC...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AAESCPEGSSRGLEESSEKRFGS*TLVKKE
Trigger: CTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTT...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QPLRVARRGPPGGWRNPPKRFGS*TLVKKE
Trigger: CTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTT...CGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCTTCCACTTGCGTGCCTaGAGGTCCCAGAGACACAGC +
Preference number: 4 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFFHLRA*RSQRHS
Trigger: GCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAA...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACATCTCGAATTTCCACTTaGGTGCCTGCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTSRIST*VPAGPR
Trigger: TCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGA...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TCCGGCCGTATCCAGCTCACGGAGGCGTGTGAGGACCTGGTGATTGGCCCTCACCGCTCCCTTGGTTACTaGCTGCAACAGCTGATATGT +
Preference number: 4 (lower is better)
Translates to: SGRIQLTEACEDLVIGPHRSLGY*LQQLIC
Trigger: ACATATCAGCTGTTGCAGGCAGTAACCAAGGGAGCG...GTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR GCA 90 bp GGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGGACTGGTTTGGCATTTaGAAGAAATGCAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: GPRGAARVSAPGGCRVGADWFGI*KKCRLL
Trigger: CAACAGTCTGCATTTCTTGCAAATGCCAAACCAGTC...CGCACCAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp CGCCAAGAATATCCGCACCGATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: RQEYPHRSSKACGEEGLIQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...GATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATCGGTGCGGATATTCTTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGGCTGGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SCAPAALASAQPACTSGLAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...CAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGCCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAGATGGTCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: QMVPQYLPLLLIDPRGNQGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...CTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGACCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGGAGGGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCACTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RRVWKNWTTLVWASRTWALLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGAGGCTGCTGAGAAGGTTCTGGGCATCAGCGTCCAGGCAGCCATCCGCGAGAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FEAAEKVLGISVQAAIRESFLVP*LQVPEK
Trigger: CTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCT...CTCGCGGATGGCTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAGCCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RTSSSRDKTSFSSASERPSFLVP*LQVPEK
Trigger: CTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCT...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTATGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGTGGCCTGGGAGGCCAGCACGGCCATGCACATCCAAGGATCAGAGGCATCTCCCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CGLGGQHGHAHPRIRGISPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...GGAGATGCCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CCACAAACTGCTCACCCAGCTCCTTCAGGTAGCAGGCGTGAGTCTTGTTCTTGGACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PQTAHPAPSGSRRESCSWTLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...CCAAGAACAAGACTCACGCCTGCTACCTGAAGGAGCTGGGTGAGCAGTTTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCTCACTGACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PVNRSLRCSATSRHLISLTLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...CAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPASFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: LISLEVSRESCSSPSAKSGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp TGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCATATCACGTCCTGCCTaGAATTCAGGGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: CLLQAGAELVRGFLCGGGISRPA*NSGGTQ
Trigger: TTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATAT...GCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCATCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DVVIGDGQAVLALAQGHASDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: AAESCPEGSSRGLEESSEPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCTGCGGGGCCACCTTTCGGTCCAAGTTCAGTGGTTTCCCCACAAGTGGCAGAGTCCCAGCAGGCTCCTTaGACCCGAATTCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: AAGPPFGPSSVVSPQVAESQQAP*TRIHFS
Trigger: GCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTGGGA...CTCTGCCACTTGTGGGGAAACCACTGAACTTGGACCGAAAGGTGGCCCCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKQWPGG*SHPRAA
Trigger: GGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVLAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGAGCGTAGGACAGAAGTTAAGGTGGCCTCCTCTGGTTCACAGGCCTCCCCAGGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QSVGQKLRWPPLVHRPPQVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...CTGGGGAGGCCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCCTACGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCCATGCCATGGCGGTaGTGCCTTTGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPMPWR*CLCDSR
Trigger: GCGGCTGTCACAAAGGCATCACCGCCATGGCATGGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TGTGCGCACAACTGGAACCAGCTCTGGGCCTGTTGGCATAGCTGTCCCACCAGTTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: CAHNWNQLWACWHSCPTSSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGGCTGAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 4 (lower is better)
Translates to: SCAPAALASAQPACTSGLKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...CAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCAAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ARVPLANIFTHLTSPVCPRGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...TGGACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCATCTTGGCCCATCGATaGCCGGGCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATILAHR*PGRGPR
Trigger: CCGGGGACCCCTGCCCGGTCATCGATGGGCCAAGAT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGATCTTGGCCCATCGATaGCCGGGCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWILAHR*PGRGPR
Trigger: CCGGGGACCCCTGCCCGGTCATCGATGGGCCAAGAT...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTCTGAGCTCAGCCCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: WISLRKTVAPCSRSSELSPLEVS*HQLQVT
Trigger: AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG...GCTGAGCTCAGAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHRVQSW*VASSAV
Trigger: CACCGCAGAGGAAGCCACGCACCAACTCTGCACCCG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVRVQSW*VASSAV
Trigger: CACCGCAGAGGAAGCCACGCACCAACTCTGCACCCG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACGAGGCCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRPVNRSLRCSATSRHLISRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...GATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCAGCAGGTCTTCAATaGCCCCAGAGATGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPAGLQ*PQRCPG
Trigger: GCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPAVTSFP*FWTETA
Trigger: TGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTAC...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp GTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGCTGTGGGGAAGCAGATaGCACCAAAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: VGEGPFGKYFHTPHLSCVLWGSR*HQSPAA
Trigger: CGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAG...CACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCATTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPALFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp TTTGAGGCTGCTGAGAAGGTTCTGGGCATCAGCGTCCAGGCAGCCATCCGCGAGAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FEAAEKVLGISVQAAIRENRSLR*SATSRH
Trigger: GTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATT...CTCGCGGATGGCTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAGCCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCCCTCGGGAGGGGGAATaGATATCACGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSPREGE*ISRPAW
Trigger: CCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGG...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQGPHWS*CRPRGS
Trigger: ACTACCGCGTGGTCTACAGCATGACCAATGGGGACC...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTTGGGGAAGTAGACGTAGCTTCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: FGEVDVASIVGHCGEAGAGPHWS*CRPRGS
Trigger: ACTACCGCGTGGTCTACAGCATGACCAATGGGGACC...CGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGCTACGTCTACTTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCCCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GDRATPSASAGLQPYVRTPLTTS*SLWLTS
Trigger: GGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGG...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGCAACACCTTAGAAGCTaGTGCCCAATACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: IVGHCGEAGAVQKWCRHPQHLRS*CPIHPS
Trigger: GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTG...CGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTCTGAGCTCAGCTCACTCATGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WISLRKTVAPCSRSSELSSLMLE*SGAISA
Trigger: AGCCGAGATCGCACCACTGCACTCCAGCATGAGTGA...GCTGAGCTCAGAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CAAGTAGTATCCCAGATCCCGACGAAGCCGCACCCACAGCAGGGGCGGGAAGCGATACCACAGTTTAGCTaGAGCCTGCTGATCTCACTG +
Preference number: 4 (lower is better)
Translates to: QVVSQIPTKPHPQQGREAIPQFS*SLLISL
Trigger: CAGTGAGATCAGCAGGCTGCAGCTAAACTGTGGTAT...CGCTTCCCGCCCCTGCTGTGGGTGCGGCTTCGTCGGGATCTGGGATACTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGCAGGGCTTCCCTCTCTaGATCCATATCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGQGFPL*IHILAS
Trigger: GGATGCCAAGATATGGATGCAGAGAGGGAAGCCCTG...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CGCCAAGAATATCCGCACCGATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCATCAAGCCGTGCCTCTaGCAGAAGGTCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: RQEYPHRSSKACGEEGLIIKPCL*QKVWHF
Trigger: GAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTGAT...GATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATCGGTGCGGATATTCTTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGAGGGCAACAAAAGCTaGCCCTATGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IVGHCGEAGAVQKWCRHPEGNKS*PYGCFP
Trigger: TGGAAAACATCCATAGGGCCAGCTTTTGTTGCCCTC...CGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp CAGAGCGTAGGACAGAAGTTAAGGTGGCCTCCTCTGGTTCACAGGCCTCCCCAGGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: QSVGQKLRWPPLVHRPPQAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...CTGGGGAGGCCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCCTACGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAGAACTCGTGTACTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VILGEASTLDPSAVRTRVLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...TACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGGGGAAGTAGACGTAGCTTCCATTGTGGGACACTGCGGTGAGGCCGGTGCGCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: FGEVDVASIVGHCGEAGARESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...CGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGCTACGTCTACTTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCTCACTGGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PVNRSLRCSATSRHLISLVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...CAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCGGCCGTATCCAGCTCACGGAGGCGTGTGAGGACCTGGTGATTGGCCCTCACCTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SGRIQLTEACEDLVIGPHLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...GTGAGGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGCTGGATACGGCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCTGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGCAGGGCGGCAGAGCTaGAGGGCTTCACGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKAGRQS*RASRTR
Trigger: CCTGGTCCGTGAAGCCCTCCAGCTCTGCCGCCCTGC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCGCAGGGCGGCAGAGCTaGAGGGCTTCACGGACCAGG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELAGRQS*RASRTR
Trigger: CCTGGTCCGTGAAGCCCTCCAGCTCTGCCGCCCTGC...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTTCTTGGGGTTCACCAAGTCGCGGCTCCACGGCAGGCGGTGGGTCTTGAGGACCGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: VLGVHQVAAPRQAVGLEDRRNGV*PAVLCT
Trigger: TGTACACAGAACTGCTGGCCAGACTCCATTTCTTCG...GTCCTCAAGACCCACCGCCTGCCGTGGAGCCGCGACTTGGTGAACCCCAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RTSSSRDKTSFSSASERPPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: VGEGPFGKYFHTPHLSCVVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...CACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHSFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGGCTGGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGC +
Preference number: 4 (lower is better)
Translates to: SCAPAALASAQPACTSGLERGPH*SCCRPR
Trigger: GCGTGGTCTACAGCATGACCAATGGGGACCTCTTTC...CAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCAACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASTSCSL*LTSTQA
Trigger: TGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGT...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: KMRTVGKQMPPKPRRGPAEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...TGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTTCTTGGGGTTCACCAAGTCGCGGCTCCACGGCAGGCGGTGGGTCTTGAGGACGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: VLGVHQVAAPRQAVGLEDEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...GTCCTCAAGACCCACCGCCTGCCGTGGAGCCGCGACTTGGTGAACCCCAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 72 bp GCAGGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACCACAGAGGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: AGDRATPSASAG*QPYVRTTEAAG
Trigger: CCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATLFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTGCAGGCGGTGGGTCTTaGGGACCCCTGGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSAGGGS*GPLGAC
Trigger: ACATGCACCCAGGGGTCCTCAAGACCCACCGCCTGC...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATGCTGTCATCGTGCCTaGGCTGCTGCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKCCHRA*AAAQAG
Trigger: CCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCTGCTGTCATCGTGCCTaGGCTGCTGCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATCCHRA*AAAQAG
Trigger: CCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCA...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGCTGTCATCGTGCCTaGGCTGCTGCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWCCHRA*AAAQAG
Trigger: CCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: HSIQQEHERLEVSARDSVGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTPDPWP*IGESPS
Trigger: CGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGG...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHPDPWP*IGESPS
Trigger: CGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPKPAARRDSSSETTRNLPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...GAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATRGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGCTGCTCCTTGTGGCTaGCCTCCACACAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHAAPCG*PPHRQL
Trigger: GAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGACTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACAGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TGNSAPVGLQGKRFGSCTALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...TGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELSCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCTCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHQCPQR*PGRKSS
Trigger: GCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: LISLEVSRESCSSPSAKSLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGGGCTGAGCATGTGGATCACATaGTGCTCTTCCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SCAPAALASAQPACTSGLSMWIT*CSSMSH
Trigger: GTGGGACATGGAAGAGCAGCATGTGATCCACATGCT...CAGCCCTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: GMEKLDHPGVGVQNLGRGVTSFP*FWTETA
Trigger: TGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTAC...CCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHAVQKW*RHPGPM
Trigger: CATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSAVQKW*RHPGPM
Trigger: CATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGC...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTGACAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: VTAAESCPEGSSRGLEESFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...GGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: DCGEADATKAPPRASRLTFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...CGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CAGATGGTCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: QMVPQYLPLLLIDPRGNQVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...CTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGACCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR GCA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRRTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGTGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: IVGHCGEAGAVQKWCRHPWSSGQ*LQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCA...CGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TTCAGCAGGCCACGGGCATCTGAGCTCATTTGTGACGTCCCCAGCAGCCGCAGGCAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGT +
Preference number: 4 (lower is better)
Translates to: FSRPRASELICDVPSSRRQKLAL*MFSNTG
Trigger: ACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTG...CCTGCGGCTGCTGGGGACGTCACAAATGAGCTCAGATGCCCGTGGCCTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCGCTGAGATCCCAGACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLRSQTLKDEDCGEADATGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...GGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCTCACTGCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: PVNRSLRCSATSRHLISLQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...CAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: STQATRLLWVSKGNALEVQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LISLEVSRESCSSPSAKSLLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTCTTCCTCTGCGGTGGTaGCCAGCGGGACAGGCACGG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTLPLRW*PAGQAR
Trigger: CCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAG...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCTTCCTCTGCGGTGGTaGCCAGCGGGACAGGCACGG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMLPLRW*PAGQAR
Trigger: CCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCTGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTCRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGTGCGCACAACTGGAACCAGCTCTGGGCCTGTTGGCATAGCTGTCCCACCAGTGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: CAHNWNQLWACWHSCPTSEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCGCTGAGATCCCAGACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCCAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: SLRSQTLKDEDCGEADATQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...GGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGGAAACGCATTCTCGTCCCTCTGGAAGTATCGTGCCACCAGCTCCAGGTCACTGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKRILVPLEVSCHQLQVTAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGGGACGAGAATGCGTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp TGTGGCCTGGGAGGCCAGCACGGCCATGCACATCCAAGGATCAGAGGCATCTCCGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: CGLGGQHGHAHPRIRGISEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...GGAGATGCCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTTGTTGTCATAGGCGATaGCCAGGCGGTCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: STQATRLLWVSKGNALEVCCHRR*PGGPRT
Trigger: AGTGCGAGGACCGCCTGGCCATCGCCTATGACAACA...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSEWPR*RGSRAA
Trigger: AGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGC +
Preference number: 4 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQERGPH*SCCRPR
Trigger: GCGTGGTCTACAGCATGACCAATGGGGACCTCTTTC...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: LISLEVSRESCSSPSAKSTSCSL*LTSTQA
Trigger: TGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGT...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGCAGGCGGTGGGTCTTaGGGACCCCTGGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGAGGGS*GPLGAC
Trigger: ACATGCACCCAGGGGTCCTCAAGACCCACCGCCTGC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGACGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRRVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGQWPGG*SHPRAA
Trigger: GGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWLCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTGTCCCACACAGCCATaGTGCCATCCTGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVCPTQP*CHPGCQ
Trigger: TTGGCACCCAGGATGGCATCATGGCTGTGTGGGACA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TLKDEDCGEADATKAPPRPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCAAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 4 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ACGAGGCCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TRPVNRSLRCSATSRHLIPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...GATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAATGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TGSAVSRFQALIFEPDAECGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LISLEVSRESCSSPSAKSQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGATCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRSGTCS*LLSGPR
Trigger: CCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGA...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAAAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 4 (lower is better)
Translates to: TGSAVSRFQALIFEPDAERGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGCTGCTCCTTGTGGCTaGCCTCCACACAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: HSIQQEHERLEVSARDSVAAPCG*PPHRQL
Trigger: GAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGC...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CAGCGGGACAGGCACGGTGAAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCAGCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: QRDRHGERGPFPGFLKRQQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...CTGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCTGAGAAGGTTCTGGGCATCAGCGTCCAGGCAGCCATCCGCGAGACAATCAATTCTCACTaGGGCTGTGGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: FEAAEKVLGISVQAAIRETINSH*GCGDGH
Trigger: GTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGT...CTCGCGGATGGCTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAGCCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGAGGGGATGGATATTCTaGACACGTGGTCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALRGWIF*TRGQFL
Trigger: AAGAAACTGACCACGTGTTCAGAATATCCATCCCCT...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGCTATCTCCCACTCAATaGCTGCCACCATGTAAGATG +
Preference number: 4 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWLSPTQ*LPPCKM
Trigger: CATCTTACATGGTGGCAGTCATTGAGTGGGAGATAG...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCTCCCCAGTACCTGGTaGCTGCAGGACGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWLPSTW*LQDVGG
Trigger: CCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GDRATPSASAGLQPYVRTALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATATCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: CFWTETAQVGVSSLMLDISCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAATCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGSAVSRFQALIFEPDAESSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHCLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: LARVPLANIFTHLTSPVCRVQSW*VASSAV
Trigger: CACCGCAGAGGAAGCCACGCACCAACTCTGCACCCG...ACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGAGAACCACAGAGGCTaGGGGGCCACCTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKENHRG*GATFRS
Trigger: GGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LPKPAARRDSSSETTRNLRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...GAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: VGEGPFGKYFHTPHLSCVAVQKW*RHPGPM
Trigger: CATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGC...CACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CCAGGCACACCTGGAAGCAGATGCTCTTCAGCAGGCCACGGGCATCTGAGCTCATTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: PGTPGSRCSSAGHGHLSSLFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...TGAGCTCAGATGCCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKPLTTS*SLWLTS
Trigger: GGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATPLTTS*SLWLTS
Trigger: GGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGTCTTCAATGCCCCCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCACCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GLQCPQRCPGRKSSSCCPPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...TGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CCACAAACTGCTCACCCAGCTCCTTCAGGTAGCAGGCGTGAGTCTTGTTCTTGGATCAAGCCGTGCCTCTaGCAGAAGGTCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: PQTAHPAPSGSRRESCSWIKPCL*QKVWHF
Trigger: GAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTGAT...CCAAGAACAAGACTCACGCCTGCTACCTGAAGGAGCTGGGTGAGCAGTTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCGCTGAGATCCCAGACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCCCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: SLRSQTLKDEDCGEADATPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...GGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWCCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATTGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTAGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 4 (lower is better)
Translates to: VGLQGKRFGSCTLVKKEVAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...GACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: STQATRLLWVSKGNALEVSFLVP*LQVPEK
Trigger: CTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCT...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATGCAGGGCGGCAGAGCTaGAGGGCTTCACGGACCAGG +
Preference number: 4 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHAGRQS*RASRTR
Trigger: CCTGGTCCGTGAAGCCCTCCAGCTCTGCCGCCCTGC...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELTLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMTLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKTLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGGGGAAGTAGACGTAGCTTCCATTGTGGGACACTGCGGTGAGGCCGGTGCGAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: FGEVDVASIVGHCGEAGASFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...CGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGCTACGTCTACTTCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: RTSSSRDKTSFSSASERPAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGAATATCACGTCCTGCCTaGAATTCAGGGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGISRPA*NSGGTQ
Trigger: TTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATAT...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTGTTGTCATAGGCGATaGCCAGGCGGTCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVCCHRR*PGGPRT
Trigger: AGTGCGAGGACCGCCTGGCCATCGCCTATGACAACA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGTCTCGGGCAGCTGAGTGTCATACTTGTCATCCTTaGAGAAGCAAGCACATTGGA +
Preference number: 4 (lower is better)
Translates to: RGSPSEWPRWRGSRAAECHTCHP*RSKHIG
Trigger: TCCAATGTGCTTGCTTCTCCAAGGATGACAAGTATG...ACACTCAGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CCA 90 bp ACGAGGCCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCATCGGCCGCATGGTCTaGATACCACAGTTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: TRPVNRSLRCSATSRHLIIGRMV*IPQFSC
Trigger: GCAGCTAAACTGTGGTATCCAGACCATGCGGCCGAT...GATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATACTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CFWTETAQVGVSSLMLDILCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMLCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGGAAACGCATTCTCGTCCCTCTGGAAGTATCGTGCCACCAGCTCCAGGTCACTAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: RKRILVPLEVSCHQLQVTKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGGGACGAGAATGCGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR TCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: LISLEVSRESCSSPSAKSKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp AGGAGGGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRVWKNWTTLVWASRTWAICCFP*SFPVAE
Trigger: CTCAGCTACGGGAAAACTTCAGGGGAAGCAACATAT...TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWPDPWP*IGESPS
Trigger: CGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGACTCCACACCTGAATaGGCGCATCAAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLDSTPE*AHQGTP
Trigger: CGGGGTCCCTTGATGCGCTCATTCAGGTGTGGAGTC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGACTCCACACCTGAATaGGCGCATCAAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATDSTPE*AHQGTP
Trigger: CGGGGTCCCTTGATGCGCTCATTCAGGTGTGGAGTC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCGACAGACTCCACACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESDRLHT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTGTGGAGTCTGTC...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAGACAGACTCCACACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSDRLHT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTGTGGAGTCTGTC...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCAAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 4 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLCGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCATCTTGGCCCATCGATaGCCGGGCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSILAHR*PGRGPR
Trigger: CCGGGGACCCCTGCCCGGTCATCGATGGGCCAAGAT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCATCTTGGCCCATCGATaGCCGGGCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLILAHR*PGRGPR
