RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUSAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137804

Ensembl transcript IDs: ENST00000260359.10, ENST00000414849.6, ENST00000450592.6, ENST00000557840.5, ENST00000558123.5, ENST00000558582.5, ENST00000559046.5, ENST00000559596.6, ENST00000559659.1, ENST00000560177.5, ENST00000560318.1, ENST00000560747.5, ENST00000560898.5, ENST00000668273.1

Found 612 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGGACAGTCTTGCACCTTCTCCTTGTTTTGGTGACATGGCCAAGTaGCTGTCTCTCAGCTTCTTCCTGGTTGCTGATCTGTATCTCAGT +
Preference number: 1 (lower is better)
Translates to: TDSLAPSPCFGDMAK*LSLSFFLVADLYLS
Trigger: ACTGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAGACAGCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559046.5
3UTR-3UTR TCA 90 bp TCAGGGTCCACACGGACAGTCTTGCACCTTCTCCTTGTTTTGGTGACATGGCCAAGCTACTCAGGAGGCTaGGGCAGGAGAATCGCTTTA +
Preference number: 2 (lower is better)
Translates to: SGSTRTVLHLLLVLVTWPSYSGG*GRRIAL
Trigger: TAAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCT...TGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559046.5
3UTR-3UTR GCA 90 bp TTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: FPVMVFNLCVPSTASPFGRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...CCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
3UTR-3UTR CCA 90 bp GTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGCCCTTCTGGCTGGAGTCTTaGTCAGTGAACGCTTATGCT +
Preference number: 2 (lower is better)
Translates to: VMVFNLCVPSTASPFGVPFWLES*SVNAYA
Trigger: AGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAA...GGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
3UTR CAA 90 bp GTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGCTCATTATCTTTAGTAGCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: VPPDTVTCADFLAGV*VSERLCSLSLVAAE
Trigger: TTCAGCTGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
3UTR-3UTR CCA 90 bp GAATTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: EFPVMVFNLCVPSTASPFHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...AAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
3UTR-3UTR CCA 90 bp CATGATTCTGTGAGTCAGGGTCCACACGGACAGTCTTGCACCTTCTCCTTGTTTCTCTCAGCTTCTTCCTaGTTGCTGATCTGTATCTCA +
Preference number: 2 (lower is better)
Translates to: HDSVSQGPHGQSCTFSLFLSASS*LLICIS
Trigger: TGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAG...AAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTCACAGAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559046.5
3UTR-3UTR CCA 90 bp AATGGGGTAATAACAGCAGCAGAATTCCCCGTGATGGTCTTTAATTTGTGTGTCCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: NGVITAAEFPVMVFNLCVHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...GACACACAAATTAAAGACCATCACGGGGAATTCTGCTGCTGTTATTACCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557840.5
3UTR-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCAGAGATCATAGCACATaGAGAACCCATGGACACTAC +
Preference number: 2 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFRDHST*RTHGHY
Trigger: GTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR GCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACTGCCATCAGGTAAATaGTATTGGCTAGCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTLPSGK*YWLAED
Trigger: GTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCTGCCATCAGGTAAATaGTATTGGCTAGCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFLPSGK*YWLAED
Trigger: GTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR GCA 90 bp GAATTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGTCAGTGAACGCTTATaGTCATTATCTTTAGTAGCA +
Preference number: 2 (lower is better)
Translates to: EFPVMVFNLCVPSTASPFVSERL*SLSLVA
Trigger: TGCTACTAAAGATAATGAGCATAAGCGTTCACTGAC...AAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
3UTR-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAAAGAAGTACATTTGGTaGAGTTTGAGACCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTKKYIW*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCCACCAAATGTACTTCTT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGCTTGCATAACTAGCTaGCATCAGGTAAATGCTATT +
Preference number: 2 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFACITS*HQVNAI
Trigger: AATAGCATTTACCTGATGGCAGCTAGTTATGCAAGC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACCAGCAGGGGGAACTTaGGAACTTGACATTAAAAAT +
Preference number: 2 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTPAGGT*ELDIKN
Trigger: ATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCCAGCAGGGGGAACTTaGGAACTTGACATTAAAAAT +
Preference number: 2 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFPAGGT*ELDIKN
Trigger: ATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTCAGGTAAATGCTATTaGCTAGCAGAAGACTGCAGT +
Preference number: 2 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFSGKCY*LAEDCS
Trigger: ACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCACACTACACAGACTATaGACAGTTAGCAGAAAAAGA +
Preference number: 2 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFTLHRL*TVSRKR
Trigger: TCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAGAGATCATAGCACATaGAGAACCCATGGACACTAC +
Preference number: 2 (lower is better)
Translates to: LSIPAYPILVIVQILLKLRDHST*RTHGHY
Trigger: GTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGTCTCGTTAGAAACCTaGATTGTTAATGGACTTAAG +
Preference number: 2 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTVSLET*IVNGLK
Trigger: CTTAAGTCCATTAACAATTCAGGTTTCTAACGAGAC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGTCTCGTTAGAAACCTaGATTGTTAATGGACTTAAG +
Preference number: 2 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFVSLET*IVNGLK
Trigger: CTTAAGTCCATTAACAATTCAGGTTTCTAACGAGAC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATTACATGAGGATATTTaGACGAAGGTACATAAGCCT +
Preference number: 2 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTLHEDI*TKVHKP
Trigger: AGGCTTATGTACCTTCGTTCAAATATCCTCATGTAA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTACACTACACAGACTATaGACAGTTAGCAGAAAAAGA +
Preference number: 2 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNITLHRL*TVSRKR
Trigger: TCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCCAGCAGGGGGAACTTaGGAACTTGACATTAAAAAT +
Preference number: 2 (lower is better)
Translates to: LSIPAYPILVIVQILLKLPAGGT*ELDIKN
Trigger: ATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCCAGCAGGGGGAACTTaGGAACTTGACATTAAAAAT +
Preference number: 2 (lower is better)
Translates to: GNYMRIFERRYISLNNFTPAGGT*ELDIKN
Trigger: ATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCATATTCTATAGAGAGTaGAGAGGTGGCCTTTCTATC +
Preference number: 2 (lower is better)
Translates to: GNYMRIFERRYISLNNFTIFYRE*RGGLSI
Trigger: GATAGAAAGGCCACCTCTTCACTCTCTATAGAATAT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCACACTACACAGACTATaGACAGTTAGCAGAAAAAGA +
Preference number: 2 (lower is better)
Translates to: GNYMRIFERRYISLNNFTTLHRL*TVSRKR
Trigger: TCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTGTCTCGTTAGAAACCTaGATTGTTAATGGACTTAAG +
Preference number: 2 (lower is better)
Translates to: LSIPAYPILVIVQILLKLVSLET*IVNGLK
Trigger: CTTAAGTCCATTAACAATTCAGGTTTCTAACGAGAC...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCATAACCAAACTATATaGCCCCGTTTCATAAAGGTT +
Preference number: 2 (lower is better)
Translates to: GNYMRIFERRYISLNNFTHNQTI*PRFIKV
Trigger: AACCTTTATGAAACGGGGCCATATAGTTTGGTTATG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR CCA 72 bp GGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCAT +
Preference number: 3 (lower is better)
Translates to: GCPQTRSHVQTF*LESWSVNAYAH
Trigger: ATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
3UTR CCA 72 bp GTGACATGGCCAAGTGGCTGTCTCTCAGCTTCTTCCTaGTTGCTGATCTGTATCTCAGTCTCATCACAAGAG +
Preference number: 3 (lower is better)
Translates to: VTWPSGCLSASS*LLICISVSSQE
Trigger: CTCTTGTGATGAGACTGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAGACAGCCACTTGGCCATGTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559046.5
3UTR-3UTR CAA 90 bp CGTTGCCTCAGTTGTCAACTTGAATGGGGTAATAACAGCAGCAGAATTCCCCGTTTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGC +
Preference number: 3 (lower is better)
Translates to: RCLSCQLEWGNNSSRIPRFLAGV*VSERLC
Trigger: GCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA...ACGGGGAATTCTGCTGCTGTTATTACCCCATTCAAGTTGACAACTGAGGCAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557840.5
3UTR-3UTR CAA 90 bp CATGATTCTGTGAGTCAGGGTCCACACGGACAGTCTTGCACCTTCTCCTTGTTTTCAGCTTCTTCCTGGTaGCTGATCTGTATCTCAGTC +
Preference number: 3 (lower is better)
Translates to: HDSVSQGPHGQSCTFSLFSASSW*LICISV
