RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NVL (Homo sapiens)

Ensembl gene IDs: ENSG00000143748

Ensembl transcript IDs: ENST00000281701.11, ENST00000340871.8, ENST00000391875.6, ENST00000436927.5, ENST00000461466.5, ENST00000461546.2, ENST00000462893.1, ENST00000467882.5, ENST00000468088.2, ENST00000468673.5, ENST00000469075.5, ENST00000469968.5, ENST00000470903.5, ENST00000470989.5, ENST00000481213.5, ENST00000482491.5, ENST00000483094.5, ENST00000487758.5, ENST00000488718.5, ENST00000489194.5, ENST00000492281.5, ENST00000493060.5, ENST00000496393.2, ENST00000498767.1

Found 680 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGACATCACCGGC +
Preference number: 1 (lower is better)
Translates to: LKVGPSERVGDSLPA*WASSSKPAAGDITG
Trigger: GCCGGTGATGTCTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481213.5
3UTR GCA 90 bp CATGGTGCATTTGACACAGCTTGCTCAAATAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACTCCAGACACAATCTCTGGAGCAGCC +
Preference number: 1 (lower is better)
Translates to: HGAFDTACSNSSLSF*SDSPDTPDTISGAA
Trigger: GGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACTATTTGAGCAAGCTGTGTCAAATGCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
3UTR-3UTR TCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR GCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGGTGTGGGGGATTCTCTaGCGGCTTGATGGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: CPAESGSFRACGGFSAGLVWGIL*RLDGLA
Trigger: AGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR CCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCGTCCTTCAGAGCGTGTaGGGGATTCTCTGCCGGCTT +
Preference number: 2 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSVLQSV*GILCRL
Trigger: AAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGAC...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR GCA 90 bp ATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGACATCAGTGTGGGGGATTCTCTaGCGGCTTGATGGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: ILCRLDGLAPLSRLLETSVWGIL*RLDGLA
Trigger: AGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC...TGATGTCTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481213.5
3UTR-3UTR TCA 90 bp ATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGACATCAGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAG +
Preference number: 2 (lower is better)
Translates to: ILCRLDGLAPLSRLLETSDSLPA*WASSSK
Trigger: CTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATC...TGATGTCTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481213.5
3UTR-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: CPAESGSFRACGGFSAGLNKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSNKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR GCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGTGTGGGGGATTCTCTaGCGGCTTGATGGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQVWGIL*RLDGLA
Trigger: AGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR TCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAG +
Preference number: 2 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQDSLPA*WASSSK
Trigger: CTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATC...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR TCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR CCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTGTCCTTCAGAGCGTGTaGGGGATTCTCTGCCGGCTT +
Preference number: 2 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLVLQSV*GILCRL
Trigger: AAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGAC...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR GCA 90 bp AGGCATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACT +
Preference number: 2 (lower is better)
Translates to: RHISRSNLPARLKAGSNESSLSF*SDSPDT
Trigger: AGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACT...CTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
3UTR-3UTR GCA 90 bp TCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGATATTCAGATCATCCATaGAGGTTAGGAGTTGGGCTA +
Preference number: 2 (lower is better)
Translates to: SRSNLPARLKAGSNESGRYSDHP*RLGVGL
Trigger: TAGCCCAACTCCTAACCTGCATGGATGATCTGAATA...TCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
3UTR-3UTR CCA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGACAGTGCACTGAAGCCTaGGTGACAGAGCGAGACGCT +
Preference number: 2 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGQCTEA*VTERDA
Trigger: AGCGTCTCGCTCTGTCACCCAGGCTTCAGTGCACTG...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
3UTR-3UTR CCA 90 bp ATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAAT +
Preference number: 2 (lower is better)
Translates to: IFLGRTFPHVSKQGLTSLSRHNL*SSHFQN
Trigger: ATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA...CAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
3UTR-3UTR TCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFNKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR TCA 72 bp GGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: GPSERVGDSLPA*WASSSKPAAGD
Trigger: GTCTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR CCA 72 bp ATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTaGGAGGATCGCTTGGGCCTGGGACGTCAAGACTGC +
Preference number: 3 (lower is better)
Translates to: IRIAFSIPVRLR*EDRLGLGRQDC
Trigger: GCAGTCTTGACGTCCCAGGCCCAAGCGATCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
3UTR TCA 72 bp ATAAAATGTTTACATGAGGCCGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTC +
Preference number: 3 (lower is better)
Translates to: IKCLHEAAPVSS*KWVLQSVWGIL
Trigger: GAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
3UTR-3UTR CAA 90 bp TCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGAGAAGCCACTTCTCTTTaGGGGGTAATAGCATCAATT +
Preference number: 3 (lower is better)
Translates to: SRSNLPARLKAGSNESGREATSL*GVIASI
Trigger: AATTGATGCTATTACCCCCAAAAGAGAAGTGGCTTC...TCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467882.5
3UTR-3UTR CAA 90 bp AGGATCGCTTGGGCCTGGGACGTCAAGACTGCGGTAAGCCATGATTGTGCCAGTATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 3 (lower is better)
Translates to: RIAWAWDVKTAVSHDCASIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...ACTGGCACAATCATGGCTTACCGCAGTCTTGACGTCCCAGGCCCAAGCGATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470989.5
3UTR GCA 72 bp TTTGACACAGCTTGCTCAAATAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACTCCAGACACAATCTCT +
Preference number: 3 (lower is better)
Translates to: FDTACSNSSLSF*SDSPDTPDTIS
Trigger: AGAGATTGTGTCTGGAGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACTATTTGAGCAAGCTGTGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
3UTR CCA 72 bp GCCACATTATTCAGATCATCCATGCAGGTTAGGAGTTaGGCTACAATTCTTCGTTCCATATCTTTTGAAGCC +
Preference number: 3 (lower is better)
Translates to: ATLFRSSMQVRS*ATILRSISFEA
Trigger: GGCTTCAAAAGATATGGAACGAAGAATTGTAGCCCAACTCCTAACCTGCATGGATGATCTGAATAATGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR TCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGGGAGACATCACCGGCTaGGGGACTCCTGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEGDITG*GTPANV
Trigger: AACGTTTGCAGGAGTCCCTCAGCCGGTGATGTCTCC...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGGAGACATCACCGGCTaGGGGACTCCTGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLGDITG*GTPANV
Trigger: AACGTTTGCAGGAGTCCCTCAGCCGGTGATGTCTCC...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSAAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAGTGTGGGGGATTCTCTaGCGGCTTGATGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGVWGIL*RLDGLA
Trigger: AGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGGTGTGGGGGATTCTCTaGCGGCTTGATGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRVWGIL*RLDGLA
Trigger: AGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCGAACCCTGCAGGTCTaGGCTTCATCGCGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSARTLQV*ASSRRS
Trigger: AGACCGACGCGATGAAGCCCAGACCTGCAGGGTTCG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAGTCCTTCAGAGCGTGTaGGGGATTCTCTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGVLQSV*GILCRL
Trigger: AAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGAC...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEWYTSG*RMCMSI
Trigger: GATGCTCATACACATGCGTCACCCGGAGGTGTACCA...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRWYTSG*RMCMSI
Trigger: GATGCTCATACACATGCGTCACCCGGAGGTGTACCA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCTCGGCACAGTGCCATaGGATCAGCACCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFLGTVP*DQHQQS
Trigger: GCTTTGTTGGTGCTGATCTCATGGCACTGTGCCGAG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAGACATCACCGGCTaGGGGACTCCTGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGGDITG*GTPANV
Trigger: AACGTTTGCAGGAGTCCCTCAGCCGGTGATGTCTCC...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGDSLPA*WASSSK
Trigger: CTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATC...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTGCCTCTCGGCACAGTaGCATGAGATCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRCLSAQ*HEISTN
Trigger: GTTGGTGCTGATCTCATGGCACTGTGCCGAGAGGCA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTGCCTCTCGGCACAGTaGCATGAGATCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLCLSAQ*HEISTN
Trigger: GTTGGTGCTGATCTCATGGCACTGTGCCGAGAGGCA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCGCCCGGGCGCAGGATTaGAGGGTCAATTATATCTGG +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFARAQD*RVNYIW
Trigger: CCAGATATAATTGACCCTGCAATCCTGCGCCCGGGC...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGGCCCGGGCGCAGGATTaGAGGGTCAATTATATCTGG +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRARAQD*RVNYIW
Trigger: CCAGATATAATTGACCCTGCAATCCTGCGCCCGGGC...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCGAACCCTGCAGGTCTaGGCTTCATCGCGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPARTLQV*ASSRRS
Trigger: AGACCGACGCGATGAAGCCCAGACCTGCAGGGTTCG...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCTTCCCACAGCCTGGTaGTCCATGAAGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFLPTAW*SMKENS
Trigger: GGAGTTCTCCTTCATGGACCACCAGGCTGTGGGAAG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTTCCCACAGCCTGGTaGTCCATGAAGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRLPTAW*SMKENS
Trigger: GGAGTTCTCCTTCATGGACCACCAGGCTGTGGGAAG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGAAGGAGGACCCCAGCTaGAGTCACCAATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLKEDPS*SHQSKS
Trigger: GCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTT...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAAAGGAGGACCCCAGCTaGAGTCACCAATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGKEDPS*SHQSKS
Trigger: GCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTT...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGTCCTTCAGAGCGTGTaGGGGATTCTCTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGVLQSV*GILCRL
Trigger: AAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGAC...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLWYTSG*RMCMSI
Trigger: GATGCTCATACACATGCGTCACCCGGAGGTGTACCA...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPWYTSG*RMCMSI
Trigger: GATGCTCATACACATGCGTCACCCGGAGGTGTACCA...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGCTCGGCACAGTGCCATaGGATCAGCACCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGLGTVP*DQHQQS
Trigger: GCTTTGTTGGTGCTGATCTCATGGCACTGTGCCGAG...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTTGCATCTGCTCCTCTaGGAGGGGATCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLLHLLL*EGILVS
Trigger: AGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTTGCATCTGCTCCTCTaGGAGGGGATCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFLHLLL*EGILVS
Trigger: AGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTGGAGACATCACCGGCTaGGGGACTCCTGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPAGDITG*GTPANV
Trigger: AACGTTTGCAGGAGTCCCTCAGCCGGTGATGTCTCC...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPDSLPA*WASSSK
Trigger: CTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATC...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGAGCTGCAGTGAGCTGTaGTCATGCCACTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGSCSEL*SCHCTQ
Trigger: CTGAGTGCAGTGGCATGATCACAGCTCACTGCAGCT...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340871.8
ENST00000482491.5
CDS-3UTR GCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGATTATCCACGAACCCTaGAGGTCTGGGCTTCATCGC +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLIIHEP*RSGLHR
Trigger: GCGATGAAGCCCAGACCTGCAGGGTTCGTGGATAAT...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTTGCCTCTCGGCACAGTaGCATGAGATCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSCLSAQ*HEISTN
Trigger: GTTGGTGCTGATCTCATGGCACTGTGCCGAGAGGCA...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGACTGCACACATTGCTaGCTCTCGGCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSADCTHC*LSAQCH
Trigger: ATGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTC...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGGACTGCACACATTGCTaGCTCTCGGCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLDCTHC*LSAQCH
Trigger: ATGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTC...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGACTGCACACATTGCTaGCTCTCGGCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPDCTHC*LSAQCH
Trigger: ATGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTC...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCATTGACTGCACACATTaGTGCCTCTCGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFIDCTH*CLSAQC
Trigger: GCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAAT...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGCACAGTCCTTGCATCTaGTCCTCTGAGAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLHSPCI*SSERGS
Trigger: AGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTG...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCACAGTCCTTGCATCTaGTCCTCTGAGAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFHSPCI*SSERGS
Trigger: AGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCCCGGGCGCAGGATTaGAGGGTCAATTATATCTGG +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPARAQD*RVNYIW
Trigger: CCAGATATAATTGACCCTGCAATCCTGCGCCCGGGC...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCTTCCCACAGCCTGGTaGTCCATGAAGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLLPTAW*SMKENS
Trigger: GGAGTTCTCCTTCATGGACCACCAGGCTGTGGGAAG...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGTGTCTTCCCACAGCCTaGTGGTCCATGAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLECLPTA*WSMKEN
Trigger: GTTCTCCTTCATGGACCACCAGGCTGTGGGAAGACA...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTGTCTTCCCACAGCCTaGTGGTCCATGAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRCLPTA*WSMKEN
Trigger: GTTCTCCTTCATGGACCACCAGGCTGTGGGAAGACA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLSERGS*SLSNPS
Trigger: GCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRSERGS*SLSNPS
Trigger: GCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFSERGS*SLSNPS
Trigger: GCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCAAAGCCTTCCCTTTTaGCAGAGGGTTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFQSLPF*QRVGLR
Trigger: CCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTAAGGAGGACCCCAGCTaGAGTCACCAATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSKEDPS*SHQSKS
Trigger: GCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGGTCCTTCAGAGCGTGTaGGGGATTCTCTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLVLQSV*GILCRL
Trigger: AAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGAC...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGTCCTTCAGAGCGTGTaGGGGATTCTCTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMVLQSV*GILCRL
Trigger: AAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGAC...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCGGTGACGCATGTGTATaGGCATCTTGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFGDACV*ASCRPL
Trigger: AAGAGGTCTGCAAGATGCTCATACACATGCGTCACC...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGGGTGACGCATGTGTATaGGCATCTTGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEGDACV*ASCRPL
Trigger: AAGAGGTCTGCAAGATGCTCATACACATGCGTCACC...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGGGTGACGCATGTGTATaGGCATCTTGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRGDACV*ASCRPL
Trigger: AAGAGGTCTGCAAGATGCTCATACACATGCGTCACC...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCTCGGCACAGTGCCATaGGATCAGCACCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLLGTVP*DQHQQS
Trigger: GCTTTGTTGGTGCTGATCTCATGGCACTGTGCCGAG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGTTGCATCTGCTCCTCTaGGAGGGGATCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLLHLLL*EGILVS
Trigger: AGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAA...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTTGCATCTGCTCCTCTaGGAGGGGATCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSALHLLL*EGILVS
Trigger: AGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGTTGCATCTGCTCCTCTaGGAGGGGATCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPLHLLL*EGILVS
Trigger: AGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAA...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCCAATCCAAGAGCTTTaGACTGGTCTGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRPIQEL*TGLGCV
Trigger: TACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGCCAATCCAAGAGCTTTaGACTGGTCTGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLPIQEL*TGLGCV
Trigger: TACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGG...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSDSLPA*WASSSK
Trigger: CTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATC...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLDSLPA*WASSSK
Trigger: CTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATC...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTAGCTGCAGTGAGCTGTaGTCATGCCACTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPASCSEL*SCHCTQ
Trigger: CTGAGTGCAGTGGCATGATCACAGCTCACTGCAGCT...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340871.8
ENST00000482491.5
CDS-3UTR GCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTATTATCCACGAACCCTaGAGGTCTGGGCTTCATCGC +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSIIHEP*RSGLHR
Trigger: GCGATGAAGCCCAGACCTGCAGGGTTCGTGGATAAT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGATTATCCACGAACCCTaGAGGTCTGGGCTTCATCGC +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGIIHEP*RSGLHR
Trigger: GCGATGAAGCCCAGACCTGCAGGGTTCGTGGATAAT...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTGCCTCTCGGCACAGTaGCATGAGATCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLCLSAQ*HEISTN
Trigger: GTTGGTGCTGATCTCATGGCACTGTGCCGAGAGGCA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGTGCCTCTCGGCACAGTaGCATGAGATCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMCLSAQ*HEISTN
Trigger: GTTGGTGCTGATCTCATGGCACTGTGCCGAGAGGCA...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGATTGACTGCACACATTaGTGCCTCTCGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLIDCTH*CLSAQC
Trigger: GCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAAT...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCATTGACTGCACACATTaGTGCCTCTCGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSAIDCTH*CLSAQC