Trigger: CCGGGGACCCCTGCCCGGTCATCGATGGGCCAAGAT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGCTGCTCCTTGTGGCTaGCCTCCACACAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKAAPCG*PPHRQL
Trigger: GAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCCATCCTCAGACCCGCTaGCCACCAGCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLHPQTR*PPAAPC
Trigger: ACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATG...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TLKDEDCGEADATKAPPRVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCAGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SIVGHCGEAGAVQKWCRHKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...GTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTGCTGAAGAAGACAGCTaGGCAGGACTGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSAEEDS*AGLGFP
Trigger: GGGGAAGCCCAGTCCTGCTCAGCTGTCTTCTTCAGC...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAATATCTTGGCATCCGTaGGCCTGGTTGGAATGCCGG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSISWHP*AWLECR
Trigger: CCGGCATTCCAACCAGGCTCACGGATGCCAAGATAT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACTGAGATCCCAGACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSLRSQT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTCTGGGATCTCAG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549814.5
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPLEVS*HQLQVT
Trigger: AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSPLEVS*HQLQVT
Trigger: AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHPLEVS*HQLQVT
Trigger: AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCTCCCCAGTACCTGGTaGCTGCAGGACGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMLPSTW*LQDVGG
Trigger: CCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGTCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSSLGI*SASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCAACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: ARVPLANIFTHLTSPVCPTVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...TGGACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGAGGAGTTGGATCATCTaGTGGCCTTGGTTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRRSWII*WPWFPE
Trigger: TTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCT...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHRPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRVQSW*VASSAV
Trigger: CACCGCAGAGGAAGCCACGCACCAACTCTGCACCCG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATTGGGCCACGAGGAGCTaGCCGTGTGTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHWATRS*PCVCSR
Trigger: CCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCA...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGGGCCACGAGGAGCTaGCCGTGTGTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLWATRS*PCVCSR
Trigger: CCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAGAACTCGTGTATCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: VILGEASTLDPSAVRTRVSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...TACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR GCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGTCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: DLPKPAARRDSSSETTRNRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...GTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWQCPQR*PGRKSS
Trigger: GCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTCCAGCAGGTCTTCAATaGCCCCAGAGATGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTPAGLQ*PQRCPG
Trigger: GCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGG...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCCAGCAGGTCTTCAATaGCCCCAGAGATGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMPAGLQ*PQRCPG
Trigger: GCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: HDAILGANHQQLLLHTPCMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CGCCAAGAATATCCGCACCGATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: RQEYPHRSSKACGEEGLILFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...GATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATCGGTGCGGATATTCTTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGACAGGGGATGCATATCACGTCCTaGCTGGAATTCAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SLNTSHSFSSIREGIRQGMHITS*LEFRGN
Trigger: GTTCCCCCTGAATTCCAGGCAGGACGTGATATGCAT...CCCCTGTCTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACCTCGGGAGGGGGAATaGATATCACGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKPREGE*ISRPAW
Trigger: CCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCCTCGGGAGGGGGAATaGATATCACGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWPREGE*ISRPAW
Trigger: CCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCCTCGGGAGGGGGAATaGATATCACGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATPREGE*ISRPAW
Trigger: CCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVGPHWS*CRPRGS
Trigger: ACTACCGCGTGGTCTACAGCATGACCAATGGGGACC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTCTGAGCTCAGCCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: WISLRKTVAPCSRSSELSPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...GCTGAGCTCAGAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 4 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCATCCATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACCTGGTAAGGCTGGCGTaGCTGGCACATAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: VIHSIQQEHERLEVSARDLVRLA*LAHSRC
Trigger: GCACCTACTATGTGCCAGGCACGCCAGCCTTACCAG...GTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGCCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRPSRVL*SSGQWL
Trigger: AAGCCACTGACCACTTGACCACAGAACTCTGCTTGG...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCATCCATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VIHSIQQEHERLEVSARDGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...GTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCCCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLSLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATATGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CFWTETAQVGVSSLMLDICCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTCATCGATCCGCGAGGGAATCAGACAGGGGCCGTACTGATCACCGATGAGGGCTGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: LIDPRGNQTGAVLITDEGCLWRS*ISLRKT
Trigger: CGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACA...GCCCTCATCGGTGATCAGTACGGCCCCTGTCTGATTCCCTCGCGGATCGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGATGGTCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: QMVPQYLPLLLIDPRGNQVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...CTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGACCATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: STQATRLLWVSKGNALEVIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCCTTCCTCTGCGGTGGTaGCCAGCGGGACAGGCACGG +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLLPLRW*PAGQAR
Trigger: CCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAG...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSFLVP*LQVPEK
Trigger: CTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGCGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQRRNGV*PAVLCT
Trigger: TGTACACAGAACTGCTGGCCAGACTCCATTTCTTCG...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTCTGAGCTCAGCTGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WISLRKTVAPCSRSSELSCPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...GCTGAGCTCAGAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACATCCTTCAGCTCCGCCTCCGAGAGACCGTGTCGGGAAGACACAATGTAGCCGTAAAAGGTGTATCTTaGCCCATCGATGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: NILQLRLRETVSGRHNVAVKGVS*PIDDRA
Trigger: TGCCCGGTCATCGATGGGCCAAGATACACCTTTTAC...GGCTACATTGTGTCTTCCCGACACGGTCTCTCGGAGGCGGAGCTGAAGGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCAGTAAAAGGTGTATCTTaGCCCATCGATGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASVKGVS*PIDDRA
Trigger: TGCCCGGTCATCGATGGGCCAAGATACACCTTTTAC...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAATCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ARETRSFCKRQCGGGYGKSEWPR*RGSRAA
Trigger: AGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGA...TTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCCCAGCAGGCTCCTTaGACCCGAATTCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSQQAP*TRIHFS
Trigger: GCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTGGGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACTGAGGCCCCAGTTCTaGGTCCCAGCATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKLRPQF*VPASLQ
Trigger: CTGGAGAGATGCTGGGACCCAGAACTGGGGCCTCAG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp CTGCCACCATGTAAGATGTGCCTCTTTGCTTCTCCTTaGCCTTCAGCCATGATTGTGAGGCCTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPPCKMCLFASP*PSAMIVRPPQP
Trigger: TGGCTGGGGAGGCCTCACAATCATGGCTGAAGGCAAAGGAGAAGCAAAGAGGCACATCTTACATGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGACAGGGGCCGTACTaGTCACCGATGAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLRQGPY*SPMRAT
Trigger: TGTTGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLLFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCTGTTCCCGGTCCTCTaGGCTCAGCAGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSLFPVL*AQQAPL
Trigger: GAGCGGAGCCTGCTGAGCTCAGAGGACCGGGAACAG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTGCTGTCATCGTGCCTaGGCTGCTGCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLCCHRA*AAAQAG
Trigger: CCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGSGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAATCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TGSAVSRFQALIFEPDAESGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSGTCS*LLSGPR
Trigger: CCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELSGTCS*LLSGPR
Trigger: CCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTCATCCTCAGACCCGCTaGCCACCAGCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTHPQTR*PPAAPC
Trigger: ACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATG...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: IVGHCGEAGAVQKWCRHPRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...CGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCCCTGACTCAGCCTCCTaGGTAACTGAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: GDRATPSASAGLQPYVRTPDSAS*VTEITG
Trigger: GCCTGTAATCTCAGTTACTCAGGAGGCTGAGTCAGG...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTCATCGTGCCTGAGCTaGTGCCCAAGCCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLSSCLS*CPSRAR
Trigger: CCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGATGA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTTGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LARVPLANIFTHLTSPVCCLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...ACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKCLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGATCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLRVQSW*VASSAV
Trigger: CACCGCAGAGGAAGCCACGCACCAACTCTGCACCCG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLSAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: STQATRLLWVSKGNALEVRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCCAGCAGGTCTTCAATaGCCCCAGAGATGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLPAGLQ*PQRCPG
Trigger: GCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCCACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCAGCATGTGGATCACATaGTGCTCTTCCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSSMWIT*CSSMSH
Trigger: GTGGGACATGGAAGAGCAGCATGTGATCCACATGCT...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: DLPKPAARRDSSSETTRNVTSFP*FWTETA
Trigger: TGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTAC...GTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCTGTGGGGAAGCAGATaGCACCAAAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSLWGSR*HQSPAA
Trigger: CGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTAVQKW*RHPGPM
Trigger: CATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: HSIQQEHERLEVSARDSVGPHWS*CRPRGS
Trigger: ACTACCGCGTGGTCTACAGCATGACCAATGGGGACC...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAATTCCACTTGCGTGCCTaGAGGTCCCAGAGACACAGC +
Preference number: 4 (lower is better)
Translates to: ARETRSFCKRQCGGGYGKFHLRA*RSQRHS
Trigger: GCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAA...TTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTTCCACTTGCGTGCCTaGAGGTCCCAGAGACACAGC +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELFHLRA*RSQRHS
Trigger: GCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCTTCCACTTGCGTGCCTaGAGGTCCCAGAGACACAGC +
Preference number: 4 (lower is better)
Translates to: VGLQGKRFGSCTLVKKEVFHLRA*RSQRHS
Trigger: GCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAA...GACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: GDRATPSASAGLQPYVRTEFPLA*LQVPET
Trigger: TGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTC...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCATCTCGAATTTCCACTTaGGTGCCTGCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSSRIST*VPAGPR
Trigger: TCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGA...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCACCAGCTGCTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: TTSCSLWLTSTQATRLLWSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 4 (lower is better)
Translates to: DDRAGVPGGDVQHQDDVVNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...GACAACATCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTTCTTGGGGTTCACCAAGTCGCGGCTCCACGGCAGGCGGTGGGTCTTGAGGACTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: VLGVHQVAAPRQAVGLEDFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...GTCCTCAAGACCCACCGCCTGCCGTGGAGCCGCGACTTGGTGAACCCCAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAGAGCGTAGGACAGAAGTTAAGGTGGCCTCCTCTGGTTCACAGGCCTCCCCAGAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: QSVGQKLRWPPLVHRPPQSSVVK*SVASMF
Trigger: GAACATTGAAGCCACTGACCACTTGACCACAGAACT...CTGGGGAGGCCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCCTACGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LISLEVSRESCSSPSAKSPSRVL*SSGQWL
Trigger: AAGCCACTGACCACTTGACCACAGAACTCTGCTTGG...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWLLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHCLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GDRATPSASAGLQPYVRTIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCTTCCTCTGCGGTGGTaGCCAGCGGGACAGGCACGG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCLPLRW*PAGQAR
Trigger: CCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTGGCTTCCTCTGCGGTaGTGGCCAGCGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSWLPLR*WPAGQA
Trigger: TGCCTGTCCCGCTGGCCACCACCGCAGAGGAAGCCA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMCRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCGGTCCAAGTTCAGTaGTTTCCCCACAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSVQVQ*FPHKWQ
Trigger: CTGCCACTTGTGGGGAAACCACTGAACTTGGACCGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGCAGGGCGGCAGAGCTaGAGGGCTTCACGGACCAGG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIAGRQS*RASRTR
Trigger: CCTGGTCCGTGAAGCCCTCCAGCTCTGCCGCCCTGC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHVLDVR*RRNGVW
Trigger: CCAGACTCCATTTCTTCGCCACCTCACATCCAGCAC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSVLDVR*RRNGVW
Trigger: CCAGACTCCATTTCTTCGCCACCTCACATCCAGCAC...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSNWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGTCCTCCCGGGGGCTaGAGGAATCCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAGPPGG*RNPPRG
Trigger: GCCCCTCGGAGGATTCCTCCAGCCCCCGGGAGGACC...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TLKDEDCGEADATKAPPRMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLTLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGACAGGGGGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: SLNTSHSFSSIREGIRQGAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...CCCCTGTCTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGTTGTCATAGGCGATaGCCAGGCGGTCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKCCHRR*PGGPRT
Trigger: AGTGCGAGGACCGCCTGGCCATCGCCTATGACAACA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSEWPR*RGSRAA
Trigger: AGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKGSPSE*PRWRGS
Trigger: AGACCCTCTCCAGCGTGGCCATTCTGACGGACTACC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGGAGGGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCACCAAGGGAAACGCTTTaGAAGTTGCACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: RRVWKNWTTLVWASRTWAPRETL*KLHTRK
Trigger: TTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGG...TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VGEGPFGKYFHTPHLSCVTAWTN*TVSRVP
Trigger: CGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...CACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646016.2
CDS-3UTR CCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCTTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: HDAILGANHQQLLLHTPCLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCTGCGGGGCCACCTTTCGGTCCAAGTTCAGTGGTTTCCCCACAAGTGGCAGAGCATACTTGTCATCCTTaGAGAAGCAAGCACATTGGA +
Preference number: 4 (lower is better)
Translates to: AAGPPFGPSSVVSPQVAEHTCHP*RSKHIG
Trigger: TCCAATGTGCTTGCTTCTCCAAGGATGACAAGTATG...CTCTGCCACTTGTGGGGAAACCACTGAACTTGGACCGAAAGGTGGCCCCGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAATCGGCCGCATGGTCTaGATACCACAGTTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSIGRMV*IPQFSC
Trigger: GCAGCTAAACTGTGGTATCCAGACCATGCGGCCGAT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp AGGGCTAGGCGTATGGGCCAATTGGGACCAGTAGAGTaGAGGCTAGGACTGTTGGGAAAGAGAAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RARRMGQLGPVE*RLGLLGKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAACTCTACTGGTCCCAATTGGCCCATACGCCTAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp AAGGGCGCAGTCTTCAAGGATGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KGAVFKDVFVEV*DLSKEDGGSLF
Trigger: GAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACACATCCTTGAAGACTGCGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
3UTR CAA 72 bp GGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCA +
Preference number: 4 (lower is better)
Translates to: GSCGSPRETLWK*HTRKERGPHWS
Trigger: TGACCAATGGGGACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAGACAGGGGCCGTACTaGTCACCGATGAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTRQGPY*SPMRAT
Trigger: TGTTGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLRPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATCGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHRPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHQWPGG*SHPRAA
Trigger: GGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCCTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLLAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLLAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGSGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSLCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCCCATGCCATGGCGGTaGTGCCTTTGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSPMPWR*CLCDSR
Trigger: GCGGCTGTCACAAAGGCATCACCGCCATGGCATGGG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LISLEVSRESCSSPSAKSICCFP*SFPVAE
Trigger: CTCAGCTACGGGAAAACTTCAGGGGAAGCAACATAT...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR TCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGACAGACTCCACACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLDRLHT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTGTGGAGTCTGTC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGACAGACTCCACACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATDRLHT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTGTGGAGTCTGTC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYICGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAATCTTGGCCCATCGATaGCCGGGCAGGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQILAHR*PGRGPR
Trigger: CCGGGGACCCCTGCCCGGTCATCGATGGGCCAAGAT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGCTGCTCCTTGTGGCTaGCCTCCACACAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLAAPCG*PPHRQL
Trigger: GAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCATCCTCAGACCCGCTaGCCACCAGCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLHPQTR*PPAAPC
Trigger: ACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDRATPSASAGLQPYVRTLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACGAGGCCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TRPVNRSLRCSATSRHLIRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...GATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGATGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 4 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCATTGGGTAAGCCCTTaGTTCACAGAGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVHWVSP*FTEKQW
Trigger: CCACTGCTTCTCTGTGAATCAAGGGCTTACCCAATG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR TCA 90 bp ACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACGTACTGATCACCGATaGGGGCTTTTTCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TGNSAPVGLQGKRFGSCTRTDHR*GLFPSL
Trigger: TAAAGAGGGAAAAAGCCCTCATCGGTGATCAGTACG...TGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCTCCCCAGTACCTGGTaGCTGCAGGACGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSLPSTW*LQDVGG
Trigger: CCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMCLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSSLGI*SASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCT...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMTVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGGAAACGCATTCTCGTCCCTCTGGAAGTATCGTGCCACCAGCTCCAGGTCACTGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RKRILVPLEVSCHQLQVTETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGGGACGAGAATGCGTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACAGGAGTTGGATCATCTaGTGGCCTTGGTTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHRSWII*WPWFPE
Trigger: TTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWRPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGTGGGCCACGAGGAGCTaGCCGTGTGTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLWATRS*PCVCSR
Trigger: CCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCA...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTGGGCCACGAGGAGCTaGCCGTGTGTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIWATRS*PCVCSR
Trigger: CCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCCAGCAGGTCTTCAATaGCCCCAGAGATGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLPAGLQ*PQRCPG
Trigger: GCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATACACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: CFWTETAQVGVSSLMLDIHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCTCACTGATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: PVNRSLRCSATSRHLISLMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...CAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCAGCATGTGGATCACATaGTGCTCTTCCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESSMWIT*CSSMSH
Trigger: GTGGGACATGGAAGAGCAGCATGTGATCCACATGCT...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCATGCATATCACGTCCTaGCTGGAATTCAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVMHITS*LEFRGN
Trigger: GTTCCCCCTGAATTCCAGGCAGGACGTGATATGCAT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACATGCATATCACGTCCTaGCTGGAATTCAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHMHITS*LEFRGN
Trigger: GTTCCCCCTGAATTCCAGGCAGGACGTGATATGCAT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGGHAVD*FPGLGR
Trigger: CCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMGHAVD*FPGLGR
Trigger: CCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLGPHWS*CRPRGS
Trigger: ACTACCGCGTGGTCTACAGCATGACCAATGGGGACC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGAAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGKRFGS*TLVKKE
Trigger: CTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTT...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATCACTCATGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKSLMLE*SGAISA
Trigger: AGCCGAGATCGCACCACTGCACTCCAGCATGAGTGA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTGGTAAGGCTGGCGTaGCTGGCACATAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLVRLA*LAHSRC
Trigger: GCACCTACTATGTGCCAGGCACGCCAGCCTTACCAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR CCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRSSVVK*SVASMF
Trigger: GAACATTGAAGCCACTGACCACTTGACCACAGAACT...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: VGEGPFGKYFHTPHLSCVGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...CACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLCCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLCCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: HDAILGANHQQLLLHTPCSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGGTCTTGAGGACCCCTaGGTGCATGTCAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLGLEDP*VHVSDV
Trigger: CACATCACTGACATGCACCCAGGGGTCCTCAAGACC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCTTCCTCTGCGGTGGTaGCCAGCGGGACAGGCACGG +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGILPLRW*PAGQAR
Trigger: CCGTGCCTGTCCCGCTGGCCACCACCGCAGAGGAAG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSFLVP*LQVPEK
Trigger: CTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCT...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCGGTCCAAGTTCAGTaGTTTCCCCACAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VGEGPFGKYFHTPHLSCVSVQVQ*FPHKWQ
Trigger: CTGCCACTTGTGGGGAAACCACTGAACTTGGACCGA...CACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTATCGGTCCAAGTTCAGTaGTTTCCCCACAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVSVQVQ*FPHKWQ
Trigger: CTGCCACTTGTGGGGAAACCACTGAACTTGGACCGA...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CGCCAAGAATATCCGCACCGATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RQEYPHRSSKACGEEGLIMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...GATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATCGGTGCGGATATTCTTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGTAAAAGGTGTATCTTaGCCCATCGATGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHVKGVS*PIDDRA
Trigger: TGCCCGGTCATCGATGGGCCAAGATACACCTTTTAC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGSEWPR*RGSRAA
Trigger: AGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGC +
Preference number: 4 (lower is better)
Translates to: VGEGPFGKYFHTPHLSCVERGPH*SCCRPR
Trigger: GCGTGGTCTACAGCATGACCAATGGGGACCTCTTTC...CACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCAAGGGAAACGCTTTaGAAGTTGCACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASPRETL*KLHTRK
Trigger: TTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGG...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGATRLL*VSKGNA
Trigger: AGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTTSCSL*LTSTQA
Trigger: TGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELTAWTN*TVSRVP
Trigger: CGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCCTTCACAATTTAATTaGGCTCTTCAGTTAAATCAG +
Preference number: 4 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTPSQFN*ALQLNQ
Trigger: CTGATTTAACTGAAGAGCCCAATTAAATTGTGAAGG...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp GAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCTTCTCTCGTTTTCCTaGGTCCCAGCAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EAELARVPLANIFTHLTSLLSFS*VPAGSL
Trigger: CAAGGAGCCTGCTGGGACCCAGGAAAACGAGAGAAG...AGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAGACAGGGGCCGTACTaGTCACCGATGAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLRQGPY*SPMRAT
Trigger: TGTTGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR TCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTGCAGGCGGTGGGTCTTaGGGACCCCTGGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIAGGGS*GPLGAC
Trigger: ACATGCACCCAGGGGTCCTCAAGACCCACCGCCTGC...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGCAGGCGGTGGGTCTTaGGGACCCCTGGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLAGGGS*GPLGAC
Trigger: ACATGCACCCAGGGGTCCTCAAGACCCACCGCCTGC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGCAGGCGGTGGGTCTTaGGGACCCCTGGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQAGGGS*GPLGAC
Trigger: ACATGCACCCAGGGGTCCTCAAGACCCACCGCCTGC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTGCTGTCATCGTGCCTaGGCTGCTGCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHCCHRA*AAAQAG
Trigger: CCCGGCTTGGGCAGCAGCTCAGGCACGATGACAGCA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGCTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLLCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCCCATGCCATGGCGGTaGTGCCTTTGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCPMPWR*CLCDSR
Trigger: GCGGCTGTCACAAAGGCATCACCGCCATGGCATGGG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGTCCCACACAGCCATaGTGCCATCCTGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLCPTQP*CHPGCQ
Trigger: TTGGCACCCAGGATGGCATCATGGCTGTGTGGGACA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHICCFP*SFPVAE
Trigger: CTCAGCTACGGGAAAACTTCAGGGGAAGCAACATAT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGACTCCACACCTGAATaGGCGCATCAAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLDSTPE*AHQGTP
Trigger: CGGGGTCCCTTGATGCGCTCATTCAGGTGTGGAGTC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGACTCCACACCTGAATaGGCGCATCAAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSDSTPE*AHQGTP
Trigger: CGGGGTCCCTTGATGCGCTCATTCAGGTGTGGAGTC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHCGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQCGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKARGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTAGGGGTCCCCGGAGGTaGTGTCCAGCACCAGGACGA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTRGPRR*CPAPGR