Trigger: GACTGAGATACAGATCAGCAACCAGGAAGAAGCTGA...AAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTCACAGAATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559046.5
3UTR TCA 72 bp CCCATGGTTTTAGCTTTCCAGCAGCAGAATTCCCCGTaGTGGTCTTTAATTTGTGTGTCCCAAGCACAGCCT +
Preference number: 3 (lower is better)
Translates to: PMVLAFQQQNSP*WSLICVSQAQP
Trigger: AGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAATTCTGCTGCTGGAAAGCTAAAACCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560898.5
3UTR GCA 72 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTaGAGTTCTGTTAATATTAGAACCAGCAGGGGGAAC +
Preference number: 3 (lower is better)
Translates to: LPSGKCYWLAED*SSVNIRTSRGN
Trigger: GTTCCCCCTGCTGGTTCTAATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR GCA 72 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATaGTCATTATCTTTAGTAGCAGCTGAAAACCTGACA +
Preference number: 3 (lower is better)
Translates to: DFLAGVLVSERL*SLSLVAAENLT
Trigger: TGTCAGGTTTTCAGCTGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557840.5
3UTR-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCACCATCCCAAAGAATTaGAGCTTTAAGGTGATAACG +
Preference number: 3 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFTIPKN*SFKVIT
Trigger: CGTTATCACCTTAAAGCTCAAATTCTTTGGGATGGT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR TCA 72 bp GACGATCTTGAGCAGTATAAAACTCAGAAGCTCCACTaGGGTGAAGGAAACATGGACATGATACTAAGCAAA +
Preference number: 3 (lower is better)
Translates to: DDLEQYKTQKLH*GEGNMDMILSK
Trigger: TTTGCTTAGTATCATGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGATCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCACCATCCCAAAGAATTaGAGCTTTAAGGTGATAACG +
Preference number: 3 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFTIPKN*SFKVIT
Trigger: CGTTATCACCTTAAAGCTCAAATTCTTTGGGATGGT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTACCATCCCAAAGAATTaGAGCTTTAAGGTGATAACG +
Preference number: 3 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNITIPKN*SFKVIT
Trigger: CGTTATCACCTTAAAGCTCAAATTCTTTGGGATGGT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACAGCTTACCCTATTCTaGTTATTGTTCAAATTCTCC +
Preference number: 3 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTQLTLF*LLFKFS
Trigger: GGAGAATTTGAACAATAACAAGAATAGGGTAAGCTG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCACCATCCCAAAGAATTaGAGCTTTAAGGTGATAACG +
Preference number: 3 (lower is better)
Translates to: GNYMRIFERRYISLNNFTTIPKN*SFKVIT
Trigger: CGTTATCACCTTAAAGCTCAAATTCTTTGGGATGGT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTACCATCCCAAAGAATTaGAGCTTTAAGGTGATAACG +
Preference number: 3 (lower is better)
Translates to: LSIPAYPILVIVQILLKLTIPKN*SFKVIT
Trigger: CGTTATCACCTTAAAGCTCAAATTCTTTGGGATGGT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR TCA 72 bp ATAGTGAGTGACAGATGGCAATTACATGAGGATATTTaGACGAAGGTACATAAGCCTAAACAATTTCACCTA +
Preference number: 3 (lower is better)
Translates to: IVSDRWQLHEDI*TKVHKPKQFHL
Trigger: TAGGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCCATCTGTCACTCACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
3UTR CCA 72 bp GCAGTTCTGTTAATATTAGAACCAGCAGGGGGAACTTaGGAACTTGACATTAAAAATCTAGAAACAGAATTT +
Preference number: 3 (lower is better)
Translates to: AVLLILEPAGGT*ELDIKNLETEF
Trigger: AAATTCTGTTTCTAGATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGGTTCTAATATTAACAGAACTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: GAPRHGHMCRLSGWSLGQSRALE*PLQTQG
Trigger: ACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCT...CTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR GCA 90 bp TTTGGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGCCACAAGACCGGCCTTaGGAGCGTCGTTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: FGVPPDTVTCADFLAGVLPQDRP*ERRWLM
Trigger: CATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGG...CAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp GGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCACCTTGCGAGCGTCGTTaGCTGATGGGAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GCPQTRSHVQTFWLESWSPCERR*LMGVEA
Trigger: GGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGG...TGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR GCA 90 bp TTTGGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGCAAGGTACTCTGACTTaGAGGGCCACAAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: FGVPPDTVTCADFLAGVLQGTLT*RATRPA
Trigger: GGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTG...CAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp GGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGTCCTCTTGGAGGTACTaGAGTCCTGACCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GAPRHGHMCRLSGWSLGQSSWRY*SPDPSL
Trigger: AAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGA...CTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCCGCCGGCCCGCAGCTaGCGTCTTGGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFPPARS*RLGCSL
Trigger: CAGGCTGCAGCCAAGACGGCAGCTGCGGGCCGGCGG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp TTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGCACAGCCTCGCCTTTTaGGGTGCCCCCAGACACGGT +
Preference number: 4 (lower is better)
Translates to: FPVMVFNLCVPSTASPFGHSLAF*GAPRHG
Trigger: ACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTG...CCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp GTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGCCCCCTTGCGAGCGTCGTTaGCTGATGGGAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VMVFNLCVPSTASPFGVPPCERR*LMGVEA
Trigger: GGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGG...GGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp GGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCTTCTGGCTGGAGTCTTaGTCAGTGAACGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: GVPPDTVTCADFLAGVLVFWLES*SVNAYA
Trigger: AGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAA...GACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR TCA 90 bp CCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: PVMVFNLCVPSTASPFGVRPKVL*LAGPQD
Trigger: GTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCT...CACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR TCA 90 bp GGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCTGGAGTCTTGGTCAGTaGACGCTTATGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: GVPPDTVTCADFLAGVLVWSLGQ*TLMLII
Trigger: GATAATGAGCATAAGCGTTCACTGACCAAGACTCCA...GACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGGGATACGCAGGTGGTaGAGGGGTCCTCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFGIRRW*RGPRRS
Trigger: CGAGCGGCGAGGACCCCTTCACCACCTGCGTATCCC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR GCA 90 bp TTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGCAAGGTACTCTGACTTaGAGGGCCACAAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: FPVMVFNLCVPSTASPFGQGTLT*RATRPA
Trigger: GGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTG...CCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp TTTGGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: FGVPPDTVTCADFLAGVLHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...CAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR TCA 90 bp GGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCACAGCAGAATTCCCCGTaGTGGTCTTTAATTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GCPQTRSHVQTFWLESWSQQNSP*WSLICV
Trigger: CACACAAATTAAAGACCATCACGGGGAATTCTGCTG...TGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp GAGTCAGGGTCCACACGGACAGTCTTGCACCTTCTCCTTGTTTTGGTGACATGGGGAGACCCAGACTCTTaGCTAAGTTCTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: ESGSTRTVLHLLLVLVTWGDPDS*LSSAGH
Trigger: GTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCC...CCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CCA 90 bp GGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGTCCTCTTGGAGGTACTaGAGTCCTGATTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: GAPRHGHMCRLSGWSLGQSSWRY*SPDSHF
Trigger: GAAATGAGAATCAGGACTCCAGTACCTCCAAGAGGA...CTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557840.5
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCGCAGGAGCTGTGCTTaGGGCGGGGCCTGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQRRSCA*GGAWRV
Trigger: TACACGCCAGGCCCCGCCCCAAGCACAGCTCCTGCG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR TCA 90 bp GACATGGCCAAGTGGCTGTCTCTCAGCTTCTTCCTGGTTGCTGATCTGTATCTCAGCTACTCAGGAGGCTaGGGCAGGAGAATCGCTTTA +
Preference number: 4 (lower is better)
Translates to: DMAKWLSLSFFLVADLYLSYSGG*GRRIAL
Trigger: TAAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCT...GAGATACAGATCAGCAACCAGGAAGAAGCTGAGAGACAGCCACTTGGCCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR GCA 90 bp TCAGGGTCCACACGGACAGTCTTGCACCTTCTCCTTGTTTTGGTGACATGGCCACCACACGGACAGTCTTaGACCTTCTCCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SGSTRTVLHLLLVLVTWPPHGQS*TFSLFW