Trigger: GCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAAT...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGATTGACTGCACACATTaGTGCCTCTCGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGIDCTH*CLSAQC
Trigger: GCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAAT...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTATTGACTGCACACATTaGTGCCTCTCGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSIDCTH*CLSAQC
Trigger: GCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAAT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCACAGTCCTTGCATCTaGTCCTCTGAGAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLHSPCI*SSERGS
Trigger: AGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTG...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTCAATGCACAGTCCTTaGATCTGCTCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLSMHSP*ICSSER
Trigger: CCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGACAGGGCACCAATATCTaGCCATGTCACATTAGGGAC +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGQGTNI*PCHIRD
Trigger: GTCCCTAATGTGACATGGGCAGATATTGGTGCCCTG...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGCAGGGCACCAATATCTaGCCATGTCACATTAGGGAC +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEQGTNI*PCHIRD
Trigger: GTCCCTAATGTGACATGGGCAGATATTGGTGCCCTG...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCAAAAACCTGCTGGCGTaGTTCCAGACCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFKNLLA*FQTIHL
Trigger: GAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTT...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGCGAACCCTGCAGGTCTaGGCTTCATCGCGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRARTLQV*ASSRRS
Trigger: AGACCGACGCGATGAAGCCCAGACCTGCAGGGTTCG...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGCTTCCCACAGCCTGGTaGTCCATGAAGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMLPTAW*SMKENS
Trigger: GGAGTTCTCCTTCATGGACCACCAGGCTGTGGGAAG...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCTTCCCACAGCCTGGTaGTCCATGAAGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPALPTAW*SMKENS
Trigger: GGAGTTCTCCTTCATGGACCACCAGGCTGTGGGAAG...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTGTCTTCCCACAGCCTaGTGGTCCATGAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSACLPTA*WSMKEN
Trigger: GTTCTCCTTCATGGACCACCAGGCTGTGGGAAGACA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTTGTCTTCCCACAGCCTaGTGGTCCATGAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSCLPTA*WSMKEN
Trigger: GTTCTCCTTCATGGACCACCAGGCTGTGGGAAGACA...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFPSLSS*TPLDGK
Trigger: TTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEPSLSS*TPLDGK
Trigger: TTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGG...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGCAAAGCCTTCCCTTTTaGCAGAGGGTTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGQSLPF*QRVGLR
Trigger: CCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTG...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGGTCTGGGTTGCGTACTaGTGCCAATATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEVWVAY*CQYCHG
Trigger: ACCATGGCAATATTGGCACCAGTACGCAACCCAGAC...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGAGCTTTGAACTGGTCTaGGTTGCGTACTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLESFELV*VAYWCQ
Trigger: TTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCT...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCCAAGAGCTTTGAACTaGTCTGGGTTGCGTACTGGT +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFPRALN*SGLRTG
Trigger: ACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCCAAGAGCTTTGAACTaGTCTGGGTTGCGTACTGGT +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRPRALN*SGLRTG
Trigger: ACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTAAGGAGGACCCCAGCTaGAGTCACCAATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPAKEDPS*SHQSKS
Trigger: GCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTT...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCCAATCCAAGAGCTTTaGACTGGTCTGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSAPIQEL*TGLGCV
Trigger: TACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAGAGTTCTTGGCTCGTTaGAAAACTTGTCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGEFLAR*KTCRTA
Trigger: TGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTC...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTATCACACAGGGTGCTaGGTTCTTGGCTCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFYHTGC*VLGSLK
Trigger: TTTCAACGAGCCAAGAACTCAGCACCCTGTGTGATA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGTCAATGCACAGTCCTTaGATCTGCTCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGSMHSP*ICSSER
Trigger: CCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGA...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGTCAATGCACAGTCCTTaGATCTGCTCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLSMHSP*ICSSER
Trigger: CCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGA...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGTACTGGTGCCAATATTaGCATGGTGAGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEYWCQY*HGELLS
Trigger: AGAGAGGAGCTCACCATGGCAATATTGGCACCAGTA...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGAAAAACCTGCTGGCGTaGTTCCAGACCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLKNLLA*FQTIHL
Trigger: GAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTT...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTAAAAACCTGCTGGCGTaGTTCCAGACCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPKNLLA*FQTIHL
Trigger: GAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTT...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAGCCATAATAAAAACCTaGTGGCGTGCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGAIIKT*WRASRP
Trigger: TGGTCTGGAAGCACGCCAGCAGGTTTTTATTATGGC...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGGCCATAATAAAAACCTaGTGGCGTGCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRAIIKT*WRASRP
Trigger: TGGTCTGGAAGCACGCCAGCAGGTTTTTATTATGGC...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGTCCACTCTTCTGTCTTaGCATTTCCTGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLSTLLS*HFLSQG
Trigger: GCCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGA...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGTCCACTCTTCTGTCTTaGCATTTCCTGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPSTLLS*HFLSQG
Trigger: GCCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGA...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGTTCACGTTGGAGATCTaGAATTCTAACCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEFTLEI*NSNPLA
Trigger: AGCCAGGGGGTTAGAATTCCAGATCTCCAACGTGAA...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGATCTTCCCACAGCCTGGTaGTCCATGAAGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: LGRTFPHVSKQGLTSLVDLPTAW*SMKENS
Trigger: GGAGTTCTCCTTCATGGACCACCAGGCTGTGGGAAG...ATCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTCTTCCCACAGCCTaGTGGTCCATGAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPACLPTA*WSMKEN
Trigger: GTTCTCCTTCATGGACCACCAGGCTGTGGGAAGACA...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSAPSLSS*TPLDGK
Trigger: TTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPPSLSS*TPLDGK
Trigger: TTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGG...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCCTGTGTTTCAGAAGTaGGCTCAGTTCCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSPVFQK*AQFPAF
Trigger: AAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGCCTGTGTTTCAGAAGTaGGCTCAGTTCCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPPVFQK*AQFPAF
Trigger: AAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGG...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGCCTGTGTTTCAGAAGTaGGCTCAGTTCCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGPVFQK*AQFPAF
Trigger: AAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGG...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLSERGS*SLSNPS
Trigger: GCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGACTTTTGGCAGAGGGTTaGACTGAGGATAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGLLAEG*TEDRAT
Trigger: TGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAG...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCAAAGCCTTCCCTTTTaGCAGAGGGTTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLQSLPF*QRVGLR
Trigger: CCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCAAAGCCTTCCCTTTTaGCAGAGGGTTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSQSLPF*QRVGLR
Trigger: CCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTG...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGTCTGGGTTGCGTACTaGTGCCAATATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGVWVAY*CQYCHG
Trigger: ACCATGGCAATATTGGCACCAGTACGCAACCCAGAC...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGTCTGGGTTGCGTACTaGTGCCAATATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSAVWVAY*CQYCHG
Trigger: ACCATGGCAATATTGGCACCAGTACGCAACCCAGAC...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGAGCTTTGAACTGGTCTaGGTTGCGTACTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGSFELV*VAYWCQ
Trigger: TTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCT...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGACAAGGCTGGCCAGATaGGAAGAATCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRTRLAR*EESSAS
Trigger: TGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGT...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCACAAGGCTGGCCAGATaGGAAGAATCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFTRLAR*EESSAS
Trigger: TGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGT...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAACTTATCCGTGGTGTTaGAGAGGTGGTTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGTYPWC*RGGFSL
Trigger: CAAAGAGAAACCACCTCTTCAACACCACGGATAAGT...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGGGTGACGCATGTGTATaGGCATCTTGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLGDACV*ASCRPL
Trigger: AAGAGGTCTGCAAGATGCTCATACACATGCGTCACC...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCCAATCCAAGAGCTTTaGACTGGTCTGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPAPIQEL*TGLGCV
Trigger: TACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGG...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCCAATCCAAGAGCTTTaGACTGGTCTGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLPIQEL*TGLGCV
Trigger: TACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGAGTTCTTGGCTCGTTaGAAAACTTGTCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPEFLAR*KTCRTA
Trigger: TGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTC...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGTATCACACAGGGTGCTaGGTTCTTGGCTCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPYHTGC*VLGSLK
Trigger: TTTCAACGAGCCAAGAACTCAGCACCCTGTGTGATA...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTT +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGISVSS*FTTRTL
Trigger: AAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGAT...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPNKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSNKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSASSLSF*SDSPDT
Trigger: AGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACT...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACT +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGSSLSF*SDSPDT
Trigger: AGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACT...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACT +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPSSLSF*SDSPDT
Trigger: AGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACT...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTCAATGCACAGTCCTTaGATCTGCTCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLSMHSP*ICSSER
Trigger: CCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCAGGGCACCAATATCTaGCCATGTCACATTAGGGAC +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLQGTNI*PCHIRD
Trigger: GTCCCTAATGTGACATGGGCAGATATTGGTGCCCTG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCAGGGCACCAATATCTaGCCATGTCACATTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSQGTNI*PCHIRD
Trigger: GTCCCTAATGTGACATGGGCAGATATTGGTGCCCTG...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTTACTGGTGCCAATATTaGCATGGTGAGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPYWCQY*HGELLS
Trigger: AGAGAGGAGCTCACCATGGCAATATTGGCACCAGTA...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTTACTGGTGCCAATATTaGCATGGTGAGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSYWCQY*HGELLS
Trigger: AGAGAGGAGCTCACCATGGCAATATTGGCACCAGTA...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTCCACTCTTCTGTCTTaGCATTTCCTGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLSTLLS*HFLSQG
Trigger: GCCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCTCCACTCTTCTGTCTTaGCATTTCCTGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSSTLLS*HFLSQG
Trigger: GCCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGA...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCGGCTGAGGGACTCCTaGAAACGTTCATACATGATT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSARLRDS*KRSYMI
Trigger: AATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCGGCTGAGGGACTCCTaGAAACGTTCATACATGATT +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSRLRDS*KRSYMI
Trigger: AATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCTCCTTCAGAATCTTTaGCAGGGGTCTTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSLLQNL*QGSSRE
Trigger: TTCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCTCCTTCAGAATCTTTaGCAGGGGTCTTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSALLQNL*QGSSRE
Trigger: TTCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGCTCCTTCAGAATCTTTaGCAGGGGTCTTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGLLQNL*QGSSRE
Trigger: TTCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAG...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTTTCACGTTGGAGATCTaGAATTCTAACCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSFTLEI*NSNPLA
Trigger: AGCCAGGGGGTTAGAATTCCAGATCTCCAACGTGAA...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCCTGTGTTTCAGAAGTaGGCTCAGTTCCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLPVFQK*AQFPAF
Trigger: AAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCTTTTGGCAGAGGGTTaGACTGAGGATAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLLLAEG*TEDRAT
Trigger: TGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAG...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTTTTGGCAGAGGGTTaGACTGAGGATAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPLLAEG*TEDRAT
Trigger: TGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAG...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGCTTTTGGCAGAGGGTTaGACTGAGGATAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGLLAEG*TEDRAT
Trigger: TGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAG...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTAGCTTTGAACTGGTCTaGGTTGCGTACTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPASFELV*VAYWCQ
Trigger: TTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCT...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCCAAGAGCTTTGAACTaGTCTGGGTTGCGTACTGGT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLPRALN*SGLRTG
Trigger: ACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCAGGGTGCTGAGTTCTTaGCTCGTTGAAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFRVLSS*LVEKLV
Trigger: GACAAGTTTTTCAACGAGCCAAGAACTCAGCACCCT...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGAGGGTGCTGAGTTCTTaGCTCGTTGAAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRRVLSS*LVEKLV
Trigger: GACAAGTTTTTCAACGAGCCAAGAACTCAGCACCCT...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAATAATAAAAACCTGCTaGCGTGCTTCCAGACCATCC +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGIIKTC*RASRPS
Trigger: GGATGGTCTGGAAGCACGCCAGCAGGTTTTTATTAT...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGATAATAAAAACCTGCTaGCGTGCTTCCAGACCATCC +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEIIKTC*RASRPS
Trigger: GGATGGTCTGGAAGCACGCCAGCAGGTTTTTATTAT...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCAGGGTCAATTATATCTaGCCTGTTAGTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFRVNYI*PVSGCH
Trigger: ATGGCAGCCACTAACAGGCCAGATATAATTGACCCT...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGACCATAGTCTATACTaGATGACTCGCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLDHSLY*MTRCLS
Trigger: ACTCAAGCAGCGAGTCATCCAGTATAGACTATGGTC...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340871.8
ENST00000391875.6
ENST00000469968.5
CDS-3UTR TCA 90 bp CCTAGGCATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: PRHISRSNLPARLKAGSNWYTSG*RMCMSI
Trigger: GATGCTCATACACATGCGTCACCCGGAGGTGTACCA...GTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATGCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR TCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATCATTAAGACTCTATTaGCTGCACACATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGSLRLY*LHTLLP
Trigger: AGGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGA...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCATTAAGACTCTATTaGCTGCACACATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFSLRLY*LHTLLP
Trigger: AGGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTTGCATCTGCTCCTCTaGGAGGGGATCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRALHLLL*EGILVS
Trigger: AGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGGAGTTCTTGGCTCGTTaGAAAACTTGTCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLEFLAR*KTCRTA
Trigger: TGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTC...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTGAGTTCTTGGCTCGTTaGAAAACTTGTCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPAEFLAR*KTCRTA
Trigger: TGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTC...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCGAGTTCTTGGCTCGTTaGAAAACTTGTCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSEFLAR*KTCRTA
Trigger: TGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTC...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGTATCACACAGGGTGCTaGGTTCTTGGCTCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMYHTGC*VLGSLK
Trigger: TTTCAACGAGCCAAGAACTCAGCACCCTGTGTGATA...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTT +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPISVSS*FTTRTL
Trigger: AAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGAT...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPANKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTACTGGATGACTCGCTaGTTGAGTTTATTATCCACG +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFYWMTR*LSLLST
Trigger: CGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTACTGGATGACTCGCTaGTTGAGTTTATTATCCACG +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRYWMTR*LSLLST
Trigger: CGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGCTCTTCACCTTGTCTTaGCCTTTTTGCCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLLFTLS*PFCQMF
Trigger: GAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAG...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLSSLSF*SDSPDT
Trigger: AGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTATTCAGATCATCCATaGAGGTTAGGAGTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRYSDHP*RLGVGL
Trigger: TAGCCCAACTCCTAACCTGCATGGATGATCTGAATA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATATTCAGATCATCCATaGAGGTTAGGAGTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGYSDHP*RLGVGL