Trigger: TCGTCCTGGTGCTGGACATCACCTCCGGGGACCCCT...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGCTGCTCCTTGTGGCTaGCCTCCACACAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSAAPCG*PPHRQL
Trigger: GAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACCATCCTCAGACCCGCTaGCCACCAGCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHHPQTR*PPAAPC
Trigger: ACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATG...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTGCAACCGTATGTGAGAACCACAGAGGCTGCGGGGCCACCTTTCGGTCCAAGTTGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 4 (lower is better)
Translates to: LQPYVRTTEAAGPPFGPSCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...ACTTGGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTCACATACGGTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ATCCGCGAGCCGGTCCACCATCCTAAGGGCGCAGTCTTCAAGGATGTGTTTGTGTGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 4 (lower is better)
Translates to: IREPVHHPKGAVFKDVFVCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...CACAAACACATCCTTGAAGACTGCGCCCTTAGGATGGTGGACCGGCTCGCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGTGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 4 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: STQATRLLWVSKGNALEVRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AACATCCTTCAGCTCCGCCTCCGAGAGACCGTGTCGGGAAGACACAATGTAGCCAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: NILQLRLRETVSGRHNVAKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...GGCTACATTGTGTCTTCCCGACACGGTCTCTCGGAGGCGGAGCTGAAGGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGAGCCTCCTGAGTAACTaGGATTACAGGCACTCACCA +
Preference number: 4 (lower is better)
Translates to: HSIQQEHERLEVSARDSVSLLSN*DYRHSP
Trigger: TGGTGAGTGCCTGTAATCTCAGTTACTCAGGAGGCT...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTCAAACATCAAGCCGTaGCTCTGGCAGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSNIKP*LWQKVW
Trigger: CCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATCAAACATCAAGCCGTaGCTCTGGCAGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKSNIKP*LWQKVW
Trigger: CCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCTCAAACATCAAGCCGTaGCTCTGGCAGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATSNIKP*LWQKVW
Trigger: CCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGA...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGCTCCCCAGTACCTGGTaGCTGCAGGACGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLLPSTW*LQDVGG
Trigger: CCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAG...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTSCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLCLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIASAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAACGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: TGSAVSRFQALIFEPDAERPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGRPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGCTGCCCGTGTGTCTaGTCCAGGCGGGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLSCPCV*SRRVQS
Trigger: ACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATGGGCCACGAGGAGCTaGCCGTGTGTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAWATRS*PCVCSR
Trigger: CCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGAGAACCACAGAGGCTaGGGGGCCACCTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIENHRG*GATFRS
Trigger: GGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLQCPQR*PGRKSS
Trigger: GCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCTGTGGGGAAGCAGATaGCACCAAAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGILWGSR*HQSPAA
Trigger: CGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACTGTGGGGAAGCAGATaGCACCAAAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQLWGSR*HQSPAA
Trigger: CGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVLFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLEFPLA*LQVPET
Trigger: TGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMEFPLA*LQVPET
Trigger: TGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTC...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCTCTCGAATTTCCACTTaGGTGCCTGCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATSRIST*VPAGPR
Trigger: TCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGA...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTTCTCGAATTTCCACTTaGGTGCCTGCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EAELARVPLANIFTHLTSSRIST*VPAGPR
Trigger: TCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGA...AGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCAACACCTTAGAAGCTaGTGCCCAATACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHQHLRS*CPIHPS
Trigger: GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCAGGGCTTCCCTCTCTaGATCCATATCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWQGFPL*IHILAS
Trigger: GGATGCCAAGATATGGATGCAGAGAGGGAAGCCCTG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGAGGGCAACAAAAGCTaGCCCTATGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVEGNKS*PYGCFP
Trigger: TGGAAAACATCCATAGGGCCAGCTTTTGTTGCCCTC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKASLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLCCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLLLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAACTCCACGGCAGGCGGTaGGTCTTGAGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKLHGRR*VLRTPG
Trigger: CCCAGGGGTCCTCAAGACCCACCGCCTGCCGTGGAG...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWCLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCAAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ARVPLANIFTHLTSPVCPSWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...TGGACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMNWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYITLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLATRLL*VSKGNA
Trigger: AGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGTSCSL*LTSTQA
Trigger: TGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTTAWTN*TVSRVP
Trigger: CGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCTGTTTACCACAGCATaGACAAACTGGACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVLFTTA*TNWTVS
Trigger: GCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCCTGTTTACCACAGCATaGACAAACTGGACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESLFTTA*TNWTVS
Trigger: GCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAG...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCTGTTTACCACAGCATaGACAAACTGGACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHLFTTA*TNWTVS
Trigger: GCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GATGTTGTCATAGGCGATGGCCAGGCGGTCCTCGCACTTGCTCAGGGACATGCACCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: DVVIGDGQAVLALAQGHAPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...TGCATGTCCCTGAGCAAGTGCGAGGACCGCCTGGCCATCGCCTATGACAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCTTCTCACTGAGGCTGTaGAGATGGACACAGGCATTT +
Preference number: 4 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTFSLRL*RWTQAF
Trigger: AAATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAA...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTACAGCTGAGCAGGACTaGGCTTCCCCAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTTAEQD*ASPVRT
Trigger: TGTCCTTACTGGGGAAGCCCAGTCCTGCTCAGCTGT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTTCTCTCGTTTTCCTaGGTCCCAGCAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLLSFS*VPAGSL
Trigger: CAAGGAGCCTGCTGGGACCCAGGAAAACGAGAGAAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCTGAGGCCCCAGTTCTaGGTCCCAGCATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSLRPQF*VPASLQ
Trigger: CTGGAGAGATGCTGGGACCCAGAACTGGGGCCTCAG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAGACAGGGGCCGTACTaGTCACCGATGAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLRQGPY*SPMRAT
Trigger: TGTTGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGCAGGCGGTGGGTCTTaGGGACCCCTGGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEAGGGS*GPLGAC
Trigger: ACATGCACCCAGGGGTCCTCAAGACCCACCGCCTGC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGCGGGACAGGCACGGTaGAAGAGGCCCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHAGQAR*KRPISG
Trigger: CCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNQWPGG*SHPRAA
Trigger: GGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCAATGGCCAGGAGGGTaGAGCCATCCACGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLQWPGG*SHPRAA
Trigger: GGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQLAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTTTGTGACAGCCGCTaGGAGTTGCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHLCDSR*ELPGGV
Trigger: GACCCCTCCGGGCAACTCTCAGCGGCTGTCACAAAG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACCCATGCCATGGCGGTaGTGCCTTTGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAPMPWR*CLCDSR
Trigger: GCGGCTGTCACAAAGGCATCACCGCCATGGCATGGG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCCATGCCATGGCGGTaGTGCCTTTGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHPMPWR*CLCDSR
Trigger: GCGGCTGTCACAAAGGCATCACCGCCATGGCATGGG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTGGGGAAGTAGACGTAGCTTCCATTGTGGGACACTGCGGTGAGGCCGGTGCGAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FGEVDVASIVGHCGEAGARIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...CGCACCGGCCTCACCGCAGTGTCCCACAATGGAAGCTACGTCTACTTCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCACCTCCCAGTAGGAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VGSSAGLGFRKGASPPSRSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...CCTACTGGGAGGTGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGATCCCAGACCTGAATaGGCGCATCAAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLDPRPE*AHQGTP
Trigger: CGGGGTCCCTTGATGCGCTCATTCAGGTCTGGGATC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549814.5
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTCTGCATCCATATCTaGAAGGAAGGGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLCIHI*KEGHGG
Trigger: CCCTCCATGCCCTTCCTTGCAGATATGGATGCAGAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379808.7
CDS-3UTR GCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACCTTCAGGGTAGGCAGTaGTCTGCAGGGCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHLQGRQ*SAGLPS
Trigger: AGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAG...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTCAAACATCAAGCCGTaGCTCTGGCAGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSNIKP*LWQKVW
Trigger: CCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCTCCCCAGTACCTGGTaGCTGCAGGACGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGILPSTW*LQDVGG
Trigger: CCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTCGTGCCTGAGCTGCTaGCCAAGCCGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPSCLSC*PSRARS
Trigger: ACTCCTGGCCCGGCTTGGGCAGCAGCTCAGGCACGA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLCLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSTVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCGGGTGCAGAGTTGGTaGGTGGCTTCCTCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTRVQSW*VASSAV
Trigger: CACCGCAGAGGAAGCCACGCACCAACTCTGCACCCG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGAGAACCACAGAGGCTaGGGGGCCACCTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQENHRG*GATFRS
Trigger: GGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGAGAACCACAGAGGCTaGGGGGCCACCTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLENHRG*GATFRS
Trigger: GGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCQCPQR*PGRKSS
Trigger: GCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACCAGCAGGTCTTCAATaGCCCCAGAGATGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAPAGLQ*PQRCPG
Trigger: GCCGGGGCATCTCTGGGGGCATTGAAGACCTGCTGG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGGAGGCTCCTCTCCATaGCTCGGAGCTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHGGSSP*LGAPQQ
Trigger: CTGCTGTGGAGCTCCGAGGCATGGAGAGGAGCCTCC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CTGCCAGCAGGAGTTGGATCATCTGCTGGCCTTGGTTTCCGGAAAGGGGCTTCAATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LPAGVGSSAGLGFRKGASIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...TGAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIAVQKW*RHPGPM
Trigger: CATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMNRSLR*SATSRH
Trigger: GTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAAATGCATATCACGTCCTaGCTGGAATTCAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: ARETRSFCKRQCGGGYGKMHITS*LEFRGN
Trigger: GTTCCCCCTGAATTCCAGGCAGGACGTGATATGCAT...TTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAATGCATATCACGTCCTaGCTGGAATTCAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKMHITS*LEFRGN
Trigger: GTTCCCCCTGAATTCCAGGCAGGACGTGATATGCAT...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTPLTTS*SLWLTS
Trigger: GGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIPLTTS*SLWLTS
Trigger: GGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQPLTTS*SLWLTS
Trigger: GGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGEFPLA*LQVPET
Trigger: TGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTCTCGAATTTCCACTTaGGTGCCTGCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSRIST*VPAGPR
Trigger: TCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGAGAGGGGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 4 (lower is better)
Translates to: WSCCRPRGSPSEWPRWRGDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...CCCTCTCCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACACCTTAGAAGCTGCTaGCCAATACATCCAAGCATA +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSHLRSC*PIHPSI
Trigger: TATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCACCTTAGAAGCTGCTaGCCAATACATCCAAGCATA +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHHLRSC*PIHPSI
Trigger: TATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTCACTCATGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLSLMLE*SGAISA
Trigger: AGCCGAGATCGCACCACTGCACTCCAGCATGAGTGA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCGCTCCCTTGGTTACTaGCTGCAACAGCTGATATGT +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWRSLGY*LQQLIC
Trigger: ACATATCAGCTGTTGCAGGCAGTAACCAAGGGAGCG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCATGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSWSSGQ*LQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCA...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGAGTCCAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: MSSCSRSMAMNRRKPLESSSVVK*SVASMF
Trigger: GAACATTGAAGCCACTGACCACTTGACCACAGAACT...GGACTCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCAGCTCCAGGTCACTTaGCCTGGCAGTCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSQLQVT*PGSQMV
Trigger: GACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAGCCTCCGGGCCTCCTaGGCTCCAGAGCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQESLRAS*APERRT
Trigger: TGTCCTACGCTCTGGAGCCCAGGAGGCCCGGAGGCT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTGCTGCCACTGCTCCTaGGTGATGAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLCCHCS*VMSPSL
Trigger: GAGGCTGGGGCTCATCACCCAGGAGCAGTGGCAGCA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCATGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSCLWRS*ISLRKT
Trigger: CGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACA...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSLLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTGGGCGTCCAGAACCTaGGCAGGGGGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFWASRT*AGGKGS
Trigger: GCTGCCCTTGCCCCCTGCCCAGGTTCTGGACGCCCA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAAAACTGGACCACCCTaGTGTGGGCGTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLKTGPP*CGRPEP
Trigger: AGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCATGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ARVPLANIFTHLTSPVCPWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...TGGACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCTCACTGATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PVNRSLRCSATSRHLISLMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...CAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGTCAGCAGTGTGGCCTaGGAGGCCAGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHVSSVA*EASTAM
Trigger: CATGGCCGTGCTGGCCTCCCAGGCCACACTGCTGAC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKATLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGTAAAAGGTGTATCTTaGCCCATCGATGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATVKGVS*PIDDRA
Trigger: TGCCCGGTCATCGATGGGCCAAGATACACCTTTTAC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLATRLL*VSKGNA
Trigger: AGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLTSCSL*LTSTQA
Trigger: TGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 4 (lower is better)
Translates to: GDRATPSASAGLQPYVRTNCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGACAGGGGTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 4 (lower is better)
Translates to: SLNTSHSFSSIREGIRQGFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...CCCCTGTCTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMTAWTN*TVSRVP
Trigger: TGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
3UTR CAA 72 bp CTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGCTTTCCTTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPLEETKEMEP*LNPVTSFPCFW
Trigger: CCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCAATTTTCGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: FLAFCQVPNSDFVFVPNFRVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...AAAATTGGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGCGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLRVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGCTCACGGAGGCGTGTaGGGACCTGGTGATTGGCCC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLAHGGV*GPGDWP
Trigger: GGGCCAATCACCAGGTCCTCACACGCCTCCGTGAGC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAACTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQELAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHLAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATCAGGGGAGTCCAGGTaGGGGGCACACAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQSGESR*GAHRSK
Trigger: CTTTGACCTGTGTGCCCCTCACCTGGACTCCCCTGA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACCACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTGTCCCACACAGCCATaGTGCCATCCTGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYICPTQP*CHPGCQ
Trigger: TTGGCACCCAGGATGGCATCATGGCTGTGTGGGACA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKICCFP*SFPVAE
Trigger: CTCAGCTACGGGAAAACTTCAGGGGAAGCAACATAT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTPDPWP*IGESPS
Trigger: CGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAPDPWP*IGESPS
Trigger: CGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGACTCCACACCTGAATaGGCGCATCAAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHDSTPE*AHQGTP
Trigger: CGGGGTCCCTTGATGCGCTCATTCAGGTGTGGAGTC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTGTGGGACACTGCGGTaGGGCCGGTGCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNCGTLR*GRCGPE
Trigger: TTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYISGTCS*LLSGPR
Trigger: CCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGCCTGGTGGGGGCAATaGAGCCACTGGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKAWWGQ*SHWWLG
Trigger: TCCCAACCACCAGTGGCTTCATTGCCCCCACCAGGC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTCCCTGGGCACTTTCTaGCTCCAAGTCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHSLGTF*LQVLGS
Trigger: GCTCCCCAGGACTTGGAGTCAGAAAGTGCCCAGGGA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCATGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCCTGACTCAGCCTCCTaGGTAACTGAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLPDSAS*VTEITG
Trigger: GCCTGTAATCTCAGTTACTCAGGAGGCTGAGTCAGG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAACAATCAATTCTCACTaGGGCTGTGGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKTINSH*GCGDGH
Trigger: GTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGT...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGCTGAAGAAGACAGCTaGGCAGGACTGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLAEEDS*AGLGFP
Trigger: GGGGAAGCCCAGTCCTGCTCAGCTGTCTTCTTCAGC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTATATCTTGGCATCCGTaGGCCTGGTTGGAATGCCGG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLISWHP*AWLECR
Trigger: CCGGCATTCCAACCAGGCTCACGGATGCCAAGATAT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCTTCAGGGTAGGCAGTaGTCTGCAGGGCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCLQGRQ*SAGLPS
Trigger: AGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCCTCTGGAAGTATCGTaGCACCAGCTCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSPLEVS*HQLQVT
Trigger: AGTGACCTGGAGCTGGTGGCACGATACTTCCAGAGG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAACTCCCCAGTACCTGGTaGCTGCAGGACGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKLPSTW*LQDVGG
Trigger: CCCACCTACGTCCTGCAGGCACCAGGTACTGGGGAG...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCAATTTTATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: FLAFCQVPNSDFVFVPNFMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...AAAATTGGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTGCTTGCTGTCATCGTaGCTGAGCTGCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCCLLSS*LSCCPS
Trigger: GCTTGGGCAGCAGCTCAGGCACGATGACAGCAAGCA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSSLGI*SASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLSSLGI*SASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCTVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYITPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAGAACTCGTGTAGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VILGEASTLDPSAVRTRVETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...TACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCAGGAGTTGGATCATCTaGTGGCCTTGGTTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGRSWII*WPWFPE
Trigger: TTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLRPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTGGGCCACGAGGAGCTaGCCGTGTGTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNWATRS*PCVCSR
Trigger: CCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAGCGCAGCAGCTCCTTaGTGGGCGGGGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQESAAAP*WAGSNL
Trigger: GAGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCTCACTGATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: PVNRSLRCSATSRHLISLIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...CAGTGAGATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWVTSFP*FWTETA
Trigger: TGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTAC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLLFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGNRSLR*SATSRH
Trigger: GTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLNRSLR*SATSRH
Trigger: GTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCCTCGGGAGGGGGAATaGATATCACGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTPREGE*ISRPAW
Trigger: CCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCGHAVD*FPGLGR
Trigger: CCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCC...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAACCGCTGACCACCAGCTaGTCCTTGTGGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKPLTTS*SLWLTS
Trigger: GGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGG...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTTCCACTTGCGTGCCTaGAGGTCCCAGAGACACAGC +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCFHLRA*RSQRHS
Trigger: GCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGTTCCACTTGCGTGCCTaGAGGTCCCAGAGACACAGC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLFHLRA*RSQRHS
Trigger: GCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAA...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLEFPLA*LQVPET
Trigger: TGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CCACAAACTGCTCACCCAGCTCCTTCAGGTAGCAGGCGTGAGTCTTGTTCTTGGCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PQTAHPAPSGSRRESCSWLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...CCAAGAACAAGACTCACGCCTGCTACCTGAAGGAGCTGGGTGAGCAGTTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHRTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCAACACCTTAGAAGCTaGTGCCCAATACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATQHLRS*CPIHPS
Trigger: GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: HDAILGANHQQLLLHTPCTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTCACTCATGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLSLMLE*SGAISA
Trigger: AGCCGAGATCGCACCACTGCACTCCAGCATGAGTGA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGGACAGAGGCCCTTTaGAGTGTCAGCGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLRTEAL*SVSVLA
Trigger: AGCCAGAACGCTGACACTGCAAAGGGCCTCTGTCCT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAGGACAGAGGCCCTTTaGAGTGTCAGCGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLRTEAL*SVSVLA
Trigger: AGCCAGAACGCTGACACTGCAAAGGGCCTCTGTCCT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTATACCACAGTTTAGCTaGAGCCTGCTGATCTCACTG +
Preference number: 4 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSIPQFS*SLLISL
Trigger: CAGTGAGATCAGCAGGCTGCAGCTAAACTGTGGTAT...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCATACCACAGTTTAGCTaGAGCCTGCTGATCTCACTG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELIPQFS*SLLISL
Trigger: CAGTGAGATCAGCAGGCTGCAGCTAAACTGTGGTAT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCATCAAGCCGTGCCTCTaGCAGAAGGTCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSIKPCL*QKVWHF
Trigger: GAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTGAT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGPSRVL*SSGQWL
Trigger: AAGCCACTGACCACTTGACCACAGAACTCTGCTTGG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGT +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWQKLAL*MFSNTG
Trigger: ACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGT +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELQKLAL*MFSNTG
Trigger: ACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ATCTTGTTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: ILFLAFCQVPNSDFVFVPCLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...GGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAAAACTGGACCACCCTaGTGTGGGCGTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLKTGPP*CGRPEP
Trigger: AGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHCRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKACRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTCGGTCCAAGTTCAGTaGTTTCCCCACAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGSVQVQ*FPHKWQ
Trigger: CTGCCACTTGTGGGGAAACCACTGAACTTGGACCGA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKRRNGV*PAVLCT
Trigger: TGTACACAGAACTGCTGGCCAGACTCCATTTCTTCG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLVLDVR*RRNGVW
Trigger: CCAGACTCCATTTCTTCGCCACCTCACATCCAGCAC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGNWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGGGTGTGCGCACAACTaGAACCAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHGCAHN*NQLWAC
Trigger: ACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACACCC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWCPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKCPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTSFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGGTGCGGTCCAGAAATaGTGCAGGCACCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHGAVQK*CRHPGP
Trigger: AGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGATATCACGTCCTGCCTaGAATTCAGGGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWISRPA*NSGGTQ
Trigger: TTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATAT...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGTAAAAGGTGTATCTTaGCCCATCGATGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGVKGVS*PIDDRA
Trigger: TGCCCGGTCATCGATGGGCCAAGATACACCTTTTAC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKASEWPR*RGSRAA
Trigger: AGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLGSPSE*PRWRGS
Trigger: AGACCCTCTCCAGCGTGGCCATTCTGACGGACTACC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCATTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCATTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: ARVPLANIFTHLTSPVCPLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...TGGACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CAGATGGTCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: QMVPQYLPLLLIDPRGNQPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...CTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGACCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACCTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGCAGTGTCAGCGTTCTaGCTGTCCTGGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKAVSAF*LSWGLQ
Trigger: CTGGAGCCCCCAGGACAGCCAGAACGCTGACACTGC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000524140.7
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCTGGCCACGCTCCCTTaGTTACTGCCTGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCLATLP*LLPATA
Trigger: AGCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCATCCGTGAGCCTGGTTaGAATGCCGGCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIIREPG*NAGSSI
Trigger: GATGGAGGAGCCGGCATTCCAACCAGGCTCACGGAT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp TCTCTCTGCCTGGATTTGACCATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCCTGCGGTGAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SLCLDLTIHIAF*KFLRGSCGEAF
Trigger: AAAAGCCTCACCGCAGGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp CCTGCAGCTGCAACTAGCTCCTCTCTCTGCCTGGATTaGACCATCCACATTGCCTTCTTGAAGTTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: PAAATSSSLCLD*TIHIAFLKFLR