Trigger: CCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGG...TGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR GCA 90 bp GTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGCCCAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VMVFNLCVPSTASPFGVPRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...GGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCACAGCCTCGCCTTTTaGGGTGCCCCCAGACACGGT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFHSLAF*GAPRHG
Trigger: ACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGCTTTCTCCACCGGGTaGCGGAGAACCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFAFSTG*RRTTSQ
Trigger: CTGGGAGGTGGTTCTCCGCCACCCGGTGGAGAAAGC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATCGGTGCACCTCGCCTaGGACCTGTCGCGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTSVHLA*DLSRSL
Trigger: GAGGGACCGCGACAGGTCCCAGGCGAGGTGCACCGA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCCGGCTGCGGGAAGATaGCGGCTCAGCCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTPAAGR*RLSRCG
Trigger: GCCGCAGCGGCTGAGCCGCCATCTTCCCGCAGCCGG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR TCA 90 bp AGCTTTCCAGCAGCAGAATTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: SFPAAEFPVMVFNLCVPSRPKVL*LAGPQD
Trigger: GTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCT...GCTTGGGACACACAAATTAAAGACCATCACGGGGAATTCTGCTGCTGGAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR TCA 90 bp TTTGGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGATCTTTAGTAGCAGCTaGAAACCTGACACCCGTTTT +
Preference number: 4 (lower is better)
Translates to: FGVPPDTVTCADFLAGVLIFSSS*KPDTRF
Trigger: AAAACGGGTGTCAGGTTTTCAGCTGCTACTAAAGAT...CAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557840.5
CDS-3UTR GCA 90 bp TTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGACACCCGTTTTAGCTaGAGAGATAGCAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: FPVMVFNLCVPSTASPFGDTRFS*RDSRAL
Trigger: AAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTC...CCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTGCTCGCCGACTCGGTaGACCTCGCCTGGGACCTGT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNCSPTR*TSPGTC
Trigger: ACAGGTCCCAGGCGAGGTGCACCGAGTCGGCGAGCA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR GCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAAGGAAGGCGCCGGCTaGGGGAAGATGGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTKEGAG*GKMAAQ
Trigger: CTGAGCCGCCATCTTCCCGCAGCCGGCGCCTTCCTT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTGGTTGCCCTCAGGTTaGCCCGGAGACCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFWLPSG*PGDPDS
Trigger: AGAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GACATGGCCAAGTGGCTGTCTCTCAGCTTCTTCCTGGTTGCTGATCTGTATCTCAGGCTTTTAACAACTTaGTTGCCCTCAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: DMAKWLSLSFFLVADLYLRLLTT*LPSGWP
Trigger: GGGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCT...GAGATACAGATCAGCAACCAGGAAGAAGCTGAGAGACAGCCACTTGGCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CCA 90 bp TTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: FPVMVFNLCVPSTASPFGHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...CCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACACAGCCTCGCCTTTTaGGGTGCCCCCAGACACGGT +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTHSLAF*GAPRHG
Trigger: ACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTACACAGCCTCGCCTTTTaGGGTGCCCCCAGACACGGT +
Preference number: 4 (lower is better)
Translates to: DFLAGVLVSERLCSLSLVHSLAF*GAPRHG
Trigger: ACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTG...TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFSRALE*PLQTQG
Trigger: ACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGCCCTGGAGTCTTGGTCAGTaGACGCTTATGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: VMVFNLCVPSTASPFGVPWSLGQ*TLMLII
Trigger: GATAATGAGCATAAGCGTTCACTGACCAAGACTCCA...GGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGCCCATGATGTCCAATaGGGACGCAGGAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFAHDVQ*GRRSCA
Trigger: AGCACAGCTCCTGCGTCCTCATTGGACATCATGGGC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR GCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCCACAAGACCGGCCTTaGGAGCGTCGTTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQPQDRP*ERRWLM
Trigger: CATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACCACAAGACCGGCCTTaGGAGCGTCGTTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTPQDRP*ERRWLM
Trigger: CATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTACCACAAGACCGGCCTTaGGAGCGTCGTTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: DFLAGVLVSERLCSLSLVPQDRP*ERRWLM
Trigger: CATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGG...TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCAAGGTACTCTGACTTaGAGGGCCACAAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFQGTLT*RATRPA
Trigger: GGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGTCAGTGAACGCTTATaGTCATTATCTTTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: GCPQTRSHVQTFWLESWSVSERL*SLSLVA
Trigger: TGCTACTAAAGATAATGAGCATAAGCGTTCACTGAC...TGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR GCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAGCTGCCGTCTTGGCTaGAGCCTGAGAGGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNISCRLG*SLRGAL
Trigger: CAGCGCACCTCTCAGGCTGCAGCCAAGACGGCAGCT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATGGTTGCCCTCAGGTTaGCCCGGAGACCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTWLPSG*PGDPDS
Trigger: AGAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCCTTGCGAGCGTCGTTaGCTGATGGGAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFPCERR*LMGVEA
Trigger: GGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACACAGCCTCGCCTTTTaGGGTGCCCCCAGACACGGT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTHSLAF*GAPRHG
Trigger: ACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCACAGCCTCGCCTTTTaGGGTGCCCCCAGACACGGT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNHSLAF*GAPRHG
Trigger: ACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCACAGCCTCGCCTTTTaGGGTGCCCCCAGACACGGT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVHSLAF*GAPRHG
Trigger: ACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAGGTCCCTCGGGGCCGTaGTCTTCTCCAGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTGPSGP*SSPVSA
Trigger: TGCACTCACTGGAGAAGACCACGGCCCCGAGGGACC...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR TCA 90 bp AGGAACTTTTGCAGTAGCTCTGAGATCCTGGCTTTCCTGCTTTTCATGATTCTGGCAGGTCACTGTACTTaGGGGAGTCCAGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RNFCSSSEILAFLLFMILAGHCT*GSPAPL
Trigger: TAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGC...CAGAATCATGAAAAGCAGGAAAGCCAGGATCTCAGAGCTACTGCAAAAGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR TCA 90 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTAAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: DFLAGVLVSERLCSLSLVSRALE*PLQTQG
Trigger: ACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCT...TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTSRALE*PLQTQG
Trigger: ACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGTCTTGGCTGCAGCCTaGGAGGTGCGCTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVVLAAA*EVRCVP
Trigger: TGGAACACAGCGCACCTCTCAGGCTGCAGCCAAGAC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR GCA 90 bp ACAGTCTTGCACCTTCTCCTTGTTTTGGTGACATGGCCAAGTGGCTGTCTCTCACTCTTGGCTAAGTTCTaGAGGTCACTGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: TVLHLLLVLVTWPSGCLSLLAKF*RSLYLR
Trigger: CCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAG...TGAGAGACAGCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCCACAAGACCGGCCTTaGGAGCGTCGTTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNPQDRP*ERRWLM
Trigger: CATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCCACAAGACCGGCCTTaGGAGCGTCGTTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVPQDRP*ERRWLM
Trigger: CATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCAAGGTACTCTGACTTaGAGGGCCACAAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQQGTLT*RATRPA
Trigger: GGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCAAGGTACTCTGACTTaGAGGGCCACAAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFQGTLT*RATRPA
Trigger: GGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp TTTGGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATaGTCATTATCTTTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FGVPPDTVTCADFLAGVLVSERL*SLSLVA