Trigger: TAGCCCAACTCCTAACCTGCATGGATGATCTGAATA...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTATTCAGATCATCCATaGAGGTTAGGAGTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFYSDHP*RLGVGL
Trigger: TAGCCCAACTCCTAACCTGCATGGATGATCTGAATA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGCACAGTCCTTGCATCTaGTCCTCTGAGAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAHSPCI*SSERGS
Trigger: AGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTG...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGCCATAATAAAAACCTaGTGGCGTGCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMAIIKT*WRASRP
Trigger: TGGTCTGGAAGCACGCCAGCAGGTTTTTATTATGGC...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGCGGCTGAGGGACTCCTaGAAACGTTCATACATGATT +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMRLRDS*KRSYMI
Trigger: AATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCG...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCGAACCCTGCAGGTCTaGGCTTCATCGCGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQRTLQV*ASSRRS
Trigger: AGACCGACGCGATGAAGCCCAGACCTGCAGGGTTCG...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTTACTGGTAAGGTACTaGATGACTCGCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSALLVRY*MTRCLS
Trigger: ACTCAAGCAGCGAGTCATCCAGTACCTTACCAGTAA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTTCACGTTGGAGATCTaGAATTCTAACCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLFTLEI*NSNPLA
Trigger: AGCCAGGGGGTTAGAATTCCAGATCTCCAACGTGAA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGATGCAGGTTAGGAGTTaGGCTACAATTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPMQVRS*ATILRS
Trigger: GGAACGAAGAATTGTAGCCCAACTCCTAACCTGCAT...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTATGCAGGTTAGGAGTTaGGCTACAATTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPMQVRS*ATILRS
Trigger: GGAACGAAGAATTGTAGCCCAACTCCTAACCTGCAT...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGGACTCCTTTAGATaGCAAATCTTCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRLDSFR*QIFHFR
Trigger: CCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCTGGACTCCTTTAGATaGCAAATCTTCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFLDSFR*QIFHFR
Trigger: CCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCTTTTGGCAGAGGGTTaGACTGAGGATAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPALLAEG*TEDRAT
Trigger: TGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAG...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGCAAAGCCTTCCCTTTTaGCAGAGGGTTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAQSLPF*QRVGLR
Trigger: CCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTG...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTAGGGTGCTGAGTTCTTaGCTCGTTGAAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSRVLSS*LVEKLV
Trigger: GACAAGTTTTTCAACGAGCCAAGAACTCAGCACCCT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTAGGGTCAATTATATCTaGCCTGTTAGTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSRVNYI*PVSGCH
Trigger: ATGGCAGCCACTAACAGGCCAGATATAATTGACCCT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGACAAGGCTGGCCAGATaGGAAGAATCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLTRLAR*EESSAS
Trigger: TGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTACAAGGCTGGCCAGATaGGAAGAATCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPATRLAR*EESSAS
Trigger: TGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGT...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGATTTTCACACAAGGCTaGCCAGATGGGAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLIFTQG*PDGKNL
Trigger: AAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAATTTTCACACAAGGCTaGCCAGATGGGAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGIFTQG*PDGKNL
Trigger: AAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCAGGGAACTGTTCATGTaGTTTGCTGACTGTGGATCT +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSRELFM*FADCGS
Trigger: AGATCCACAGTCAGCAAATCACATGAACAGTTCCCT...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGACTTATCCGTGGTGTTaGAGAGGTGGTTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLTYPWC*RGGFSL
Trigger: CAAAGAGAAACCACCTCTTCAACACCACGGATAAGT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGGGTGACGCATGTGTATaGGCATCTTGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAGDACV*ASCRPL
Trigger: AAGAGGTCTGCAAGATGCTCATACACATGCGTCACC...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCAGAAATCAAAAGCTTaGGGAAGCCTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLQKSKA*GSLSFL
Trigger: CAGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTG...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGTCATTAAGACTCTATTaGCTGCACACATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPSLRLY*LHTLLP
Trigger: AGGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGA...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTT +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSISVSS*FTTRTL
Trigger: AAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGAT...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GAGACATCACCGGCTGAGGGACTCCTGCAAACGTTCATACATGATTTGATCCTTGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ETSPAEGLLQTFIHDLILAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...AAGGATCAAATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCGGTGATGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481213.5
CDS-3UTR GCA 90 bp CTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGATTAGTAGCTCCAATTATCCACGAACCCTaGAGGTCTGGGCTTCATCGC +
Preference number: 4 (lower is better)
Translates to: LPARLKAGSNESGRLVAPIIHEP*RSGLHR
Trigger: GCGATGAAGCCCAGACCTGCAGGGTTCGTGGATAAT...TGGAGCTACTAATCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR GCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTTACTGGATGACTCGCTaGTTGAGTTTATTATCCACG +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPYWMTR*LSLLST
Trigger: CGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTA...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCTCTTCACCTTGTCTTaGCCTTTTTGCCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLLFTLS*PFCQMF
Trigger: GAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAG...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGCTCTTCACCTTGTCTTaGCCTTTTTGCCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGLFTLS*PFCQMF
Trigger: GAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAG...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCTCTTCACCTTGTCTTaGCCTTTTTGCCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSLFTLS*PFCQMF
Trigger: GAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTTATTCAGATCATCCATaGAGGTTAGGAGTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSYSDHP*RLGVGL
Trigger: TAGCCCAACTCCTAACCTGCATGGATGATCTGAATA...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGAATCATTCAGTTCAATaGACAGTCCTTGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLENHSVQ*TVLASA
Trigger: AGCAGATGCAAGGACTGTGCATTGAACTGAATGATT...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCAAATTTACATCTaGATCCAGTGGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGFQIYI*IQWWFG
Trigger: ACCAAACCACCACTGGATGCAGATGTAAATTTGGAA...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTTCCAAATTTACATCTaGATCCAGTGGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRFQIYI*IQWWFG
Trigger: ACCAAACCACCACTGGATGCAGATGTAAATTTGGAA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGAAGGTCACCAGCAATTaGTTCCAAATTTACATCTGC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRKVTSN*FQIYIC
Trigger: GCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTT...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTCCACTCTTCTGTCTTaGCATTTCCTGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRASTLLS*HFLSQG
Trigger: GCCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTTACTGGTAAGGTACTaGATGACTCGCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLLLVRY*MTRCLS
Trigger: ACTCAAGCAGCGAGTCATCCAGTACCTTACCAGTAA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCTTCAAACTTCACGTTaGAGATCTGGAATTCTAACC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFLQTSR*RSGILT
Trigger: GGTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGACTTCAAACTTCACGTTaGAGATCTGGAATTCTAACC +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGLQTSR*RSGILT
Trigger: GGTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAG...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGCTTCAAACTTCACGTTaGAGATCTGGAATTCTAACC +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLLQTSR*RSGILT
Trigger: GGTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAG...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSASRHNL*SSHFQN
Trigger: ATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPSRHNL*SSHFQN
Trigger: ATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPSRHNL*SSHFQN
Trigger: ATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCATGCAGGTTAGGAGTTaGGCTACAATTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSMQVRS*ATILRS
Trigger: GGAACGAAGAATTGTAGCCCAACTCCTAACCTGCAT...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGCTGGACTCCTTTAGATaGCAAATCTTCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPLDSFR*QIFHFR
Trigger: CCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAG...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCTGGACTCCTTTAGATaGCAAATCTTCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLLDSFR*QIFHFR
Trigger: CCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAG...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGCCTGTGTTTCAGAAGTaGGCTCAGTTCCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAPVFQK*AQFPAF
Trigger: AAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGG...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGAGCTTTGAACTGGTCTaGGTTGCGTACTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRASFELV*VAYWCQ
Trigger: TTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCT...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCAGGGTGCTGAGTTCTTaGCTCGTTGAAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSRVLSS*LVEKLV
Trigger: GACAAGTTTTTCAACGAGCCAAGAACTCAGCACCCT...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATAATAAAAACCTGCTaGCGTGCTTCCAGACCATCC +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLIIKTC*RASRPS
Trigger: GGATGGTCTGGAAGCACGCCAGCAGGTTTTTATTAT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGAGGGTCAATTATATCTaGCCTGTTAGTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLRVNYI*PVSGCH
Trigger: ATGGCAGCCACTAACAGGCCAGATATAATTGACCCT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTACATCTGCATCCAGTaGTGGTTTGGTACCATTTTT +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRYICIQ*WFGTIF
Trigger: AAAAATGGTACCAAACCACCACTGGATGCAGATGTA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGTCCTTCAGAGCGTGTaGGGGATTCTCTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQVLQSV*GILCRL
Trigger: AAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGAC...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGATTTTCACACAAGGCTaGCCAGATGGGAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLIFTQG*PDGKNL
Trigger: AAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTGACCATAGTCTATACTaGATGACTCGCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPADHSLY*MTRCLS
Trigger: ACTCAAGCAGCGAGTCATCCAGTATAGACTATGGTC...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340871.8
ENST00000391875.6
ENST00000469968.5
CDS-3UTR TCA 90 bp TCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGAAGGGAACTGTTCATGTaGTTTGCTGACTGTGGATCT +
Preference number: 4 (lower is better)
Translates to: SRSNLPARLKAGSNESGRRELFM*FADCGS
Trigger: AGATCCACAGTCAGCAAATCACATGAACAGTTCCCT...TCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR TCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQWYTSG*RMCMSI
Trigger: GATGCTCATACACATGCGTCACCCGGAGGTGTACCA...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTTTCTGCACAATGTTTaGAGTATTCTTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLFLHNV*SILSLD
Trigger: ATCCAGGGAAAGAATACTTCAAACATTGTGCAGAAA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCAGAAATCAAAAGCTTaGGGAAGCCTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLQKSKA*GSLSFL
Trigger: CAGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCAGAAATCAAAAGCTTaGGGAAGCCTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPAQKSKA*GSLSFL
Trigger: CAGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTG...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGCAGAAATCAAAAGCTTaGGGAAGCCTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMQKSKA*GSLSFL
Trigger: CAGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTG...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCTCATTAAGACTCTATTaGCTGCACACATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSSLRLY*LHTLLP
Trigger: AGGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGA...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTATCACACAGGGTGCTaGGTTCTTGGCTCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAYHTGC*VLGSLK
Trigger: TTTCAACGAGCCAAGAACTCAGCACCCTGTGTGATA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCGGAGACATCACCGGCTaGGGGACTCCTGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSGDITG*GTPANV
Trigger: AACGTTTGCAGGAGTCCCTCAGCCGGTGATGTCTCC...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGCTCTTCACCTTGTCTTaGCCTTTTTGCCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMLFTLS*PFCQMF
Trigger: GAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAG...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRASSLSF*SDSPDT
Trigger: AGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACT...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGGAAGCCTCAGTTTTCTaGACAATGTTTGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSREASVF*TMFEVF
Trigger: GAATACTTCAAACATTGTGCAGAAAACTGAGGCTTC...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCGAAGCCTCAGTTTTCTaGACAATGTTTGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFEASVF*TMFEVF
Trigger: GAATACTTCAAACATTGTGCAGAAAACTGAGGCTTC...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGACTGCACACATTGCTaGCTCTCGGCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQDCTHC*LSAQCH
Trigger: ATGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTC...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTCAGGATTTTTCTTCTaGTGTTCCTGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRSGFFF*CSCSFI
Trigger: AATGAAGCTACAGGAACAGCAGAAGAAAAATCCTGA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATCAGGATTTTTCTTCTaGTGTTCCTGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGSGFFF*CSCSFI
Trigger: AATGAAGCTACAGGAACAGCAGAAGAAAAATCCTGA...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTCAGGATTTTTCTTCTaGTGTTCCTGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLSGFFF*CSCSFI
Trigger: AATGAAGCTACAGGAACAGCAGAAGAAAAATCCTGA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCAGGATTTTTCTTCTaGTGTTCCTGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFSGFFF*CSCSFI
Trigger: AATGAAGCTACAGGAACAGCAGAAGAAAAATCCTGA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGAATCATTCAGTTCAATaGACAGTCCTTGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPNHSVQ*TVLASA
Trigger: AGCAGATGCAAGGACTGTGCATTGAACTGAATGATT...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTAATCATTCAGTTCAATaGACAGTCCTTGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPNHSVQ*TVLASA
Trigger: AGCAGATGCAAGGACTGTGCATTGAACTGAATGATT...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGGCCATAATAAAAACCTaGTGGCGTGCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAAIIKT*WRASRP
Trigger: TGGTCTGGAAGCACGCCAGCAGGTTTTTATTATGGC...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGCCCGGGCGCAGGATTaGAGGGTCAATTATATCTGG +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQARAQD*RVNYIW
Trigger: CCAGATATAATTGACCCTGCAATCCTGCGCCCGGGC...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGTTCCAAATTTACATCTaGATCCAGTGGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGFQIYI*IQWWFG
Trigger: ACCAAACCACCACTGGATGCAGATGTAAATTTGGAA...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCAAGGTCACCAGCAATTaGTTCCAAATTTACATCTGC +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSAKVTSN*FQIYIC
Trigger: GCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTT...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGTGTGGGGGATTCTCTaGCGGCTTGATGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLVWGIL*RLDGLA
Trigger: AGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTGTGTGGGGGATTCTCTaGCGGCTTGATGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLVWGIL*RLDGLA
Trigger: AGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGACGAACCCTGCAGGTCTaGGCTTCATCGCGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGRTLQV*ASSRRS
Trigger: AGACCGACGCGATGAAGCCCAGACCTGCAGGGTTCG...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR CCA 90 bp AGGATCGCTTGGGCCTGGGACGTCAAGACTGCGGTAAGCCATGATTGTGCCAGTTTACTGGTAAGGTACTaGATGACTCGCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: RIAWAWDVKTAVSHDCASLLVRY*MTRCLS
Trigger: ACTCAAGCAGCGAGTCATCCAGTACCTTACCAGTAA...ACTGGCACAATCATGGCTTACCGCAGTCTTGACGTCCCAGGCCCAAGCGATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR CCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGCTTCAAACTTCACGTTaGAGATCTGGAATTCTAACC +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGLQTSR*RSGILT
Trigger: GGTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAG...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ACCCGGGCTGTAGCAGCCACATTATTCAGATCATCCATGCAGGTTAGGAGTTGGTGTCTTCCCACAGCCTaGTGGTCCATGAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: TRAVAATLFRSSMQVRSWCLPTA*WSMKEN
Trigger: GTTCTCCTTCATGGACCACCAGGCTGTGGGAAGACA...CCAACTCCTAACCTGCATGGATGATCTGAATAATGTGGCTGCTACAGCCCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSSRHNL*SSHFQN
Trigger: ATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMSRHNL*SSHFQN
Trigger: ATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCTGGACTCCTTTAGATaGCAAATCTTCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPALDSFR*QIFHFR
Trigger: CCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAG...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCTGGACTCCTTTAGATaGCAAATCTTCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLLDSFR*QIFHFR
Trigger: CCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTTACATCTGCATCCAGTaGTGGTTTGGTACCATTTTT +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSYICIQ*WFGTIF
Trigger: AAAAATGGTACCAAACCACCACTGGATGCAGATGTA...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTCCTTCAGAGCGTGTaGGGGATTCTCTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASVLQSV*GILCRL
Trigger: AAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGAC...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATTTTCACACAAGGCTaGCCAGATGGGAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLIFTQG*PDGKNL
Trigger: AAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGGTAGTCTTCCATACTTaGATCATCATCAGAATAGCT +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLVVFHT*IIIRIA
Trigger: AGCTATTCTGATGATGATTCAAGTATGGAAGACTAC...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCATCTCAGGAGTATTTaGAACAGAATCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPAHLRSI*NRIRIS
Trigger: GGAAATCCTGATTCTGTTTCAAATACTCCTGAGATG...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGCATCTCAGGAGTATTTaGAACAGAATCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMHLRSI*NRIRIS