Trigger: TCTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAGAGGAGCTAGTTGCAGCTGCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp GAAGTGTCTAGATTAGTCACTAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAAGAGATGGTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EVSRLVTSSCEH*SVVPVEEMVVL
Trigger: GAGCACAACCATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCTAGACACTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp CAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: QRVSSTSAACNP*KQSWRGSLWQI
Trigger: TATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTAGACAGGGGCCGTACTaGTCACCGATGAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTRQGPY*SPMRAT
Trigger: TGTTGCCCTCATCGGTGATCAGTACGGCCCCTGTCT...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKARVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACGTGTGAGGACCTGGTaGTTGGCCCTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQRVRTW*LALTTN
Trigger: GTTTGTGGTGAGGGCCAATCACCAGGTCCTCACACG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAACGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKRPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAACGTCCGCAGAAGGTCTaGATGACCTCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQERPQKV*MTSELC
Trigger: GCAGAGCTCGGAGGTCATTCAGACCTTCTGCGGACG...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGTGCCCCCGAGCAAGCTaGGAGGATGAGGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLCPRAS*EDEVHP
Trigger: AGGGTGCACCTCATCCTCTCAGCTTGCTCGGGGGCA...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGGCTCTCTCGGATCCTaGCAGGTAGCGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLGSLGS*QVALTD
Trigger: GTCCGTGAGCGCTACCTGTCAGGATCCGAGAGAGCC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCTGGCTCCAGGTCCCTaGGAAGAAGTCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLLAPGP*EEVGQD
Trigger: GTCCTGGCCGACTTCTTCTCAGGGACCTGGAGCCAG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGCGGTGATGCCTTTGTaGCAGCCGCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKAVMPL*QPLRVA
Trigger: GGCAACTCTCAGCGGCTGTCACAAAGGCATCACCGC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTGTCCCACACAGCCATaGTGCCATCCTGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLCPTQP*CHPGCQ
Trigger: TTGGCACCCAGGATGGCATCATGGCTGTGTGGGACA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCCAGATCCATGGCCATaGATCGGCGAAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHPDPWP*IGESPS
Trigger: CGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGACAGACTCCACACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIDRLHT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTGTGGAGTCTGTC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHSGTCS*LLSGPR
Trigger: CCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGCTGCTCCTTGTGGCTaGCCTCCACACAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEAAPCG*PPHRQL
Trigger: GAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAACATCCTCAGACCCGCTaGCCACCAGCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEHPQTR*PPAAPC
Trigger: ACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATG...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: LARVPLANIFTHLTSPVCQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...ACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCCTGACTCAGCCTCCTaGGTAACTGAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLPDSAS*VTEITG
Trigger: GCCTGTAATCTCAGTTACTCAGGAGGCTGAGTCAGG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGCCTTTGCTGGTAGTTaGACGACCAATTTAGACTCC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMAFAGS*TTNLDS
Trigger: GGAGTCTAAATTGGTCGTTCAACTACCAGCAAAGGC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000524140.7
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGCTGAAGAAGACAGCTaGGCAGGACTGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHAEEDS*AGLGFP
Trigger: GGGGAAGCCCAGTCCTGCTCAGCTGTCTTCTTCAGC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGCTGAAGAAGACAGCTaGGCAGGACTGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEAEEDS*AGLGFP
Trigger: GGGGAAGCCCAGTCCTGCTCAGCTGTCTTCTTCAGC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCAGGGCTTCCCTCTCTaGATCCATATCTGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLQGFPL*IHICKE
Trigger: TTCCTTGCAGATATGGATGCAGAGAGGGAAGCCCTG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379808.7
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHSRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIRPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTCTCGGTACACATCCTaGAGGACCTCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLSRYTS*RTSSSR
Trigger: CCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGAGAACCACAGAGGCTaGGGGGCCACCTTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFENHRG*GATFRS
Trigger: GGACCGAAAGGTGGCCCCGCAGCCTCTGTGGTTCTC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTCCATTGTGGGACACTaGGGTGAGGCCGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFSIVGH*GEAGAV
Trigger: GACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTLFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAACCTCGGGAGGGGGAATaGATATCACGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEPREGE*ISRPAW
Trigger: CCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGG...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIGHAVD*FPGLGR
Trigger: CCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCC...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTTCCACTTGCGTGCCTaGAGGTCCCAGAGACACAGC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHFHLRA*RSQRHS
Trigger: GCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGAATTTCCACTTGCGTaGCTGCAGGTCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLEFPLA*LQVPET
Trigger: TGTCTCTGGGACCTGCAGGCACGCAAGTGGAAATTC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCGCTGAGATCCCAGACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 4 (lower is better)
Translates to: SLRSQTLKDEDCGEADATNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...GGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCAACACCTTAGAAGCTaGTGCCCAATACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGQHLRS*CPIHPS
Trigger: GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCACATTGGACCCCTCTaGAGTAAGAACTCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLHIGPL*SKNSCS
Trigger: GCTACACGAGTTCTTACTGCAGAGGGGTCCAATGTG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR GCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAAGACTGTTGCATTTTTaGCAACAGGGGATGGATATT +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRLLHF*QQGMDI
Trigger: AATATCCATCCCCTGTTGGCAAAAATGCAACAGTCT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKWSSGQ*LQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGTGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMWSSGQ*LQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCA...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKSSVVK*SVASMF
Trigger: GAACATTGAAGCCACTGACCACTTGACCACAGAACT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMQKLAL*MFSNTG
Trigger: ACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGAGGGCAACAAAAGCTaGCCCTATGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTEGNKS*PYGCFP
Trigger: TGGAAAACATCCATAGGGCCAGCTTTTGTTGCCCTC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGGCCTGGCAGTCAGATaGTCCCTCAATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQGLAVR*SLNTSH
Trigger: GTGGGAGGTATTGAGGGACCATCTGACTGCCAGGCC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCCAGGTCACTTGGCCTaGCAGTCAGATGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIPGHLA*QSDGPS
Trigger: TGAGGGACCATCTGACTGCCAGGCCAAGTGACCTGG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGCATTCTCGTCCCTCTaGAAGTATCGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIAFSSL*KYRATS
Trigger: GCTGGTGGCACGATACTTCCAGAGGGACGAGAATGC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGGCCTCCCCAGTACCTaGTGCCTGCAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFGLPST*CLQDVG
Trigger: ACCTACGTCCTGCAGGCACCAGGTACTGGGGAGGCC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAATGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: ARETRSFCKRQCGGGYGKCLWRS*ISLRKT
Trigger: CGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACA...TTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: WRGSLWQIFSHTSPLLCVSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...GACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCTGCTGAGAAGGTTCTaGGCATCAGCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTLLRRF*ASASRQ
Trigger: CTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGGTCTTGAGGACCCCTaGGTGCATGTCAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLGLEDP*VHVSDV
Trigger: CACATCACTGACATGCACCCAGGGGTCCTCAAGACC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLCLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGTGGACCACCCTGGTGTaGGCGTCCAGAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLWTTLV*ASRTWA
Trigger: TGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCA...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAAAACTGGACCACCCTaGTGTGGGCGTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLKTGPP*CGRPEP
Trigger: AGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLSWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPCRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATGCAGAGTTGGTGCGTaGCTTCCTCTGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKCRVGA*LPLRWW
Trigger: CCACCACCGCAGAGGAAGCCACGCACCAACTCTGCA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAGGCGGGTGCAGAGTTaGTGCGTGGCTTCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFRRVQS*CVASSA
Trigger: CGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGCAGCAGCTCCTTGCTaGGCGGGGTCCAATCTCGGT +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNAAAPC*AGSNLG
Trigger: ACCGAGATTGGACCCCGCCCAGCAAGGAGCTGCTGC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATCGACCAGCTGTCTGTaGGCAATGGCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKSTSCL*AMARRV
Trigger: CACCCTCCTGGCCATTGCCCACAGACAGCTGGTCGA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTCGGTCCAAGTTCAGTaGTTTCCCCACAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSVQVQ*FPHKWQ
Trigger: CTGCCACTTGTGGGGAAACCACTGAACTTGGACCGA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTCGGTCCAAGTTCAGTaGTTTCCCCACAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLSVQVQ*FPHKWQ
Trigger: CTGCCACTTGTGGGGAAACCACTGAACTTGGACCGA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSVLDVR*RRNGVW
Trigger: CCAGACTCCATTTCTTCGCCACCTCACATCCAGCAC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGCCATGATGCCATCCTaGGTGCCAATCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQAMMPS*VPITSS
Trigger: GCTGCTGGTGATTGGCACCCAGGATGGCATCATGGC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCACACTGTCAGCAGTGTaGCCTGGGAGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFTLSAV*PGRPAR
Trigger: CCGTGCTGGCCTCCCAGGCCACACTGCTGACAGTGT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTGTTGTCATAGGCGATaGCCAGGCGGTCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLCCHRR*PGGPRT
Trigger: AGTGCGAGGACCGCCTGGCCATCGCCTATGACAACA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTCAGAATGGCCACGCTaGAGAGGGTCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPSEWPR*RGSRAA
Trigger: AGCTGCCCGAGACCCTCTCCAGCGTGGCCATTCTGA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIGSPSE*PRWRGS
Trigger: AGACCCTCTCCAGCGTGGCCATTCTGACGGACTACC...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLGSPSE*PRWRGS
Trigger: AGACCCTCTCCAGCGTGGCCATTCTGACGGACTACC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLERGPH*SCCRPR
Trigger: GCGTGGTCTACAGCATGACCAATGGGGACCTCTTTC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGC +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLERGPH*SCCRPR
Trigger: GCGTGGTCTACAGCATGACCAATGGGGACCTCTTTC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQTSCSL*LTSTQA
Trigger: TGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYITAWTN*TVSRVP
Trigger: CGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTGTTTACCACAGCATaGACAAACTGGACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLFTTA*TNWTVS
Trigger: GCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTCTGACTCCAAGTCCTaGGGAGCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTSDSKS*GAPAAA
Trigger: TGCAGCTGCAGGAGCTCCCCAGGACTTGGAGTCAGA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGCTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGCTGAGGCTGTGGAGATaGACACAGGCATTTAAAATC +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMLRLWR*TQAFKI
Trigger: GATTTTAAATGCCTGTGTCCATCTCCACAGCCTCAG...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCACAGCTGAGCAGGACTaGGCTTCCCCAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYITAEQD*ASPVRT
Trigger: TGTCCTTACTGGGGAAGCCCAGTCCTGCTCAGCTGT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATGTCCCACACAGCCATaGTGCCATCCTGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKCPTQP*CHPGCQ
Trigger: TTGGCACCCAGGATGGCATCATGGCTGTGTGGGACA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGCTGCTCCTTGTGGCTaGCCTCCACACAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLAAPCG*PPHRQL
Trigger: GAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTRRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: HSIQQEHERLEVSARDSVGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp GTCATCCATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: VIHSIQQEHERLEVSARDGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...GTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATGGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCAGCCTCCTGAGTAACTaGGATTACAGGCACTCACCA +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSSLLSN*DYRHSP
Trigger: TGGTGAGTGCCTGTAATCTCAGTTACTCAGGAGGCT...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGCCTCCTGAGTAACTaGGATTACAGGCACTCACCA +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSLLSN*DYRHSP
Trigger: TGGTGAGTGCCTGTAATCTCAGTTACTCAGGAGGCT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCCTGACTCAGCCTCCTaGGTAACTGAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIPDSAS*VTEITG
Trigger: GCCTGTAATCTCAGTTACTCAGGAGGCTGAGTCAGG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTATATCTTGGCATCCGTaGGCCTGGTTGGAATGCCGG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTISWHP*AWLECR
Trigger: CCGGCATTCCAACCAGGCTCACGGATGCCAAGATAT...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTCAAACATCAAGCCGTaGCTCTGGCAGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYISNIKP*LWQKVW
Trigger: CCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGCCCTCACCACAAACTaGTCACCCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEALTTN*SPSSFR
Trigger: CCTGAAGGAGCTGGGTGAGCAGTTTGTGGTGAGGGC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACACGGTCACTGTCTTGTaGCCCAGCAGCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHTVTVL*PSSLGI
Trigger: GATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAACACCTGGAAGCAGATaGTCTTCAGCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKTPGSR*SSAGHG
Trigger: CCCGTGGCCTGCTGAAGAGCATCTGCTTCCAGGTGT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFSRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTCCAGGAGCACCCGCTaGAAGGTGTCCAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNSRSTR*KVSKTP
Trigger: GGGGGTTTTGGACACCTTGCAGCGGGTGCTCCTGGA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCGTCCTCCTTGCAGCTaGCAGCAGGAGTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTRPPCS*QQELDH
Trigger: ATGATCCAACTCCTGCTGGCAGCTGCAAGGAGGACG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGCTCAGCGTCCTCCTTaGAGCTGCCAGCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNAQRPP*SCQQEL
Trigger: CAACTCCTGCTGGCAGCTGCAAGGAGGACGCTGAGC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCAGAGCAAATCTGTGTaGACCGGGCTCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHQSKSV*TGLSVL
Trigger: GAGGACGCTGAGCCCGGTGCACACAGATTTGCTCTG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTCGGCCAGGACGCCATaGCTCTTGGCTCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFSARTP*LLALSD
Trigger: ATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCGA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCAATGCCCCCAGAGATaGCCCGGCAGGAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNQCPQR*PGRKSS
Trigger: GCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCTCCTCCACACCCCATaGCATGGCGGTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHLLHTP*HGGDAF
Trigger: AAAGGCATCACCGCCATGGCATGGGGTGTGGAGGAG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCAGCATGTGGATCACATaGTGCTCTTCCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSMWIT*CSSMSH
Trigger: GTGGGACATGGAAGAGCAGCATGTGATCCACATGCT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGVTSFP*FWTETA
Trigger: TGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTAC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLAVQKW*RHPGPM
Trigger: CATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGTTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLLFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLNRSLR*SATSRH
Trigger: GTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTATGCATATCACGTCCTaGCTGGAATTCAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLMHITS*LEFRGN
Trigger: GTTCCCCCTGAATTCCAGGCAGGACGTGATATGCAT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATGCATATCACGTCCTaGCTGGAATTCAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSMHITS*LEFRGN
Trigger: GTTCCCCCTGAATTCCAGGCAGGACGTGATATGCAT...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCCTCGGGAGGGGGAATaGATATCACGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFPREGE*ISRPAW
Trigger: CCAGGCAGGACGTGATATGCATTCCCCCTCCCGAGG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPGHAVD*FPGLGR
Trigger: CCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCC...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAGPHWS*CRPRGS
Trigger: ACTACCGCGTGGTCTACAGCATGACCAATGGGGACC...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATTCCACTTGCGTGCCTaGAGGTCCCAGAGACACAGC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKFHLRA*RSQRHS
Trigger: GCTGTGTCTCTGGGACCTGCAGGCACGCAAGTGGAA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: EAELARVPLANIFTHLTSTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...AGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTSVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELRTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTCACCTTAGAAGCTGCTaGCCAATACATCCAAGCATA +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTHLRSC*PIHPSI
Trigger: TATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTG...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCACCTTAGAAGCTGCTaGCCAATACATCCAAGCATA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMHLRSC*PIHPSI
Trigger: TATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCACATTGGACCCCTCTaGAGTAAGAACTCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSHIGPL*SKNSCS
Trigger: GCTACACGAGTTCTTACTGCAGAGGGGTCCAATGTG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCTGGTAAGGCTGGCGTaGCTGGCACATAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHLVRLA*LAHSRC
Trigger: GCACCTACTATGTGCCAGGCACGCCAGCCTTACCAG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR GCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCTGGTAAGGCTGGCGTaGCTGGCACATAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPLVRLA*LAHSRC
Trigger: GCACCTACTATGTGCCAGGCACGCCAGCCTTACCAG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAATCAAGCCGTGCCTCTaGCAGAAGGTCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAIKPCL*QKVWHF
Trigger: GAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTGAT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLPSRVL*SSGQWL
Trigger: AAGCCACTGACCACTTGACCACAGAACTCTGCTTGG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSPSRVL*SSGQWL
Trigger: AAGCCACTGACCACTTGACCACAGAACTCTGCTTGG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACCTGCAGGACGTAGGTaGGAGGAAACGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAPAGRR*EETHSR
Trigger: ACGAGAATGCGTTTCCTCCCACCTACGTCCTGCAGG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGGTCTTGAGGACCCCTaGGTGCATGTCAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLGLEDP*VHVSDV
Trigger: CACATCACTGACATGCACCCAGGGGTCCTCAAGACC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYICLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTGTCTTTCCAATGCCTaGGGGCCCAAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCCLSNA*GPKEYQ
Trigger: CTGGTACTCTTTGGGCCCCCAGGCATTGGAAAGACA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGTGCCCCAGCAGCCTTaGCATCTGCTCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNVPQQP*HLLSQL
Trigger: AAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCAC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGGAACCCTCCGAGCATaGCGGACAGAGTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNGTLRA*RTESRS
Trigger: TGACCTGGACTCTGTCCGCCATGCTCGGAGGGTTCC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGISFLVP*LQVPEK
Trigger: CTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLVLDVR*RRNGVW
Trigger: CCAGACTCCATTTCTTCGCCACCTCACATCCAGCAC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLNWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLCPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTATATCACGTCCTGCCTaGAATTCAGGGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLISRPA*NSGGTQ
Trigger: TTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATAT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATGTTGTCATAGGCGATaGCCAGGCGGTCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQECCHRR*PGGPRT
Trigger: AGTGCGAGGACCGCCTGGCCATCGCCTATGACAACA...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHGSPSE*PRWRGS
Trigger: AGACCCTCTCCAGCGTGGCCATTCTGACGGACTACC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGGTAGTCCGTCAGAATaGCCACGCTGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKGSPSE*PRWRGS
Trigger: AGACCCTCTCCAGCGTGGCCATTCTGACGGACTACC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCCAAGGGAAACGCTTTaGAAGTTGCACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGPRETL*KLHTRK
Trigger: TTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKATRLL*VSKGNA
Trigger: AGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGCAACTCGGCTCCTGTaGGTCTCCAAGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHATRLL*VSKGNA
Trigger: AGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCACCAGCTGCTCCTTGTaGCTGACCTCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPTSCSL*LTSTQA
Trigger: TGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGT...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAATTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: ARETRSFCKRQCGGGYGKFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...TTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATAAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 4 (lower is better)
Translates to: CFWTETAQVGVSSLMLDINCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTNCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTGCTCTTGAACACCTaGCCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHLLLNT*PQVIHP
Trigger: CGGGTGGATCACTTGAGGCCAGGTGTTCAAGAGCAG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTCTGAGGCTGTGGAGATaGACACAGGCATTTAAAATC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTLRLWR*TQAFKI
Trigger: GATTTTAAATGCCTGTGTCCATCTCCACAGCCTCAG...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTTCTCACTGAGGCTGTaGAGATGGACACAGGCATTT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGFSLRL*RWTQAF
Trigger: AAATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp TGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCTTTCTCAACAAAAGCTaGCCCTATGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WRGSLWQIFSHTSPLLCVFLNKS*PYGCFP
Trigger: TGGAAAACATCCATAGGGCCAGCTTTTGTTGAGAAA...GACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGTGGTCAGTTTCTTGTaGGTCTCCAGAGGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQVVSFL*VSRGES
Trigger: GGACTCCCCTCTGGAGACCCACAAGAAACTGACCAC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACAATTTAGACTCCTCTaGGGAAATAGGTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKQFRLL*GNRLER
Trigger: CCTCTCTAACCTATTTCCCCAGAGGAGTCTAAATTG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524140.7
3UTR CAA 72 bp TATAATAATTGGTTTAGGGCTAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGGCTAGGACTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: YNNWFRARRMGQ*GPVELRLGLLG
Trigger: TCCCAACAGTCCTAGCCTCAACTCTACTGGTCCCAATTGGCCCATACGCCTAGCCCTAAACCAATTATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp GTACACATACTTGTCATCCTTGGAGAAGCAAGCACATaGGACCCCTCTGCAGTAAGAACTCGTGTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VHILVILGEAST*DPSAVRTRVAH
Trigger: ATGAGCTACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGACAAGTATGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
3UTR CAA 72 bp AGTATAGAGCGATCCTTTAAGCCCACGTACACATACTaGTCATCCTTGGAGAAGCAAGCACATTGGACCCCT +
Preference number: 4 (lower is better)
Translates to: SIERSFKPTYTY*SSLEKQAHWTP
Trigger: AGGGGTCCAATGTGCTTGCTTCTCCAAGGATGACAAGTATGTGTACGTGGGCTTAAAGGATCGCTCTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCGCAGAAGGTCTGAATaGCCTCCGAGCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPRRRSE*PPSSAK
Trigger: TTTGGCAGAGCTCGGAGGTCATTCAGACCTTCTGCG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAACACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAACACCAGTGCTGGATGTaGGGTGGCGAAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEHQCWM*GGEEME
Trigger: CTCCATTTCTTCGCCACCTCACATCCAGCACTGGTG...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTCCTTGCTTCTGGACTaGGACGGCACAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPSLLLD*DGTGRC
Trigger: ACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCAACCTCCAGACACCTaGTCTCACTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPQPPDT*SHWRCP
Trigger: TGGACACCTCCAGTGAGATCAGGTGTCTGGAGGTTG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGTCAGGGACATGCAGTTaGTTGCTTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLSGTCS*LLSGPR
Trigger: CCGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGA...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCATTGGGTAAGCCCTTaGTTCACAGAGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIHWVSP*FTEKQW
Trigger: CCACTGCTTCTCTGTGAATCAAGGGCTTACCCAATG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR TCA 90 bp ATCTTGTTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCCCTTTATTAGTGGCATaGGAACAGACTAATACGGCC +
Preference number: 4 (lower is better)
Translates to: ILFLAFCQVPNSDFVFVPPLLVA*EQTNTA
Trigger: GGCCGTATTAGTCTGTTCTCATGCCACTAATAAAGG...GGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAAGAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATCAAACATCAAGCCGTaGCTCTGGCAGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQSNIKP*LWQKVW
Trigger: CCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCATGACCTCCGAGCTCTaGCAAAGGTGGTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFMTSEL*QRWWRI
Trigger: GATCCGCCACCACCTTTGGCAGAGCTCGGAGGTCAT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACAGCAGCCTTGGCATCTaGTCAGCCAGCTTGCACATC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHSSLGI*SASLHI
Trigger: GATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCACCAGCACAGGGTGTaGGCACAACTGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNHQHRV*AQLEPA
Trigger: AGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAGGCCAGCACGGCCATaGACATCCAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFRPARP*TSKDQR
Trigger: CCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHNRSLR*SATSRH
Trigger: GTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGGACATGCAGTTGATTaGTTTCCGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFGHAVD*FPGLGR
Trigger: CCTCCCGAGGCCCGGAAAGCAATCAACTGCATGTCC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGGTCCCCATTGGTCATaGTGTAGACCACGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKGPHWS*CRPRGS
Trigger: ACTACCGCGTGGTCTACAGCATGACCAATGGGGACC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLKRFGS*TLVKKE
Trigger: CTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELKRFGS*TLVKKE
Trigger: CTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTCTCGAATTTCCACTTaGGTGCCTGCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHSRIST*VPAGPR
Trigger: TCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATAACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: CFWTETAQVGVSSLMLDITRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATCTGTCTCTCCCTGCTaGTCACCCAGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQESVSPC*SPRCME
Trigger: TTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGA...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGTCTCTGTCTCTCCCTaGTGCTCACCCAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLVSVSP*CSPRCM
Trigger: CATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: EAELARVPLANIFTHLTSLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...AGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QHIGHHVANLGVASLRMKLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: HSIQQEHERLEVSARDSVFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAATCAAGCCGTGCCTCTaGCAGAAGGTCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEIKPCL*QKVWHF
Trigger: GAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTGAT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGTGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLWSSGQ*LQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCA...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTTGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGWSSGQ*LQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCA...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLQKLAL*MFSNTG
Trigger: ACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGAGGGCAACAAAAGCTaGCCCTATGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSEGNKS*PYGCFP
Trigger: TGGAAAACATCCATAGGGCCAGCTTTTGTTGCCCTC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLCLWRS*ISLRKT