Trigger: TGCTACTAAAGATAATGAGCATAAGCGTTCACTGAC...CAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR GCA 90 bp GAATTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EFPVMVFNLCVPSTASPFRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...AAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCTGCAGCCTGAGAGGTaGGCTGTGTTCCAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLQPER*AVFQCA
Trigger: TGCGCACTGGAACACAGCGCACCTCTCAGGCTGCAG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTGGCGGCTCAGCCGCTaGGGCATCGCTCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLWRLSR*GIAHVV
Trigger: CACAACGTGAGCGATGCCGCAGCGGCTGAGCCGCCA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTGGTTGCCCTCAGGTTaGCCCGGAGACCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVWLPSG*PGDPDS
Trigger: AGAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp TCTGTATCTCAGTCTCATCACAAGAGGATGCAGAAGTTTGACTTTCATCCTGTATGGTTGCCCTCAGGTTaGCCCGGAGACCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: SVSQSHHKRMQKFDFHPVWLPSG*PGDPDS
Trigger: AGAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCA...TACAGGATGAAAGTCAAACTTCTGCATCCTCTTGTGATGAGACTGAGATACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATGGTTGCCCTCAGGTTaGCCCGGAGACCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTWLPSG*PGDPDS
Trigger: AGAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTCCTCTTGGAGGTACTaGAGTCCTGACCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFSSWRY*SPDPSL
Trigger: AAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCCTTGCGAGCGTCGTTaGCTGATGGGAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFPCERR*LMGVEA
Trigger: GGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCCGCAGCTGCCGTCTTaGCTGCAGCCTGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLPQLPS*LQPERC
Trigger: GCACCTCTCAGGCTGCAGCCAAGACGGCAGCTGCGG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGCTTGGGGCGGGGCCTaGCGTGTATTCGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVAWGGA*RVFERK
Trigger: CTTCCTTTCGAATACACGCCAGGCCCCGCCCCAAGC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGCAGGTCACTGTACTTaGGGGAGTCCAGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFAGHCT*GSPAPL
Trigger: TAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp TTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGTTTTCCAGGTTTGGATaGCTCATCTGTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FPVMVFNLCVPSTASPFGFSRFG*LICVER
Trigger: TCTCTCTACACAGATGAGTCATCCAAACCTGGAAAA...CCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFRPKVL*LAGPQD
Trigger: GTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNISRALE*PLQTQG
Trigger: ACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCACATTTGGTGGAGTTTaGGACCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFTFGGV*DQPGQH
Trigger: GTGTTGCCCAGGCTGGTCTCAAACTCCACCAAATGT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCACAGTGTCACGCAGTaGTCGCCGACTCGGTGCACC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTHSVTQ*SPTRCT
Trigger: GGTGCACCGAGTCGGCGAGCACTGCGTGACACTGTG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTGCGCTGTGTTCCAGTaGGCACAGTGTCACGCAGTG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNCAVFQ*AQCHAV
Trigger: CACTGCGTGACACTGTGCGCACTGGAACACAGCGCA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTGTTCAGGTAACGAGTaGGCGGACTCGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFCSGNE*ADSDSS
Trigger: ACTGGAGTCCGAGTCCGCGCACTCGTTACCTGAACA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGGAGACCCAGACTCTTaGCTAAGTTCTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFGDPDS*LSSAGH
Trigger: GTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp TTTGGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGAAGCTTCTTAAAGTTTaGAGTAGTGATTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: FGVPPDTVTCADFLAGVLKLLKV*SSDCSS
Trigger: AGAACTGCAATCACTACTCCAAACTTTAAGAAGCTT...CAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACCTTGCGAGCGTCGTTaGCTGATGGGAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTPCERR*LMGVEA
Trigger: GGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGCCCAGTTGTCAACTTGAATaGGGTAATAACAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VMVFNLCVPSTASPFGVPSCQLE*GNNSSR
Trigger: TCTGCTGCTGTTATTACCCCATTCAAGTTGACAACT...GGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557840.5
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAACGACCTCCATGGAGTaGGATACGCAGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTTTSME*DTQVVK
Trigger: CTTCACCACCTGCGTATCCCACTCCATGGAGGTCGT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTCGCGCTTCCATTGGTTaGAAATGCCTCAAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIRASIG*KCLKGG
Trigger: CCCGCCTTTGAGGCATTTTCAACCAATGGAAGCGCG...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCGCGCTTCCATTGGTTaGAAATGCCTCAAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNRASIG*KCLKGG
Trigger: CCCGCCTTTGAGGCATTTTCAACCAATGGAAGCGCG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAGCAGGTCACTGTACTTaGGGGAGTCCAGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTAGHCT*GSPAPL
Trigger: TAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGC...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGCAGGTCACTGTACTTaGGGGAGTCCAGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVAGHCT*GSPAPL
Trigger: TAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCTTTTCATGATTCTGTaGGTCAGGGTCCACACGGAC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFLFMIL*VRVHTD
Trigger: GTCCGTGTGGACCCTGACTCACAGAATCATGAAAAG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260359.10
CDS-3UTR TCA 90 bp AGGAACTTTTGCAGTAGCTCTGAGATCCTGGCTTTCCTGCTTTTCATGATTCTGCTTTTCATGATTCTGTaGGTCAGGGTCCACACGGAC +
Preference number: 4 (lower is better)
Translates to: RNFCSSSEILAFLLFMILLFMIL*VRVHTD
Trigger: GTCCGTGTGGACCCTGACTCACAGAATCATGAAAAG...CAGAATCATGAAAAGCAGGAAAGCCAGGATCTCAGAGCTACTGCAAAAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVRPKVL*LAGPQD
Trigger: GTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNRPKVL*LAGPQD
Trigger: GTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTRPKVL*LAGPQD
Trigger: GTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAACATTTGGTGGAGTTTaGGACCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTTFGGV*DQPGQH
Trigger: GTGTTGCCCAGGCTGGTCTCAAACTCCACCAAATGT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCACATTTGGTGGAGTTTaGGACCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFTFGGV*DQPGQH
Trigger: GTGTTGCCCAGGCTGGTCTCAAACTCCACCAAATGT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCCACACGGACAGTCTTaGACCTTCTCCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFPHGQS*TFSLFW
Trigger: CCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFFSASW*SSGGEG
Trigger: TCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGTCTTCTCCAGTGAGTaGAGTGAAGCGTTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFVFSSE*SEAFGK
Trigger: TTTCCCGAACGCTTCACTGCACTCACTGGAGAAGAC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGGAGACCCAGACTCTTaGCTAAGTTCTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTGDPDS*LSSAGH
Trigger: GTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTGGTTGCCCTCAGGTTaGCCCGGAGACCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLWLPSG*PGDPDS
Trigger: AGAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAGGCTTTTAACAACTTaGTTGCCCTCAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFRLLTT*LPSGWP
Trigger: GGGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCCTCTTGGAGGTACTaGAGTCCTGACCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNSSWRY*SPDPSL
Trigger: AAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATCCTCTTGGAGGTACTaGAGTCCTGACCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTSSWRY*SPDPSL
Trigger: AAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTCCTCTTGGAGGTACTaGAGTCCTGACCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVSSWRY*SPDPSL
Trigger: AAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACTTTTACGACCTCCATaGAGTGGGATACGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTLLRPP*SGIRRW
Trigger: CCACCTGCGTATCCCACTCCATGGAGGTCGTAAAAG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCCTCTAGAGAGGGGATaGTCATCGCGATTCGAAATC +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFPLERG*SSRFEI
Trigger: GATTTCGAATCGCGATGATCATCCCCTCTCTAGAGG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLSRALE*PLQTQG
Trigger: ACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTSRALE*PLQTQG
Trigger: ACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTGTGTGGTTCATAGTTaGGGGGACGAGACAAACTTG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFCVVHS*GDETNL
Trigger: CAAGTTTGTCTCGTCCCCTCAACTATGAACCACACA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAAATCTTCAGCCAAAATaGGGCCCCTTCGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTNLQPK*GPFAFP