Trigger: GGAAATCCTGATTCTGTTTCAAATACTCCTGAGATG...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCATCTCAGGAGTATTTaGAACAGAATCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSHLRSI*NRIRIS
Trigger: GGAAATCCTGATTCTGTTTCAAATACTCCTGAGATG...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGTCTCCATCTACTTCCTaGAGATCTTCTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMSPSTS*RSSFFL
Trigger: AAGGAAGAAAGAAGATCTTCAGGAAGTAGATGGAGA...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLWYTSG*RMCMSI
Trigger: GATGCTCATACACATGCGTCACCCGGAGGTGTACCA...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTTTCTGCACAATGTTTaGAGTATTCTTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSAFLHNV*SILSLD
Trigger: ATCCAGGGAAAGAATACTTCAAACATTGTGCAGAAA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCACTCGGCACAGTGCCATaGGATCAGCACCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASLGTVP*DQHQQS
Trigger: GCTTTGTTGGTGCTGATCTCATGGCACTGTGCCGAG...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSDSLPA*WASSSK
Trigger: CTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATC...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGATTCTCTGCCGGCTTaGTGGGCTAGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLDSLPA*WASSSK
Trigger: CTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATC...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCGCGCCTGTGTCCAGCTaGAAGTGGGTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFAPVSS*KWVLQS
Trigger: GCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGC...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGAAGAGAAGAATCTTTTaGATCCTGTGGATCTGGGTA +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLKRRIF*ILWIWV
Trigger: TACCCAGATCCACAGGATTCAAAAGATTCTTCTCTT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469075.5
ENST00000469968.5
CDS-3UTR TCA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTAAGAGAAGAATCTTTTaGATCCTGTGGATCTGGGTA +
Preference number: 4 (lower is better)
Translates to: CVQLKVGPSERVGDSLPAKRRIF*ILWIWV
Trigger: TACCCAGATCCACAGGATTCAAAAGATTCTTCTCTT...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469075.5
ENST00000469968.5
CDS-3UTR GCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGATTATCCACGAACCCTaGAGGTCTGGGCTTCATCGC +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQIIHEP*RSGLHR
Trigger: GCGATGAAGCCCAGACCTGCAGGGTTCGTGGATAAT...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTTTATTCTTTAGCTTaGCTTTCCGTTTCATATCAC +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRLYSLA*LSVSYH
Trigger: GTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCCTTTATTCTTTAGCTTaGCTTTCCGTTTCATATCAC +
Preference number: 4 (lower is better)
Translates to: RPRLCPAESGSFRACGGFLYSLA*LSVSYH
Trigger: GTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAG...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTTAATGTCATATCATTaGCTCCCACATCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRLMSYH*LPHLQT
Trigger: AGTTTGAAGATGTGGGAGGCAATGATATGACATTAA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTAATGTCATATCATTaGCTCCCACATCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: MRPRLCPAESGSFRACGGLMSYH*LPHLQT
Trigger: AGTTTGAAGATGTGGGAGGCAATGATATGACATTAA...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGATTAGTAGCTCCAAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACT +
Preference number: 4 (lower is better)
Translates to: LPARLKAGSNESGRLVAPSSLSF*SDSPDT
Trigger: AGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACT...TGGAGCTACTAATCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR GCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGAAGCCTCAGTTTTCTaGACAATGTTTGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSAEASVF*TMFEVF
Trigger: GAATACTTCAAACATTGTGCAGAAAACTGAGGCTTC...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGAAGCCTCAGTTTTCTaGACAATGTTTGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: YMRPRLCPAESGSFRACGEASVF*TMFEVF
Trigger: GAATACTTCAAACATTGTGCAGAAAACTGAGGCTTC...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCATGCCTCTCGGCACAGTaGCATGAGATCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASCLSAQ*HEISTN
Trigger: GTTGGTGCTGATCTCATGGCACTGTGCCGAGAGGCA...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGACTGCACACATTGCTaGCTCTCGGCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASDCTHC*LSAQCH
Trigger: ATGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTC...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGTCAGGATTTTTCTTCTaGTGTTCCTGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLSGFFF*CSCSFI
Trigger: AATGAAGCTACAGGAACAGCAGAAGAAAAATCCTGA...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCAATCATTCAGTTCAATaGACAGTCCTTGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSNHSVQ*TVLASA
Trigger: AGCAGATGCAAGGACTGTGCATTGAACTGAATGATT...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCGCCCGGGCGCAGGATTaGAGGGTCAATTATATCTGG +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSARAQD*RVNYIW
Trigger: CCAGATATAATTGACCCTGCAATCCTGCGCCCGGGC...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGCCCGGGCGCAGGATTaGAGGGTCAATTATATCTGG +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLARAQD*RVNYIW
Trigger: CCAGATATAATTGACCCTGCAATCCTGCGCCCGGGC...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGTTCCAAATTTACATCTaGATCCAGTGGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMFQIYI*IQWWFG
Trigger: ACCAAACCACCACTGGATGCAGATGTAAATTTGGAA...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGAAGGTCACCAGCAATTaGTTCCAAATTTACATCTGC +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMKVTSN*FQIYIC
Trigger: GCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTT...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGGAATGGAGCCTGTTTTaGAACTTATCCGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAEWSLF*NLSVVL
Trigger: CAACACCACGGATAAGTTCCAAAACAGGCTCCATTC...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGGTCTTTCTTTACACTTaGGGTTTTGTCAATAAACCA +
Preference number: 4 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEVFLYT*GFVNKP
Trigger: TGGTTTATTGACAAAACCCCAAGTGTAAAGAAAGAC...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGCTTCAAACTTCACGTTaGAGATCTGGAATTCTAACC +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMLQTSR*RSGILT
Trigger: GGTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAG...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGCTTCCCACAGCCTGGTaGTCCATGAAGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLLPTAW*SMKENS
Trigger: GGAGTTCTCCTTCATGGACCACCAGGCTGTGGGAAG...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTGTCTTCCCACAGCCTaGTGGTCCATGAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQCLPTA*WSMKEN
Trigger: GTTCTCCTTCATGGACCACCAGGCTGTGGGAAGACA...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQSERGS*SLSNPS
Trigger: GCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGA...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTAAGGAGGACCCCAGCTaGAGTCACCAATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLKEDPS*SHQSKS
Trigger: GCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCAAGGAGGACCCCAGCTaGAGTCACCAATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSKEDPS*SHQSKS
Trigger: GCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTT...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGAGGGTCAATTATATCTaGCCTGTTAGTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRARVNYI*PVSGCH
Trigger: ATGGCAGCCACTAACAGGCCAGATATAATTGACCCT...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCTACATCTGCATCCAGTaGTGGTTTGGTACCATTTTT +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSYICIQ*WFGTIF
Trigger: AAAAATGGTACCAAACCACCACTGGATGCAGATGTA...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTACATCTGCATCCAGTaGTGGTTTGGTACCATTTTT +
Preference number: 4 (lower is better)
Translates to: CPAESGSFRACGGFSAGLYICIQ*WFGTIF
Trigger: AAAAATGGTACCAAACCACCACTGGATGCAGATGTA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGGACCATAGTCTATACTaGATGACTCGCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRADHSLY*MTRCLS
Trigger: ACTCAAGCAGCGAGTCATCCAGTATAGACTATGGTC...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340871.8
ENST00000391875.6
ENST00000469968.5
CDS-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCGTAGTCTTCCATACTTaGATCATCATCAGAATAGCT +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSVVFHT*IIIRIA
Trigger: AGCTATTCTGATGATGATTCAAGTATGGAAGACTAC...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCTTTCTGCACAATGTTTaGAGTATTCTTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSFLHNV*SILSLD
Trigger: ATCCAGGGAAAGAATACTTCAAACATTGTGCAGAAA...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGTTTCTGCACAATGTTTaGAGTATTCTTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PAESGSFRACGGFSAGLMFLHNV*SILSLD
Trigger: ATCCAGGGAAAGAATACTTCAAACATTGTGCAGAAA...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTCTCGGCACAGTGCCATaGGATCAGCACCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLLGTVP*DQHQQS
Trigger: GCTTTGTTGGTGCTGATCTCATGGCACTGTGCCGAG...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCGGAGACATCACCGGCTaGGGGACTCCTGCAAACGTT +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFGDITG*GTPANV
Trigger: AACGTTTGCAGGAGTCCCTCAGCCGGTGATGTCTCC...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTACTGGATGACTCGCTaGTTGAGTTTATTATCCACG +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAYWMTR*LSLLST
Trigger: CGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCTTTATTCTTTAGCTTaGCTTTCCGTTTCATATCAC +
Preference number: 4 (lower is better)
Translates to: PRLCPAESGSFRACGGFSLYSLA*LSVSYH
Trigger: GTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCTTTATTCTTTAGCTTaGCTTTCCGTTTCATATCAC +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSALYSLA*LSVSYH
Trigger: GTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGTTAATGTCATATCATTaGCTCCCACATCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: RACVQLKVGPSERVGDSLLMSYH*LPHLQT
Trigger: AGTTTGAAGATGTGGGAGGCAATGATATGACATTAA...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTTAATGTCATATCATTaGCTCCCACATCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: RLCPAESGSFRACGGFSALMSYH*LPHLQT
Trigger: AGTTTGAAGATGTGGGAGGCAATGATATGACATTAA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTTTAATGTCATATCATTaGCTCCCACATCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPLMSYH*LPHLQT
Trigger: AGTTTGAAGATGTGGGAGGCAATGATATGACATTAA...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCATTGACTGCACACATTaGTGCCTCTCGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSIDCTH*CLSAQC
Trigger: GCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAAT...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCACAGTCCTTGCATCTaGTCCTCTGAGAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLHSPCI*SSERGS
Trigger: AGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTG...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCGTGTGGGGGATTCTCTaGCGGCTTGATGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFVWGIL*RLDGLA
Trigger: AGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTGTCTTTCTTTACACTTaGGGTTTTGTCAATAAACCA +
Preference number: 4 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPVFLYT*GFVNKP
Trigger: TGGTTTATTGACAAAACCCCAAGTGTAAAGAAAGAC...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSSERGS*SLSNPS
Trigger: GCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGA...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCCAAGAGCTTTGAACTaGTCTGGGTTGCGTACTGGT +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQPRALN*SGLRTG
Trigger: ACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGG...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AGGATCGCTTGGGCCTGGGACGTCAAGACTGCGGTAAGCCATGATTGTGCCAGTGTAGTCTTCCATACTTaGATCATCATCAGAATAGCT +
Preference number: 4 (lower is better)
Translates to: RIAWAWDVKTAVSHDCASVVFHT*IIIRIA
Trigger: AGCTATTCTGATGATGATTCAAGTATGGAAGACTAC...ACTGGCACAATCATGGCTTACCGCAGTCTTGACGTCCCAGGCCCAAGCGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR TCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTCTCCATCTACTTCCTaGAGATCTTCTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRASPSTS*RSSFFL
Trigger: AAGGAAGAAAGAAGATCTTCAGGAAGTAGATGGAGA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCCTCGGCACAGTGCCATaGGATCAGCACCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFLGTVP*DQHQQS
Trigger: GCTTTGTTGGTGCTGATCTCATGGCACTGTGCCGAG...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGCCAATCCAAGAGCTTTaGACTGGTCTGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLPIQEL*TGLGCV
Trigger: TACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGG...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GTGCATTTGACACAGCTTGCTCAAATAGTTCTCTCAGCTTCTGCTCAGACTCTCGGTGACGCATGTGTATaGGCATCTTGCAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: VHLTQLAQIVLSASAQTLGDACV*ASCRPP
Trigger: AGGAGGTCTGCAAGATGCTCATACACATGCGTCACC...GAGAGTCTGAGCAGAAGCTGAGAGAACTATTTGAGCAAGCTGTGTCAAATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR GCA 90 bp ATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGATCGCTTGGGCCTCTTCACCTTGTCTTaGCCTTTTTGCCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: IRIAFSIPVRLRWEDRLGLFTLS*PFCQMF
Trigger: GAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAG...GCCCAAGCGATCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR GCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCGACTGCACACATTGCTaGCTCTCGGCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFDCTHC*LSAQCH
Trigger: ATGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTC...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTTCAATGCACAGTCCTTaGATCTGCTCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLSMHSP*ICSSER
Trigger: CCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGA...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCACAGGGCACCAATATCTaGCCATGTCACATTAGGGAC +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASQGTNI*PCHIRD
Trigger: GTCCCTAATGTGACATGGGCAGATATTGGTGCCCTG...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAAAAAACCTGCTGGCGTaGTTCCAGACCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASKNLLA*FQTIHL
Trigger: GAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTT...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTAAAAACCTGCTGGCGTaGTTCCAGACCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLKNLLA*FQTIHL
Trigger: GAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGCCATAATAAAAACCTaGTGGCGTGCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQAIIKT*WRASRP
Trigger: TGGTCTGGAAGCACGCCAGCAGGTTTTTATTATGGC...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTTCCACTCTTCTGTCTTaGCATTTCCTGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLSTLLS*HFLSQG
Trigger: GCCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGA...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp CATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTTTACTGGTAAGGTACTaGATGACTCGCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: HISRSNLPARLKAGSNESLLVRY*MTRCLS
Trigger: ACTCAAGCAGCGAGTCATCCAGTACCTTACCAGTAA...AGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CCA 90 bp CCAATAACTAGGACCCGGGCTGTAGCAGCCACATTATTCAGATCATCCATGCAGCTCCTTCAGAATCTTTaGCAGGGGTCTTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PITRTRAVAATLFRSSMQLLQNL*QGSSRE
Trigger: TTCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAG...CTGCATGGATGATCTGAATAATGTGGCTGCTACAGCCCGGGTCCTAGTTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CCA 90 bp CTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGATTAGTAGCTCCATCCAGACACAATCTCTaGAGCAGCCACTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LPARLKAGSNESGRLVAPSRHNL*SSHFQN
Trigger: ATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA...TGGAGCTACTAATCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CCA 90 bp CTTCTGCTCAGACTCTCCGGATACTCCAGACACAATCTCTGGAGCAGCCACTTTATGCAGGTTAGGAGTTaGGCTACAATTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: LLLRLSGYSRHNLWSSHFMQVRS*ATILRS
Trigger: GGAACGAAGAATTGTAGCCCAACTCCTAACCTGCAT...AAAGTGGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAGTCTGAGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSPSLSS*TPLDGK
Trigger: TTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGG...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLPSLSS*TPLDGK
Trigger: TTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGG...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGCCTGTGTTTCAGAAGTaGGCTCAGTTCCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLPVFQK*AQFPAF
Trigger: AAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGG...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTCTGGGTTGCGTACTaGTGCCAATATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASVWVAY*CQYCHG
Trigger: ACCATGGCAATATTGGCACCAGTACGCAACCCAGAC...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTGTCTGGGTTGCGTACTaGTGCCAATATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLVWVAY*CQYCHG
Trigger: ACCATGGCAATATTGGCACCAGTACGCAACCCAGAC...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGCCAAGAGCTTTGAACTaGTCTGGGTTGCGTACTGGT +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLPRALN*SGLRTG
Trigger: ACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGG...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCCCAAGAGCTTTGAACTaGTCTGGGTTGCGTACTGGT +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSPRALN*SGLRTG
Trigger: ACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGG...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTACATCTGCATCCAGTaGTGGTTTGGTACCATTTTT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAYICIQ*WFGTIF
Trigger: AAAAATGGTACCAAACCACCACTGGATGCAGATGTA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGGTAGTCTTCCATACTTaGATCATCATCAGAATAGCT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAVVFHT*IIIRIA
Trigger: AGCTATTCTGATGATGATTCAAGTATGGAAGACTAC...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGAGGGAACTGTTCATGTaGTTTGCTGACTGTGGATCT +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQRELFM*FADCGS
Trigger: AGATCCACAGTCAGCAAATCACATGAACAGTTCCCT...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp AGGCATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGCATCTCAGGAGTATTTaGAACAGAATCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: RHISRSNLPARLKAGSNEHLRSI*NRIRIS
Trigger: GGAAATCCTGATTCTGTTTCAAATACTCCTGAGATG...CTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR TCA 90 bp CTCTCCGGATACTCCAGACACAATCTCTGGAGCAGCCACTTTCAAAATTGGCAGACTTATCCGTGGTGTTaGAGAGGTGGTTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSGYSRHNLWSSHFQNWQTYPWC*RGGFSL
Trigger: CAAAGAGAAACCACCTCTTCAACACCACGGATAAGT...CTGCCAATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR TCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGTGACGCATGTGTATaGGCATCTTGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLGDACV*ASCRPL
Trigger: AAGAGGTCTGCAAGATGCTCATACACATGCGTCACC...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTTTCTGCACAATGTTTaGAGTATTCTTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAFLHNV*SILSLD
Trigger: ATCCAGGGAAAGAATACTTCAAACATTGTGCAGAAA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLNKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSNKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GAGACATCACCGGCTGAGGGACTCCTGCAAACGTTCATACATGATTTGATCCTTAATAAAATGTTTACATaGGGCCGCGCCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ETSPAEGLLQTFIHDLILNKMFT*GRACVQ
Trigger: CTGGACACAGGCGCGGCCTCATGTAAACATTTTATT...AAGGATCAAATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCGGTGATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481213.5