Trigger: CGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCCTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGCTGCCAGCAGGAGTTaGATCATCTGCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFAASRS*IICWPW
Trigger: CCAAGGCCAGCAGATGATCCAACTCCTGCTGGCAGC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGGACGCCATGCCTCTTaGCTCTCTCGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNGRHAS*LSRILT
Trigger: TGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCAGCTTCTTGGTACCCTaGCTCCAGGTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPSFLVP*LQVPEK
Trigger: CTTCTCAGGGACCTGGAGCCAGGGTACCAAGAAGCT...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTCGGTCCAAGTTCAGTaGTTTCCCCACAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTSVQVQ*FPHKWQ
Trigger: CTGCCACTTGTGGGGAAACCACTGAACTTGGACCGA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGTGCTGGATGTGAGGTaGCGAAGAAATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAVLDVR*RRNGVW
Trigger: CCAGACTCCATTTCTTCGCCACCTCACATCCAGCAC...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCAGCTCTGGGCCTGTTaGCATAGCTGTCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLQLWAC*HSCPTS
Trigger: ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLNWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSCPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACATATCACGTCCTGCCTaGAATTCAGGGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHISRPA*NSGGTQ
Trigger: TTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATAT...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCATATCACGTCCTGCCTaGAATTCAGGGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLISRPA*NSGGTQ
Trigger: TTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATAT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGC +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTERGPH*SCCRPR
Trigger: GCGTGGTCTACAGCATGACCAATGGGGACCTCTTTC...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQERGPH*SCCRPR
Trigger: GCGTGGTCTACAGCATGACCAATGGGGACCTCTTTC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCCAAGGGAAACGCTTTaGAAGTTGCACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGPRETL*KLHTRK
Trigger: TTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIRSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLNCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 4 (lower is better)
Translates to: LARVPLANIFTHLTSPVCFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...ACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 4 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCTTCACAATTTAATTaGGCTCTTCAGTTAAATCAG +
Preference number: 4 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPSQFN*ALQLNQ
Trigger: CTGATTTAACTGAAGAGCCCAATTAAATTGTGAAGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAACAGCTGAGCAGGACTaGGCTTCCCCAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKTAEQD*ASPVRT
Trigger: TGTCCTTACTGGGGAAGCCCAGTCCTGCTCAGCTGT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCATTCACTTCAGCGCCTaGCCACGCTCCCTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPIHFSA*PRSLGY
Trigger: GTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAAT...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCATCCGTGAGCCTGGTTaGAATGCCGGCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFIREPG*NAGSSI
Trigger: GATGGAGGAGCCGGCATTCCAACCAGGCTCACGGAT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp AGTAATCTCTTCTATTCTCAGTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTAGAGCTCTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: SNLFYSQSQWWT*DQSSRLELCIL
Trigger: GAGAATGCAGAGCTCTAATCGGCTAGACTGATCCAATGTCCACCACTGGGACTGAGAATAGAAGAGATTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGTTTGCAACCGTATGTaGGAACCACAGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLVCNRM*EPQRLR
Trigger: CCGCAGCCTCTGTGGTTCTCACATACGGTTGCAAAC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGACAGACTCCACACCTaGATGAGCGCATCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNDRLHT*MSASRD
Trigger: GTCCCTTGATGCGCTCATTCAGGTGTGGAGTCTGTC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCCAGACCTTGAAAGATaGGGACTGTGGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPPDLER*GLWGSR
Trigger: TCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAAAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: ARETRSFCKRQCGGGYGKRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...TTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGACTGAAATTGGAGTaGGGTCTAACAGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLRLKLE*GLTGMG
Trigger: TCCCATTCCTGTTAGACCTCACTCCAATTTCAGTCT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGICQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR TCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTAGCCTCCTGAGTAACTaGGATTACAGGCACTCACCA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTSLLSN*DYRHSP
Trigger: TGGTGAGTGCCTGTAATCTCAGTTACTCAGGAGGCT...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAACCTGACTCAGCCTCCTaGGTAACTGAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKPDSAS*VTEITG
Trigger: GCCTGTAATCTCAGTTACTCAGGAGGCTGAGTCAGG...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCATTGGGTAAGCCCTTaGTTCACAGAGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIHWVSP*FTEKQW
Trigger: CCACTGCTTCTCTGTGAATCAAGGGCTTACCCAATG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCACAATCAATTCTCACTaGGGCTGTGGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYITINSH*GCGDGH
Trigger: GTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGGGCTGTCTTTCCAATaGCTGGGGGCCCAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFGLSFQ*LGAQRV
Trigger: TACTCTTTGGGCCCCCAGGCATTGGAAAGACAGCCC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAGGAGTTGGATCATCTaGTGGCCTTGGTTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHRSWII*WPWFPE
Trigger: TTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAAGGAGTTGGATCATCTaGTGGCCTTGGTTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKARSWII*WPWFPE
Trigger: TTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAAGCATGTGGATCACATaGTGCTCTTCCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKASMWIT*CSSMSH
Trigger: GTGGGACATGGAAGAGCAGCATGTGATCCACATGCT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTCTCGAATTTCCACTTaGGTGCCTGCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPSRIST*VPAGPR
Trigger: TCTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 4 (lower is better)
Translates to: AFIETLSGIPRRGEGIATNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCACCTTAGAAGCTGCTaGCCAATACATCCAAGCATA +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSHLRSC*PIHPSI
Trigger: TATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTCACCTTAGAAGCTGCTaGCCAATACATCCAAGCATA +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLHLRSC*PIHPSI
Trigger: TATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTG...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCACCTTAGAAGCTGCTaGCCAATACATCCAAGCATA +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSHLRSC*PIHPSI
Trigger: TATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGCAACACCTTAGAAGCTaGTGCCCAATACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLQHLRS*CPIHPS
Trigger: GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTG...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTCACTCATGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNSLMLE*SGAISA
Trigger: AGCCGAGATCGCACCACTGCACTCCAGCATGAGTGA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAACAGGGCTTCCCTCTCTaGATCCATATCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKQGFPL*IHILAS
Trigger: GGATGCCAAGATATGGATGCAGAGAGGGAAGCCCTG...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTTATGGGTCTCTCCTTaGCCAATTCTCCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYILWVSP*PILPAT
Trigger: AGTTGCTGGGAGAATTGGGCAAGGAGAGACCCATAA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524140.7
CDS-3UTR CCA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACTGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHWSSGQ*LQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCA...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSSVVK*SVASMF
Trigger: GAACATTGAAGCCACTGACCACTTGACCACAGAACT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTPSRVL*SSGQWL
Trigger: AAGCCACTGACCACTTGACCACAGAACTCTGCTTGG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQPSRVL*SSGQWL
Trigger: AAGCCACTGACCACTTGACCACAGAACTCTGCTTGG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSCLWRS*ISLRKT
Trigger: CGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSCLWRS*ISLRKT
Trigger: CGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGGTCTTGAGGACCCCTaGGTGCATGTCAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFGLEDP*VHVSDV
Trigger: CACATCACTGACATGCACCCAGGGGTCCTCAAGACC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCGTGAGTCTTGTTCTTaGGGTTCACCAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLRESCS*GSPSRG
Trigger: GCCGCGACTTGGTGAACCCCAAGAACAAGACTCACG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGAAAACTGGACCACCCTaGTGTGGGCGTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLKTGPP*CGRPEP
Trigger: AGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAGGGTATGGAAAAACTaGACCACCCTGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFRVWKN*TTLVWA
Trigger: CGCCCACACCAGGGTGGTCCAGTTTTTCCATACCCT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHSWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCACACTCTGGGAGGCTaGCCCAGAGCAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLHTLGG*PRANLC
Trigger: ACACAGATTTGCTCTGGGCCAGCCTCCCAGAGTGTG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIRRNGV*PAVLCT
Trigger: TGTACACAGAACTGCTGGCCAGACTCCATTTCTTCG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQENWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCAATTTTTGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: FLAFCQVPNSDFVFVPNFWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...AAAATTGGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTGTAAAAGGTGTATCTTaGCCCATCGATGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTVKGVS*PIDDRA
Trigger: TGCCCGGTCATCGATGGGCCAAGATACACCTTTTAC...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGAAAGAGGTCCCCATTaGTCATGCTGTAGACCACGC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHERGPH*SCCRPR
Trigger: GCGTGGTCTACAGCATGACCAATGGGGACCTCTTTC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCCAAGGGAAACGCTTTaGAAGTTGCACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSPRETL*KLHTRK
Trigger: TTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ATCTTGTTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: ILFLAFCQVPNSDFVFVPFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...GGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACGTTCCCCCTTCATCTaGTACCAGAACTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKARSPFI*YQNSSL
Trigger: CAAACTGGAGTTCTGGTACCAGATGAAGGGGGAACG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTTCTCACTGAGGCTGTaGAGATGGACACAGGCATTT +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCFSLRL*RWTQAF
Trigger: AAATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGAAGTTTTCCCGTAGCTaGGCTCCACAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLKFSRS*APQTDH
Trigger: GTGGTCAGTCTGTGGAGCTCAGCTACGGGAAAACTT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAAGGGTCCCCTGTTCTaGCAGACTCCACACCTGAAT +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFKGPLF*QTPHLN
Trigger: ATTCAGGTGTGGAGTCTGTCAGAACAGGGGACCCTT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTGTGGTCCACATCAGTaGTTTGCTGTATCTCACATT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLCGPHQ*FAVSHI
Trigger: AATGTGAGATACAGCAAATCACTGATGTGGACCACA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTGCCAGCGTGAGTCCTaGAGTCAGCTCATTAACCAA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPCQRES*SQLINQ
Trigger: TTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAACAATCAATTCTCACTaGGGCTGTGGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKATINSH*GCGDGH
Trigger: GTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTCTGCTCAGCCAGCTTaGACATCAGGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNSAQPA*TSGLSF
Trigger: GAAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGAGACTCGAAGTTTCTaGAAGAGACAGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQETRSF*KRQCGG
Trigger: TCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAAGGAAATCCAGCTCATaGTGCCCAGAACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKRKSSS*CPEPPV
Trigger: AACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACAGCATGTGGATCACATaGTGCTCTTCCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHSMWIT*CSSMSH
Trigger: GTGGGACATGGAAGAGCAGCATGTGATCCACATGCT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAAGCATGTGGATCACATaGTGCTCTTCCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKSMWIT*CSSMSH
Trigger: GTGGGACATGGAAGAGCAGCATGTGATCCACATGCT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHVTSFP*FWTETA
Trigger: TGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTAC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQLFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAATAGGAGCTTGCGCTaGTCAGCAACCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFNRSLR*SATSRH
Trigger: GTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACATGCATATCACGTCCTaGCTGGAATTCAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHMHITS*LEFRGN
Trigger: GTTCCCCCTGAATTCCAGGCAGGACGTGATATGCAT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCCTAGACACAATCTCTaGCTTCCACATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIPRHNL*LPHVQS
Trigger: AGACTGGACATGTGGAAGGCAGAGATTGTGTCTAGG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 4 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLRTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCAACACCTTAGAAGCTaGTGCCCAATACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIQHLRS*CPIHPS
Trigger: GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCAGGGCTTCCCTCTCTaGATCCATATCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNQGFPL*IHILAS
Trigger: GGATGCCAAGATATGGATGCAGAGAGGGAAGCCCTG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSSVVK*SVASMF
Trigger: GAACATTGAAGCCACTGACCACTTGACCACAGAACT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGT +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQQKLAL*MFSNTG
Trigger: ACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGT +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLQKLAL*MFSNTG
Trigger: ACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGGACAGAAGTTAAGGTaGCCTCCTCTGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNGQKLR*PPLVHR
Trigger: CCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGTGTGGAGGAGGGTATaGAAAAACTGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNVWRRV*KNWTTL
Trigger: CAGGGTGGTCCAGTTTTTCCATACCCTCCTCCACAC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGATCATCTGCTGGCCTTaGTTTCCGGAAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLIICWP*FPERGF
Trigger: GAAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGAT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTCGGTCCAAGTTCAGTaGTTTCCCCACAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNSVQVQ*FPHKWQ
Trigger: CTGCCACTTGTGGGGAAACCACTGAACTTGGACCGA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTRRNGV*PAVLCT
Trigger: TGTACACAGAACTGCTGGCCAGACTCCATTTCTTCG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQRRNGV*PAVLCT
Trigger: TGTACACAGAACTGCTGGCCAGACTCCATTTCTTCG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGAGGTGGCGAAGAAATaGAGTCTGGCCAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFEVAKK*SLASSS
Trigger: AGAACTGCTGGCCAGACTCCATTTCTTCGCCACCTC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTGGAACCAGCTCTaGGCCTGTTGGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFNWNQL*ACWHSC
Trigger: ACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCCTTTGAAGCAGAGTTaGCGAGGGTCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFPLKQS*RGSLWQ
Trigger: TTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHSFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCAGCTTTCCTTGCTTCTaGACTGAGACGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPSFPCF*TETAQV
Trigger: TACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCT...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATATATCACGTCCTGCCTaGAATTCAGGGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHISRPA*NSGGTQ
Trigger: TTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATAT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGTAAAAGGTGTATCTTaGCCCATCGATGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEVKGVS*PIDDRA
Trigger: TGCCCGGTCATCGATGGGCCAAGATACACCTTTTAC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCCAAGGGAAACGCTTTaGAAGTTGCACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCPRETL*KLHTRK
Trigger: TTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACTGTTTACCACAGCATaGACAAACTGGACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQLFTTA*TNWTVS
Trigger: GCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCTGTTTACCACAGCATaGACAAACTGGACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLLFTTA*TNWTVS
Trigger: GCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGAAGCCACTGGTGGTTaGGATGATTCTGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAEATGG*DDSVYH
Trigger: GTGGTAAACAGAATCATCCCAACCACCAGTGGCTTC...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGTTTCTCAACAAAAGCTaGCCCTATGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLFLNKS*PYGCFP
Trigger: TGGAAAACATCCATAGGGCCAGCTTTTGTTGAGAAA...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTATGAGGGCCTGGCCATaGTACTTTTCTTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGMRAWP*YFSLLF
Trigger: AAAAAGTAAAGAAAAGTACCATGGCCAGGCCCTCAT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438489.6
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGACAGCATGGACAAACTaGACTGTCAGCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLTAWTN*TVSRVP
Trigger: TGGCACCCTGCTGACAGTCCAGTTTGTCCATGCTGT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR CCA 90 bp TTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCAATTTTGGACCAGAGGTTGACTaGTTTGGCATTTGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FLAFCQVPNSDFVFVPNFGPEVD*FGICKK
Trigger: TTTCTTGCAAATGCCAAACCAGTCAACCTCTGGTCC...AAAATTGGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518676.5
3UTR CAA 72 bp GGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTaGCTTTTATTGAGACTCTATCAGGAATTCCACGGA +
Preference number: 4 (lower is better)
Translates to: GSCSAQKPLFLR*LLLRLYQEFHG
Trigger: TCCGTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
3UTR CAA 72 bp GTTGACTGGTTTGGCATTTGCAAGAAATGCAGACTGTaGCATTTTTGCCAACAGGGGATGGATATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: VDWFGICKKCRL*HFCQQGMDILN
Trigger: GTTCAGAATATCCATCCCCTGTTGGCAAAAATGCAACAGTCTGCATTTCTTGCAAATGCCAAACCAGTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKICCFP*SFPVAE
Trigger: CTCAGCTACGGGAAAACTTCAGGGGAAGCAACATAT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCTCTCTGCCTGGATTTaGCCATCCACATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNLSAWI*PSTLPS
Trigger: AGAAGGCAATGTGGATGGTCAAATCCAGGCAGAGAG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGTTTTACTGCCAGCGTaGGTCCTGAAGTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFVLLPA*VLKSAH
Trigger: ATGAGCTGACTTCAGGACTCACGCTGGCAGTAAAAC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACAGCCTCCTGAGTAACTaGGATTACAGGCACTCACCA +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNSLLSN*DYRHSP
Trigger: TGGTGAGTGCCTGTAATCTCAGTTACTCAGGAGGCT...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAGGAGTTGGATCATCTaGTGGCCTTGGTTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFRSWII*WPWFPE
Trigger: TTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGAGGAGTTGGATCATCTaGTGGCCTTGGTTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLRSWII*WPWFPE
Trigger: TTCCGGAAACCAAGGCCAGCAGATGATCCAACTCCT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACATGTGGATCACATGCTaGTCTTCCATGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHMWITC*SSMSHT
Trigger: TGTGTGGGACATGGAAGAGCAGCATGTGATCCACAT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPVTSFP*FWTETA
Trigger: TGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTAC...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKVTSFP*FWTETA
Trigger: TGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTAC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTTGTTCCTCGCCTTCTaGCAAGTCCCAAATAGTGAC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHLFLAF*QVPNSD
Trigger: GTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLKRFGS*TLVKKE
Trigger: CTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 4 (lower is better)
Translates to: SGFLALLITTGSTDSSGLNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPQKLAL*MFSNTG
Trigger: ACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGAGGGCAACAAAAGCTaGCCCTATGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEEGNKS*PYGCFP
Trigger: TGGAAAACATCCATAGGGCCAGCTTTTGTTGCCCTC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGAGGGCAACAAAAGCTaGCCCTATGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHEGNKS*PYGCFP
Trigger: TGGAAAACATCCATAGGGCCAGCTTTTGTTGCCCTC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTGTTTGTGGAGGTCTTaGATCTCTCTAAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTCLWRS*ISLRKT
Trigger: CGTCTTCCTTAGAGAGATCCAAGACCTCCACAAACA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACAGTTGGATCATCTGCTaGCCTTGGTTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNSWIIC*PWFPER
Trigger: CCTTTCCGGAAACCAAGGCCAGCAGATGATCCAACT...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCGAAGAAATGGAGTCTaGCCAGCAGTTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPRRNGV*PAVLCT
Trigger: TGTACACAGAACTGCTGGCCAGACTCCATTTCTTCG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTGTCCAGTTAGCATGTaGATCACATGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHCPVSM*ITCCSS
Trigger: GGAAGAGCAGCATGTGATCCACATGCTAACTGGACA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATGGCGAGGGTCCCTTTaGCAAATATTTTCACACACC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKWRGSL*QIFSHT
Trigger: GGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAATATCACGTCCTGCCTaGAATTCAGGGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEISRPA*NSGGTQ
Trigger: TTGTGTTCCCCCTGAATTCCAGGCAGGACGTGATAT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGTAAAAGGTGTATCTTaGCCCATCGATGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLVKGVS*PIDDRA
Trigger: TGCCCGGTCATCGATGGGCCAAGATACACCTTTTAC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCATACTTGTCATCCTTaGAGAAGCAAGCACATTGGA +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCHTCHP*RSKHIG
Trigger: TCCAATGTGCTTGCTTCTCCAAGGATGACAAGTATG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGCCTCCCCAGCCATGTaGAATTGTGAGTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEASPAM*NCESIK
Trigger: TTTAATGGACTCACAATTCCACATGGCTGGGGAGGC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGTCTTAGGTATTTTATaGGTCTCTCCTTGCCCAATT +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLVLGIL*VSPCPI
Trigger: AATTGGGCAAGGAGAGACCCATAAAATACCTAAGAC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524140.7
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCCAGATTCCAAGCATTaGTCTTTGAGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNPDSKH*SLSQML
Trigger: CAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLICCFP*SFPVAE
Trigger: CTCAGCTACGGGAAAACTTCAGGGGAAGCAACATAT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCATATGTTGCTTCCCCTaGAGTTTTCCCGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFICCFP*SFPVAE
Trigger: CTCAGCTACGGGAAAACTTCAGGGGAAGCAACATAT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAGAAGAGACAAGGTCTaGAGCCATAATCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQERRDKV*SHNLKP
Trigger: TGGCTTCAGATTATGGCTTCAGACCTTGTCTCTTCT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAACAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCGTGATGAGGATCAGATaGCAGCACCTACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPVMRIR*QHLQLY
Trigger: ATAAAGCTGTAGGTGCTGTCATCTGATCCTCATCAC...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGCCCTCCCTAAAGTATaGGTTGTGATGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFALPKV*VVMRIR
Trigger: TCTGATCCTCATCACAACTCATACTTTAGGGAGGGC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCAATTTTATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FLAFCQVPNSDFVFVPNFIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...AAAATTGGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR GCA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: NCEVLWSTSVICCISHSSFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCAATTTTTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: FLAFCQVPNSDFVFVPNFSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...AAAATTGGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR GCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQRTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCAACACCTTAGAAGCTaGTGCCCAATACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFQHLRS*CPIHPS
Trigger: GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: STSVICCISHSSVPPSSGTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHWSSGQ*LQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKSSVVK*SVASMF
Trigger: GAACATTGAAGCCACTGACCACTTGACCACAGAACT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTSRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCTGCAAGAGACAGTGTaGAGGAGGGTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFLQETV*RRVWKN
Trigger: GTTTTTCCATACCCTCCTCCACACTGTCTCTTGCAG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGTGGTTTCCCCACAAGTaGCAGAGTGATGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLWFPHK*QSDELL
Trigger: AAGAAGCTCATCACTCTGCCACTTGTGGGGAAACCA...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGCAATCTGTCCCCTTTaGAGGAAACCAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFAICPL*RKPKRW
Trigger: CCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGAACCTCACAGCATCTaGAAGCTTCTCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNEPHSI*KLLQQS
Trigger: AGATTGCTGGAGAAGCTTCCAGATGCTGTGAGGTTC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCTGTTTACCACAGCATaGACAAACTGGACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNLFTTA*TNWTVS
Trigger: GCTGACAGTCCAGTTTGTCCATGCTGTGGTAAACAG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACTTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATTGGTTTCATTTCCCTaGGCACTTTCTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKLVSFP*ALSDSK
Trigger: CTTGGAGTCAGAAAGTGCCCAGGGAAATGAAACCAA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAACTGTGAGGTTCTGTaGTCCACATCAGTGATTTGC +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQENCEVL*STSVIC
Trigger: GCAAATCACTGATGTGGACCACAGAACCTCACAGTT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTTTATCCCAAAAGTTTaGGAGCCAAGGAATAGAGAG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCFIPKV*EPRNRE
Trigger: CTCTCTATTCCTTGGCTCCCAAACTTTTGGGATAAA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGCCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCTGAGGCTGTGGAGATaGACACAGGCATTTAAAATC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHLRLWR*TQAFKI
Trigger: GATTTTAAATGCCTGTGTCCATCTCCACAGCCTCAG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTTCTCACTGAGGCTGTaGAGATGGACACAGGCATTT +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNFSLRL*RWTQAF
Trigger: AAATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCATACTTGTCATCCTTaGAGAAGCAAGCACATTGGA +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHHTCHP*RSKHIG
Trigger: TCCAATGTGCTTGCTTCTCCAAGGATGACAAGTATG...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR TCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ENSLTVELAQGRQFKSKASSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCAGCTTTATAAACTGTaGGGTTCTGTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLQLYKL*GSVVHI
Trigger: GATGTGGACCACAGAACCTCACAGTTTATAAAGCTG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTATACACAACTTTGTGTaGCTCATCCACATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTIHNFV*LIHMKV
Trigger: AACCTTCATGTGGATGAGGCACACAAAGTTGTGTAT...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTAAACGCTTTGGAAGTTaGACACTCGTAAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTKRFGS*TLVKKE
Trigger: CTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTT...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: TYSFINCEVLWSTSVICCFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCTTTGACCATCCACATTaGCTTCTTGAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIFDHPH*LLEVLK
Trigger: CTTAAGAACTTCAAGAAGGCAATGTGGATGGTCAAA...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAACCAGAACTCCAGTTTaGATCTCAGGAGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKTRTPV*ISGVIS
Trigger: AGAGATTACTCCTGAGATGCAAACTGGAGTTCTGGT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTTCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: LSTKQSILTEAVEMDTGISTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 4 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYINQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKRTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACAGAACTACCAAAACCTaGCTTGGAAAACTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHRTTKT*LGKLVW
Trigger: CCAAACCAGTTTTCCAAGGCAGGTTTTGGTAGTTCT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: LAPWTCDLNQIITTSARLTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATCAAGGATGTGTTTGTaGAGGTCTTGGATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQESRMCL*RSWISL
Trigger: TAGAGAGATCCAAGACCTCCACAAACACATCCTTGA...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCCCAGATATAATAATTaGTTTAGGGCTAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLPRYNN*FRARRM