Trigger: TGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATACATTTGGTGGAGTTTaGGACCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNTFGGV*DQPGQH
Trigger: GTGTTGCCCAGGCTGGTCTCAAACTCCACCAAATGT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAACTCAGAAGCTCCACTaGGGTGAAGGAAACATGGAC +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTTQKLH*GEGNMD
Trigger: GTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGACTCAGAAGCTCCACTaGGGTGAAGGAAACATGGAC +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQTQKLH*GEGNMD
Trigger: GTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGT...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAATTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGAGGTACTGGAGTCCTaGTTCTCATTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EFPVMVFNLCVPSTASPFEVLES*FSFPFL
Trigger: AAGAAAAGGAAATGAGAATCAGGACTCCAGTACCTC...AAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557840.5
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCCACACGGACAGTCTTaGACCTTCTCCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFPHGQS*TFSLFW
Trigger: CCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTFSASW*SSGGEG
Trigger: TCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCAAGGTACTCTGACTTaGAGGGCCACAAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTQGTLT*RATRPA
Trigger: GGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCAAGGTACTCTGACTTaGAGGGCCACAAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLQGTLT*RATRPA
Trigger: GGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGACACCCGTTTTAGCTaGAGAGATAGCAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFDTRFS*RDSRAL
Trigger: AAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp AATGGGGTAATAACAGCAGCAGAATTCCCCGTGATGGTCTTTAATTTGTGTGTCGACACCCGTTTTAGCTaGAGAGATAGCAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: NGVITAAEFPVMVFNLCVDTRFS*RDSRAL
Trigger: AAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTC...GACACACAAATTAAAGACCATCACGGGGAATTCTGCTGCTGTTATTACCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557840.5
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTTGGAGACTGGAGTCTaGGTTGCCTCAGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQLETGV*VASVVN
Trigger: GTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTCGCGTTTCTTCCGTTaGTCTTCCTTTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFSRFFR*SSFVWR
Trigger: TCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTTCTCCTTTCGTTCTTaGTCGCGTTTCTTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFFSFRS*SRFFRC
Trigger: GCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGAGACCCAGACTCTTaGCTAAGTTCTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVGDPDS*LSSAGH
Trigger: GTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAGGAGACCCAGACTCTTaGCTAAGTTCTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTGDPDS*LSSAGH
Trigger: GTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCC...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGGAGACCCAGACTCTTaGCTAAGTTCTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNGDPDS*LSSAGH
Trigger: GTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp AGGAACTTTTGCAGTAGCTCTGAGATCCTGGCTTTCCTGCTTTTCATGATTCTGCTTGTTTTGGTGACATaGCCAAGTGGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RNFCSSSEILAFLLFMILLVLVT*PSGCLS
Trigger: TGAGAGACAGCCACTTGGCCATGTCACCAAAACAAG...CAGAATCATGAAAAGCAGGAAAGCCAGGATCTCAGAGCTACTGCAAAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTTGGTGCTCGTCTGGTaGAGAAGGAACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFLVLVW*RRNFCS
Trigger: ACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTTCTTGGTGCTCGTCTaGTGGAGAAGGAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFFLVLV*WRRNFC
Trigger: GCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCCTTGCGAGCGTCGTTaGCTGATGGGAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLPCERR*LMGVEA
Trigger: GGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTCGGACTCCAGTGCTTaGATTGCCCATGATGTCCAA +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFSDSSA*IAHDVQ
Trigger: TTGGACATCATGGGCAATCCAAGCACTGGAGTCCGA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
3UTR CAA 72 bp GACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGCTCATTATCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: DTVTCADFLAGV*VSERLCSLSLV
Trigger: TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTGCAGGTCACTGTACTTaGGGGAGTCCAGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLAGHCT*GSPAPL
Trigger: TAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGC...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCGCAGGTCACTGTACTTaGGGGAGTCCAGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTAGHCT*GSPAPL
Trigger: TAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGC...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLRPKVL*LAGPQD
Trigger: GTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTGGAGTCTTGGTCAGTaGACGCTTATGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFWSLGQ*TLMLII
Trigger: GATAATGAGCATAAGCGTTCACTGACCAAGACTCCA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTGTGTGGTTCATAGTTaGGGGGACGAGACAAACTTG +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQCVVHS*GDETNL
Trigger: CAAGTTTGTCTCGTCCCCTCAACTATGAACCACACA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTGTGTGGTTCATAGTTaGGGGGACGAGACAAACTTG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFCVVHS*GDETNL
Trigger: CAAGTTTGTCTCGTCCCCTCAACTATGAACCACACA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAATCTTCAGCCAAAATaGGGCCCCTTCGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTNLQPK*GPFAFP
Trigger: TGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATAATCTTCAGCCAAAATaGGGCCCCTTCGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNNLQPK*GPFAFP
Trigger: TGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGAATCTTCAGCCAAAATaGGGCCCCTTCGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVNLQPK*GPFAFP
Trigger: TGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAGAGATCATAGCACATaGAGAACCCATGGACACTAC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFRDHST*RTHGHY
Trigger: GTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTACTCAGAAGCTCCACTaGGGTGAAGGAAACATGGAC +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNITQKLH*GEGNMD
Trigger: GTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCTCTTGGCTAAGTTCTaGAGGTCACTGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFLLAKF*RSLYLR
Trigger: CCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCCACACGGACAGTCTTaGACCTTCTCCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNPHGQS*TFSLFW
Trigger: CCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTCCACACGGACAGTCTTaGACCTTCTCCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIPHGQS*TFSLFW
Trigger: CCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGG...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTGGAGAAGGAACTTTTaGAGTAGCTCTGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFWRRNF*SSSEIL
Trigger: CAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTFSASW*SSGGEG
Trigger: TCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNFSASW*SSGGEG
Trigger: TCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVFSASW*SSGGEG
Trigger: TCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGACACCCGTTTTAGCTaGAGAGATAGCAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVDTRFS*RDSRAL
Trigger: AAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGACACCCGTTTTAGCTaGAGAGATAGCAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNDTRFS*RDSRAL
Trigger: AAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGGACTGGAGTCTGCGTTaGCTCAGTTGTCAACTTGAA +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQDWSLR*LSCQLE
Trigger: TTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTC...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGACTGGAGTCTGCGTTaGCTCAGTTGTCAACTTGAA +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTDWSLR*LSCQLE
Trigger: TTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGACTGGAGTCTGCGTTaGCTCAGTTGTCAACTTGAA +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFDWSLR*LSCQLE
Trigger: TTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTTGGAGACTGGAGTCTaGGTTGCCTCAGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVLETGV*VASVVN
Trigger: GTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTCGCGTTTCTTCCGTTaGTCTTCCTTTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFSRFFR*SSFVWR
Trigger: TCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTCGCGTTTCTTCCGTTaGTCTTCCTTTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQSRFFR*SSFVWR