CDS-3UTR TCA 90 bp ATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGATCGCTTGGGCAAGAGAAGAATCTTTTaGATCCTGTGGATCTGGGTA +
Preference number: 4 (lower is better)
Translates to: IRIAFSIPVRLRWEDRLGKRRIF*ILWIWV
Trigger: TACCCAGATCCACAGGATTCAAAAGATTCTTCTCTT...GCCCAAGCGATCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR GCA 90 bp CATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTCTCTTCACCTTGTCTTaGCCTTTTTGCCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: HISRSNLPARLKAGSNESLFTLS*PFCQMF
Trigger: GAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAG...AGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR GCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAAGTTCTCTCAGCTTCTaGTCAGACTCTCCGGATACT +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASSSLSF*SDSPDT
Trigger: AGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGAACT...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTTCAATGCACAGTCCTTaGATCTGCTCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLSMHSP*ICSSER
Trigger: CCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGA...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTTACTGGTGCCAATATTaGCATGGTGAGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLYWCQY*HGELLS
Trigger: AGAGAGGAGCTCACCATGGCAATATTGGCACCAGTA...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCGGCTGAGGGACTCCTaGAAACGTTCATACATGATT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLRLRDS*KRSYMI
Trigger: AATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCG...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGCGGCTGAGGGACTCCTaGAAACGTTCATACATGATT +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLRLRDS*KRSYMI
Trigger: AATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCG...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGTCGATTAGTAGCTCCAATAACTAGGACCCGGGCTGTAGCAGCCACATTATTCGAATGGAGCCTGTTTTaGAACTTATCCGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GRLVAPITRTRAVAATLFEWSLF*NLSVVL
Trigger: CAACACCACGGATAAGTTCCAAAACAGGCTCCATTC...GAATAATGTGGCTGCTACAGCCCGGGTCCTAGTTATTGGAGCTACTAATCGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGAATGGAGCCTGTTTTaGAACTTATCCGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQEWSLF*NLSVVL
Trigger: CAACACCACGGATAAGTTCCAAAACAGGCTCCATTC...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCACGTTGGAGATCTaGAATTCTAACCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSFTLEI*NSNPLA
Trigger: AGCCAGGGGGTTAGAATTCCAGATCTCCAACGTGAA...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCATTCACGTTGGAGATCTaGAATTCTAACCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASFTLEI*NSNPLA
Trigger: AGCCAGGGGGTTAGAATTCCAGATCTCCAACGTGAA...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGATGCAGGTTAGGAGTTaGGCTACAATTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQMQVRS*ATILRS
Trigger: GGAACGAAGAATTGTAGCCCAACTCCTAACCTGCAT...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCCAAAGCCTTCCCTTTTaGCAGAGGGTTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFQSLPF*QRVGLR
Trigger: CCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTG...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTAGCTTTGAACTGGTCTaGGTTGCGTACTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLSFELV*VAYWCQ
Trigger: TTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCT...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGACAAGGCTGGCCAGATaGGAAGAATCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLTRLAR*EESSAS
Trigger: TGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGT...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTAGGGAACTGTTCATGTaGTTTGCTGACTGTGGATCT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLRELFM*FADCGS
Trigger: AGATCCACAGTCAGCAAATCACATGAACAGTTCCCT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCACTTATCCGTGGTGTTaGAGAGGTGGTTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSTYPWC*RGGFSL
Trigger: CAAAGAGAAACCACCTCTTCAACACCACGGATAAGT...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR TCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTT +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSISVSS*FTTRTL
Trigger: AAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGAT...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp CTCTCCGGATACTCCAGACACAATCTCTGGAGCAGCCACTTTCAAAATTGGCAGTACTGGATGACTCGCTaGTTGAGTTTATTATCCACG +
Preference number: 4 (lower is better)
Translates to: LSGYSRHNLWSSHFQNWQYWMTR*LSLLST
Trigger: CGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTA...CTGCCAATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR GCA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTTAATGTCATATCATTaGCTCCCACATCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: NVYMRPRLCPAESGSFRALMSYH*LPHLQT
Trigger: AGTTTGAAGATGTGGGAGGCAATGATATGACATTAA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTTACTGGTGCCAATATTaGCATGGTGAGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLYWCQY*HGELLS
Trigger: AGAGAGGAGCTCACCATGGCAATATTGGCACCAGTA...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAAAAACCTGCTGGCGTaGTTCCAGACCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFKNLLA*FQTIHL
Trigger: GAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTT...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQSRHNL*SSHFQN
Trigger: ATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTCTTTTGGCAGAGGGTTaGACTGAGGATAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLLLAEG*TEDRAT
Trigger: TGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAG...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGAGGGTGCTGAGTTCTTaGCTCGTTGAAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLRVLSS*LVEKLV
Trigger: GACAAGTTTTTCAACGAGCCAAGAACTCAGCACCCT...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCATAATAAAAACCTGCTaGCGTGCTTCCAGACCATCC +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSIIKTC*RASRPS
Trigger: GGATGGTCTGGAAGCACGCCAGCAGGTTTTTATTAT...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTATAATAAAAACCTGCTaGCGTGCTTCCAGACCATCC +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLIIKTC*RASRPS
Trigger: GGATGGTCTGGAAGCACGCCAGCAGGTTTTTATTAT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTAGGGTCAATTATATCTaGCCTGTTAGTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLRVNYI*PVSGCH
Trigger: ATGGCAGCCACTAACAGGCCAGATATAATTGACCCT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAAGGGTCAATTATATCTaGCCTGTTAGTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASRVNYI*PVSGCH
Trigger: ATGGCAGCCACTAACAGGCCAGATATAATTGACCCT...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCCAGAAATCAAAAGCTTaGGGAAGCCTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSQKSKA*GSLSFL
Trigger: CAGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTG...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTTACTGGATGACTCGCTaGTTGAGTTTATTATCCACG +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLYWMTR*LSLLST
Trigger: CGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTA...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCTACTGGTGCCAATATTaGCATGGTGAGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFYWCQY*HGELLS
Trigger: AGAGAGGAGCTCACCATGGCAATATTGGCACCAGTA...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCGCCATAATAAAAACCTaGTGGCGTGCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFAIIKT*WRASRP
Trigger: TGGTCTGGAAGCACGCCAGCAGGTTTTTATTATGGC...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTTCCAAATTTACATCTaGATCCAGTGGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQFQIYI*IQWWFG
Trigger: ACCAAACCACCACTGGATGCAGATGTAAATTTGGAA...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGAAGGTCACCAGCAATTaGTTCCAAATTTACATCTGC +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQKVTSN*FQIYIC
Trigger: GCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTT...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCCGGCTGAGGGACTCCTaGAAACGTTCATACATGATT +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFRLRDS*KRSYMI
Trigger: AATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCG...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGAATGGAGCCTGTTTTaGAACTTATCCGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLEWSLF*NLSVVL
Trigger: CAACACCACGGATAAGTTCCAAAACAGGCTCCATTC...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGATTTTCACACAAGGCTaGCCAGATGGGAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLIFTQG*PDGKNL
Trigger: AAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR TCA 90 bp CTCTCCGGATACTCCAGACACAATCTCTGGAGCAGCCACTTTCAAAATTGGCAGGTAGTCTTCCATACTTaGATCATCATCAGAATAGCT +
Preference number: 4 (lower is better)
Translates to: LSGYSRHNLWSSHFQNWQVVFHT*IIIRIA
Trigger: AGCTATTCTGATGATGATTCAAGTATGGAAGACTAC...CTGCCAATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR TCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTTCTCCATCTACTTCCTaGAGATCTTCTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLSPSTS*RSSFFL
Trigger: AAGGAAGAAAGAAGATCTTCAGGAAGTAGATGGAGA...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp GCATTTGACACAGCTTGCTCAAATAGTTCTCTCAGCTTCTGCTCAGACTCTCCGTCTCCATCTACTTCCTaGAGATCTTCTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AFDTACSNSSLSFCSDSPSPSTS*RSSFFL
Trigger: AAGGAAGAAAGAAGATCTTCAGGAAGTAGATGGAGA...CGGAGAGTCTGAGCAGAAGCTGAGAGAACTATTTGAGCAAGCTGTGTCAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR TCA 90 bp CTCTCCGGATACTCCAGACACAATCTCTGGAGCAGCCACTTTCAAAATTGGCAGTTTCTGCACAATGTTTaGAGTATTCTTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LSGYSRHNLWSSHFQNWQFLHNV*SILSLD
Trigger: ATCCAGGGAAAGAATACTTCAAACATTGTGCAGAAA...CTGCCAATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR TCA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTTTCTGCACAATGTTTaGAGTATTCTTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQFLHNV*SILSLD
Trigger: ATCCAGGGAAAGAATACTTCAAACATTGTGCAGAAA...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTTCATTAAGACTCTATTaGCTGCACACATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLSLRLY*LHTLLP
Trigger: AGGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGA...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR TCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTT +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFISVSS*FTTRTL
Trigger: AAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGAT...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGATACTGGATGACTCGCTaGTTGAGTTTATTATCCACG +
Preference number: 4 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGYWMTR*LSLLST
Trigger: CGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTA...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR GCA 90 bp ATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGCTTTATTCTTTAGCTTaGCTTTCCGTTTCATATCAC +
Preference number: 4 (lower is better)
Translates to: IFLGRTFPHVSKQGLTSLLYSLA*LSVSYH
Trigger: GTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAG...CAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR GCA 90 bp GGTCGATTAGTAGCTCCAATAACTAGGACCCGGGCTGTAGCAGCCACATTATTCGAAGCCTCAGTTTTCTaGACAATGTTTGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: GRLVAPITRTRAVAATLFEASVF*TMFEVF
Trigger: GAATACTTCAAACATTGTGCAGAAAACTGAGGCTTC...GAATAATGTGGCTGCTACAGCCCGGGTCCTAGTTATTGGAGCTACTAATCGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR GCA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTAATCATTCAGTTCAATaGACAGTCCTTGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLNHSVQ*TVLASA
Trigger: AGCAGATGCAAGGACTGTGCATTGAACTGAATGATT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGAATCATTCAGTTCAATaGACAGTCCTTGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLNHSVQ*TVLASA
Trigger: AGCAGATGCAAGGACTGTGCATTGAACTGAATGATT...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAAAGGTCACCAGCAATTaGTTCCAAATTTACATCTGC +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASKVTSN*FQIYIC
Trigger: GCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTT...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCTTACTGGTAAGGTACTaGATGACTCGCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFLLVRY*MTRCLS
Trigger: ACTCAAGCAGCGAGTCATCCAGTACCTTACCAGTAA...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCCTTCAAACTTCACGTTaGAGATCTGGAATTCTAACC +
Preference number: 4 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSLQTSR*RSGILT
Trigger: GGTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAG...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCTACTGGATGACTCGCTaGTTGAGTTTATTATCCACG +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFYWMTR*LSLLST
Trigger: CGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTA...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp GGTCGATTAGTAGCTCCAATAACTAGGACCCGGGCTGTAGCAGCCACATTATTCGTCTTTCTTTACACTTaGGGTTTTGTCAATAAACCA +
Preference number: 4 (lower is better)
Translates to: GRLVAPITRTRAVAATLFVFLYT*GFVNKP
Trigger: TGGTTTATTGACAAAACCCCAAGTGTAAAGAAAGAC...GAATAATGTGGCTGCTACAGCCCGGGTCCTAGTTATTGGAGCTACTAATCGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
3UTR CAA 72 bp GAGCGAGACGCTGTTCATTATCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTTCATCTTCTAATTCTG +
Preference number: 4 (lower is better)
Translates to: ERDAVHYPLHLV*PFLPNVHLLIL
Trigger: CAGAATTAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAATGAACAGCGTCTCGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR GCA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGCTTTATTCTTTAGCTTaGCTTTCCGTTTCATATCAC +
Preference number: 4 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLLYSLA*LSVSYH
Trigger: GTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAG...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CCA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTCTTTCTTTACACTTaGGGTTTTGTCAATAAACCA +
Preference number: 4 (lower is better)
Translates to: RHFHTRLARWEESSASASVFLYT*GFVNKP
Trigger: TGGTTTATTGACAAAACCCCAAGTGTAAAGAAAGAC...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR GCA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTCTTTATTCTTTAGCTTaGCTTTCCGTTTCATATCAC +
Preference number: 4 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLLYSLA*LSVSYH
Trigger: GTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAG...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR GCA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGACTTTATTCTTTAGCTTaGCTTTCCGTTTCATATCAC +
Preference number: 4 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGLYSLA*LSVSYH
Trigger: GTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAG...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR GCA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCGAAGCCTCAGTTTTCTaGACAATGTTTGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFEASVF*TMFEVF
Trigger: GAATACTTCAAACATTGTGCAGAAAACTGAGGCTTC...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCCCACAAACAGTGTTTaGTCCAGGCGGCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRPTNSV*SRRPGR
Trigger: GCGCCCGGGCCGCCTGGACAAAACACTGTTTGTGGG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCCCACAAACAGTGTTTaGTCCAGGCGGCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPPTNSV*SRRPGR
Trigger: GCGCCCGGGCCGCCTGGACAAAACACTGTTTGTGGG...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCACAAACAGTGTTTaGTCCAGGCGGCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: RACVQLKVGPSERVGDSLPTNSV*SRRPGR
Trigger: GCGCCCGGGCCGCCTGGACAAAACACTGTTTGTGGG...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCCCACAAACAGTGTTTaGTCCAGGCGGCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSPTNSV*SRRPGR
Trigger: GCGCCCGGGCCGCCTGGACAAAACACTGTTTGTGGG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCACCACTCGGACACTaGCCCCTGTCTCTCGGTCTG +
Preference number: 5 (lower is better)
Translates to: RPRLCPAESGSFRACGGFSPLGH*PLSLGL
Trigger: CAGACCGAGAGACAGGGGCAAGTGTCCGAGTGGTGA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCCCACAAACAGTGTTTaGTCCAGGCGGCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSPTNSV*SRRPGR
Trigger: GCGCCCGGGCCGCCTGGACAAAACACTGTTTGTGGG...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGTCACCACTCGGACACTaGCCCCTGTCTCTCGGTCTG +
Preference number: 5 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPSPLGH*PLSLGL
Trigger: CAGACCGAGAGACAGGGGCAAGTGTCCGAGTGGTGA...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCGGCCCGGGCGCAGGATaGCAGGGTCAATTATATCTG +
Preference number: 5 (lower is better)
Translates to: RPRLCPAESGSFRACGGFGPGAG*QGQLYL
Trigger: CAGATATAATTGACCCTGCAATCCTGCGCCCGGGCC...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGGGCCCGGGCGCAGGATaGCAGGGTCAATTATATCTG +
Preference number: 5 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEGPGAG*QGQLYL
Trigger: CAGATATAATTGACCCTGCAATCCTGCGCCCGGGCC...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTCACCACTCGGACACTaGCCCCTGTCTCTCGGTCTG +
Preference number: 5 (lower is better)
Translates to: CPAESGSFRACGGFSAGLSPLGH*PLSLGL
Trigger: CAGACCGAGAGACAGGGGCAAGTGTCCGAGTGGTGA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGGCCCGGGCGCAGGATaGCAGGGTCAATTATATCTG +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSGPGAG*QGQLYL
Trigger: CAGATATAATTGACCCTGCAATCCTGCGCCCGGGCC...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS TCA 90 bp ACTCCACGAGGGGGCACGACGCCCAGGTGGTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATCTTGCAGACCTCCTTTCTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: TPRGGTTPRWWYTSG*RMCMSILQTSFLLQ
Trigger: CTGCAAAAGAAAGGAGGTCTGCAAGATGCTCATACACATGCGTCACCCGGAGGTGTACCACCACCTGGGCGTCGTGCCCCCTCGTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGACAAAGCCTTCCCTTTaGGCAGAGGGTTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRTKPSL*AEGWTE
Trigger: CTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGT...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCACAAAGCCTTCCCTTTaGGCAGAGGGTTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: RPRLCPAESGSFRACGGFTKPSL*AEGWTE
Trigger: CTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGT...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGTTAGTCCGGACTCATTaGCAACAGCCTTCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRLVRTH*QQPSPA
Trigger: TGCTGGCGAAGGCTGTTGCAAATGAGTCCGGACTAA...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTTAGTCCGGACTCATTaGCAACAGCCTTCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: RPRLCPAESGSFRACGGFLVRTH*QQPSPA
Trigger: TGCTGGCGAAGGCTGTTGCAAATGAGTCCGGACTAA...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCCTCCTTCAGAATCTTaGGCAGGGGTCTTCAAGGGA +
Preference number: 5 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPPPSES*AGVFKG
Trigger: TCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAGG...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTACAAAGCCTTCCCTTTaGGCAGAGGGTTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPTKPSL*AEGWTE
Trigger: CTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGT...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGGGCTCGTTGAAAAACTaGTCGCACAGCACGTTCACT +
Preference number: 5 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEGSLKN*SHSTFT
Trigger: AGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCC...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTCACCACTCGGACACTaGCCCCTGTCTCTCGGTCTG +
Preference number: 5 (lower is better)
Translates to: NVYMRPRLCPAESGSFRASPLGH*PLSLGL
Trigger: CAGACCGAGAGACAGGGGCAAGTGTCCGAGTGGTGA...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTTCCACTCTTCTGTCTaGCCATTTCCTGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLFHSSV*PFPVSG