Trigger: CATACGCCTAGCCCTAAACCAATTATTATATCTGGG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCTGAGGCTGTGGAGATaGACACAGGCATTTAAAATC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLLRLWR*TQAFKI
Trigger: GATTTTAAATGCCTGTGTCCATCTCCACAGCCTCAG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
3UTR CAA 72 bp ATCTTAATTGGTCTCAACATCTACTTTATTTCTGCATaGGGTAAGCCCTTGATTCACAGAGAAGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: ILIGLNIYFISA*GKPLIHREAVA
Trigger: TGCCACTGCTTCTCTGTGAATCAAGGGCTTACCCAATGCAGAAATAAAGTAGATGTTGAGACCAATTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTAGAATAATGGAAAGATaGGAAGAGACAAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLRIMER*EETRSE
Trigger: TTCAGACCTTGTCTCTTCTCATCTTTCCATTATTCT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAAACAGTTTGACTGTTaGACTTGCACAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFKQFDC*TCTRQT
Trigger: TGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATCCACATCAGTGATTTaGTGTATCTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKSTSVI*CISHSS
Trigger: GGATGAATGTGAGATACAGCAAATCACTGATGTGGA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGATGGTAAATTTCTCCTaGCCAGAGAGTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLMVNFS*PESKFH
Trigger: GTGGAACTTACTCTCTGGCCAGGAGAAATTTACCAT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGTTTGCTGAAAGGCACTaGAAATTCTCTCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLFAERH*KFSRIR
Trigger: TCTGATCCGAGAGAATTTCCAGTGCCTTTCAGCAAA...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCCTGCCTTGGAAAACTaGTTTGGAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPPALEN*FGKWMN
Trigger: ATTCATCCATTTTCCAAACCAGTTTTCCAAGGCAGG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACAGCTCTCTTTTCTATTaGAATTGGAGACAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNSSLFY*NWRQQH
Trigger: ATGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCT...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR TCA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGGAATGAAAACAGTTTaGCTGTTGAACTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNGMKTV*LLNLHK
Trigger: CTTGTGCAAGTTCAACAGTCAAACTGTTTTCATTCC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCTGGATTTCTGGCTTTaGTTATTACAACTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLLDFWL*LLQLEA
Trigger: TGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 4 (lower is better)
Translates to: LKPWVQIYTSKRILFALTDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTTTGACACTAACATTTaGAGAACTACCAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPFDTNI*RTTKTC
Trigger: GCAGGTTTTGGTAGTTCTGCAAATGTTAGTGTCAAA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CCA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACCTTCACAATTTAATTaGGCTCTTCAGTTAAATCAG +
Preference number: 4 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQPSQFN*ALQLNQ
Trigger: CTGATTTAACTGAAGAGCCCAATTAAATTGTGAAGG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CCA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCCTTCACAATTTAATTaGGCTCTTCAGTTAAATCAG +
Preference number: 4 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLPSQFN*ALQLNQ
Trigger: CTGATTTAACTGAAGAGCCCAATTAAATTGTGAAGG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR GCA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 4 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGAACCAAAGACGCACATaGCAAATGCACTATAGATAT +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLNQRRT*QMHYRY
Trigger: ATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: KRILFALTRLNGANSLEPTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACACCACAGTTACTTTTTaGACCAACCTTAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHTTVTF*TNLSNL
Trigger: AAGATTACTAAGGTTGGTGCAAAAAGTAACTGTGGT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR GCA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGACGCACATGCCAAATaGACTATAGATATAAATTCA +
Preference number: 4 (lower is better)
Translates to: TSKRILFALTRLNGANSLDAHAK*TIDINS
Trigger: TGAATTTATATCTATAGTGCATTTGGCATGTGCGTC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS TCA 90 bp GGGGGCCGGCTTCACCCCGCAGAAGCCGCCGGCGGGTACTCGGGCTaGGAGGGCCCACGCTCATTGCCGCCCACCCACCAAGATGACCCT +
Preference number: 5 (lower is better)
Translates to: GGRLHPAEAAGGYSG*EGPRSLPPTHQDDP
Trigger: AGGGTCATCTTGGTGGGTGGGCGGCAATGAGCGTGGGCCCTCTCAGCCCGAGTACCCGCCGGCGGCTTCTGCGGGGTGAAGCCGGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS GCA 90 bp CAGAAGCCGCCGGCGGGTACTCGGGCTGAGAGGGCCCACGCTCATTaGCGCCCACCCACCAAGATGACCCTTCCCCTGGAAAGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: QKPPAGTRAERAHAH*RPPTKMTLPLERAW
Trigger: CCACGCCCTTTCCAGGGGAAGGGTCATCTTGGTGGGTGGGCGGCAATGAGCGTGGGCCCTCTCAGCCCGAGTACCCGCCGGCGGCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS-3UTR CAA 90 bp TGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: CGEADATKAPPRASRLTGCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...CCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: QPLRVARRGPPGGWRNPPKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...CGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 5 (lower is better)
Translates to: CGEADATKAPPRASRLTGVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...CCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GTGGGCAATGGCCAGGAGGGTGAAGCCATCCACGGGCCGCCGGGCCAAGTAGTACAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: VGNGQEGEAIHGPPGQVVQAGAE*VRGFLC
Trigger: GCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTG...TACTACTTGGCCCGGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGAGGCGGTCCTCGCACTaGCTCAGGGACATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTRRSSH*LRDMQL
Trigger: CAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCT...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS CCA 90 bp CATTGCCGCCCACCCACCAAGATGACCCTTCCCCTGGAAAGGGCGTaGGGCTCAGAGACCTCACGCCAGCAGCCAGGCAGCCTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: HCRPPTKMTLPLERA*GSETSRQQPGSLPG
Trigger: ACCAGGAAGGCTGCCTGGCTGCTGGCGTGAGGTCTCTGAGCCCCACGCCCTTTCCAGGGGAAGGGTCATCTTGGTGGGTGGGCGGCAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS-3UTR CAA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGGTGTCCAGGGAATCTaGTTCCTCGCCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: CGEADATKAPPRASRLTGGVQGI*FLAFCQ
Trigger: TTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACC...CCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGATCTCGAATTTCCACTaGCGTGCCTGCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: AAESCPEGSSRGLEESSEISNFH*RACRSQ
Trigger: CTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGAT...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGACCTAGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 5 (lower is better)
Translates to: DTAVRPVRSRNGAGTRDLVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...TAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CAAGTAGTATCCCAGATCCCGACGAAGCCGCACCCACAGCAGGGGCGGGAAGCGTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: QVVSQIPTKPHPQQGREACAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...CGCTTCCCGCCCCTGCTGTGGGTGCGGCTTCGTCGGGATCTGGGATACTACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: QQPQDGHCLVPQQPWHLLRTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...GAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: AAESCPEGSSRGLEESSESSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHRTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp CAGCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGGCATTGGGTAAGCCCTaGATTCACAGAGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: QPLRVARRGPPGGWRNPPALGKP*IHREAV
Trigger: CACTGCTTCTCTGTGAATCAAGGGCTTACCCAATGC...CGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS GCA 90 bp TCCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTaGAGGCACCCGGGACCTATGAGCATCGCTGAGATCCCAGACCTG +
Preference number: 5 (lower is better)
Translates to: SIVGHCGEAGAVQKW*RHPGPMSIAEIPDL
Trigger: CAGGTCTGGGATCTCAGCGATGCTCATAGGTCCCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549814.5
CDS CCA 90 bp TGGAATGCCGGCTCCTCCATCGCCCTCCTGGAGGACTTAAGCAAGTaGTCTCCCTCCCAGGGCATCGGCCGCATGGTCTGGATACCACAG +
Preference number: 5 (lower is better)
Translates to: WNAGSSIALLEDLSK*SPSQGIGRMVWIPQ
Trigger: CTGTGGTATCCAGACCATGCGGCCGATGCCCTGGGAGGGAGACCACTTGCTTAAGTCCTCCAGGAGGGCGATGGAGGAGCCGGCATTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 90 bp CCTGGGTCCCAGCAGGCTCCTTGGACCCGAATTCACTTCAGCGCCTaGCCACGCTCCCTTGGTTACTGCCTGCTGATGATCGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: PGSQQAPWTRIHFSA*PRSLGYCLLMIAGG
Trigger: TCCTCCTGCGATCATCAGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTGGGACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673758.1
CDS-3UTR CAA 90 bp GCTGCGGGGCCACCTTTCGGTCCAAGTTCAGTGGTTTCCCCACAAGTGGCAGAGAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: AAGPPFGPSSVVSPQVAERTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...CTCTGCCACTTGTGGGGAAACCACTGAACTTGGACCGAAAGGTGGCCCCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCTCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: CLLQAGAELVRGFLCGGGSFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...GCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp GACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: DCGEADATKAPPRASRLTVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...CGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp GCCGCTGAGAGTTGCCCGGAGGGGTCCTCCCGGGGGCTGGAGGAATCCTCCGAGAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: AAESCPEGSSRGLEESSESNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...CTCGGAGGATTCCTCCAGCCCCCGGGAGGACCCCTCCGGGCAACTCTCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CGGCCAGGACGCCATGCCTCTTGGCTCTCTCGGATCCTGACAGGTAGCGCTCACCTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: RPGRHASWLSRILTGSAHLRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...GTGAGCGCTACCTGTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGGCCAGCAGGCTCACGGGGGTAAGATGTGCCTCTTaGCTTCTCCTTTGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: CGEADATKAPPRASRLTGVRCAS*LLLCLQ
Trigger: CTGAAGGCAAAGGAGAAGCAAAGAGGCACATCTTAC...CCCCGTGAGCCTGCTGGCCCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS TCA 90 bp GTGCTCTGCAGGGCTTCCCTCTCTGCATCCATATCTTGGCATCCGTaGGCCTGGTTGGAATGCCGGCTCCTCCATCGCCCTCCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: VLCRASLSASISWHP*AWLECRLLHRPPGG
Trigger: TCCTCCAGGAGGGCGATGGAGGAGCCGGCATTCCAACCAGGCTCACGGATGCCAAGATATGGATGCAGAGAGGGAAGCCCTGCAGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS-3UTR CAA 90 bp GTCCAATCTCGGTACACATCCTGCAGGACCTCGTCGTCCAGGGACAAAACATCCGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: VQSRYTSCRTSSSRDKTSGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...GGATGTTTTGTCCCTGGACGACGAGGTCCTGCAGGATGTGTACCGAGATTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: STQATRLLWVSKGNALEVGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TGTGCGCACAACTGGAACCAGCTCTGGGCCTGTTGGCATAGCTGTCCCACCAGTTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: CAHNWNQLWACWHSCPTSCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...ACTGGTGGGACAGCTATGCCAACAGGCCCAGAGCTGGTTCCAGTTGTGCGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCCGGTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: LWDTAVRPVRSRNGAGTRSASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...CCGGGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CAGCAGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCGGTGTCCAGGGAATCTaGTTCCTCGCCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: QQPQDGHCLVPQQPWHLLGVQGI*FLAFCQ
Trigger: TTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACC...GAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCTGCGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CAGCGGGACAGGCACGGTGAAAGAGGCCCATTTCCGGGCTTCCTCAAACGCCAGGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: QRDRHGERGPFPGFLKRQAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...CTGGCGTTTGAGGAAGCCCGGAAATGGGCCTCTTTCACCGTGCCTGTCCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TGTGGCCTGGGAGGCCAGCACGGCCATGCACATCCAAGGATCAGAGGCATCTCCGGTGTCCAGGGAATCTaGTTCCTCGCCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: CGLGGQHGHAHPRIRGISGVQGI*FLAFCQ
Trigger: TTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACC...GGAGATGCCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CACGTGGGCCACGAGGAGCTGCCCGTGTGTCTGCTCCAGGCGGGTGCAGAGTTGTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: HVGHEELPVCLLQAGAELLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...CAACTCTGCACCCGCCTGGAGCAGACACACGGGCAGCTCCTCGTGGCCCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCCTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: VCSRRVQSWCVASSAVVALRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...GGCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp ACCACCAGCTGCTCCTTGTGGCTGACCTCCACACAGGCAACTCGGCTCCTGTGGAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: TTSCSLWLTSTQATRLLWRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...CCACAGGAGCCGAGTTGCCTGTGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GAATCCTCCGAGGGGCACCAGCACAGGGTGTGCGCACAACTGGAACCAGCTCTGTTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: ESSEGHQHRVCAQLEPALLTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...CAGAGCTGGTTCCAGTTGTGCGCACACCCTGTGCTGGTGCCCCTCGGAGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCCTGGCCACGCTCCCTaGGTTACTGCCTGCAACAGC +
Preference number: 5 (lower is better)
Translates to: DLPKPAARRDSSSETTRNPGHAP*VTACNS
Trigger: GCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAGG...GTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS GCA 90 bp CAAGCCGTGCCTCTGGCAGAAGGTCTGGCACTTCAGGGTAGGCAGTaGTCTGCAGGGCTTCCCTCTCTGCATCCATATCTGCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QAVPLAEGLALQGRQ*SAGLPSLHPYLQGR
Trigger: CCTTCCTTGCAGATATGGATGCAGAGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379808.7
CDS GCA 90 bp GTCTGGCACTTCAGGGTAGGCAGTGCTCTGCAGGGCTTCCCTCTCTaGATCCATATCTTGGCATCCGTGAGCCTGGTTGGAATGCCGGCT +
Preference number: 5 (lower is better)
Translates to: VWHFRVGSALQGFPL*IHILASVSLVGMPA
Trigger: AGCCGGCATTCCAACCAGGCTCACGGATGCCAAGATATGGATGCAGAGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAGTGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
ENST00000674033.1
CDS GCA 90 bp CAAGCCGTGCCTCTGGCAGAAGGTCTGGCACTTCAGGGTAGGCAGTaGTCTGCAGGGCTTCCCTCTCTGCATCCATATCTTGGCATCCGT +
Preference number: 5 (lower is better)
Translates to: QAVPLAEGLALQGRQ*SAGLPSLHPYLGIR
Trigger: ACGGATGCCAAGATATGGATGCAGAGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
ENST00000674033.1
CDS GCA 90 bp CAAGCCGTGCCTCTGGCAGAAGGTCTGGCACTTCAGGGTAGGCAGTaGTCTGCAGGGCTTCCCTCTCTGCATCCATATCTGAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: QAVPLAEGLALQGRQ*SAGLPSLHPYLRLW
Trigger: CCACAGTCTCAGATATGGATGCAGAGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CCA 90 bp CCTGGGTCCCAGCAGGCTCCTTGGACCCGAATTCACTTCAGCGCCTaGCCACGCTCCCTTGGTTACTGCCTGCAACAGCTGATATGTTTC +
Preference number: 5 (lower is better)
Translates to: PGSQQAPWTRIHFSA*PRSLGYCLQQLICF
Trigger: GAAACATATCAGCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTGGGACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS CCA 90 bp CCACAGTTTAGCTGCAGCCTGCTGATCTCACTGAGGCCCCAGTTCTaGGTCCCAGCATCTCTCCAGACCTCTCTTAGCACCTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PQFSCSLLISLRPQF*VPASLQTSLSTSSP
Trigger: TGGGGAGGAGGTGCTAAGAGAGGTCTGGAGAGATGCTGGGACCCAGAACTGGGGCCTCAGTGAGATCAGCAGGCTGCAGCTAAACTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 90 bp GACTTAAGCAAGTGGTCTCCCTCCCAGGGCATCGGCCGCATGGTCTaGATACCACAGTTTAGCTGCAGCCTGCTGATCTCACTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: DLSKWSPSQGIGRMV*IPQFSCSLLISLRP
Trigger: GGGCCTCAGTGAGATCAGCAGGCTGCAGCTAAACTGTGGTATCCAGACCATGCGGCCGATGCCCTGGGAGGGAGACCACTTGCTTAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 90 bp GGGCTTCCCTCTCTGCATCCATATCTTGGCATCCGTGAGCCTGGTTaGAATGCCGGCTCCTCCATCGCCCTCCTGGAGGACTTAAGCAAG +
Preference number: 5 (lower is better)
Translates to: GLPSLHPYLGIREPG*NAGSSIALLEDLSK
Trigger: CTTGCTTAAGTCCTCCAGGAGGGCGATGGAGGAGCCGGCATTCCAACCAGGCTCACGGATGCCAAGATATGGATGCAGAGAGGGAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS-3UTR CAA 90 bp TCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGACAGGGGCCAGCTCCAGGTCACTaGGCCTGGCAGTCAGATGGT +
Preference number: 5 (lower is better)
Translates to: SLNTSHSFSSIREGIRQGPAPGH*AWQSDG
Trigger: ACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGG...CCCCTGTCTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CAA 90 bp TTTGAGGCTGCTGAGAAGGTTCTGGGCATCAGCGTCCAGGCAGCCATCCGCGAGGGTGTCCAGGGAATCTaGTTCCTCGCCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: FEAAEKVLGISVQAAIREGVQGI*FLAFCQ
Trigger: TTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACC...CTCGCGGATGGCTGCCTGGACGCTGATGCCCAGAACCTTCTCAGCAGCCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGCTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQLRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GGCCCATCGATGACCGGGCAGGGGTCCCCGGAGGTGATGTCCAGCACCAGGACGGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: GPSMTGQGSPEVMSSTRTETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...CGTCCTGGTGCTGGACATCACCTCCGGGGACCCCTGCCCGGTCATCGATGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CACTGTCTTGTGCCCCAGCAGCCTTGGCATCTGCTCAGCCAGCTTGCACATCAGAAGGACAGAGGCCCTTaGCAGTGTCAGCGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: HCLVPQQPWHLLSQLAHQKDRGP*QCQRSG
Trigger: GCCAGAACGCTGACACTGCAAAGGGCCTCTGTCCTT...CTGATGTGCAAGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACAAGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS CCA 90 bp AGATCAACGACCTCAAACATCAAGCCGTGCCTCTGGCAGAAGGTCTaGCACTTCAGGGTAGGCAGTGCTCTGCAGGGCTTCCCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: RSTTSNIKPCLWQKV*HFRVGSALQGFPLC
Trigger: GCAGAGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGAGGTCGTTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 90 bp TTGCCAACAGGGGATGGATATTCTGAACACGTGGTCAGTTTCTTGTaGGTCTCCAGAGGGGAGTCCCTGCGGCCTCACCTGACCGGTGGT +
Preference number: 5 (lower is better)
Translates to: LPTGDGYSEHVVSFL*VSRGESLRPHLTGG
Trigger: ACCACCGGTCAGGTGAGGCCGCAGGGACTCCCCTCTGGAGACCCACAAGAAACTGACCACGTGTTCAGAATATCCATCCCCTGTTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000674033.1
CDS CCA 90 bp CAGTGCCTCTGGGGAGCTGAACCAGCTCCTCTCCACTGCTTTCCTTaGTCTGCAAGCACTCATGGAGGGATATTAGACAGTGGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: QCLWGAEPAPLHCFP*SASTHGGILDSGLP
Trigger: GGGGAGGCCACTGTCTAATATCCCTCCATGAGTGCTTGCAGACCAAGGAAAGCAGTGGAGAGGAGCTGGTTCAGCTCCCCAGAGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CCA 90 bp CCTGGGTCCCAGCAGGCTCCTTGGACCCGAATTCACTTCAGCGCCTaGCCACGCTCCCTTGGTTACTGCCAACAGCTGATATGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: PGSQQAPWTRIHFSA*PRSLGYCQQLICFY
Trigger: GTAGAAACATATCAGCTGTTGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTGGGACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS-3UTR CAA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RTSSSRDKTSFSSASERPICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTACAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVQAGAE*VRGFLC
Trigger: GCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTG...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACATCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 5 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GGTCTTCAATGCCCCCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGGAGAAGCAAGCACATaGGACCCCTCTGCAGTAAGA +
Preference number: 5 (lower is better)
Translates to: GLQCPQRCPGRKSSSCCPGEAST*DPSAVR
Trigger: TCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCC...TGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGGGGGCATTGAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CAA 90 bp TGTCTGCTCCAGGCGGGTGCAGAGTTGGTGCGTGGCTTCCTCTGCGGTGGTGGCACATACTTGTCATCCTaGGAGAAGCAAGCACATTGG +
Preference number: 5 (lower is better)
Translates to: CLLQAGAELVRGFLCGGGTYLSS*EKQAHW
Trigger: CCAATGTGCTTGCTTCTCCAAGGATGACAAGTATGT...GCCACCACCGCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTGGAGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CAA 90 bp GAGGCCCATTTCCGGGCTTCCTCAAACGCCAGCCTCAGCCGCCCTGGGTTCCCACAGACTGTTGCATTTTaGCCAACAGGGGATGGATAT +
Preference number: 5 (lower is better)
Translates to: EAHFRASSNASLSRPGFPQTVAF*PTGDGY
Trigger: ATATCCATCCCCTGTTGGCAAAAATGCAACAGTCTG...TGGGAACCCAGGGCGGCTGAGGCTGGCGTTTGAGGAAGCCCGGAAATGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS GCA 90 bp CAAGCCGTGCCTCTGGCAGAAGGTCTGGCACTTCAGGGTAGGCAGTaGTCTGCAGGGCTTCCCTCTCTGCATCCATATCAACAGCTGATA +
Preference number: 5 (lower is better)
Translates to: QAVPLAEGLALQGRQ*SAGLPSLHPYQQLI
Trigger: TATCAGCTGTTGATATGGATGCAGAGAGGGAAGCCCTGCAGAGCACTGCCTACCCTGAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549814.5
CDS CCA 90 bp CTGCTTTCCTTGGTCTGCAAGCACTCATGGAGGGATATTAGACAGTaGCCTCCCCGCCAAGACCTCTGGATGTTGGCTCCTCTAGGCACG +
Preference number: 5 (lower is better)
Translates to: LLSLVCKHSWRDIRQ*PPRQDLWMLAPLGT
Trigger: CGTGCCTAGAGGAGCCAACATCCAGAGGTCTTGGCGGGGAGGCCACTGTCTAATATCCCTCCATGAGTGCTTGCAGACCAAGGAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CCA 90 bp GGCTCCTTGGACCCGAATTCACTTCAGCGCCTGGCCACGCTCCCTTaGTTACTGCCTGCTGATGATCGCAGGAGGATAAGAGTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: GSLDPNSLQRLATLP*LLPADDRRRIRVFD
Trigger: GTCAAAGACTCTTATCCTCCTGCGATCATCAGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673758.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCAGCTCCAGGTCACTaGGCCTGGCAGTCAGATGGT +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPAPGH*AWQSDG
Trigger: ACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGGGCATCCTCAGACCCGCTGACCACCAGCTGCTCCTTGTGGCTGACCTCCACAGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: RASSDPLTTSCSLWLTSTVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...TGTGGAGGTCAGCCACAAGGAGCAGCTGGTGGTCAGCGGGTCTGAGGATGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAACAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKQAGAE*VRGFLC
Trigger: GCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTG...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CCATTGTGGGACACTGCGGTGAGGCCGGTGCGGTCCAGAAATGGTGCAGGCACCTCCAGATTCCAAGCATaGATCTTTGAGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: PLWDTAVRPVRSRNGAGTSRFQA*IFEPDA
Trigger: AGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGA...GGTGCCTGCACCATTTCTGGACCGCACCGGCCTCACCGCAGTGTCCCACAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHKEMEP*LNPVTS
Trigger: GCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTT...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp CATGATGCCATCCTGGGTGCCAATCACCAGCAGCTTCTCCTCCACACCCCATGCCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: HDAILGANHQQLLLHTPCPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...GCATGGGGTGTGGAGGAGAAGCTGCTGGTGATTGGCACCCAGGATGGCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGGACCTCGTCGTCCAGGGACAAAACATCCTTCAGCTCCGCCTCCGAGAGACCGTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 5 (lower is better)
Translates to: RTSSSRDKTSFSSASERPSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...CGGTCTCTCGGAGGCGGAGCTGAAGGATGTTTTGTCCCTGGACGACGAGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp ACGAGGCCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCCCGAGGGACCAGAGGTaGACTGGTTTGGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: TRPVNRSLRCSATSRHLIPRDQR*TGLAFA
Trigger: TGCAAATGCCAAACCAGTCAACCTCTGGTCCCTCGG...GATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS GCA 90 bp CACCACCTCCAGTGCCTCTGGGGAGCTGAACCAGCTCCTCTCCACTaGTTTCCTTGGTCTGCAAGCACTCATGGAGGGATATTAGACAGT +
Preference number: 5 (lower is better)
Translates to: HHLQCLWGAEPAPLH*FPWSASTHGGILDS
Trigger: ACTGTCTAATATCCCTCCATGAGTGCTTGCAGACCAAGGAAAGCAGTGGAGAGGAGCTGGTTCAGCTCCCCAGAGGCACTGGAGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CCA 90 bp AATTTCTGTTCCTTCTCTCGTTTTCCTGGGTCCCAGCAGGCTCCTTaGACCCGAATTCACTTCAGCGCCTGGCCACGCTCCCTTGGTTAC +
Preference number: 5 (lower is better)
Translates to: NFCSFSRFPGSQQAP*TRIHFSAWPRSLGY
Trigger: GTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTGGGACCCAGGAAAACGAGAGAAGGAACAGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATRTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AACATCCTTCAGCTCCGCCTCCGAGAGACCGTGTCGGGAAGACACAATGTAGCCTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: NILQLRLRETVSGRHNVASASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...GGCTACATTGTGTCTTCCCGACACGGTCTCTCGGAGGCGGAGCTGAAGGATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGTTGGCGAGGGTCCCTTaGGCAAATATTTTCACACAC +
Preference number: 5 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWLARVP*ANIFTH
Trigger: GTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CTGATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCTCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: LISLEVSRESCSSPSAKSSFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...GGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp CCACAAACTGCTCACCCAGCTCCTTCAGGTAGCAGGCGTGAGTCTTGTTCTTGGGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: PQTAHPAPSGSRRESCSWAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...CCAAGAACAAGACTCACGCCTGCTACCTGAAGGAGCTGGGTGAGCAGTTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: LPKPAARRDSSSETTRNLVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...GAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TTCAGCAGGCCACGGGCATCTGAGCTCATTTGTGACGTCCCCAGCAGCCGCAGGTCCAGATTCCAAGCATaGATCTTTGAGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: FSRPRASELICDVPSSRRSRFQA*IFEPDA
Trigger: AGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGA...CCTGCGGCTGCTGGGGACGTCACAAATGAGCTCAGATGCCCGTGGCCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp ACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCAAAGCCCCGCCGCGGAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: TLKDEDCGEADATKAPPRKEMEP*LNPVTS
Trigger: GCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTT...CCGCGGCGGGGCTTTGGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp TGTGGCCTGGGAGGCCAGCACGGCCATGCACATCCAAGGATCAGAGGCATCTCCATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: CGLGGQHGHAHPRIRGISIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...GGAGATGCCTCTGATCCTTGGATGTGCATGGCCGTGCTGGCCTCCCAGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCAAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGACATACTTGTCATCCTaGGAGAAGCAAGCACATTGG +
Preference number: 5 (lower is better)
Translates to: GMEKLDHPGVGVQNLGRGTYLSS*EKQAHW
Trigger: CCAATGTGCTTGCTTCTCCAAGGATGACAAGTATGT...CCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CAA 90 bp CTCATCGATCCGCGAGGGAATCAGACAGGGGCCGTACTGATCACCGATGAGGGCCCCACGTACACATACTaGTCATCCTTGGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: LIDPRGNQTGAVLITDEGPTYTY*SSLEKQ
Trigger: TTGCTTCTCCAAGGATGACAAGTATGTGTACGTGGG...GCCCTCATCGGTGATCAGTACGGCCCCTGTCTGATTCCCTCGCGGATCGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438489.6
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCAAGGACAGAGGCCCTTaGCAGTGTCAGCGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVKDRGP*QCQRSG
Trigger: GCCAGAACGCTGACACTGCAAAGGGCCTCTGTCCTT...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp GAGGCCCATTTCCGGGCTTCCTCAAACGCCAGCCTCAGCCGCCCTGGGTTCCCATGTTTCTACATGTTATaGTTTGTCTGTCCCACGAGA +
Preference number: 5 (lower is better)
Translates to: EAHFRASSNASLSRPGFPCFYML*FVCPTR
Trigger: TCTCGTGGGACAGACAAACAATAACATGTAGAAACA...TGGGAACCCAGGGCGGCTGAGGCTGGCGTTTGAGGAAGCCCGGAAATGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCACGTGGTCAGTTTCTaGTGGGTCTCCAGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHHVVSF*WVSRGE
Trigger: CTCCCCTCTGGAGACCCACAAGAAACTGACCACGTG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: LAPWTCDLNQIITTSARLGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 5 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 5 (lower is better)
Translates to: QHIGHHVANLGVASLRMKVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTCAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: STSVICCISHSSVPPSSGQAGAE*VRGFLC
Trigger: GCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTG...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACCTCACAGGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: QSLRRGGTHLQRPPGTSQDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...CTGTGAGGTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CAGAGCGTAGGACAGAAGTTAAGGTGGCCTCCTCTGGTTCACAGGCCTCCCCAGAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: QSVGQKLRWPPLVHRPPQSNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...CTGGGGAGGCCTGTGAACCAGAGGAGGCCACCTTAACTTCTGTCCTACGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CAA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: HSIQQEHERLEVSARDSVPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCCACTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: ARVPLANIFTHLTSPVCPLRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...TGGACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAGGCGGTCCTCGCACTaGCTCAGGGACATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATRRSSH*LRDMQL
Trigger: CAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGGCGGTCCTCGCACTaGCTCAGGGACATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLRRSSH*LRDMQL
Trigger: CAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAAGGCGGTCCTCGCACTaGCTCAGGGACATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QHIGHHVANLGVASLRMKRRSSH*LRDMQL
Trigger: CAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCT...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAATCTCGAATTTCCACTaGCGTGCCTGCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSISNFH*RACRSQ
Trigger: CTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGAT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: STQATRLLWVSKGNALEVPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GTGGGCAATGGCCAGGAGGGTGAAGCCATCCACGGGCCGCCGGGCCAAGTAGTACTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 5 (lower is better)