Trigger: TCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTCTCCTTTCGTTCTTaGTCGCGTTTCTTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFFSFRS*SRFFRC
Trigger: GCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTTCTCCTTTCGTTCTTaGTCGCGTTTCTTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQFSFRS*SRFFRC
Trigger: GCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAGGCTTTTAACAACTTaGTTGCCCTCAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTRLLTT*LPSGWP
Trigger: GGGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGAGGCTTTTAACAACTTaGTTGCCCTCAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVRLLTT*LPSGWP
Trigger: GGGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp AGGAACTTTTGCAGTAGCTCTGAGATCCTGGCTTTCCTGCTTTTCATGATTCTGCTCTCAGCTTCTTCCTaGTTGCTGATCTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: RNFCSSSEILAFLLFMILLSASS*LLICIS
Trigger: TGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAG...CAGAATCATGAAAAGCAGGAAAGCCAGGATCTCAGAGCTACTGCAAAAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCTCTCAGCTTCTTCCTaGTTGCTGATCTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFLSASS*LLICIS
Trigger: TGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCTTGTTTTGGTGACATaGCCAAGTGGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQLVLVT*PSGCLS
Trigger: TGAGAGACAGCCACTTGGCCATGTCACCAAAACAAG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGGTGCTCGTCTGGTaGAGAAGGAACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFLVLVW*RRNFCS
Trigger: ACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTTGGTGCTCGTCTGGTaGAGAAGGAACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQLVLVW*RRNFCS
Trigger: ACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATTCTGGCTGGAGTCTTaGTCAGTGAACGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTFWLES*SVNAYA
Trigger: AGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTATTCTGGCTGGAGTCTTaGTCAGTGAACGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: DFLAGVLVSERLCSLSLVFWLES*SVNAYA
Trigger: AGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAA...TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCACACTGGTTTCTTATTaGAGACTGGAGTCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFTLVSY*RLESAL
Trigger: CAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAGAAGTACATTTGGTaGAGTTTGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFKKYIW*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCCACCAAATGTACTTCTT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCATCTTTAGTAGCAGCTaGAAACCTGACACCCGTTTT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFIFSSS*KPDTRF
Trigger: AAAACGGGTGTCAGGTTTTCAGCTGCTACTAAAGAT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTGGAGTCTTGGTCAGTaGACGCTTATGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFWSLGQ*TLMLII
Trigger: GATAATGAGCATAAGCGTTCACTGACCAAGACTCCA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCAGCAGAATTCCCCGTaGTGGTCTTTAATTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFQQNSP*WSLICV
Trigger: CACACAAATTAAAGACCATCACGGGGAATTCTGCTG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACAGCAGAATTCCCCGTaGTGGTCTTTAATTTGTGTG +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTQQNSP*WSLICV
Trigger: CACACAAATTAAAGACCATCACGGGGAATTCTGCTG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATGTGTGGTTCATAGTTaGGGGGACGAGACAAACTTG +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTCVVHS*GDETNL
Trigger: CAAGTTTGTCTCGTCCCCTCAACTATGAACCACACA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTGTGTGGTTCATAGTTaGGGGGACGAGACAAACTTG +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVCVVHS*GDETNL
Trigger: CAAGTTTGTCTCGTCCCCTCAACTATGAACCACACA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTGTGTGGTTCATAGTTaGGGGGACGAGACAAACTTG +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNICVVHS*GDETNL
Trigger: CAAGTTTGTCTCGTCCCCTCAACTATGAACCACACA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGAGAGATCATAGCACATaGAGAACCCATGGACACTAC +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQRDHST*RTHGHY
Trigger: GTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCT...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTACATTTGGTGGAGTTTaGGACCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLTFGGV*DQPGQH
Trigger: GTGTTGCCCAGGCTGGTCTCAAACTCCACCAAATGT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTAATCTTTAGTAGCAGCTaGAAACCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DFLAGVLVSERLCSLSLVIFSSS*KPVVPA
Trigger: AGCTGGGACTACAGGTTTTCAGCTGCTACTAAAGAT...TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTGCTTGGATTGCCCATaGTGTCCAATGAGGACGCAG +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTCLDCP*CPMRTQ
Trigger: CTGCGTCCTCATTGGACATCATGGGCAATCCAAGCA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR GCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTCTCTTGGCTAAGTTCTaGAGGTCACTGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNILLAKF*RSLYLR
Trigger: CCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAG...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATGGAGAAGGAACTTTTaGAGTAGCTCTGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTWRRNF*SSSEIL
Trigger: CAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTGGAGAAGGAACTTTTaGAGTAGCTCTGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFWRRNF*SSSEIL
Trigger: CAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCCCTTATTGATGGGCTaGTGCTTCAGTTCATTCATG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFPLLMG*CFSSFM
Trigger: CATGAATGAACTGAAGCAGCAGCCCATCAATAAGGG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260359.10
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGACTGGAGTCTGCGTTaGCTCAGTTGTCAACTTGAA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVDWSLR*LSCQLE
Trigger: TTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGGGACGAGACAAACTTaGTTTAAGATCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFGTRQT*FKIKHW
Trigger: CCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTCGCGTTTCTTCCGTTaGTCTTCCTTTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVSRFFR*SSFVWR
Trigger: TCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATCGCGTTTCTTCCGTTaGTCTTCCTTTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTSRFFR*SSFVWR
Trigger: TCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTATGCCGCGCTTCCATTaGTTGAAAATGCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIMPRFH*LKMPQR
Trigger: CCTTTGAGGCATTTTCAACCAATGGAAGCGCGGCAT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAATGCCGCGCTTCCATTaGTTGAAAATGCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTMPRFH*LKMPQR
Trigger: CCTTTGAGGCATTTTCAACCAATGGAAGCGCGGCAT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR CCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTGCGATACTCGGAAGATaGATCACCAAACTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIAILGR*ITKLRQ
Trigger: CTGACGAAGTTTGGTGATCCATCTTCCGAGTATCGC...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp TCTGTATCTCAGTCTCATCACAAGAGGATGCAGAAGTTTGACTTTCATCCTGTAGCGATACTCGGAAGATaGATCACCAAACTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: SVSQSHHKRMQKFDFHPVAILGR*ITKLRQ
Trigger: CTGACGAAGTTTGGTGATCCATCTTCCGAGTATCGC...TACAGGATGAAAGTCAAACTTCTGCATCCTCTTGTGATGAGACTGAGATACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCTCTCAGCTTCTTCCTaGTTGCTGATCTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQLSASS*LLICIS
Trigger: TGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCTCTCAGCTTCTTCCTaGTTGCTGATCTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFLSASS*LLICIS
Trigger: TGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCTTGTTTTGGTGACATaGCCAAGTGGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLVLVT*PSGCLS
Trigger: TGAGAGACAGCCACTTGGCCATGTCACCAAAACAAG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCTTGTTTTGGTGACATaGCCAAGTGGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVLVLVT*PSGCLS
Trigger: TGAGAGACAGCCACTTGGCCATGTCACCAAAACAAG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACTTGTTTTGGTGACATaGCCAAGTGGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTLVLVT*PSGCLS
Trigger: TGAGAGACAGCCACTTGGCCATGTCACCAAAACAAG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTTGGTGCTCGTCTGGTaGAGAAGGAACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLVLVW*RRNFCS
Trigger: ACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATTGGTGCTCGTCTGGTaGAGAAGGAACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTLVLVW*RRNFCS
Trigger: ACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTTGGTGCTCGTCTGGTaGAGAAGGAACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNILVLVW*RRNFCS