Trigger: CCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGAA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGGAATGGAGCCTGTTTaGGAACTTATCCGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLGMEPV*ELIRGV
Trigger: AACACCACGGATAAGTTCCAAAACAGGCTCCATTCC...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCCTCCTTCAGAATCTTaGGCAGGGGTCTTCAAGGGA +
Preference number: 5 (lower is better)
Translates to: CPAESGSFRACGGFSAGLPPSES*AGVFKG
Trigger: TCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAGG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGACAAAGCCTTCCCTTTaGGCAGAGGGTTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: CPAESGSFRACGGFSAGLTKPSL*AEGWTE
Trigger: CTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTACAAAGCCTTCCCTTTaGGCAGAGGGTTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: CVQLKVGPSERVGDSLPATKPSL*AEGWTE
Trigger: CTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGT...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTTGAACTGGTCTGGGTaGCGTACTGGTGCCAATATT +
Preference number: 5 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLLNWSG*RTGANI
Trigger: AATATTGGCACCAGTACGCAACCCAGACCAGTTCAA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCACCAATCCAAGAGCTTaGAACTGGTCTGGGTTGCGT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSATNPRA*NWSGLR
Trigger: ACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGT...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTACCAATCCAAGAGCTTaGAACTGGTCTGGGTTGCGT +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSTNPRA*NWSGLR
Trigger: ACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTTAGTCCGGACTCATTaGCAACAGCCTTCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: CVQLKVGPSERVGDSLPALVRTH*QQPSPA
Trigger: TGCTGGCGAAGGCTGTTGCAAATGAGTCCGGACTAA...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCGTTGAAAAACTaGTCGCACAGCACGTTCACT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAGSLKN*SHSTFT
Trigger: AGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCC...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGGCTCGTTGAAAAACTaGTCGCACAGCACGTTCACT +
Preference number: 5 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPGSLKN*SHSTFT
Trigger: AGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCC...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTTCCACTCTTCTGTCTaGCCATTTCCTGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAFHSSV*PFPVSG
Trigger: CCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGAA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGTTCCACTCTTCTGTCTaGCCATTTCCTGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RACVQLKVGPSERVGDSLFHSSV*PFPVSG
Trigger: CCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGAA...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGAGGCAGGAGGATCATTaGAGCCTGAGAAGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: RACVQLKVGPSERVGDSLRQEDH*SLRSQS
Trigger: GCTTTGACTTCTCAGGCTCAAATGATCCTCCTGCCT...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340871.8
ENST00000482491.5
CDS TCA 90 bp ACTCCACGAGGGGGCACGACGCCCAGGTGGTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATCTTGCAGACCTCTTTTAATGTCATA +
Preference number: 5 (lower is better)
Translates to: TPRGGTTPRWWYTSG*RMCMSILQTSFNVI
Trigger: TATGACATTAAAAGAGGTCTGCAAGATGCTCATACACATGCGTCACCCGGAGGTGTACCACCACCTGGGCGTCGTGCCCCCTCGTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CCA 90 bp GCAAGGAGGACCCCAGCTGGAGTCACCAATCCAAGAGCTTTGAACTaGTCTGGGTTGCGTACTGGTGCCAATATTGCCATGGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ARRTPAGVTNPRALN*SGLRTGANIAMVSS
Trigger: GGAGCTCACCATGGCAATATTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRPLHLV*PFLPNV
Trigger: AACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEPLHLV*PFLPNV
Trigger: AACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGG...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGACCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: MRPRLCPAESGSFRACGGPLHLV*PFLPNV
Trigger: AACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGG...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGAACTGTTCATGTGATTaGCTGACTGTGGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: WGILCRLDGLAPLSRLLENCSCD*LTVDLG
Trigger: ACCCAGATCCACAGTCAGCAAATCACATGAACAGTT...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGAACTGTTCATGTGATTaGCTGACTGTGGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRNCSCD*LTVDLG
Trigger: ACCCAGATCCACAGTCAGCAAATCACATGAACAGTT...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTTTGAACTGGTCTGGGTaGCGTACTGGTGCCAATATT +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSLNWSG*RTGANI
Trigger: AATATTGGCACCAGTACGCAACCCAGACCAGTTCAA...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTTGAACTGGTCTGGGTaGCGTACTGGTGCCAATATT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSALNWSG*RTGANI
Trigger: AATATTGGCACCAGTACGCAACCCAGACCAGTTCAA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCTTCCACTCTTCTGTCTaGCCATTTCCTGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSFHSSV*PFPVSG
Trigger: CCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGAA...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGACTCAGCCCCAGCAATaGCATGTGCAAGTAATGTCT +
Preference number: 5 (lower is better)
Translates to: YMRPRLCPAESGSFRACGTQPQQ*HVQVMS
Trigger: AGACATTACTTGCACATGCAATTGCTGGGGCTGAGT...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340871.8
ENST00000482491.5
CDS GCA 90 bp AAGGTACTGGATGACTCGCTGCTTGAGTTTATTATCCACGAACCCTaGAGGTCTGGGCTTCATCGCGTCGGTCTTCCAAGCCACAGCTCG +
Preference number: 5 (lower is better)
Translates to: KVLDDSLLEFIIHEP*RSGLHRVGLPSHSS
Trigger: CGAGCTGTGGCTTGGAAGACCGACGCGATGAAGCCCAGACCTGCAGGGTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281701.11
ENST00000461546.2
ENST00000470989.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTGGATGACTCGCTGCTaGAGTTTATTATCCACGAAC +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAWMTRC*SLLSTN
Trigger: GTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: YMRPRLCPAESGSFRACGPLHLV*PFLPNV
Trigger: AACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGG...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAPLHLV*PFLPNV
Trigger: AACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSPLHLV*PFLPNV
Trigger: AACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGAACTTATCCGTGGTGTaGAAGAGGTGGTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRNLSVV*KRWFLF
Trigger: AAAGAGAAACCACCTCTTCAACACCACGGATAAGTT...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCGGCTTTAGCTTTCTTTaGCAGGACAGCTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: RPRLCPAESGSFRACGGFGFSFL*QDSFNF
Trigger: GAAATTGAAGCTGTCCTGCAAAAGAAAGCTAAAGCC...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCAAGTTCCCCAGCAATaGCATGTGCAAGTAATGTCT +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSQVPQQ*HVQVMS
Trigger: AGACATTACTTGCACATGCAATTGCTGGGGAACTTG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCAAGTTCCCCAGCAATaGCATGTGCAAGTAATGTCT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAQVPQQ*HVQVMS
Trigger: AGACATTACTTGCACATGCAATTGCTGGGGAACTTG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
CDS-3UTR CAA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCGAAGCCACTTCTCTTTaGGGGGTAATAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: RPRLCPAESGSFRACGGFEATSL*GVIASI
Trigger: AATTGATGCTATTACCCCCAAAAGAGAAGTGGCTTC...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCATTAAGACTCTATaGACTGCACACATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: MRPRLCPAESGSFRACGGFIKTL*TAHIAA
Trigger: GGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAA...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGTTCATTAAGACTCTATaGACTGCACACATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEFIKTL*TAHIAA
Trigger: GGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAA...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTTCATTAAGACTCTATaGACTGCACACATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLFIKTL*TAHIAA
Trigger: GGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGTTGAACTGGTCTGGGTaGCGTACTGGTGCCAATATT +
Preference number: 5 (lower is better)
Translates to: CPAESGSFRACGGFSAGLLNWSG*RTGANI
Trigger: AATATTGGCACCAGTACGCAACCCAGACCAGTTCAA...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGACTCAGCCCCAGCAATaGCATGTGCAAGTAATGTCT +
Preference number: 5 (lower is better)
Translates to: PAESGSFRACGGFSAGLMTQPQQ*HVQVMS
Trigger: AGACATTACTTGCACATGCAATTGCTGGGGCTGAGT...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340871.8
ENST00000482491.5
CDS-3UTR CAA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGACGGTGGGAGGATCGCTaGGGCCTGGGACGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGRWEDR*GLGRQD
Trigger: GTCTTGACGTCCCAGGCCCAAGCGATCCTCCCACCG...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS GCA 90 bp TCTATACTGGATGACTCGCTGCTTGAGTTTATTATCCACGAACCCTaGAGGTCTGGGCTTCATCGCGTCGGTCTTCCAAGCCACAGCTCG +
Preference number: 5 (lower is better)
Translates to: SILDDSLLEFIIHEP*RSGLHRVGLPSHSS
Trigger: CGAGCTGTGGCTTGGAAGACCGACGCGATGAAGCCCAGACCTGCAGGGTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000391875.6
ENST00000461466.5
ENST00000468088.2
ENST00000470903.5
CDS-3UTR CAA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCTGGATGACTCGCTGCTaGAGTTTATTATCCACGAAC +
Preference number: 5 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSWMTRC*SLLSTN
Trigger: GTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCA...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGGAGCCAATGTCCACATATTaGCCACATTTGTTACTGGTA +
Preference number: 5 (lower is better)
Translates to: WGILCRLDGLAPLSRLLEPMSTY*PHLLLV
Trigger: TACCAGTAACAAATGTGGCAAATATGTGGACATTGG...CTCCAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCCAATGTCCACATATTaGCCACATTTGTTACTGGTA +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRPMSTY*PHLLLV
Trigger: TACCAGTAACAAATGTGGCAAATATGTGGACATTGG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTTGTCTTGCCCTTTTaGCCAAATGTTCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRLVLPF*PNVHLL
Trigger: TAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAG...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGGGTAGTCTTCCATACTaGAATCATCATCAGAATAGC +
Preference number: 5 (lower is better)
Translates to: QSVWGILCRLDGLAPLSRGSLPY*NHHQNS
Trigger: GCTATTCTGATGATGATTCAAGTATGGAAGACTACC...CCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCAACTTATCCGTGGTGTaGAAGAGGTGGTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSANLSVV*KRWFLF
Trigger: AAAGAGAAACCACCTCTTCAACACCACGGATAAGTT...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGGGCTTTAGCTTTCTTTaGCAGGACAGCTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: RACVQLKVGPSERVGDSLGFSFL*QDSFNF
Trigger: GAAATTGAAGCTGTCCTGCAAAAGAAAGCTAAAGCC...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGCTTTAGCTTTCTTTaGCAGGACAGCTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: YMRPRLCPAESGSFRACGGFSFL*QDSFNF
Trigger: GAAATTGAAGCTGTCCTGCAAAAGAAAGCTAAAGCC...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTTAGCTTTCTTTaGCAGGACAGCTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAGFSFL*QDSFNF
Trigger: GAAATTGAAGCTGTCCTGCAAAAGAAAGCTAAAGCC...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATCTTCAAACTTCACGTaGGAGATCTGGAATTCTAAC +
Preference number: 5 (lower is better)
Translates to: MRPRLCPAESGSFRACGGSSNFT*EIWNSN
Trigger: GTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAGA...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGTCTTCAAACTTCACGTaGGAGATCTGGAATTCTAAC +
Preference number: 5 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLSSNFT*EIWNSN
Trigger: GTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAGA...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGATGTGTATGAGCATCTaGCAGACCTCTTTTAATGTC +
Preference number: 5 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLMCMSI*QTSFNV
Trigger: GACATTAAAAGAGGTCTGCAAGATGCTCATACACAT...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGAATGTGTATGAGCATCTaGCAGACCTCTTTTAATGTC +
Preference number: 5 (lower is better)
Translates to: MRPRLCPAESGSFRACGGMCMSI*QTSFNV
Trigger: GACATTAAAAGAGGTCTGCAAGATGCTCATACACAT...TCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCAAGTTCCCCAGCAATaGCATGTGCAAGTAATGTCT +
Preference number: 5 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSQVPQQ*HVQVMS
Trigger: AGACATTACTTGCACATGCAATTGCTGGGGAACTTG...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
CDS-3UTR CAA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGGAAGCCACTTCTCTTTaGGGGGTAATAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: RACVQLKVGPSERVGDSLEATSL*GVIASI
Trigger: AATTGATGCTATTACCCCCAAAAGAGAAGTGGCTTC...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGAAGCCACTTCTCTTTaGGGGGTAATAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAEATSL*GVIASI
Trigger: AATTGATGCTATTACCCCCAAAAGAGAAGTGGCTTC...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCCGGCTGCTGACAGAAATCAAAAGCTaGAGGAAGCCTCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: VWGILCRLDGLAPLSRLLTEIKS*RKPQFS
Trigger: AGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTGT...CAGCAGCCGGCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGTTCATTAAGACTCTATaGACTGCACACATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPFIKTL*TAHIAA
Trigger: GGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAA...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGTCACCACTCGGACACTaGCCCCTGTCTCTCGGTCTG +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLSPLGH*PLSLGL
Trigger: CAGACCGAGAGACAGGGGCAAGTGTCCGAGTGGTGA...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGAAGGTCACCAGCAATaGCTTCCAAATTTACATCTG +
Preference number: 5 (lower is better)
Translates to: ACVQLKVGPSERVGDSLPEGHQQ*LPNLHL
Trigger: CAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTC...CGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGAAGGTCACCAGCAATaGCTTCCAAATTTACATCTG +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAEGHQQ*LPNLHL
Trigger: CAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTC...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTGAAGGTCACCAGCAATaGCTTCCAAATTTACATCTG +
Preference number: 5 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPEGHQQ*LPNLHL
Trigger: CAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTC...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGAGGCAGGAGGATCATTaGAGCCTGAGAAGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: NVYMRPRLCPAESGSFRARQEDH*SLRSQS
Trigger: GCTTTGACTTCTCAGGCTCAAATGATCCTCCTGCCT...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340871.8
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCAAAGAGAAGAATCTTTaGAATCCTGTGGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: RPRLCPAESGSFRACGGFKEKNL*NPVDLG
Trigger: ACCCAGATCCACAGGATTCAAAAGATTCTTCTCTTT...GAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469075.5
ENST00000469968.5
CDS TCA 90 bp AAAACCTGCTGGCGTGCTTCCAGACCATCCATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTTGCCCCTGTCTCTCGGTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: KTCWRASRPSISVSS*FTTRTLAPVSRSDL
Trigger: AAGATCAGACCGAGAGACAGGGGCAAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGACATATTTGCCACATTaGTTACTGGTAAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: YMRPRLCPAESGSFRACGTYLPH*LLVRYW
Trigger: CCAGTACCTTACCAGTAACAAATGTGGCAAATATGT...CCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTACATATTTGCCACATTaGTTACTGGTAAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPTYLPH*LLVRYW
Trigger: CCAGTACCTTACCAGTAACAAATGTGGCAAATATGT...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCCCAATGTCCACATATTaGCCACATTTGTTACTGGTA +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAPMSTY*PHLLLV
Trigger: TACCAGTAACAAATGTGGCAAATATGTGGACATTGG...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTCTTGTCTTGCCCTTTTaGCCAAATGTTCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSLVLPF*PNVHLL
Trigger: TAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAG...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTAACTTATCCGTGGTGTaGAAGAGGTGGTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: CVQLKVGPSERVGDSLPANLSVV*KRWFLF
Trigger: AAAGAGAAACCACCTCTTCAACACCACGGATAAGTT...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGGGAATGGAGCCTGTTTaGGAACTTATCCGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAGMEPV*ELIRGV
Trigger: AACACCACGGATAAGTTCCAAAACAGGCTCCATTCC...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp CATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTCCTCCTTCAGAATCTTaGGCAGGGGTCTTCAAGGGA +
Preference number: 5 (lower is better)
Translates to: HISRSNLPARLKAGSNESPPSES*AGVFKG
Trigger: TCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAGG...AGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGTTTACACTTGGGGTTTaGTCAATAAACCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: RACVQLKVGPSERVGDSLFTLGV*SINHPP
Trigger: AGGAGGATGGTTTATTGACAAAACCCCAAGTGTAAA...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCTTTACACTTGGGGTTTaGTCAATAAACCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSAFTLGV*SINHPP
Trigger: AGGAGGATGGTTTATTGACAAAACCCCAAGTGTAAA...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp CCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTATGTGTATGAGCATCTaGCAGACCTCTTTTAATGTC +
Preference number: 5 (lower is better)
Translates to: PRLCPAESGSFRACGGFSMCMSI*QTSFNV
Trigger: GACATTAAAAGAGGTCTGCAAGATGCTCATACACAT...AGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTACAGAAATCAAAAGCTaGAGGAAGCCTCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPTEIKS*RKPQFS
Trigger: AGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTGT...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTGGCCCGGGCGCAGGATaGCAGGGTCAATTATATCTG +
Preference number: 5 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLGPGAG*QGQLYL
Trigger: CAGATATAATTGACCCTGCAATCCTGCGCCCGGGCC...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGGCCCGGGCGCAGGATaGCAGGGTCAATTATATCTG +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLGPGAG*QGQLYL
Trigger: CAGATATAATTGACCCTGCAATCCTGCGCCCGGGCC...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS GCA 90 bp TGCCATGGTGAGCTCCTCTCTAATGTCTTCCAGGGCACCAATATCTaGCCATGTCACATTAGGGACAGTGACAAAGCCTTCCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: CHGELLSNVFQGTNI*PCHIRDSDKAFPFG
Trigger: GCCAAAAGGGAAGGCTTTGTCACTGTCCCTAATGTGACATGGGCAGATATTGGTGCCCTGGAAGACATTAGAGAGGAGCTCACCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGCTTGTCTTGCCCTTTTaGCCAAATGTTCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: PAESGSFRACGGFSAGLMLVLPF*PNVHLL
Trigger: TAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAG...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGCTTGTCTTGCCCTTTTaGCCAAATGTTCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: CPAESGSFRACGGFSAGLLVLPF*PNVHLL
Trigger: TAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAG...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTCTTGTCTTGCCCTTTTaGCCAAATGTTCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: CVQLKVGPSERVGDSLPALVLPF*PNVHLL
Trigger: TAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAG...AGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTCTAAGCACAGAAATCAAAAGCTaGAGGAAGCCTCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LQSVWGILCRLDGLAPLSTEIKS*RKPQFS
Trigger: AGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTGT...GCTTAGAGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCAGTAATTCGGGGCCCTaGACAGATATAAAATTTAGT +