Translates to: VGNGQEGEAIHGPPGQVVLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...TACTACTTGGCCCGGCGGCCCGTGGATGGCTTCACCCTCCTGGCCATTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GGTATGGAAAAACTGGACCACCCTGGTGTGGGCGTCCAGAACCTGGGCAGGGGGGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 5 (lower is better)
Translates to: GMEKLDHPGVGVQNLGRGVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...CCCCCTGCCCAGGTTCTGGACGCCCACACCAGGGTGGTCCAGTTTTTCCATACC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CCACAAACTGCTCACCCAGCTCCTTCAGGTAGCAGGCGTGAGTCTTGTTCTTGGAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: PQTAHPAPSGSRRESCSWSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...CCAAGAACAAGACTCACGCCTGCTACCTGAAGGAGCTGGGTGAGCAGTTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CCCGGAGGTGATGTCCAGCACCAGGACGATGTTGTCATAGGCGATGGCCAGGCGTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: PGGDVQHQDDVVIGDGQASGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...CGCCTGGCCATCGCCTATGACAACATCGTCCTGGTGCTGGACATCACCTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCTCCACAGACTGACCACACCATCCCTGGACACTGTCAGCAGTGTGGCCTGGGACAGAGGTTGACTGGTTaGGCATTTGCAAGAAATGCA +
Preference number: 5 (lower is better)
Translates to: APQTDHTIPGHCQQCGLGQRLTG*AFARNA
Trigger: TGCATTTCTTGCAAATGCCAAACCAGTCAACCTCTG...TCCCAGGCCACACTGCTGACAGTGTCCAGGGATGGTGTGGTCAGTCTGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CAA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TGCACACTCGTAAAGAAAGAGGTCCCCATTGGTCATGCTGTAGACCACGCGGTAGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: CTLVKKEVPIGHAVDHAVDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...TACCGCGTGGTCTACAGCATGACCAATGGGGACCTCTTTCTTTACGAGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp ATCTTGTTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: ILFLAFCQVPNSDFVFVPKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...GGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: GDRATPSASAGLQPYVRTSASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp ACGAGGCCCGTAAATAGGAGCTTGCGCTGCTCAGCAACCTCCAGACACCTGATCGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TRPVNRSLRCSATSRHLIDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...GATCAGGTGTCTGGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGGCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCAAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CCCCATTGGTCATGCTGTAGACCACGCGGTAGTCCGTCAGAATGGCCACGCTGGTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: PHWSCCRPRGSPSEWPRWSGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...CCAGCGTGGCCATTCTGACGGACTACCGCGTGGTCTACAGCATGACCAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGGAGAAGCAAGCACATaGGACCCCTCTGCAGTAAGA +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHGEAST*DPSAVR
Trigger: TCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAAGGACAGAGGCCCTTaGCAGTGTCAGCGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATKDRGP*QCQRSG
Trigger: GCCAGAACGCTGACACTGCAAAGGGCCTCTGTCCTT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp CCAGAGATGCCCCGGCAGGAAATCCAGCTCATGCTGCCCAGAACCTCCTGTTTCATCCTGAGACCAAGATaGATCAGGAACATGGCTGAA +
Preference number: 5 (lower is better)
Translates to: PEMPRQEIQLMLPRTSCFILRPR*IRNMAE
Trigger: TTCAGCCATGTTCCTGATCAATCTTGGTCTCAGGAT...GAAACAGGAGGTTCTGGGCAGCATGAGCTGGATTTCCTGCCGGGGCATCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS CCA 90 bp ACCGGTCAACCTCCTCCAAGCAGAGTTCTGTGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATACCCCACCTCAGATCAACGACCTCAA +
Preference number: 5 (lower is better)
Translates to: TGQPPPSRVLWSSGQ*LQCSEYPTSDQRPQ
Trigger: TTGAGGTCGTTGATCTGAGGTGGGGTATTCGGAACATTGAAGCCACTGACCACTTGACCACAGAACTCTGCTTGGAGGAGGTTGACCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 90 bp TTCCAACACCGGTCAACCTCCTCCAAGCAGAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTCCGAATACCCCACCTCAGATCAACG +
Preference number: 5 (lower is better)
Translates to: FQHRSTSSKQSSVVK*SVASMFRIPHLRST
Trigger: CGTTGATCTGAGGTGGGGTATTCGGAACATTGAAGCCACTGACCACTTGACCACAGAACTCTGCTTGGAGGAGGTTGACCGGTGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 90 bp TTGAATTTGCCTCCACCACAATTTCTGTTCCTTCTCTCGTTTTCCTaGGTCCCAGCAGGCTCCTTGGACCCGAATTCACTTCAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: LNLPPPQFLFLLSFS*VPAGSLDPNSLQRL
Trigger: CAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTGGGACCCAGGAAAACGAGAGAAGGAACAGAAATTGTGGTGGAGGCAAATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS-3UTR CAA 90 bp ACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACAGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: TGNSAPVGLQGKRFGSCTVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...TGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GATCTTCCAAAGCCTGCGGCGAGGAGGGACTCATCTTCAGAGACCACCAGGAACTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: DLPKPAARRDSSSETTRNSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...GTTCCTGGTGGTCTCTGAAGATGAGTCCCTCCTCGCCGCAGGCTTTGGAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCTCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: VGLQGKRFGSCTLVKKEVSFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...GACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGGTGTCCAGGGAATCTaGTTCCTCGCCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWGVQGI*FLAFCQ
Trigger: TTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCATCTCGAATTTCCACTaGCGTGCCTGCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLISNFH*RACRSQ
Trigger: CTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGAT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TGGATCTCTCTAAGGAAGACGGTGGCTCCCTGTTCCCGGTCCTCTGAGCTCAGCTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: WISLRKTVAPCSRSSELSSGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...GCTGAGCTCAGAGGACCGGGAACAGGGAGCCACCGTCTTCCTTAGAGAGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACGACAGCAGTAGGGTCTaGTTCAGCTCAAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHDSSRV*FSSKAS
Trigger: AGAGGCTTTTGAGCTGAACAAGACCCTACTGCTGTC...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCGACAGCAGTAGGGTCTaGTTCAGCTCAAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GDRATPSASAGLQPYVRTDSSRV*FSSKAS
Trigger: AGAGGCTTTTGAGCTGAACAAGACCCTACTGCTGTC...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCCCCGACGCCTTCCAGGATGTCCAGAAGGGTCCCCTGTTCTGACAGACTCCACGAGCCACCGAGGCTTTaGCCATTATTATTATTATTA +
Preference number: 5 (lower is better)
Translates to: APTPSRMSRRVPCSDRLHEPPRL*PLLLLL
Trigger: TAATAATAATAATAATGGCAAAAGCCTCGGTGGCTC...GTGGAGTCTGTCAGAACAGGGGACCCTTCTGGACATCCTGGAAGGCGTCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCCCTGGCCACGCTCCCTaGGTTACTGCCTGCAACAGC +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSPGHAP*VTACNS
Trigger: GCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAGG...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS CCA 90 bp TGGATGTTTTCCAACACCGGTCAACCTCCTCCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTTCAATGTTCCGAATACCCCACCTCA +
Preference number: 5 (lower is better)
Translates to: WMFSNTGQPPPSRVL*SSGQWLQCSEYPTS
Trigger: TGAGGTGGGGTATTCGGAACATTGAAGCCACTGACCACTTGACCACAGAACTCTGCTTGGAGGAGGTTGACCGGTGTTGGAAAACATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 90 bp GTCCAGGACAGGGATCAGCACATTTCTCAACAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGTCAACCTCCTCCAAGCAGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: VQDRDQHISQQKLAL*MFSNTGQPPPSRVL
Trigger: CAGAACTCTGCTTGGAGGAGGTTGACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTGTTGAGAAATGTGCTGATCCCTGTCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS CCA 90 bp GGCTCCTTGGACCCGAATTCACTTCAGCGCCTGGCCACGCTCCCTTaGTTACTGCCTGCAACAGCTGATATGTTTCTACATGTTATTGTT +
Preference number: 5 (lower is better)
Translates to: GSLDPNSLQRLATLP*LLPATADMFLHVIV
Trigger: AACAATAACATGTAGAAACATATCAGCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGGCAGGCGGTGGGTCTaGAGGACCCCTGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHGRRWV*RTPGCM
Trigger: CATGCACCCAGGGGTCCTCAAGACCCACCGCCTGCC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 5 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCRTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAQAGAE*VRGFLC
Trigger: GCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 5 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCGCTGAGATCCCAGACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCTCCAGATTCCAAGCATaGATCTTTGAGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: SLRSQTLKDEDCGEADATSRFQA*IFEPDA
Trigger: AGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGA...GGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp TCCACACAGGCAACTCGGCTCCTGTGGGTCTCCAAGGGAAACGCTTTGGAAGTTCCCGTGATGATCAGGTaGTTCTCAGTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: STQATRLLWVSKGNALEVPVMIR*FSVPKT
Trigger: TGTTTTTGGTACTGAGAACAACCTGATCATCACGGG...AACTTCCAAAGCGTTTCCCTTGGAGACCCACAGGAGCCGAGTTGCCTGTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TCGCTGAGATCCCAGACCTTGAAAGATGAGGACTGTGGGGAAGCAGATGCCACCCCCGTGATGATCAGGTaGTTCTCAGTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: SLRSQTLKDEDCGEADATPVMIR*FSVPKT
Trigger: TGTTTTTGGTACTGAGAACAACCTGATCATCACGGG...GGTGGCATCTGCTTCCCCACAGTCCTCATCTTTCAAGGTCTGGGATCTCAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCGGTGTCCAGGGAATCTaGTTCCTCGCCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGGVQGI*FLAFCQ
Trigger: TTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACC...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATAATCTCGAATTTCCACTaGCGTGCCTGCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: CFWTETAQVGVSSLMLDIISNFH*RACRSQ
Trigger: CTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGAT...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATATTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: CFWTETAQVGVSSLMLDILTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGGAGAAGCAAGCACATaGGACCCCTCTGCAGTAAGA +
Preference number: 5 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMGEAST*DPSAVR
Trigger: TCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCC...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCCCCACGTACACATACTaGTCATCCTTGGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVPTYTY*SSLEKQ
Trigger: TTGCTTCTCCAAGGATGACAAGTATGTGTACGTGGG...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS GCA 90 bp TGGACCCGAATTCACTTCAGCGCCTGGCCACGCTCCCTTGGTTACTaGCAACAGCTGATATGTTTCTACATGTTATTGTTTGTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: WTRIHFSAWPRSLGY*QQLICFYMLLFVCP
Trigger: GGGACAGACAAACAATAACATGTAGAAACATATCAGCTGTTGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS GCA 90 bp TTTCGCTTGGCTCTCACTCTGTCTTACCTGCCACCATGTAAGATGTaGCTCTTTGCTTCTCCTTTGCCTTCAGCCATGATTGTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FRLALTLSYLPPCKM*LFASPLPSAMIVRP
Trigger: AGGCCTCACAATCATGGCTGAAGGCAAAGGAGAAGCAAAGAGGCACATCTTACATGGTGGCAGGTAAGACAGAGTGAGAGCCAAGCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS CCA 90 bp GGCTCCTTGGACCCGAATTCACTTCAGCGCCTGGCCACGCTCCCTTaGTTACTGCCAACAGCTGATATGTTTCTACATGTTATTGTTTGT +
Preference number: 5 (lower is better)
Translates to: GSLDPNSLQRLATLP*LLPTADMFLHVIVC
Trigger: ACAAACAATAACATGTAGAAACATATCAGCTGTTGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCCAGCTCCAGGTCACTaGGCCTGGCAGTCAGATGGT +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCPAPGH*AWQSDG
Trigger: ACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTGTGCCCCAGCAGCCTaGGCATCTGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: LKPWVQIYTSKRILFALTCAPAA*ASAQPA
Trigger: AGCTGGCTGAGCAGATGCCAAGGCTGCTGGGGCACA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLRTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHQAGAE*VRGFLC
Trigger: GCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTAAGCGCAGCAGCTCCTaGCTGGGCGGGGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLKRSSS*LGGVQS
Trigger: AGATTGGACCCCGCCCAGCAAGGAGCTGCTGCGCTT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 5 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTGGGTCTCCAAGGGAAACGCTTTGGAAGTTGCACACTCGTAAAGAAAGAGGTCGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: VGLQGKRFGSCTLVKKEVVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...GACCTCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTCCCTTGGAGACCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: QHIGHHVANLGVASLRMKVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CATAGCATCCAGCAGGAGCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: HSIQQEHERLEVSARDSVKEMEP*LNPVTS
Trigger: GCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTT...CACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGCTCCTGCTGGATGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp CACCATGTCTTCATGTTCCAGATCCATGGCCATGAATCGGCGAAAGCCCCTCGACCCGTGATGATCAGGTaGTTCTCAGTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: HHVFMFQIHGHESAKAPRPVMIR*FSVPKT
Trigger: TGTTTTTGGTACTGAGAACAACCTGATCATCACGGG...TCGAGGGGCTTTCGCCGATTCATGGCCATGGATCTGGAACATGAAGACATGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGGGACCCCGTGATGATCAGGTTGTTCTCAGTACCAAAAACAGCCGTCTCCACCCCCGTGATGATCAGGTaGTTCTCAGTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: RDPVMIRLFSVPKTAVSTPVMIR*FSVPKT
Trigger: TGTTTTTGGTACTGAGAACAACCTGATCATCACGGG...GGTGGAGACGGCTGTTTTTGGTACTGAGAACAACCTGATCATCACGGGGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTAGGCGGTCCTCGCACTaGCTCAGGGACATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCRRSSH*LRDMQL
Trigger: CAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTATCTCGAATTTCCACTaGCGTGCCTGCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: STSVICCISHSSVPPSSGISNFH*RACRSQ
Trigger: CTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGAT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCATCCTTGGAGAAGCAAGCACATTGGACCCCTCTGCAGTAAGAACTCGTGTATCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 5 (lower is better)
Translates to: VILGEASTLDPSAVRTRVSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...TACACGAGTTCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCCAAGGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CAA 90 bp GCATCTGGAAGCTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGACAGCAGTAGGGTCTaGTTCAGCTCAAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: ASGSFSSNLSPLEETKEMDSSRV*FSSKAS
Trigger: AGAGGCTTTTGAGCTGAACAAGACCCTACTGCTGTC...CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAGCTTCCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGCATTGGGTAAGCCCTaGATTCACAGAGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWALGKP*IHREAV
Trigger: CACTGCTTCTCTGTGAATCAAGGGCTTACCCAATGC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACACATACTTGTCATCCTaGGAGAAGCAAGCACATTGG +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHTYLSS*EKQAHW
Trigger: CCAATGTGCTTGCTTCTCCAAGGATGACAAGTATGT...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR CAA 90 bp GATCTCACTGGAGGTGTCCAGGGAATCTTGTTCCTCGCCTTCTGCCAAGTCCCACTTCTGATCTTGAATTaGCCTCCACCACAATTTCTG +
Preference number: 5 (lower is better)
Translates to: DLTGGVQGILFLAFCQVPLLILN*PPPQFL
Trigger: CAGAAATTGTGGTGGAGGCAAATTCAAGATCAGAAG...TGGGACTTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACCTCCAGTGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS TCA 90 bp ACTTCAGCGCCTGGCCACGCTCCCTTGGTTACTGCCTGCAACAGCTaGTATGTTTCTACATGTTATTGTTTGTCTGTCCCACGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: TSAPGHAPLVTACNS*YVSTCYCLSVPRES
Trigger: ACTTTCTCGTGGGACAGACAAACAATAACATGTAGAAACATATCAGCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS GCA 90 bp TGGACCCGAATTCACTTCAGCGCCTGGCCACGCTCCCTTGGTTACTaGCTGCAACAGCTGATATGTTTCTACATGTTATTGTTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: WTRIHFSAWPRSLGY*LQQLICFYMLLFVC
Trigger: ACAGACAAACAATAACATGTAGAAACATATCAGCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS GCA 90 bp GCCAAAGAGATGGAGCCATTGCTAAACCCGGTAACAAGCTTTCCTTaGTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: AKEMEPLLNPVTSFP*FWTETAQVGVSSLM
Trigger: CATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674103.1
CDS CCA 90 bp TCTTTACTGTCCAGGACAGGGATCAGCACATTTCTCAACAAAAGCTaGCCCTATGGATGTTTTCCAACACCGGTCAACCTCCTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: SLLSRTGISTFLNKS*PYGCFPTPVNLLQA
Trigger: TGCTTGGAGGAGGTTGACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTGTTGAGAAATGTGCTGATCCCTGTCCTGGACAGTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CAA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTCCAGCTCCAGGTCACTaGGCCTGGCAGTCAGATGGT +
Preference number: 5 (lower is better)
Translates to: LKPWVQIYTSKRILFALTPAPGH*AWQSDG
Trigger: ACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGG...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TGGCGAGGGTCCCTTTGGCAAATATTTTCACACACCTCACCTCTCCTGTGTGTCTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: WRGSLWQIFSHTSPLLCVSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...GACACACAGGAGAGGTGAGGTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQERTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCAGGCGGGTGCAGAGTaGGTGCGTGGCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFQAGAE*VRGFLC
Trigger: GCAGAGGAAGCCACGCACCAACTCTGCACCCGCCTG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 5 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 5 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTTCTCCAGCAATCTGTCCCCTTTGGAGGAAACCAAAGAGATGGAGCCATTGCTTTGGCGAGGGTCCCTTaGGCAAATATTTTCACACAC +
Preference number: 5 (lower is better)
Translates to: LLQQSVPFGGNQRDGAIALARVP*ANIFTH
Trigger: GTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA...AGCAATGGCTCCATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCTGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCTTGGCGAGGGTCCCTTaGGCAAATATTTTCACACAC +
Preference number: 5 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELLARVP*ANIFTH
Trigger: GTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAAAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKKEMEP*LNPVTS
Trigger: GCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTT...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATKEMEP*LNPVTS
Trigger: GCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTT...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELKEMEP*LNPVTS
Trigger: GCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTT...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: QHIGHHVANLGVASLRMKSNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGGTGTCCAGGGAATCTaGTTCCTCGCCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: LAPWTCDLNQIITTSARLGVQGI*FLAFCQ
Trigger: TTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTCTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCLRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTAGGCGGTCCTCGCACTaGCTCAGGGACATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIRRSSH*LRDMQL
Trigger: CAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCATCTCGAATTTCCACTaGCGTGCCTGCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSISNFH*RACRSQ
Trigger: CTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGAT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCCCTCAATACCTCCCACTCCTTCTCATCGATCCGCGAGGGAATCAGACAGGGGCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 5 (lower is better)
Translates to: SLNTSHSFSSIREGIRQGLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...CCCCTGTCTGATTCCCTCGCGGATCGATGAGAAGGAGTGGGAGGTATTGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVSGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSLTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS TCA 90 bp TTCACTTCAGCGCCTGGCCACGCTCCCTTGGTTACTGCCAACAGCTaGTATGTTTCTACATGTTATTGTTTGTCTGTCCCACGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: FTSAPGHAPLVTANS*YVSTCYCLSVPRES
Trigger: ACTTTCTCGTGGGACAGACAAACAATAACATGTAGAAACATATCAGCTGTTGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS-3UTR CAA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGTGGTGGCGGATCTCTaGGTAGAGCCACGCCAACTC +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHVVADL*VEPRQL
Trigger: GAGTTGGCGTGGCTCTACCAAGAGATCCGCCACCAC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LAPWTCDLNQIITTSARLICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAGGACGGTCACTGTCTaGTGCCCCAGCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFRTVTV*CPSSLG
Trigger: GCCAAGGCTGCTGGGGCACAAGACAGTGACCGTCCT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAAGGACGCCATGCCTCTaGGCTCTCTCGGATCCTGAC +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKRTPCL*ALSDPD
Trigger: GTCAGGATCCGAGAGAGCCAAGAGGCATGGCGTCCT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTTGGCGAGGGTCCCTTaGGCAAATATTTTCACACAC +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMLARVP*ANIFTH
Trigger: GTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACTGCCAGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATCCAGATTCCAAGCATaGATCTTTGAGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: TASVSPEVSSLTKDAHAKSRFQA*IFEPDA
Trigger: AGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGA...TTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAAAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: TGSAVSRFQALIFEPDAESNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCCCCGTGATGATCAGGTaGTTCTCAGTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELPVMIR*FSVPKT
Trigger: TGTTTTTGGTACTGAGAACAACCTGATCATCACGGG...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAACCCGTGATGATCAGGTaGTTCTCAGTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: QHIGHHVANLGVASLRMKPVMIR*FSVPKT
Trigger: TGTTTTTGGTACTGAGAACAACCTGATCATCACGGG...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAACTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQLRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTCTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LSTKQSILTEAVEMDTGILRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCAGGCGGTCCTCGCACTaGCTCAGGGACATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPRRSSH*LRDMQL
Trigger: CAACTGCATGTCCCTGAGCAAGTGCGAGGACCGCCT...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CCTGGCCAGAGAGTAAGTTCCACAAGTGCAGCGTGTAATCCTTTGAAGCAGAGTATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PGQRVSSTSAACNPLKQSIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...ACTCTGCTTCAAAGGATTACACGCTGCACTTGTGGAACTTACTCTCTGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAATACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: QHIGHHVANLGVASLRMKYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGGGAGAGATCAGCAGCTCTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: ELAQGRQFKSKAGRDQQLYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...GAGCTGCTGATCTCTCCCTGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGTTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLLTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS TCA 90 bp GGCAGTGCTCTGCAGGGCTTCCCTCTCTGCATCCATATCAACAGCTaGTATGTTTCTACATGTTATTGTTTGTCTGTCCCACGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: GSALQGFPLCIHINS*YVSTCYCLSVPRES
Trigger: ACTTTCTCGTGGGACAGACAAACAATAACATGTAGAAACATATCAGCTGTTGATATGGATGCAGAGAGGGAAGCCCTGCAGAGCACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549814.5
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCCAGCTCCAGGTCACTaGGCCTGGCAGTCAGATGGT +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFPAPGH*AWQSDG
Trigger: ACCATCTGACTGCCAGGCCAAGTGACCTGGAGCTGG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAATCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: TGSAVSRFQALIFEPDAESSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLSASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: ENSLTVELAQGRQFKSKASFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCAGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTGCAGCGTGTAATCCTTaGAAGCAGAGTTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: LKPWVQIYTSKRILFALTAACNP*KQSWRG
Trigger: CCCTCGCCAACTCTGCTTCAAAGGATTACACGCTGC...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTCCAGATTCCAAGCATaGATCTTTGAGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMSRFQA*IFEPDA
Trigger: AGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TGCTTCTGGACTGAGACGGCACAGGTAGGTGTTTCTTCTTTGATGCTGGACATATCCAGATTCCAAGCATaGATCTTTGAGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: CFWTETAQVGVSSLMLDISRFQA*IFEPDA
Trigger: AGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGA...TATGTCCAGCATCAAAGAAGAAACACCTACCTGTGCCGTCTCAGTCCAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: STSVICCISHSSVPPSSGDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGTAGGTGTTTCTTCTTaGATGCTGGACATATGTTGC +
Preference number: 5 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWVGVSS*MLDICC
Trigger: GCAACATATGTCCAGCATCAAAGAAGAAACACCTAC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLKEMEP*LNPVTS
Trigger: GCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGCCCGTGATGATCAGGTaGTTCTCAGTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMPVMIR*FSVPKT
Trigger: TGTTTTTGGTACTGAGAACAACCTGATCATCACGGG...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACCTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHLRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAATTGGAGTGAGGTCTAACAGGAATGGGACAGAAGGCTCACTCTCAGAGCTCGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: EIGVRSNRNGTEGSLSELETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...GAGCTCTGAGAGTGAGCCTTCTGTCCCATTCCTGTTAGACCTCACTCCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCATATTGGCCACCATGTTGCTAACCTGGGGGTGGCAAGTCTGAGAATGAAAGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: QHIGHHVANLGVASLRMKETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...TTTCATTCTCAGACTTGCCACCCCCAGGTTAGCAACATGGTGGCCAATATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGTGATAGGGCAACTCCTTCAGCTTCCGCAGGTTTGCAACCGTATGTGAGAACCCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 5 (lower is better)
Translates to: GDRATPSASAGLQPYVRTLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGAAGGAGTTGCCCTATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 5 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGCGTGAGTCCTGAAGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: SVSPEVSSLTKDAHAKCTYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...AGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACTTCAGGACTCACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 5 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGACACAATCTCTGCCTTCCACATGTCCAGTCTCTGTCTCTCCCTGCTGCTCACCTAAGGTTGCTTTTATaGAGACTCTATCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: RHNLCLPHVQSLSLPAAHLRLLL*RLYQEF
Trigger: GAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAG...GTGAGCAGCAGGGAGAGACAGAGACTGGACATGTGGAAGGCAGAGATTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGTGATTCTGGGCTACAGTCACTAAGGTTGCTTTTATaGAGACTCTATCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: EALTAVGLFGHGDSGLQSLRLLL*RLYQEF
Trigger: GAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAG...TGACTGTAGCCCAGAATCACCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTCTCTGTCTCTCCCTGCTGCTCACCCAGGTGCATGGAAGTGTCTAGATTAGTCGAGCCACCGAGGCTTTaGCCATTATTATTATTATTA +
Preference number: 5 (lower is better)
Translates to: VSVSPCCSPRCMEVSRLVEPPRL*PLLLLL
Trigger: TAATAATAATAATAATGGCAAAAGCCTCGGTGGCTC...GACTAATCTAGACACTTCCATGCACCTGGGTGAGCAGCAGGGAGAGACAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GTTCTCAGTACCAAAAACAGCCGTCTCCACCATGTCTTCATGTTCCAGATCCATCCCACGTACACATACTaGTCATCCTTGGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: VLSTKNSRLHHVFMFQIHPTYTY*SSLEKQ
Trigger: TTGCTTCTCCAAGGATGACAAGTATGTGTACGTGGG...ATGGATCTGGAACATGAAGACATGGTGGAGACGGCTGTTTTTGGTACTGAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000518676.5
CDS-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LAPWTCDLNQIITTSARLVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTATCTGCTCAGCCAGCTaGCACATCAGGGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIICSAS*HIRAVF
Trigger: AAAGACAGCCCTGATGTGCAAGCTGGCTGAGCAGAT...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: ENSLTVELAQGRQFKSKASASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: LKPWVQIYTSKRILFALTSASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCGGCTCTGCAGTTTCCAGATTCCAAGCATTGATCTTTGAGCCAGATGCTGAAGTAGGTGTTTCTTCTTaGATGCTGGACATATGTTGC +
Preference number: 5 (lower is better)
Translates to: TGSAVSRFQALIFEPDAEVGVSS*MLDICC
Trigger: GCAACATATGTCCAGCATCAAAGAAGAAACACCTAC...TTCAGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGAAACTGCAGAGCCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSSNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCCCGTAAATAGGAGCTaGCGCTGCTCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFPVNRS*RCSATS
Trigger: GGAGGTTGCTGAGCAGCGCAAGCTCCTATTTACGGG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCCTCAGGGACATGCAGTaGATTGCTTTCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFLRDMQ*IAFRAS
Trigger: CGAGGCCCGGAAAGCAATCAACTGCATGTCCCTGAG...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACATCTCGAATTTCCACTaGCGTGCCTGCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHISNFH*RACRSQ
Trigger: CTGGGACCTGCAGGCACGCAAGTGGAAATTCGAGAT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: STSVICCISHSSVPPSSGIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTTTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCAGGCGTATGGGCCAATaGGGACCAGTAGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPRRMGQ*GPVELR
Trigger: CCTCAACTCTACTGGTCCCAATTGGCCCATACGCCT...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTGACCAGGCTGCTCTaGAACACCTGGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQELTRLL*NTWPQV
Trigger: CACTTGAGGCCAGGTGTTCAAGAGCAGCCTGGTCAA...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGCATTGGGTAAGCCCTaGATTCACAGAGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLALGKP*IHREAV
Trigger: CACTGCTTCTCTGTGAATCAAGGGCTTACCCAATGC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTAAGAAATGCAGACTGTaGCATTTTTGCCAACAGGGG +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLKKCRL*HFCQQG