Trigger: ACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTTCTTGGTGCTCGTCTaGTGGAGAAGGAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVFLVLV*WRRNFC
Trigger: GCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATTCTTGGTGCTCGTCTaGTGGAGAAGGAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTFLVLV*WRRNFC
Trigger: GCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTTCTTGGTGCTCGTCTaGTGGAGAAGGAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNFLVLV*WRRNFC
Trigger: GCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATTCTGGCTGGAGTCTTaGTCAGTGAACGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTFWLES*SVNAYA
Trigger: AGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTTCTGGCTGGAGTCTTaGTCAGTGAACGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVFWLES*SVNAYA
Trigger: AGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTTCTTATTGGAGACTaGAGTCTGCGTTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFFLIGD*SLRCLS
Trigger: ACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAACACTGGTTTCTTATTaGAGACTGGAGTCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTTLVSY*RLESAL
Trigger: CAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCACACTGGTTTCTTATTaGAGACTGGAGTCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFTLVSY*RLESAL
Trigger: CAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTCAGGTAAATGCTATTaGCTAGCAGAAGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFSGKCY*LAEDCS
Trigger: ACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGAAGAAGTACATTTGGTaGAGTTTGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQKKYIW*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCCACCAAATGTACTTCTT...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATTTTCCAGGTTTGGATaGCTCATCTGTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTFSRFG*LICVER
Trigger: TCTCTCTACACAGATGAGTCATCCAAACCTGGAAAA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTTTCCAGGTTTGGATaGCTCATCTGTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFFSRFG*LICVER
Trigger: TCTCTCTACACAGATGAGTCATCCAAACCTGGAAAA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTTTTCCAGGTTTGGATaGCTCATCTGTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQFSRFG*LICVER
Trigger: TCTCTCTACACAGATGAGTCATCCAAACCTGGAAAA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATGGAGTCTTGGTCAGTaGACGCTTATGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTWSLGQ*TLMLII
Trigger: GATAATGAGCATAAGCGTTCACTGACCAAGACTCCA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTGGAGTCTTGGTCAGTaGACGCTTATGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNWSLGQ*TLMLII
Trigger: GATAATGAGCATAAGCGTTCACTGACCAAGACTCCA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCAGCAGAATTCCCCGTaGTGGTCTTTAATTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVQQNSP*WSLICV
Trigger: CACACAAATTAAAGACCATCACGGGGAATTCTGCTG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAATCTTCAGCCAAAATaGGGCCCCTTCGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLNLQPK*GPFAFP
Trigger: TGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCAATCTTCAGCCAAAATaGGGCCCCTTCGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTNLQPK*GPFAFP
Trigger: TGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAGAGATCATAGCACATaGAGAACCCATGGACACTAC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTRDHST*RTHGHY
Trigger: GTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATAGAGATCATAGCACATaGAGAACCCATGGACACTAC +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNRDHST*RTHGHY
Trigger: GTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCATATTCTATAGAGAGTaGAGAGGTGGCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFIFYRE*RGGLSI
Trigger: GATAGAAAGGCCACCTCTTCACTCTCTATAGAATAT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCAGATGGCAATTACATaGGGATATTTGAACGAAGGT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFQMAIT*GYLNEG
Trigger: ACCTTCGTTCAAATATCCTCATGTAATTGCCATCTG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCACTCAGAAGCTCCACTaGGGTGAAGGAAACATGGAC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTTQKLH*GEGNMD
Trigger: GTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCATTTTTATCTCTGAATaGTTCTGCTGTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFIFISE*FCCESG
Trigger: CCCTGACTCACAGCAGAATCATTCAGAGATAAAAAT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414849.6
ENST00000559596.6
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTGGAGAAGGAACTTTTaGAGTAGCTCTGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVWRRNF*SSSEIL
Trigger: CAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLFSASW*SSGGEG
Trigger: TCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACCCTTATTGATGGGCTaGTGCTTCAGTTCATTCATG +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTPLLMG*CFSSFM
Trigger: CATGAATGAACTGAAGCAGCAGCCCATCAATAAGGG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260359.10
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTCCCTTATTGATGGGCTaGTGCTTCAGTTCATTCATG +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIPLLMG*CFSSFM
Trigger: CATGAATGAACTGAAGCAGCAGCCCATCAATAAGGG...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260359.10
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTGACACCCGTTTTAGCTaGAGAGATAGCAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLDTRFS*RDSRAL
Trigger: AAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTC...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCAGACACGGTCACATGTaGAGACTTTCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTRHGHM*RLSGWS
Trigger: ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTTGGAGACTGGAGTCTaGGTTGCCTCAGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTLETGV*VASVVN
Trigger: GTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTTGGAGACTGGAGTCTaGGTTGCCTCAGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLLETGV*VASVVN
Trigger: GTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGGGGACGAGACAAACTTaGTTTAAGATCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQGTRQT*FKIKHW
Trigger: CCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCC...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCTGCCATCAGGTAAATaGTATTGGCTAGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLPSGK*YWLAED
Trigger: GTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTCTGCCATCAGGTAAATaGTATTGGCTAGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNILPSGK*YWLAED
Trigger: GTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAGGCTTTTAACAACTTaGTTGCCCTCAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLRLLTT*LPSGWP
Trigger: GGGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTCTCTCAGCTTCTTCCTaGTTGCTGATCTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNILSASS*LLICIS
Trigger: TGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAG...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCATGTGCAGACTTTCTaGCTGGAGTCTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLHVQTF*LESWSV
Trigger: CACTGACCAAGACTCCAGCCAGAAAGTCTGCACATG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTTTCTTATTGGAGACTaGAGTCTGCGTTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNFLIGD*SLRCLS
Trigger: ACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATTTCTTATTGGAGACTaGAGTCTGCGTTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTFLIGD*SLRCLS
Trigger: ACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATACACTGGTTTCTTATTaGAGACTGGAGTCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNTLVSY*RLESAL
Trigger: CAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGACACTGGTTTCTTATTaGAGACTGGAGTCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVTLVSY*RLESAL
Trigger: CAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCCAGCAGGGGGAACTTaGGAACTTGACATTAAAAAT +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQPAGGT*ELDIKN
Trigger: ATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTCAGGTAAATGCTATTaGCTAGCAGAAGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQSGKCY*LAEDCS
Trigger: ACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATCAGGTAAATGCTATTaGCTAGCAGAAGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTSGKCY*LAEDCS
Trigger: ACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAAGAAGTACATTTGGTaGAGTTTGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTKKYIW*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCCACCAAATGTACTTCTT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATAAGAAGTACATTTGGTaGAGTTTGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNKKYIW*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCCACCAAATGTACTTCTT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAATAAGAAGTACATTTaGTGGAGTTTGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFNKKYI*WSLRPA