Preference number: 5 (lower is better)
Translates to: RLCPAESGSFRACGGFSASNSGP*TDIKFS
Trigger: ACTAAATTTTATATCTGTCAAGGGCCCCGAATTACT...GGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGGGCTAGCTCCTAGTAATTCGGGGCCCTaGACAGATATAAAATTTAGT +
Preference number: 5 (lower is better)
Translates to: WVLQSVWGILCRLDGLAPSNSGP*TDIKFS
Trigger: ACTAAATTTTATATCTGTCAAGGGCCCCGAATTACT...AGGAGCTAGCCCATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGAGTAATTCGGGGCCCTaGACAGATATAAAATTTAGT +
Preference number: 5 (lower is better)
Translates to: RACVQLKVGPSERVGDSLSNSGP*TDIKFS
Trigger: ACTAAATTTTATATCTGTCAAGGGCCCCGAATTACT...CAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TGTCCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGAAAGAGAAGAATCTTTaGAATCCTGTGGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: CPAESGSFRACGGFSAGLKEKNL*NPVDLG
Trigger: ACCCAGATCCACAGGATTCAAAAGATTCTTCTCTTT...CAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469075.5
ENST00000469968.5
CDS CCA 90 bp TCTCAGCTTCTGCTCAGACTCTCCGGATACTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAATTGGCAGGTCAAGTTCCCCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SQLLLRLSGYSRHNL*SSHFQNWQVKFPSN
Trigger: ATTGCTGGGGAACTTGACCTGCCAATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAGTCTGAGCAGAAGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000467882.5
ENST00000469075.5
ENST00000469968.5
CDS-3UTR CAA 90 bp CTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGATTAGTAGCTCCATGGATGACTCGCTGCTaGAGTTTATTATCCACGAAC +
Preference number: 5 (lower is better)
Translates to: LPARLKAGSNESGRLVAPWMTRC*SLLSTN
Trigger: GTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCA...TGGAGCTACTAATCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp AGGATCGCTTGGGCCTGGGACGTCAAGACTGCGGTAAGCCATGATTGTGCCAGTACATATTTGCCACATTaGTTACTGGTAAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: RIAWAWDVKTAVSHDCASTYLPH*LLVRYW
Trigger: CCAGTACCTTACCAGTAACAAATGTGGCAAATATGT...ACTGGCACAATCATGGCTTACCGCAGTCTTGACGTCCCAGGCCCAAGCGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR CAA 90 bp CCTAGGCATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: PRHISRSNLPARLKAGSNPLHLV*PFLPNV
Trigger: AACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGG...GTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATGCCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp TCTCTCAGCTTCTGCTCAGACTCTCCGGATACTCCAGACACAATCTCTGGAGCAGGAATGGAGCCTGTTTaGGAACTTATCCGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SLSFCSDSPDTPDTISGAGMEPV*ELIRGV
Trigger: AACACCACGGATAAGTTCCAAAACAGGCTCCATTCC...TGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp CTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGTCTGGTCGATTTTACACTTGGGGTTTaGTCAATAAACCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: LGRTFPHVSKQGLTSLVDFTLGV*SINHPP
Trigger: AGGAGGATGGTTTATTGACAAAACCCCAAGTGTAAA...ATCGACCAGACTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTAGTCCGGACTCATTaGCAACAGCCTTCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSLVRTH*QQPSPA
Trigger: TGCTGGCGAAGGCTGTTGCAAATGAGTCCGGACTAA...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CCAGCTGAAAGTGGGTCCTTCAGAGCGTGTGGGGGATTCTCTGCCGGCTTGATGAGTAATTCGGGGCCCTaGACAGATATAAAATTTAGT +
Preference number: 5 (lower is better)
Translates to: PAESGSFRACGGFSAGLMSNSGP*TDIKFS
Trigger: ACTAAATTTTATATCTGTCAAGGGCCCCGAATTACT...CATCAAGCCGGCAGAGAATCCCCCACACGCTCTGAAGGACCCACTTTCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGGCTCGTTGAAAAACTaGTCGCACAGCACGTTCACT +
Preference number: 5 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQGSLKN*SHSTFT
Trigger: AGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCC...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS TCA 90 bp AAAACCTGCTGGCGTGCTTCCAGACCATCCATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTTGCCCCTGTCTCATTTCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: KTCWRASRPSISVSS*FTTRTLAPVSFLSF
Trigger: GAAAGAAAGAAATGAGACAGGGGCAAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496393.2
CDS GCA 90 bp AGAGCAACAATGAAATCATTCAGTTCAATGCACAGTCCTTGCATCTaGTCCTCTGAGAGGGGATCTTGGTCTCTTAGCAACCCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RATMKSFSSMHSPCI*SSERGSWSLSNPSS
Trigger: GCTGCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGAACTGAATGATTTCATTGTTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CCA 90 bp AGTTCAATGCACAGTCCTTGCATCTGCTCCTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAGCAGCCTTTGTAATTCATCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: SSMHSPCICSSERGS*SLSNPSSLCNSSCV
Trigger: AACACAGGATGAATTACAAAGGCTGCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CTGGGTGACAGAGCGAGACGCTGTTCATTATCCTCTTCACCTTGTCTTGCCCTTCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: LGDRARRCSLSSSPCLALPLHLV*PFLPNV
Trigger: AACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGG...AAGGGCAAGACAAGGTGAAGAGGATAATGAACAGCGTCTCGCTCTGTCACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR CAA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGATGTGTATGAGCATCTaGCAGACCTCTTTTAATGTC +
Preference number: 5 (lower is better)
Translates to: NVYMRPRLCPAESGSFRAMCMSI*QTSFNV
Trigger: GACATTAAAAGAGGTCTGCAAGATGCTCATACACAT...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATGCTTCATCTGGGATACCTAGGCATATTTCTCGGTCGAACCTTCCCGCACGTCCAAGTTCCCCAGCAATaGCATGTGCAAGTAATGTCT +
Preference number: 5 (lower is better)
Translates to: MLHLGYLGIFLGRTFPHVQVPQQ*HVQVMS
Trigger: AGACATTACTTGCACATGCAATTGCTGGGGAACTTG...GACGTGCGGGAAGGTTCGACCGAGAAATATGCCTAGGTATCCCAGATGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp AATGTTTACATGAGGCCGCGCCTGTGTCCAGCTGAAAGTGGGTCCTTCAGAGCGACAGAAATCAAAAGCTaGAGGAAGCCTCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: NVYMRPRLCPAESGSFRATEIKS*RKPQFS
Trigger: AGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTGT...CGCTCTGAAGGACCCACTTTCAGCTGGACACAGGCGCGGCCTCATGTAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTACAAAGCCTTCCCTTTaGGCAGAGGGTTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLTKPSL*AEGWTE
Trigger: CTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGT...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTACCAATCCAAGAGCTTaGAACTGGTCTGGGTTGCGT +
Preference number: 5 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLTNPRA*NWSGLR
Trigger: ACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGACCAATCCAAGAGCTTaGAACTGGTCTGGGTTGCGT +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLTNPRA*NWSGLR
Trigger: ACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGT...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTGGCTCGTTGAAAAACTaGTCGCACAGCACGTTCACT +
Preference number: 5 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLGSLKN*SHSTFT
Trigger: AGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCC...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGGCTCGTTGAAAAACTaGTCGCACAGCACGTTCACT +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLGSLKN*SHSTFT
Trigger: AGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCC...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCATTCCACTCTTCTGTCTaGCCATTTCCTGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RHFHTRLARWEESSASASFHSSV*PFPVSG
Trigger: CCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGAA...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTTTCCACTCTTCTGTCTaGCCATTTCCTGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLFHSSV*PFPVSG
Trigger: CCCTGAGACAGGAAATGGCAAGACAGAAGAGTGGAA...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000481213.5
ENST00000482491.5
CDS TCA 90 bp AGCCTTCCCTTTTGGCAGAGGGTTGGACTGAGGATAGAGCAACAATaGAATCATTCAGTTCAATGCACAGTCCTTGCATCTGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SLPFWQRVGLRIEQQ*NHSVQCTVLASAPL
Trigger: CAGAGGAGCAGATGCAAGGACTGTGCATTGAACTGAATGATTTCATTGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS GCA 90 bp GAGATCTGCGCCCGTATAGCAATCACAGCGAAGGTCACCAGCAATTaGTTCCAAATTTACATCTGCATCCAGTGGTGGTTTGGTACCATT +
Preference number: 5 (lower is better)
Translates to: EICARIAITAKVTSN*FQIYICIQWWFGTI
Trigger: AATGGTACCAAACCACCACTGGATGCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTCGCTGTGATTGCTATACGGGCGCAGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000483094.5
ENST00000493060.5
ENST00000496393.2
CDS-3UTR CAA 90 bp AGGCATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTAACGAGCTTGTCTTGCCCTTTTaGCCAAATGTTCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: RHISRSNLPARLKAGSNELVLPF*PNVHLL
Trigger: TAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAG...CTCGTTAGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp ATACCTAGGCATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: IPRHISRSNLPARLKAGSIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...AGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATGCCTAGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp GGTCGATTAGTAGCTCCAATAACTAGGACCCGGGCTGTAGCAGCCACATTATTCAACTGTTCATGTGATTaGCTGACTGTGGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: GRLVAPITRTRAVAATLFNCSCD*LTVDLG
Trigger: ACCCAGATCCACAGTCAGCAAATCACATGAACAGTT...GAATAATGTGGCTGCTACAGCCCGGGTCCTAGTTATTGGAGCTACTAATCGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCCCTCCTTCAGAATCTTaGGCAGGGGTCTTCAAGGGA +
Preference number: 5 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFPPSES*AGVFKG
Trigger: TCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAGG...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCTTAGTCCGGACTCATTaGCAACAGCCTTCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFLVRTH*QQPSPA
Trigger: TGCTGGCGAAGGCTGTTGCAAATGAGTCCGGACTAA...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CCA 90 bp AGCACCTGTGTTTCAGAAGTGGGCTCAGTTCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAATCTTCCATTTCAGGATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: STCVSEVGSVPSLSS*TPLDGKSSISGFFF
Trigger: GAAGAAAAATCCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462893.1
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGTGGATGACTCGCTGCTaGAGTTTATTATCCACGAAC +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLWMTRC*SLLSTN
Trigger: GTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCA...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATACCTAGGCATATTTCTCGGTCGAACCTTCCCGCACGTCTCAAAGCAGGGTCTACATATTTGCCACATTaGTTACTGGTAAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: IPRHISRSNLPARLKAGSTYLPH*LLVRYW
Trigger: CCAGTACCTTACCAGTAACAAATGTGGCAAATATGT...AGACCCTGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATGCCTAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp CTGGGTGACAGAGCGAGACGCTGTTCATTATCCTCTTCACCTTGTCTTGCCCTTCTTGTCTTGCCCTTTTaGCCAAATGTTCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: LGDRARRCSLSSSPCLALLVLPF*PNVHLL
Trigger: TAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAG...AAGGGCAAGACAAGGTGAAGAGGATAATGAACAGCGTCTCGCTCTGTCACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR CAA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GTAGCTCCAATAACTAGGACCCGGGCTGTAGCAGCCACATTATTCAGATCATCCAACTTATCCGTGGTGTaGAAGAGGTGGTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: VAPITRTRAVAATLFRSSNLSVV*KRWFLF
Trigger: AAAGAGAAACCACCTCTTCAACACCACGGATAAGTT...GGATGATCTGAATAATGTGGCTGCTACAGCCCGGGTCCTAGTTATTGGAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp GGTCGATTAGTAGCTCCAATAACTAGGACCCGGGCTGTAGCAGCCACATTATTCGAAGCCACTTCTCTTTaGGGGGTAATAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: GRLVAPITRTRAVAATLFEATSL*GVIASI
Trigger: AATTGATGCTATTACCCCCAAAAGAGAAGTGGCTTC...GAATAATGTGGCTGCTACAGCCCGGGTCCTAGTTATTGGAGCTACTAATCGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS CCA 90 bp TCATCCTGTGTTTCAGAAGTGGGCTCAGTTCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAATCTTCCATTTCAGGATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSCVSEVGSVPSLSS*TPLDGKSSISGFFF
Trigger: GAAGAAAAATCCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: RHFHTRLARWEESSASASIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTAACTGTTCATGTGATTaGCTGACTGTGGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLNCSCD*LTVDLG
Trigger: ACCCAGATCCACAGTCAGCAAATCACATGAACAGTT...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCGGAATGGAGCCTGTTTaGGAACTTATCCGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFGMEPV*ELIRGV
Trigger: AACACCACGGATAAGTTCCAAAACAGGCTCCATTCC...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp GGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGTCTTCAAACTTCACGTaGGAGATCTGGAATTCTAAC +
Preference number: 5 (lower is better)
Translates to: GIFTQGWPDGKNLQLQLQSSNFT*EIWNSN
Trigger: GTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAGA...CTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCGAAGCCACTTCTCTTTaGGGGGTAATAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSEATSL*GVIASI
Trigger: AATTGATGCTATTACCCCCAAAAGAGAAGTGGCTTC...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGAAGCCACTTCTCTTTaGGGGGTAATAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLEATSL*GVIASI
Trigger: AATTGATGCTATTACCCCCAAAAGAGAAGTGGCTTC...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCATTCATTAAGACTCTATaGACTGCACACATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: RHFHTRLARWEESSASASFIKTL*TAHIAA
Trigger: GGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAA...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGAAGGTCACCAGCAATaGCTTCCAAATTTACATCTG +
Preference number: 5 (lower is better)
Translates to: RHFHTRLARWEESSASASEGHQQ*LPNLHL
Trigger: CAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTC...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCGAAGGTCACCAGCAATaGCTTCCAAATTTACATCTG +
Preference number: 5 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSEGHQQ*LPNLHL
Trigger: CAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTC...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS TCA 90 bp ACTTCATCAAAGAATATCACACAGGGTGCTGAGTTCTTGGCTCGTTaGAAAACTTGTCGCACAGCACGTTCACTCTCACCAACATACATG +
Preference number: 5 (lower is better)
Translates to: TSSKNITQGAEFLAR*KTCRTARSLSPTYM
Trigger: CATGTATGTTGGTGAGAGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTCAGCACCCTGTGTGATATTCTTTGATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS GCA 90 bp ACCTTGAGTTCACGTATAGCAATCACAGCGAAGGTCACCAGCAATTaGTTCCAAATTTACATCTGCATCCAGTGGTGGTTTGGTACCATT +
Preference number: 5 (lower is better)
Translates to: TLSSRIAITAKVTSN*FQIYICIQWWFGTI
Trigger: AATGGTACCAAACCACCACTGGATGCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTCGCTGTGATTGCTATACGTGAACTCAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489194.5
CDS CCA 90 bp AGGGAATGGAGCCTGTTTTGGAACTTATCCGTGGTGTTGAAGAGGTaGTTTCTCTTTGCTCCATCTCAGGAGTATTTGAAACAGAATCAG +
Preference number: 5 (lower is better)
Translates to: REWSLFWNLSVVLKR*FLFAPSQEYLKQNQ
Trigger: CTGATTCTGTTTCAAATACTCCTGAGATGGAGCAAAGAGAAACCACCTCTTCAACACCACGGATAAGTTCCAAAACAGGCTCCATTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000436927.5
ENST00000461466.5
ENST00000467882.5
ENST00000470903.5
ENST00000482491.5
ENST00000492281.5
ENST00000498767.1
CDS-3UTR CAA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCTGGATGACTCGCTGCTaGAGTTTATTATCCACGAAC +
Preference number: 5 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFWMTRC*SLLSTN
Trigger: GTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCA...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGACATATTTGCCACATTaGTTACTGGTAAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLTYLPH*LLVRYW
Trigger: CCAGTACCTTACCAGTAACAAATGTGGCAAATATGT...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000469075.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGAATTATCCTCTTCACCTaGTCTTGCCCTTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGIILFT*SCPFCQ
Trigger: TTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAAT...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR CAA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGGTAGTCTTCCATACTaGAATCATCATCAGAATAGC +
Preference number: 5 (lower is better)
Translates to: RHFHTRLARWEESSASASGSLPY*NHHQNS
Trigger: GCTATTCTGATGATGATTCAAGTATGGAAGACTACC...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGGTAGTCTTCCATACTaGAATCATCATCAGAATAGC +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLGSLPY*NHHQNS
Trigger: GCTATTCTGATGATGATTCAAGTATGGAAGACTACC...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCATTTACACTTGGGGTTTaGTCAATAAACCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: RHFHTRLARWEESSASASFTLGV*SINHPP
Trigger: AGGAGGATGGTTTATTGACAAAACCCCAAGTGTAAA...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000482491.5
CDS-3UTR CAA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGCTTTAGCTTTCTTTaGCAGGACAGCTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLGFSFL*QDSFNF
Trigger: GAAATTGAAGCTGTCCTGCAAAAGAAAGCTAAAGCC...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCATCTTCAAACTTCACGTaGGAGATCTGGAATTCTAAC +
Preference number: 5 (lower is better)
Translates to: RHFHTRLARWEESSASASSSNFT*EIWNSN
Trigger: GTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAGA...TGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp AAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCACAGAAATCAAAAGCTaGAGGAAGCCTCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: KRKKAFSHKAGQMGRIFSTEIKS*RKPQFS
Trigger: AGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTGT...GCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGACCAATGTCCACATATTaGCCACATTTGTTACTGGTA +
Preference number: 5 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGPMSTY*PHLLLV
Trigger: TACCAGTAACAAATGTGGCAAATATGTGGACATTGG...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR CAA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGGTAGTCTTCCATACTaGAATCATCATCAGAATAGC +
Preference number: 5 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLGSLPY*NHHQNS
Trigger: GCTATTCTGATGATGATTCAAGTATGGAAGACTACC...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp CATGGTGCATTTGACACAGCTTGCTCAAATAGTTCTCTCAGCTTCTGCTCAGACGGTAGTCTTCCATACTaGAATCATCATCAGAATAGC +
Preference number: 5 (lower is better)
Translates to: HGAFDTACSNSSLSFCSDGSLPY*NHHQNS
Trigger: GCTATTCTGATGATGATTCAAGTATGGAAGACTACC...GTCTGAGCAGAAGCTGAGAGAACTATTTGAGCAAGCTGTGTCAAATGCACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS-3UTR CAA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGAGGTAGTCTTCCATACTaGAATCATCATCAGAATAGC +
Preference number: 5 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGGSLPY*NHHQNS
Trigger: GCTATTCTGATGATGATTCAAGTATGGAAGACTACC...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS-3UTR CAA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTTCTTCAAACTTCACGTaGGAGATCTGGAATTCTAAC +
Preference number: 5 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLSSNFT*EIWNSN
Trigger: GTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAGA...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp ATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTATGTGTATGAGCATCTaGCAGACCTCTTTTAATGTC +
Preference number: 5 (lower is better)
Translates to: IFTQGWPDGKNLQLQLQLMCMSI*QTSFNV
Trigger: GACATTAAAAGAGGTCTGCAAGATGCTCATACACAT...AAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCGAAGCCACTTCTCTTTaGGGGGTAATAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFEATSL*GVIASI
Trigger: AATTGATGCTATTACCCCCAAAAGAGAAGTGGCTTC...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCTTCATTAAGACTCTATaGACTGCACACATTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFFIKTL*TAHIAA