Trigger: CCCCTGTTGGCAAAAATGCAACAGTCTGCATTTCTT...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518676.5
CDS-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCTCTTCAAGGATGTGTTaGTGGAGGTCTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: LAPWTCDLNQIITTSARLSSRMC*WRSWIS
Trigger: AGAGATCCAAGACCTCCACAAACACATCCTTGAAGA...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGATCATCTGCTGGCCTaGGTTTCCGGAAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFDHLLA*VSGKGL
Trigger: AAGCCCCTTTCCGGAAACCAAGGCCAGCAGATGATC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGTCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: TSKRILFALTRLNGANSLSFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACTCCTTTGAAGCAGAGTaGGCGAGGGTCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNSFEAE*ARVPLA
Trigger: TGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGA...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: LSTKQSILTEAVEMDTGIVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCTCCAGATTCCAAGCATaGATCTTTGAGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSSRFQA*IFEPDA
Trigger: AGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGA...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCTACAGCTTTATAAACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TYSFINCEVLWSTSVICCDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...ACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTTTATAAAGCTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGGTGTCCAGGGAATCTaGTTCCTCGCCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNGVQGI*FLAFCQ
Trigger: TTGGCAGAAGGCGAGGAACAAGATTCCCTGGACACC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTTCCCCCTTCATCTGGTGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: STSVICCISHSSVPPSSGETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...ACCAGATGAAGGGGGAACGGATGAATGTGAGATACAGCAAATCACTGATGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AATGAAGCCACTGGTGGTTGGGATGATTCTGTTTACCACAGCATGGACAAACTGGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 5 (lower is better)
Translates to: NEATGGWDDSVYHSMDKLVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...CAGTTTGTCCATGCTGTGGTAAACAGAATCATCCCAACCACCAGTGGCTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLSGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTTATTGAGACTCTATCAGGAATTCCACGGAGGGGAGAAGGGATAGCCACCCTAAGGTTGCTTTTATaGAGACTCTATCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: AFIETLSGIPRRGEGIATLRLLL*RLYQEF
Trigger: GAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAG...GGTGGCTATCCCTTCTCCCCTCCGTGGAATTCCTGATAGAGTCTCAATAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCACGAGAGACTCGAAGTTTCTGCAAGAGACAGTGTGGAGGAGGGTATGGAAAACTAAGGTTGCTTTTATaGAGACTCTATCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: ARETRSFCKRQCGGGYGKLRLLL*RLYQEF
Trigger: GAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAG...TTTTCCATACCCTCCTCCACACTGTCTCTTGCAGAAACTTCGAGTCTCTCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGACAGCAGTAGGGTCTaGTTCAGCTCAAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQDSSRV*FSSKAS
Trigger: AGAGGCTTTTGAGCTGAACAAGACCCTACTGCTGTC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCATGGGAGCCACCGAGGCTTTaGCCATTATTATTATTATTA +
Preference number: 5 (lower is better)
Translates to: ALLITTGSTDSSGLVWPWEPPRL*PLLLLL
Trigger: TAATAATAATAATAATGGCAAAAGCCTCGGTGGCTC...CCATGGCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCACATACTTGTCATCCTaGGAGAAGCAAGCACATTGG +
Preference number: 5 (lower is better)
Translates to: TNLSNLQHLRSCCPIHPSTYLSS*EKQAHW
Trigger: CCAATGTGCTTGCTTCTCCAAGGATGACAAGTATGT...GCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR CAA 90 bp AGATTAGTCACTAGCTCCTGTGAGCATTTGAGTGTGGTGCCTGTGGAAGAGATGTGTTTCTACATGTTATaGTTTGTCTGTCCCACGAGA +
Preference number: 5 (lower is better)
Translates to: RLVTSSCEHLSVVPVEEMCFYML*FVCPTR
Trigger: TCTCGTGGGACAGACAAACAATAACATGTAGAAACA...CATCTCTTCCACAGGCACCACACTCAAATGCTCACAGGAGCTAGTGACTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTCAGCTTCCGCAGGTTaGCAACCGTATGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFSASAG*QPYVRT
Trigger: GGTTCTCACATACGGTTGCAAACCTGCGGAAGCTGA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTATCTACAAAACAATCAATTCTCACTGAGGCTGTGGAGATGGACACAGGCATTTTGGCGAGGGTCCCTTaGGCAAATATTTTCACACAC +
Preference number: 5 (lower is better)
Translates to: LSTKQSILTEAVEMDTGILARVP*ANIFTH
Trigger: GTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA...AATGCCTGTGTCCATCTCCACAGCCTCAGTGAGAATTGATTGTTTTGTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTTGGCGAGGGTCCCTTaGGCAAATATTTTCACACAC +
Preference number: 5 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLLARVP*ANIFTH
Trigger: GTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCGTTCAGCGGGATTTTTaGAGCCTCCATCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPVQRDF*SLHPKW
Trigger: CCATTTGGGATGGAGGCTCAAAAAATCCCGCTGAAC...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAGATGCTGGACATATGTaGCTTCCCCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQDAGHM*LPLKFS
Trigger: GGAAAACTTCAGGGGAAGCAACATATGTCCAGCATC...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGAAGACTGAGAAGGGCTTTTAGAAGGCTGTGGGCAAAGAAGAAAGATCCACTTGTAGGTGTTTCTTCTTaGATGCTGGACATATGTTGC +
Preference number: 5 (lower is better)
Translates to: RRLRRAFRRLWAKKKDPLVGVSS*MLDICC
Trigger: GCAACATATGTCCAGCATCAAAGAAGAAACACCTAC...AAGTGGATCTTTCTTCTTTGCCCACAGCCTTCTAAAAGCCCTTCTCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTAGGTGTTTCTTCTTaGATGCTGGACATATGTTGC +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSVGVSS*MLDICC
Trigger: GCAACATATGTCCAGCATCAAAGAAGAAACACCTAC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQKEMEP*LNPVTS
Trigger: GCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: LKPWVQIYTSKRILFALTSNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAAAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQSNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCCTGCGGTGAGGCTTTaGCTGAAAGGCACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: TSKRILFALTRLNGANSLPAVRL*LKGTGN
Trigger: ATTTCCAGTGCCTTTCAGCAAAAGCCTCACCGCAGG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCGTCCACATCAGTGATTaGCTGTATCTCACATTCATC +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSVHISD*LYLTFI
Trigger: GATGAATGTGAGATACAGCAAATCACTGATGTGGAC...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGAGCTCCTGTGAGCATTaGAGTGTGGTGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: TSKRILFALTRLNGANSLSSCEH*SVVPVE
Trigger: TTCCACAGGCACCACACTCAAATGCTCACAGGAGCT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTGTTTGGCCTAAGGTTGCTTTTATaGAGACTCTATCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: FWLCLLQLEALTAVGLFGLRLLL*RLYQEF
Trigger: GAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAG...GCCAAACAAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGACAGCAGTAGGGTCTaGTTCAGCTCAAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKDSSRV*FSSKAS
Trigger: AGAGGCTTTTGAGCTGAACAAGACCCTACTGCTGTC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGCATTGGGTAAGCCCTaGATTCACAGAGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKALGKP*IHREAV
Trigger: CACTGCTTCTCTGTGAATCAAGGGCTTACCCAATGC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGGAGAAGCAAGCACATaGGACCCCTCTGCAGTAAGA +
Preference number: 5 (lower is better)
Translates to: TSKRILFALTRLNGANSLGEAST*DPSAVR
Trigger: TCTTACTGCAGAGGGGTCCAATGTGCTTGCTTCTCC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR CAA 90 bp TCTGGATTTCTGGCTTTGCTTATTACAACTGGAAGCACTGACAGCAGTGGGCTTTGTTTCTACATGTTATaGTTTGTCTGTCCCACGAGA +
Preference number: 5 (lower is better)
Translates to: SGFLALLITTGSTDSSGLCFYML*FVCPTR
Trigger: TCTCGTGGGACAGACAAACAATAACATGTAGAAACA...AAGCCCACTGCTGTCAGTGCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR CAA 90 bp TTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCCCAATCTTCTGATCTaGAATTTGCCTCCACCACAA +
Preference number: 5 (lower is better)
Translates to: FAPTLVIFNTLEAAAQYIPNLLI*NLPPPQ
Trigger: TTGTGGTGGAGGCAAATTCAAGATCAGAAGATTGGG...GATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTTTATGGGTCTCTCCTaGCCCAATTCTCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPFMGLS*PNSPSN
Trigger: GTTGCTGGGAGAATTGGGCAAGGAGAGACCCATAAA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524140.7
CDS-3UTR CAA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGTGTTTGTGGAGGTCTaGGATCTCTCTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHVFVEV*DLSKED
Trigger: GTCTTCCTTAGAGAGATCCAAGACCTCCACAAACAC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTTGGCGAGGGTCCCTTaGGCAAATATTTTCACACAC +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPLARVP*ANIFTH
Trigger: GTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GCAGTAGGGTCTTGTTCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGGTAGGTGTTTCTTCTTaGATGCTGGACATATGTTGC +
Preference number: 5 (lower is better)
Translates to: AVGSCSAQKPLFLRLLLLVGVSS*MLDICC
Trigger: GCAACATATGTCCAGCATCAAAGAAGAAACACCTAC...CAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGAACAAGACCCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTCCTCGCCTTCTGCCAAGTCCCAAATAGTGACTTTGTTTTTGTCCCCAATTTTGTAGGTGTTTCTTCTTaGATGCTGGACATATGTTGC +
Preference number: 5 (lower is better)
Translates to: FLAFCQVPNSDFVFVPNFVGVSS*MLDICC
Trigger: GCAACATATGTCCAGCATCAAAGAAGAAACACCTAC...AAAATTGGGGACAAAAACAAAGTCACTATTTGGGACTTGGCAGAAGGCGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
ENST00000674103.1
CDS-3UTR CAA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAAGCAATCTGTCCCCTTaGGAGGAAACCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQESNLSP*EETKEM
Trigger: CATCTCTTTGGTTTCCTCCAAAGGGGACAGATTGCT...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACCCGTGATGATCAGGTaGTTCTCAGTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: ENSLTVELAQGRQFKSKAPVMIR*FSVPKT
Trigger: TGTTTTTGGTACTGAGAACAACCTGATCATCACGGG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LAPWTCDLNQIITTSARLKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AACTGTGAGGTTCTGTGGTCCACATCAGTGATTTGCTGTATCTCACATTCATCCAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: NCEVLWSTSVICCISHSSKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...GGATGAATGTGAGATACAGCAAATCACTGATGTGGACCACAGAACCTCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TGTAATCCTTTGAAGCAGAGTTGGCGAGGGTCCCTTTGGCAAATATTTTCACACAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: CNPLKQSWRGSLWQIFSHKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...GTGTGAAAATATTTGCCAAAGGGACCCTCGCCAACTCTGCTTCAAAGGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000646016.2
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATTGAGGCTAGGACTGTaGGGAAAGAGAAGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKLRLGL*GKRSSL
Trigger: AAGAGAGCTTCTCTTTCCCAACAGTCCTAGCCTCAA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTCCCAGTGGTGGACATaGGATCAGTCTAGCCGATTA +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFSQWWT*DQSSRL
Trigger: TAATCGGCTAGACTGATCCAATGTCCACCACTGGGA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTACTTTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: LLFAPTLVIFNTLEAAAQYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...TTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAAAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGACAGCAGTAGGGTCTaGTTCAGCTCAAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: TSKRILFALTRLNGANSLDSSRV*FSSKAS
Trigger: AGAGGCTTTTGAGCTGAACAAGACCCTACTGCTGTC...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACGACAGCAGTAGGGTCTaGTTCAGCTCAAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNDSSRV*FSSKAS
Trigger: AGAGGCTTTTGAGCTGAACAAGACCCTACTGCTGTC...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTCCCAATCTTCTGATCTaGAATTTGCCTCCACCACAA +
Preference number: 5 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLPNLLI*NLPPPQ
Trigger: TTGTGGTGGAGGCAAATTCAAGATCAGAAGATTGGG...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGTTGGCGAGGGTCCCTTaGGCAAATATTTTCACACAC +
Preference number: 5 (lower is better)
Translates to: TSKRILFALTRLNGANSLLARVP*ANIFTH
Trigger: GTGTGTGAAAATATTTGCCAAAGGGACCCTCGCCAA...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAATCCAGATTCCAAGCATaGATCTTTGAGCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKSRFQA*IFEPDA
Trigger: AGCATCTGGCTCAAAGATCAATGCTTGGAATCTGGA...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TTTTGCACCAACCTTAGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATGTAGGTGTTTCTTCTTaGATGCTGGACATATGTTGC +
Preference number: 5 (lower is better)
Translates to: FCTNLSNLQHLRSCCPIHVGVSS*MLDICC
Trigger: GCAACATATGTCCAGCATCAAAGAAGAAACACCTAC...ATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACTAAGGTTGGTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTGAAGCCATGGGTCCAGATATACACCAGCAAACGTATTCTTTTTGCTTTAACTGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LKPWVQIYTSKRILFALTETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...AGTTAAAGCAAAAAGAATACGTTTGCTGGTGTATATCTGGACCCATGGCTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCATCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: ENSLTVELAQGRQFKSKASGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTAATCTTCAACACCTTAGAAGCTGCTGCCCAATACATCCAAGCATACATCTTTCTGGATTTCTGGCTTaGCTTATTACAACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: SNLQHLRSCCPIHPSIHLSGFLA*LITTGS
Trigger: GCTTCCAGTTGTAATAAGCAAAGCCAGAAATCCAGA...AAGATGTATGCTTGGATGTATTGGGCAGCAGCTTCTAAGGTGTTGAAGATTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CTTGCACCTTGGACTTGTGACCTGAATCAAATTATAACTACTTCCGCAAGGCTCCTAAGGTTGCTTTTATaGAGACTCTATCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: LAPWTCDLNQIITTSARLLRLLL*RLYQEF
Trigger: GAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAG...GAGCCTTGCGGAAGTAGTTATAATTTGATTCAGGTCACAAGTCCAAGGTGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCCCACGTACACATACTaGTCATCCTTGGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNPTYTY*SSLEKQ
Trigger: TTGCTTCTCCAAGGATGACAAGTATGTGTACGTGGG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438489.6
ENST00000518676.5
ENST00000549814.5
ENST00000552788.1
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGTAGGTGTTTCTTCTTaGATGCTGGACATATGTTGC +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKVGVSS*MLDICC
Trigger: GCAACATATGTCCAGCATCAAAGAAGAAACACCTAC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAAGAAACGCTTTGGAAGTaGCACACTCGTAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQEETLWK*HTRKER
Trigger: TCTTTCTTTACGAGTGTGCAACTTCCAAAGCGTTTC...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCATCCACATTGCCTTCTaGAAGTTCTTAAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFIHIAF*KFLRGS
Trigger: GGACCCTCTTAAGAACTTCAAGAAGGCAATGTGGAT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCTACCAGAACTCCAGTTaGCATCTCAGGAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFYQNSS*HLRSNL
Trigger: GAGATTACTCCTGAGATGCAAACTGGAGTTCTGGTA...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp TCAGCTCAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAACTTCTGATCTTGAATTaGCCTCCACCACAATTTCTG +
Preference number: 5 (lower is better)
Translates to: SAQKPLFLRLLLLRLYQELLILN*PPPQFL
Trigger: CAGAAATTGTGGTGGAGGCAAATTCAAGATCAGAAG...TTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTGAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS-3UTR CAA 90 bp GAAAACAGTTTGACTGTTGAACTTGCACAAGGCAGACAGTTCAAAAGCAAAGCACTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 5 (lower is better)
Translates to: ENSLTVELAQGRQFKSKALVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...TGCTTTGCTTTTGAACTGTCTGCCTTGTGCAAGTTCAACAGTCAAACTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCTGTTTCTACATGTTATaGTTTGTCTGTCCCACGAGA +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPCFYML*FVCPTR
Trigger: TCTCGTGGGACAGACAAACAATAACATGTAGAAACA...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGAAGCTCTCTTTTCTATaGAAATTGGAGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: TSKRILFALTRLNGANSLKLSFL*KLETAA
Trigger: TGCTGCTGTCTCCAATTTCAATAGAAAAGAGAGCTT...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGGAGCCCCTAAGGTTGCTTTTATaGAGACTCTATCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: KRILFALTRLNGANSLEPLRLLL*RLYQEF
Trigger: GAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAG...GGGCTCCAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAAAAGCCTCTGTTTCTAAGGTTGCTTTTATTGAGACTCTATCAGGAATTCCACGAGCCACCGAGGCTTTaGCCATTATTATTATTATTA +
Preference number: 5 (lower is better)
Translates to: QKPLFLRLLLLRLYQEFHEPPRL*PLLLLL
Trigger: TAATAATAATAATAATGGCAAAAGCCTCGGTGGCTC...GTGGAATTCCTGATAGAGTCTCAATAAAAGCAACCTTAGAAACAGAGGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp GGGAGAAGGGATAGCCACCTTGAAGATTTAGACTATCCTAGCATTAAAGTAAAAGAGCCACCGAGGCTTTaGCCATTATTATTATTATTA +
Preference number: 5 (lower is better)
Translates to: GRRDSHLEDLDYPSIKVKEPPRL*PLLLLL
Trigger: TAATAATAATAATAATGGCAAAAGCCTCGGTGGCTC...TTTTACTTTAATGCTAGGATAGTCTAAATCTTCAAGGTGGCTATCCCTTCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp CAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCAACCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 5 (lower is better)
Translates to: QLINQRRTCQMHYRYKFNLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...GTTGAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp ACCAGCAAACGTATTCTTTTTGCTTTAACTAGATTAAATGGGGCTAACTCACTGCTTGTGAGCATTTGTTaGATTTGGTTTCATTTCCCT +
Preference number: 5 (lower is better)
Translates to: TSKRILFALTRLNGANSLLVSIC*IWFHFP
Trigger: AGGGAAATGAAACCAAATCAAACAAATGCTCACAAG...CAGTGAGTTAGCCCCATTTAATCTAGTTAAAGCAAAAAGAATACGTTTGCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS-3UTR CAA 90 bp AGTCAGCTCATTAACCAAAGACGCACATGCCAAATGCACTATAGATATAAATTCGAGCCACCGAGGCTTTaGCCATTATTATTATTATTA +
Preference number: 5 (lower is better)
Translates to: SQLINQRRTCQMHYRYKFEPPRL*PLLLLL
Trigger: TAATAATAATAATAATGGCAAAAGCCTCGGTGGCTC...GAATTTATATCTATAGTGCATTTGGCATGTGCGTCTTTGGTTAATGAGCTGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000552788.1
ENST00000646016.2
ENST00000673803.1
CDS TCA 72 bp CTTCACCCCGCAGAAGCCGCCGGCGGGTACTCGGGCTaGGAGGGCCCACGCTCATTGCCGCCCACCCACCAA +
Preference number: 6 (lower is better)
Translates to: LHPAEAAGGYSG*EGPRSLPPTHQ
Trigger: TTGGTGGGTGGGCGGCAATGAGCGTGGGCCCTCTCAGCCCGAGTACCCGCCGGCGGCTTCTGCGGGGTGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CCA 72 bp CCACCCACCAAGATGACCCTTCCCCTGGAAAGGGCGTaGGGCTCAGAGACCTCACGCCAGCAGCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: PPTKMTLPLERA*GSETSRQQPGS
Trigger: GCTGCCTGGCTGCTGGCGTGAGGTCTCTGAGCCCCACGCCCTTTCCAGGGGAAGGGTCATCTTGGTGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS TCA 72 bp TGTGGGTCTCCAGAGGGGAGTCCCTGCGGCCTCACCTaGCCGGTGGTAGTGCTGCCACTGCTCCTGGGTGAT +
Preference number: 6 (lower is better)
Translates to: CGSPEGSPCGLT*PVVVLPLLLGD
Trigger: ATCACCCAGGAGCAGTGGCAGCACTACCACCGGTCAGGTGAGGCCGCAGGGACTCCCCTCTGGAGACCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000674033.1
CDS TCA 72 bp AGAGGGCCCACGCTCATTGCCGCCCACCCACCAAGATaGCCCTTCCCCTGGAAAGGGCGTGGGGCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: RGPTLIAAHPPR*PFPWKGRGAQR
Trigger: TCTCTGAGCCCCACGCCCTTTCCAGGGGAAGGGTCATCTTGGTGGGTGGGCGGCAATGAGCGTGGGCCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CCA 72 bp GGCTCCTCCATCGCCCTCCTGGAGGACTTAAGCAAGTaGTCTCCCTCCCAGGGCATCGGCCGCATGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GSSIALLEDLSK*SPSQGIGRMVW
Trigger: CCAGACCATGCGGCCGATGCCCTGGGAGGGAGACCACTTGCTTAAGTCCTCCAGGAGGGCGATGGAGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 72 bp GACTGTGGAACTGATGAAGATGGTCACACCGCTGGGTaGAGGTGCTGGGAGGGGGCCGGCTTCACCCCGCAG +
Preference number: 6 (lower is better)
Translates to: DCGTDEDGHTAG*RCWEGAGFTPQ
Trigger: CTGCGGGGTGAAGCCGGCCCCCTCCCAGCACCTCCACCCAGCGGTGTGACCATCTTCATCAGTTCCACAGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CCA 72 bp GGCTCCTCCATCGCCCTCCTGGAGGACTTAAGCAAGTaGTCTCCCTCCCAGGGCATCGGCCGCATGGTCAAC +
Preference number: 6 (lower is better)
Translates to: GSSIALLEDLSK*SPSQGIGRMVN
Trigger: GTTGACCATGCGGCCGATGCCCTGGGAGGGAGACCACTTGCTTAAGTCCTCCAGGAGGGCGATGGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524140.7
CDS CAA 72 bp GCAGGACTGGGCTTCCCCAGTAAGGACAGAGGCCCTTaGCAGTGTCAGCGTTCTGGCTGTCCTGGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: AGLGFPSKDRGP*QCQRSGCPGGS
Trigger: GGAGCCCCCAGGACAGCCAGAACGCTGACACTGCAAAGGGCCTCTGTCCTTACTGGGGAAGCCCAGTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000674033.1
CDS CCA 72 bp CAGCAGGCTCCTTGGACCCGAATTCACTTCAGCGCCTaGCCACGCTCCCTTGGTTACTGCCTGCAACAGCTG +
Preference number: 6 (lower is better)
Translates to: QQAPWTRIHFSA*PRSLGYCLQQL
Trigger: CAGCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS CCA 72 bp TCCTTCTCTCGTTTTCCTGGGTCCCAGCAGGCTCCTTaGACCCGAATTCACTTCAGCGCCTGGCCACGCTCC +
Preference number: 6 (lower is better)
Translates to: SFSRFPGSQQAP*TRIHFSAWPRS
Trigger: GGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTGGGACCCAGGAAAACGAGAGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518676.5
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS TCA 72 bp AGGGCTTCCCTCTCTGCATCCATATCTTGGCATCCGTaGGCCTGGTTGGAATGCCGGCTCCTCCATCGCCCT +
Preference number: 6 (lower is better)
Translates to: RASLSASISWHP*AWLECRLLHRP
Trigger: AGGGCGATGGAGGAGCCGGCATTCCAACCAGGCTCACGGATGCCAAGATATGGATGCAGAGAGGGAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 72 bp TCTCTGCATCCATATCTTGGCATCCGTGAGCCTGGTTaGAATGCCGGCTCCTCCATCGCCCTCCTGGAGGAC +
Preference number: 6 (lower is better)
Translates to: SLHPYLGIREPG*NAGSSIALLED
Trigger: GTCCTCCAGGAGGGCGATGGAGGAGCCGGCATTCCAACCAGGCTCACGGATGCCAAGATATGGATGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 72 bp CAGCAGGCTCCTTGGACCCGAATTCACTTCAGCGCCTaGCCACGCTCCCTTGGTTACTGCCTGCTGATGATC +
Preference number: 6 (lower is better)
Translates to: QQAPWTRIHFSA*PRSLGYCLLMI
Trigger: GATCATCAGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673758.1
CDS GCA 72 bp CCCCACCTCAGATCAACGACCTCAAACATCAAGCCGTaGCTCTGGCAGAAGGTCTGGCACTTCAGGGTAGGC +
Preference number: 6 (lower is better)
Translates to: PHLRSTTSNIKP*LWQKVWHFRVG
Trigger: GCCTACCCTGAAGTGCCAGACCTTCTGCCAGAGGCACGGCTTGATGTTTGAGGTCGTTGATCTGAGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 72 bp AAGTGGTCTCCCTCCCAGGGCATCGGCCGCATGGTCTaGATACCACAGTTTAGCTGCAGCCTGCTGATCTCA +
Preference number: 6 (lower is better)
Translates to: KWSPSQGIGRMV*IPQFSCSLLIS
Trigger: TGAGATCAGCAGGCTGCAGCTAAACTGTGGTATCCAGACCATGCGGCCGATGCCCTGGGAGGGAGACCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518676.5
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 72 bp GGGGATGGATATTCTGAACACGTGGTCAGTTTCTTGTaGGTCTCCAGAGGGGAGTCCCTGCGGCCTCACCTG +
Preference number: 6 (lower is better)
Translates to: GDGYSEHVVSFL*VSRGESLRPHL
Trigger: CAGGTGAGGCCGCAGGGACTCCCCTCTGGAGACCCACAAGAAACTGACCACGTGTTCAGAATATCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000674033.1
CDS CCA 72 bp CAGCAGGCTCCTTGGACCCGAATTCACTTCAGCGCCTaGCCACGCTCCCTTGGTTACTGCCAACAGCTGATA +
Preference number: 6 (lower is better)
Translates to: QQAPWTRIHFSA*PRSLGYCQQLI
Trigger: TATCAGCTGTTGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTCCAAGGAGCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS CAA 72 bp AGTGCTCTGCAGGGCTTCCCTCTCTGCATCCATATCTaGGCATCCGTGAGCCTGGTTGGAATGCCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: SALQGFPLCIHI*ASVSLVGMPAP
Trigger: AGGAGCCGGCATTCCAACCAGGCTCACGGATGCCAAGATATGGATGCAGAGAGGGAAGCCCTGCAGAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518676.5
ENST00000524140.7
ENST00000646016.2
ENST00000673758.1
ENST00000673803.1
ENST00000674033.1
CDS TCA 72 bp TCATCGATCCGCGAGGGAATCAGACAGGGGCCGTACTaGTCACCGATGAGGGCAACAAAAGCTGGCCCTATG +
Preference number: 6 (lower is better)
Translates to: SSIREGIRQGPY*SPMRATKAGPM
Trigger: CATAGGGCCAGCTTTTGTTGCCCTCATCGGTGATCAGTACGGCCCCTGTCTGATTCCCTCGCGGATCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379808.7
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS GCA 72 bp CAGTGCCTCTGGGGAGCTGAACCAGCTCCTCTCCACTaGTTTCCTTGGTCTGCAAGCACTCATGGAGGGATA +
Preference number: 6 (lower is better)
Translates to: QCLWGAEPAPLH*FPWSASTHGGI
Trigger: TATCCCTCCATGAGTGCTTGCAGACCAAGGAAAGCAGTGGAGAGGAGCTGGTTCAGCTCCCCAGAGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CAA 72 bp ACAGGGGATGGATATTCTGAACACGTGGTCAGTTTCTaGTGGGTCTCCAGAGGGGAGTCCCTGCGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: TGDGYSEHVVSF*WVSRGESLRPH
Trigger: GTGAGGCCGCAGGGACTCCCCTCTGGAGACCCACAAGAAACTGACCACGTGTTCAGAATATCCATCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000674033.1
CDS CCA 72 bp TTGGTCTGCAAGCACTCATGGAGGGATATTAGACAGTaGCCTCCCCGCCAAGACCTCTGGATGTTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: LVCKHSWRDIRQ*PPRQDLWMLAP
Trigger: AGGAGCCAACATCCAGAGGTCTTGGCGGGGAGGCCACTGTCTAATATCCCTCCATGAGTGCTTGCAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS CCA 72 bp TCCTCTCCACTGCTTTCCTTGGTCTGCAAGCACTCATaGAGGGATATTAGACAGTGGCCTCCCCGCCAAGAC +
Preference number: 6 (lower is better)
Translates to: SSPLLSLVCKHS*RDIRQWPPRQD
Trigger: GTCTTGGCGGGGAGGCCACTGTCTAATATCCCTCCATGAGTGCTTGCAGACCAAGGAAAGCAGTGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673671.1
CDS TCA 72 bp TCATCGATCCGCGAGGGAATCAGACAGGGGCCGTACTaGTCACCGATGAGGGCTTTTTCCCTCTTTACTGTC +
Preference number: 6 (lower is better)
Translates to: SSIREGIRQGPY*SPMRAFSLFTV
Trigger: GACAGTAAAGAGGGAAAAAGCCCTCATCGGTGATCAGTACGGCCCCTGTCTGATTCCCTCGCGGATCGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646016.2
CDS CCA 72 bp CGGTCAACCTCCTCCAAGCAGAGTTCTGTGGTCAAGTaGTCAGTGGCTTCAATGTTCCGAATACCCCACCTC +
Preference number: 6 (lower is better)
Translates to: RSTSSKQSSVVK*SVASMFRIPHL
Trigger: GAGGTGGGGTATTCGGAACATTGAAGCCACTGACCACTTGACCACAGAACTCTGCTTGGAGGAGGTTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS CAA 90 bp CTGTCTTACCTGCCACCATGTAAGATGTGCCTCTTTGCTTCTCCTTaGCCTTCAGCCATGATTGTGAGGCCTCCCCAGCCATGTGGAATT +
Preference number: 6 (lower is better)
Translates to: LSYLPPCKMCLFASP*PSAMIVRPPQPCGI
Trigger: AATTCCACATGGCTGGGGAGGCCTCACAATCATGGCTGAAGGCAAAGGAGAAGCAAAGAGGCACATCTTACATGGTGGCAGGTAAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS TCA 72 bp GGGGGCTCCAGCCTCTCTTTAGCCTTTGCTGGTAGTTaGACGACCAATTTAGACTCCTCTGGGGAAATAGGT +
Preference number: 6 (lower is better)
Translates to: GGSSLSLAFAGS*TTNLDSSGEIG
Trigger: ACCTATTTCCCCAGAGGAGTCTAAATTGGTCGTTCAACTACCAGCAAAGGCTAAAGAGAGGCTGGAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524140.7
CDS CCA 72 bp CCTCCTCCAAGCAGAGTTCTGTGGTCAAGTGGTCAGTaGCTTCAATGTTCCGAATACCCCACCTCAGATCAA +
Preference number: 6 (lower is better)
Translates to: PPPSRVLWSSGQ*LQCSEYPTSDQ
Trigger: TTGATCTGAGGTGGGGTATTCGGAACATTGAAGCCACTGACCACTTGACCACAGAACTCTGCTTGGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 72 bp TCCAACACCGGTCAACCTCCTCCAAGCAGAGTTCTGTaGTCAAGTGGTCAGTGGCTTCAATGTTCCGAATAC +
Preference number: 6 (lower is better)
Translates to: SNTGQPPPSRVL*SSGQWLQCSEY
Trigger: GTATTCGGAACATTGAAGCCACTGACCACTTGACCACAGAACTCTGCTTGGAGGAGGTTGACCGGTGTTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379808.7
ENST00000438489.6
ENST00000518676.5
ENST00000524140.7
ENST00000549814.5
ENST00000552788.1
ENST00000646016.2
ENST00000673671.1
ENST00000673803.1
ENST00000674033.1
CDS CCA 72 bp GACCCGAATTCACTTCAGCGCCTGGCCACGCTCCCTTaGTTACTGCCAACAGCTGATATGTTTCTACATGTT +
Preference number: 6 (lower is better)
Translates to: DPNSLQRLATLP*LLPTADMFLHV
Trigger: AACATGTAGAAACATATCAGCTGTTGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAATTCGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS CAA 72 bp CCGCACCGATCTTCCAAAGCCAAAGAGATGGAGCCATaGCTAAACCCGGTAACAAGCTTTCCTTGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PHRSSKAKEMEP*LNPVTSFPCFW
Trigger: CCAGAAGCAAGGAAAGCTTGTTACCGGGTTTAGCAATGGCTCCATCTCTTTGGCTTTGGAAGATCGGTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674103.1
CDS CCA 72 bp AGGGATCAGCACATTTCTCAACAAAAGCTGGCCCTATaGATGTTTTCCAACACCGGTCAACCTCCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: RDQHISQQKLAL*MFSNTGQPPPS
Trigger: GCTTGGAGGAGGTTGACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTGTTGAGAAATGTGCTGATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS CCA 72 bp TCCAGGACAGGGATCAGCACATTTCTCAACAAAAGCTaGCCCTATGGATGTTTTCCAACACCGGTCAACCTC +
Preference number: 6 (lower is better)
Translates to: SRTGISTFLNKS*PYGCFPTPVNL
Trigger: GAGGTTGACCGGTGTTGGAAAACATCCATAGGGCCAGCTTTTGTTGAGAAATGTGCTGATCCCTGTCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438489.6
ENST00000646016.2
CDS TCA 72 bp GACTGTTGCATTTTTGCCAACAGGGGATGGATATTCTaGACACGTGGTCAGTTTCTTGTGGGTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: DCCIFANRGWIF*TRGQFLVGLQR
Trigger: CCTCTGGAGACCCACAAGAAACTGACCACGTGTTCAGAATATCCATCCCCTGTTGGCAAAAATGCAACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000674033.1
CDS GCA 72 bp ATTCACTTCAGCGCCTGGCCACGCTCCCTTGGTTACTaGCTGCAACAGCTGATATGTTTCTACATGTTATTG +
Preference number: 6 (lower is better)
Translates to: IHFSAWPRSLGY*LQQLICFYMLL
Trigger: CAATAACATGTAGAAACATATCAGCTGTTGCAGGCAGTAACCAAGGGAGCGTGGCCAGGCGCTGAAGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000673803.1
CDS GCA 72 bp ATTTCCCCTTTCGCTTGGCTCTCACTCTGTCTTACCTaGCACCATGTAAGATGTGCCTCTTTGCTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: ISPFAWLSLCLT*HHVRCASLLLL
Trigger: AAGGAGAAGCAAAGAGGCACATCTTACATGGTGGCAGGTAAGACAGAGTGAGAGCCAAGCGAAAGGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674033.1
CDS CAA 90 bp GGACCAGAGGTTGACTGGTTTGGCATTTGCAAGAAATGCAGACTGTaGCATTTTTGCCAACAGGGGATGGATATTCTGAACACGTGGTCA +
Preference number: 6 (lower is better)
Translates to: GPEVDWFGICKKCRL*HFCQQGMDILNTWS
Trigger: TGACCACGTGTTCAGAATATCCATCCCCTGTTGGCAAAAATGCAACAGTCTGCATTTCTTGCAAATGCCAAACCAGTCAACCTCTGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518676.5
ENST00000674033.1
CDS TCA 72 bp CTGCAGGGCTTCCCTCTCTGCATCCATATCAACAGCTaGTATGTTTCTACATGTTATTGTTTGTCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: LQGFPLCIHINS*YVSTCYCLSVP
Trigger: TGGGACAGACAAACAATAACATGTAGAAACATATCAGCTGTTGATATGGATGCAGAGAGGGAAGCCCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549814.5