Trigger: GGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAA...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTAGTAATTCGGGGCCCTaGACAGATATAAAATTTAGT +
Preference number: 5 (lower is better)
Translates to: EGIFTQGWPDGKNLQLQLSNSGP*TDIKFS
Trigger: ACTAAATTTTATATCTGTCAAGGGCCCCGAATTACT...AAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCAGCTTCAGCTTCAGCTTGAGTAATTCGGGGCCCTaGACAGATATAAAATTTAGT +
Preference number: 5 (lower is better)
Translates to: FSHKAGQMGRIFSFSFSLSNSGP*TDIKFS
Trigger: ACTAAATTTTATATCTGTCAAGGGCCCCGAATTACT...CAAGCTGAAGCTGAAGCTGAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp TTGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCGGTGGGAGGAAAAGAGAAGAATCTTTaGAATCCTGTGGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: LNHHQNSFQYTCEAAVGGKEKNL*NPVDLG
Trigger: ACCCAGATCCACAGGATTCAAAAGATTCTTCTCTTT...TCCTCCCACCGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470989.5
CDS GCA 90 bp GCAATCACAGCGAAGGTCACCAGCAATTGCTTCCAAATTTACATCTaGATCCAGTGGTGGTTTGGTACCATTCTAAGTAAGAGAGAAAAA +
Preference number: 5 (lower is better)
Translates to: AITAKVTSNCFQIYI*IQWWFGTILSKREK
Trigger: TTTTTCTCTCTTACTTAGAATGGTACCAAACCACCACTGGATGCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTCGCTGTGATTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493060.5
CDS-3UTR CAA 90 bp TTAAAGAGGAAGAAGGCATTTTCACACAAGGCTGGCCAGATGGGAAGAATCTTCTCTTCAAACTTCACGTaGGAGATCTGGAATTCTAAC +
Preference number: 5 (lower is better)
Translates to: LKRKKAFSHKAGQMGRIFSSNFT*EIWNSN
Trigger: GTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAGA...GAAGATTCTTCCCATCTGGCCAGCCTTGTGTGAAAATGCCTTCTTCCTCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS-3UTR CAA 90 bp GATCATCCATGCAGGTTAGGAGTTGGGCTACAATTCTTCGTTCCATATCTTTTGCCAATGTCCACATATTaGCCACATTTGTTACTGGTA +
Preference number: 5 (lower is better)
Translates to: DHPCRLGVGLQFFVPYLLPMSTY*PHLLLV
Trigger: TACCAGTAACAAATGTGGCAAATATGTGGACATTGG...CAAAAGATATGGAACGAAGAATTGTAGCCCAACTCCTAACCTGCATGGATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS CAA 72 bp CGATCTGCAGGGGGCGGTAAACCCACAAACAGTGTTTaGTCCAGGCGGCCCGGGCGCAGGATTGCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: RSAGGGKPTNSV*SRRPGRRIAGS
Trigger: TGACCCTGCAATCCTGCGCCCGGGCCGCCTGGACAAAACACTGTTTGTGGGTTTACCGCCCCCTGCAGATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000489194.5
ENST00000496393.2
CDS TCA 72 bp GGGGGCACGACGCCCAGGTGGTGGTACACCTCCGGGTaGCGCATGTGTATGAGCATCTTGCAGACCTCCTTT +
Preference number: 6 (lower is better)
Translates to: GGTTPRWWYTSG*RMCMSILQTSF
Trigger: AAAGGAGGTCTGCAAGATGCTCATACACATGCGTCACCCGGAGGTGTACCACCACCTGGGCGTCGTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS CAA 90 bp ATGGCAAGGCGATCTGCAGGGGGCGGTAAACCCACAAACAGTGTTTaGTCCAGGCGGCCCGGGCGCAGGATTGCAGGGTCAATTATATCT +
Preference number: 6 (lower is better)
Translates to: MARRSAGGGKPTNSV*SRRPGRRIAGSIIS
Trigger: AGATATAATTGACCCTGCAATCCTGCGCCCGGGCCGCCTGGACAAAACACTGTTTGTGGGTTTACCGCCCCCTGCAGATCGCCTTGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000489194.5
ENST00000496393.2
CDS CAA 90 bp GGACCAGCAAGGAGGACCCCAGCTGGAGTCACCAATCCAAGAGCTTaGAACTGGTCTGGGTTGCGTACTGGTGCCAATATTGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: GPARRTPAGVTNPRA*NWSGLRTGANIAMV
Trigger: CACCATGGCAATATTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTTGCTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS TCA 72 bp TGGCGTGCTTCCAGACCATCCATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTTGCCCCTGTCTCTCGG +
Preference number: 6 (lower is better)
Translates to: WRASRPSISVSS*FTTRTLAPVSR
Trigger: CCGAGAGACAGGGGCAAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGATGGATGGTCTGGAAGCACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS GCA 72 bp AAACAGTGTTTTGTCCAGGCGGCCCGGGCGCAGGATTaGAGGGTCAATTATATCTGGCCTGTTAGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: KQCFVQAARAQD*RVNYIWPVSGC
Trigger: GCAGCCACTAACAGGCCAGATATAATTGACCCTGCAATCCTGCGCCCGGGCCGCCTGGACAAAACACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000489194.5
ENST00000496393.2
CDS TCA 72 bp GGAGGACCCCAGCTGGAGTCACCAATCCAAGAGCTTTaGACTGGTCTGGGTTGCGTACTGGTGCCAATATTG +
Preference number: 6 (lower is better)
Translates to: GGPQLESPIQEL*TGLGCVLVPIL
Trigger: CAATATTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS TCA 72 bp CCAGGTGGTGGTACACCTCCGGGTGACGCATGTGTATaGGCATCTTGCAGACCTCCTTTCTTTTGCAGGACA +
Preference number: 6 (lower is better)
Translates to: PGGGTPPGDACV*ASCRPPFFCRT
Trigger: TGTCCTGCAAAAGAAAGGAGGTCTGCAAGATGCTCATACACATGCGTCACCCGGAGGTGTACCACCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467882.5
CDS GCA 72 bp GATGACTCGCTGCTTGAGTTTATTATCCACGAACCCTaGAGGTCTGGGCTTCATCGCGTCGGTCTTCCAAGC +
Preference number: 6 (lower is better)
Translates to: DDSLLEFIIHEP*RSGLHRVGLPS
Trigger: GCTTGGAAGACCGACGCGATGAAGCCCAGACCTGCAGGGTTCGTGGATAATAAACTCAAGCAGCGAGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000461466.5
ENST00000461546.2
ENST00000468088.2
ENST00000468673.5
ENST00000470903.5
ENST00000470989.5
ENST00000482491.5
CDS CCA 72 bp ACCCCAGCTGGAGTCACCAATCCAAGAGCTTTGAACTaGTCTGGGTTGCGTACTGGTGCCAATATTGCCATG +
Preference number: 6 (lower is better)
Translates to: TPAGVTNPRALN*SGLRTGANIAM
Trigger: CATGGCAATATTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGTGACTCCAGCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 72 bp GGAGTCACCAATCCAAGAGCTTTGAACTGGTCTGGGTaGCGTACTGGTGCCAATATTGCCATGGTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: GVTNPRALNWSG*RTGANIAMVSS
Trigger: GGAGCTCACCATGGCAATATTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 72 bp AGGAGGACCCCAGCTGGAGTCACCAATCCAAGAGCTTaGAACTGGTCTGGGTTGCGTACTGGTGCCAATATT +
Preference number: 6 (lower is better)
Translates to: RRTPAGVTNPRA*NWSGLRTGANI
Trigger: AATATTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS TCA 72 bp CATTTGAGCCTGAGAAGTCAAAGCTGCAGTGAGCTGTaGTCATGCCACTGCACTCAGCCCCAGCAATTGCAT +
Preference number: 6 (lower is better)
Translates to: HLSLRSQSCSEL*SCHCTQPQQLH
Trigger: ATGCAATTGCTGGGGCTGAGTGCAGTGGCATGATCACAGCTCACTGCAGCTTTGACTTCTCAGGCTCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340871.8
ENST00000482491.5
CDS TCA 72 bp TGGCGTGCTTCCAGACCATCCATCTCTGTAAGTAGCTaGTTCACCACTCGGACACTTGCCCCTGTCTCATTT +
Preference number: 6 (lower is better)
Translates to: WRASRPSISVSS*FTTRTLAPVSF
Trigger: AAATGAGACAGGGGCAAGTGTCCGAGTGGTGAATCAGCTACTTACAGAGATGGATGGTCTGGAAGCACGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496393.2
CDS CCA 72 bp CACAGTCCTTGCATCTGCTCCTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAGCAGCCTTTGTAATTCA +
Preference number: 6 (lower is better)
Translates to: HSPCICSSERGS*SLSNPSSLCNS
Trigger: TGAATTACAAAGGCTGCTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CCA 72 bp AGCTGGAGTCACCAATCCAAGAGCTTTGAACTGGTCTaGGTTGCGTACTGGTGCCAATATTGCCATGGTGAG +
Preference number: 6 (lower is better)
Translates to: SWSHQSKSFELV*VAYWCQYCHGE
Trigger: CTCACCATGGCAATATTGGCACCAGTACGCAACCCAGACCAGTTCAAAGCTCTTGGATTGGTGACTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CCA 72 bp CTTTGGCAGGGGTCTTCAAGGGAATGGAGCCTGTTTTaGAACTTATCCGTGGTGTTGAAGAGGTGGTTTCTC +
Preference number: 6 (lower is better)
Translates to: LWQGSSREWSLF*NLSVVLKRWFL
Trigger: GAGAAACCACCTCTTCAACACCACGGATAAGTTCCAAAACAGGCTCCATTCCCTTGAAGACCCCTGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000436927.5
ENST00000461466.5
ENST00000467882.5
ENST00000470903.5
ENST00000482491.5
ENST00000492281.5
ENST00000498767.1
CDS CCA 72 bp CTGCTCAGACTCTCCGGATACTCCAGACACAATCTCTaGAGCAGCCACTTTCAAAATTGGCAGGTCAAGTTC +
Preference number: 6 (lower is better)
Translates to: LLRLSGYSRHNL*SSHFQNWQVKF
Trigger: GAACTTGACCTGCCAATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAGTCTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000467882.5
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CCA 72 bp TCTGGCCTGTTAGTGGCTGCCATAATAAAAACCTGCTaGCGTGCTTCCAGACCATCCATCTCTGTAAGTAGC +
Preference number: 6 (lower is better)
Translates to: SGLLVAAIIKTC*RASRPSISVSS
Trigger: GCTACTTACAGAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTTATTATGGCAGCCACTAACAGGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000489194.5
ENST00000496393.2
CDS TCA 72 bp CCAGGTGGTGGTACACCTCCGGGTGACGCATGTGTATaGGCATCTTGCAGACCTCTTTTAATGTCATATCAT +
Preference number: 6 (lower is better)
Translates to: PGGGTPPGDACV*ASCRPLLMSYH
Trigger: ATGATATGACATTAAAAGAGGTCTGCAAGATGCTCATACACATGCGTCACCCGGAGGTGTACCACCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS TCA 72 bp TCTTCTGCTGTTCCTGTAGCTTCATTAAGACTCTATTaGCTGCACACATTGCTGCCTCTCGGCACAGTGCCA +
Preference number: 6 (lower is better)
Translates to: SSAVPVASLRLY*LHTLLPLGTVP
Trigger: TGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAAGCTACAGGAACAGCAGAAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000462893.1
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CCA 72 bp CTCCTTCAGAATCTTTGGCAGGGGTCTTCAAGGGAATaGAGCCTGTTTTGGAACTTATCCGTGGTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: LLQNLWQGSSRE*SLFWNLSVVLK
Trigger: CTTCAACACCACGGATAAGTTCCAAAACAGGCTCCATTCCCTTGAAGACCCCTGCCAAAGATTCTGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000436927.5
ENST00000461466.5
ENST00000467882.5
ENST00000470903.5
ENST00000482491.5
ENST00000492281.5
ENST00000498767.1
CDS CCA 72 bp TCCAGACACAATCTCTGGAGCAGCCACTTTCAAAATTaGCAGGTCAAGTTCCCCAGCAATTGCATGTGCAAG +
Preference number: 6 (lower is better)
Translates to: SRHNLWSSHFQN*QVKFPSNCMCK
Trigger: CTTGCACATGCAATTGCTGGGGAACTTGACCTGCCAATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000467882.5
ENST00000469075.5
ENST00000469968.5
CDS CCA 72 bp GTTTCAGAAGTGGGCTCAGTTCCCAGCCTTTCCTCCTaGACTCCTTTAGATGGCAAATCTTCCATTTCAGGA +
Preference number: 6 (lower is better)
Translates to: VSEVGSVPSLSS*TPLDGKSSISG
Trigger: TCCTGAAATGGAAGATTTGCCATCTAAAGGAGTCCAGGAGGAAAGGCTGGGAACTGAGCCCACTTCTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000462893.1
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 72 bp CATTTGTTACTGGTAAGGTACTGGATGACTCGCTGCTaGAGTTTATTATCCACGAACCCTGCAGGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: HLLLVRYWMTRC*SLLSTNPAGLG
Trigger: GCCCAGACCTGCAGGGTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTACCTTACCAGTAACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281701.11
ENST00000461546.2
ENST00000467882.5
ENST00000468673.5
ENST00000469075.5
ENST00000470989.5
ENST00000482491.5
ENST00000488718.5
CDS CAA 72 bp TCTTTGGCAGGGGTCTTCAAGGGAATGGAGCCTGTTTaGGAACTTATCCGTGGTGTTGAAGAGGTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: SLAGVFKGMEPV*ELIRGVEEVVS
Trigger: AGAAACCACCTCTTCAACACCACGGATAAGTTCCAAAACAGGCTCCATTCCCTTGAAGACCCCTGCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000436927.5
ENST00000461466.5
ENST00000467882.5
ENST00000470903.5
ENST00000482491.5
ENST00000492281.5
ENST00000498767.1
CDS CAA 72 bp TTCTTCTGCTGTTCCTGTAGCTTCATTAAGACTCTATaGACTGCACACATTGCTGCCTCTCGGCACAGTGCC +
Preference number: 6 (lower is better)
Translates to: FFCCSCSFIKTL*TAHIAASRHSA
Trigger: GGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAAGCTACAGGAACAGCAGAAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000462893.1
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 72 bp CATGTCACATTAGGGACAGTGACAAAGCCTTCCCTTTaGGCAGAGGGTTGGACTGAGGATAGAGCAACAATG +
Preference number: 6 (lower is better)
Translates to: HVTLGTVTKPSL*AEGWTEDRATM
Trigger: CATTGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGTCACTGTCCCTAATGTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 72 bp TTCTTCGACCATAGTCTATACTGGATGACTCGCTGCTaGAGTTTATTATCCACGAACCCTGCAGGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: FFDHSLYWMTRC*SLLSTNPAGLG
Trigger: GCCCAGACCTGCAGGGTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTATAGACTATGGTCGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340871.8
ENST00000391875.6
ENST00000436927.5
ENST00000461466.5
ENST00000468088.2
ENST00000470903.5
ENST00000487758.5
CDS CAA 90 bp AGAGATCTGCGCCCGTATAGCAATCACAGCGAAGGTCACCAGCAATaGCTTCCAAATTTACATCTGCATCCAGTGGTGGTTTGGTACCAT +
Preference number: 6 (lower is better)
Translates to: RDLRPYSNHSEGHQQ*LPNLHLHPVVVWYH
Trigger: ATGGTACCAAACCACCACTGGATGCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTCGCTGTGATTGCTATACGGGCGCAGATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000483094.5
ENST00000493060.5
ENST00000496393.2
CDS TCA 72 bp AAGAATATCACACAGGGTGCTGAGTTCTTGGCTCGTTaGAAAACTTGTCGCACAGCACGTTCACTCTCACCA +
Preference number: 6 (lower is better)
Translates to: KNITQGAEFLAR*KTCRTARSLSP
Trigger: TGGTGAGAGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTCAGCACCCTGTGTGATATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS GCA 72 bp ATATCTGGCCTGTTAGTGGCTGCCATAATAAAAACCTaGTGGCGTGCTTCCAGACCATCCATCTCTGTAAGT +
Preference number: 6 (lower is better)
Translates to: ISGLLVAAIIKT*WRASRPSISVS
Trigger: ACTTACAGAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTTATTATGGCAGCCACTAACAGGCCAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000489194.5
ENST00000496393.2
CDS CAA 90 bp TCAGGATTTTTCTTCTGCTGTTCCTGTAGCTTCATTAAGACTCTATaGACTGCACACATTGCTGCCTCTCGGCACAGTGCCATGAGATCA +
Preference number: 6 (lower is better)
Translates to: SGFFFCCSCSFIKTL*TAHIAASRHSAMRS
Trigger: TGATCTCATGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAATAGAGTCTTAATGAAGCTACAGGAACAGCAGAAGAAAAATCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000462893.1
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 90 bp ATATCTGCCCATGTCACATTAGGGACAGTGACAAAGCCTTCCCTTTaGGCAGAGGGTTGGACTGAGGATAGAGCAACAATGAAATCATTC +
Preference number: 6 (lower is better)
Translates to: ISAHVTLGTVTKPSL*AEGWTEDRATMKSF
Trigger: GAATGATTTCATTGTTGCTCTATCCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGTCACTGTCCCTAATGTGACATGGGCAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS GCA 72 bp ATGAAATCATTCAGTTCAATGCACAGTCCTTGCATCTaGTCCTCTGAGAGGGGATCTTGGTCTCTTAGCAAC +
Preference number: 6 (lower is better)
Translates to: MKSFSSMHSPCI*SSERGSWSLSN
Trigger: GTTGCTAAGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGAACTGAATGATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CCA 72 bp CTTCATCAAAGAATATCACACAGGGTGCTGAGTTCTTaGCTCGTTGAAAAACTTGTCGCACAGCACGTTCAC +
Preference number: 6 (lower is better)
Translates to: LHQRISHRVLSS*LVEKLVAQHVH
Trigger: GTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTCAGCACCCTGTGTGATATTCTTTGATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 72 bp GTCATATCATTGCCTCCCACATCTTCAAACTTCACGTaGGAGATCTGGAATTCTAACCCCCTGGCTTTAGCT +
Preference number: 6 (lower is better)
Translates to: VISLPPTSSNFT*EIWNSNPLALA
Trigger: AGCTAAAGCCAGGGGGTTAGAATTCCAGATCTCCAACGTGAAGTTTGAAGATGTGGGAGGCAATGATATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000436927.5
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000488718.5
ENST00000492281.5
CDS CAA 90 bp AACCTTGAGTTCACGTATAGCAATCACAGCGAAGGTCACCAGCAATaGCTTCCAAATTTACATCTGCATCCAGTGGTGGTTTGGTACCAT +
Preference number: 6 (lower is better)
Translates to: NLEFTYSNHSEGHQQ*LPNLHLHPVVVWYH
Trigger: ATGGTACCAAACCACCACTGGATGCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTCGCTGTGATTGCTATACGTGAACTCAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489194.5
CDS CAA 90 bp GCACGTTCACTCTCACCAACATACATGTTTAGTAATTCGGGGCCCTaGACAGATATAAAATTTAGTCCGGACTCATTTGCAACAGCCTTC +
Preference number: 6 (lower is better)
Translates to: ARSLSPTYMFSNSGP*TDIKFSPDSFATAF
Trigger: GAAGGCTGTTGCAAATGAGTCCGGACTAAATTTTATATCTGTCAAGGGCCCCGAATTACTAAACATGTATGTTGGTGAGAGTGAACGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 90 bp TGTTCATGTGATTTGCTGACTGTGGATCTGGGTAGTCTTCCATACTaGAATCATCATCAGAATAGCTTTCAGTATACCTGTGAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: CSCDLLTVDLGSLPY*NHHQNSFQYTCEAA
Trigger: CGCAGCCTCACAGGTATACTGAAAGCTATTCTGATGATGATTCAAGTATGGAAGACTACCCAGATCCACAGTCAGCAAATCACATGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461466.5
ENST00000461546.2
CDS CCA 72 bp AGCCTGTTTTGGAACTTATCCGTGGTGTTGAAGAGGTaGTTTCTCTTTGCTCCATCTCAGGAGTATTTGAAA +
Preference number: 6 (lower is better)
Translates to: SLFWNLSVVLKR*FLFAPSQEYLK
Trigger: TTTCAAATACTCCTGAGATGGAGCAAAGAGAAACCACCTCTTCAACACCACGGATAAGTTCCAAAACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000436927.5
ENST00000461466.5
ENST00000467882.5
ENST00000470903.5
ENST00000482491.5
ENST00000492281.5
ENST00000498767.1
CDS CAA 72 bp GACAGAGCGAGACGTCATTATCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTTCATCTTCTAATTCTG +
Preference number: 6 (lower is better)
Translates to: DRARRHYPLHLV*PFLPNVHLLIL
Trigger: CAGAATTAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAATGACGTCTCGCTCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000436927.5
ENST00000461466.5
ENST00000461546.2
ENST00000487758.5
CDS CAA 72 bp CTCTCACCAACATACATGTTTAGTAATTCGGGGCCCTaGACAGATATAAAATTTAGTCCGGACTCATTTGCA +
Preference number: 6 (lower is better)
Translates to: LSPTYMFSNSGP*TDIKFSPDSFA
Trigger: TGCAAATGAGTCCGGACTAAATTTTATATCTGTCAAGGGCCCCGAATTACTAAACATGTATGTTGGTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281701.11
ENST00000340871.8
ENST00000391875.6
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
CDS CAA 72 bp GATTTGCTGACTGTGGATCTGGGTAGTCTTCCATACTaGAATCATCATCAGAATAGCTTTCAGTATACCTGT +
Preference number: 6 (lower is better)
Translates to: DLLTVDLGSLPY*NHHQNSFQYTC
Trigger: ACAGGTATACTGAAAGCTATTCTGATGATGATTCAAGTATGGAAGACTACCCAGATCCACAGTCAGCAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461466.5
ENST00000461546.2
CDS CAA 72 bp GATTTGCTGACTGTGGATCTGGGTAGTCTTCCATACTaGAATCATCATCAGAATAGCTTTCAGTATACCTCA +
Preference number: 6 (lower is better)
Translates to: DLLTVDLGSLPY*NHHQNSFQYTS
Trigger: TGAGGTATACTGAAAGCTATTCTGATGATGATTCAAGTATGGAAGACTACCCAGATCCACAGTCAGCAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498767.1
CDS CAA 90 bp TGTTCATGTGATTTGCTGACTGTGGATCTGGGTAGTCTTCCATACTaGAATCATCATCAGAATAGCTTTCAGTATACCTCAGTAAAAGGA +
Preference number: 6 (lower is better)
Translates to: CSCDLLTVDLGSLPY*NHHQNSFQYTSVKG
Trigger: TCCTTTTACTGAGGTATACTGAAAGCTATTCTGATGATGATTCAAGTATGGAAGACTACCCAGATCCACAGTCAGCAAATCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498767.1
CDS CCA 72 bp ACCAGCAATTGCTTCCAAATTTACATCTGCATCCAGTaGTGGTTTGGTACCATTCTAAGTAAGAGAGAAAAA +
Preference number: 6 (lower is better)
Translates to: TSNCFQIYICIQ*WFGTILSKREK
Trigger: TTTTTCTCTCTTACTTAGAATGGTACCAAACCACCACTGGATGCAGATGTAAATTTGGAAGCAATTGCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493060.5
CDS CAA 72 bp GATTTGCTGACTGTGGATCTGGGTAGTCTTCCATACTaGAATCATCATCAGAATAGCTTTCAGTATACTCAT +
Preference number: 6 (lower is better)
Translates to: DLLTVDLGSLPY*NHHQNSFQYTH
Trigger: ATGAGTATACTGAAAGCTATTCTGATGATGATTCAAGTATGGAAGACTACCCAGATCCACAGTCAGCAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000467882.5
ENST00000482491.5
CDS CAA 90 bp TGTTCATGTGATTTGCTGACTGTGGATCTGGGTAGTCTTCCATACTaGAATCATCATCAGAATAGCTTTCAGTATACTCATTATCCTCTT +
Preference number: 6 (lower is better)
Translates to: CSCDLLTVDLGSLPY*NHHQNSFQYTHYPL
Trigger: AAGAGGATAATGAGTATACTGAAAGCTATTCTGATGATGATTCAAGTATGGAAGACTACCCAGATCCACAGTCAGCAAATCACATGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000467882.5
ENST00000482491.5
CDS CAA 72 bp AGCTTTCAGTATACTCATTATCCTCTTCACCTTGTCTaGCCCTTTTTGCCAAATGTTCATCTTCTAATTCTG +
Preference number: 6 (lower is better)
Translates to: SFQYTHYPLHLV*PFLPNVHLLIL
Trigger: CAGAATTAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATAATGAGTATACTGAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000281701.11
ENST00000391875.6
ENST00000467882.5
ENST00000469075.5
ENST00000469968.5
ENST00000482491.5
ENST00000488718.5