Trigger: GGCTGGTCTCAAACTCCACCAAATGTACTTCTTATT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTTTTCCAGGTTTGGATaGCTCATCTGTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIFSRFG*LICVER
Trigger: TCTCTCTACACAGATGAGTCATCCAAACCTGGAAAA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGATCTTTAGTAGCAGCTaGAAACCTGACACCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVIFSSS*KPDTRF
Trigger: AAAACGGGTGTCAGGTTTTCAGCTGCTACTAAAGAT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTATCTTTAGTAGCAGCTaGAAACCTGACACCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIIFSSS*KPDTRF
Trigger: AAAACGGGTGTCAGGTTTTCAGCTGCTACTAAAGAT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATATCTTTAGTAGCAGCTaGAAACCTGACACCCGTTTT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNIFSSS*KPDTRF
Trigger: AAAACGGGTGTCAGGTTTTCAGCTGCTACTAAAGAT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGTCTCGTTAGAAACCTaGATTGTTAATGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFVSLET*IVNGLK
Trigger: CTTAAGTCCATTAACAATTCAGGTTTCTAACGAGAC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCAGATGGCAATTACATaGGGATATTTGAACGAAGGT +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQQMAIT*GYLNEG
Trigger: ACCTTCGTTCAAATATCCTCATGTAATTGCCATCTG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACAGATGGCAATTACATaGGGATATTTGAACGAAGGT +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTQMAIT*GYLNEG
Trigger: ACCTTCGTTCAAATATCCTCATGTAATTGCCATCTG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCAGATGGCAATTACATaGGGATATTTGAACGAAGGT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFQMAIT*GYLNEG
Trigger: ACCTTCGTTCAAATATCCTCATGTAATTGCCATCTG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACTTTCCTGCTTTTCATaGTTCTGGAATTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTLSCFS*FWNSVG
Trigger: TCCCACTGAATTCCAGAATCATGAAAAGCAGGAAAG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCTTTCCTGCTTTTCATaGTTCTGGAATTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLSCFS*FWNSVG
Trigger: TCCCACTGAATTCCAGAATCATGAAAAGCAGGAAAG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCTTTCCTGCTTTTCATaGTTCTGGAATTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVLSCFS*FWNSVG
Trigger: TCCCACTGAATTCCAGAATCATGAAAAGCAGGAAAG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGATTTTTATCTCTGAATaGTTCTGTGAGTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQIFISE*FCESGS
Trigger: GGACCCTGACTCACAGAATCATTCAGAGATAAAAAT...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560177.5
ENST00000560747.5
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCTCTTGGCTAAGTTCTaGAGGTCACTGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTLLAKF*RSLYLR
Trigger: CCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCTCTTGGCTAAGTTCTaGAGGTCACTGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLLLAKF*RSLYLR
Trigger: CCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGGGACGAGACAAACTTaGTTTAAGATCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNGTRQT*FKIKHW
Trigger: CCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGACGAGACAAACTTaGTTTAAGATCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVGTRQT*FKIKHW
Trigger: CCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTCGCGTTTCTTCCGTTaGTCTTCCTTTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLSRFFR*SSFVWR
Trigger: TCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTTCTCCTTTCGTTCTTaGTCGCGTTTCTTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTFSFRS*SRFFRC
Trigger: GCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTTCTCCTTTCGTTCTTaGTCGCGTTTCTTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLFSFRS*SRFFRC
Trigger: GCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGCTTGCATAACTAGCTaGCATCAGGTAAATGCTATT +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTACITS*HQVNAI
Trigger: AATAGCATTTACCTGATGGCAGCTAGTTATGCAAGC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGCTTGCATAACTAGCTaGCATCAGGTAAATGCTATT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFACITS*HQVNAI
Trigger: AATAGCATTTACCTGATGGCAGCTAGTTATGCAAGC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCGCGATACTCGGAAGATaGATCACCAAACTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTAILGR*ITKLRQ
Trigger: CTGACGAAGTTTGGTGATCCATCTTCCGAGTATCGC...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCTTGTTTTGGTGACATaGCCAAGTGGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLLVLVT*PSGCLS
Trigger: TGAGAGACAGCCACTTGGCCATGTCACCAAAACAAG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTTCTTGGTGCTCGTCTaGTGGAGAAGGAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTFLVLV*WRRNFC
Trigger: GCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTTCTTGGTGCTCGTCTaGTGGAGAAGGAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLFLVLV*WRRNFC
Trigger: GCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTTCTGGCTGGAGTCTTaGTCAGTGAACGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLFWLES*SVNAYA
Trigger: AGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTTCTGGCTGGAGTCTTaGTCAGTGAACGCTTATGCT +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTFWLES*SVNAYA
Trigger: AGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCAGTTGTCAACTTGAATaGGGTAATAACAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFSCQLE*GNNSSR
Trigger: TCTGCTGCTGTTATTACCCCATTCAAGTTGACAACT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACCAGCAGGGGGAACTTaGGAACTTGACATTAAAAAT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTPAGGT*ELDIKN
Trigger: ATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCCAGCAGGGGGAACTTaGGAACTTGACATTAAAAAT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVPAGGT*ELDIKN
Trigger: ATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATCAGGTAAATGCTATTaGCTAGCAGAAGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTSGKCY*LAEDCS
Trigger: ACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAAATAAGAAGTACATTTaGTGGAGTTTGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTNKKYI*WSLRPA
Trigger: GGCTGGTCTCAAACTCCACCAAATGTACTTCTTATT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTATAGACAGTTTAAATaGAGAATGCCGCGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIYRQFK*RMPRFH
Trigger: ATGGAAGCGCGGCATTCTTCATTTAAACTGTCTATA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTGGAGTCTTGGTCAGTaGACGCTTATGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTWSLGQ*TLMLII
Trigger: GATAATGAGCATAAGCGTTCACTGACCAAGACTCCA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTGGAGTCTTGGTCAGTaGACGCTTATGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLWSLGQ*TLMLII
Trigger: GATAATGAGCATAAGCGTTCACTGACCAAGACTCCA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCAGCAGAATTCCCCGTaGTGGTCTTTAATTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLQQNSP*WSLICV
Trigger: CACACAAATTAAAGACCATCACGGGGAATTCTGCTG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGGTCTCGTTAGAAACCTaGATTGTTAATGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQVSLET*IVNGLK
Trigger: CTTAAGTCCATTAACAATTCAGGTTTCTAACGAGAC...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTATATTCTATAGAGAGTaGAGAGGTGGCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIIFYRE*RGGLSI
Trigger: GATAGAAAGGCCACCTCTTCACTCTCTATAGAATAT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATATATTCTATAGAGAGTaGAGAGGTGGCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNIFYRE*RGGLSI
Trigger: GATAGAAAGGCCACCTCTTCACTCTCTATAGAATAT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAATATTCTATAGAGAGTaGAGAGGTGGCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTIFYRE*RGGLSI
Trigger: GATAGAAAGGCCACCTCTTCACTCTCTATAGAATAT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTACATGAGGATATTTaGACGAAGGTACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFLHEDI*TKVHKP
Trigger: AGGCTTATGTACCTTCGTTCAAATATCCTCATGTAA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATATTTTTATCTCTGAATaGTTCTGCTGTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNIFISE*FCCESG
Trigger: CCCTGACTCACAGCAGAATCATTCAGAGATAAAAAT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414849.6
ENST00000559596.6
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTGGAGAAGGAACTTTTaGAGTAGCTCTGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTWRRNF*SSSEIL
Trigger: CAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCCCTTATTGATGGGCTaGTGCTTCAGTTCATTCATG +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTPLLMG*CFSSFM
Trigger: CATGAATGAACTGAAGCAGCAGCCCATCAATAAGGG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260359.10
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGTCAGTGAACGCTTATaGTCATTATCTTTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFVSERL*SLSLVA
Trigger: TGCTACTAAAGATAATGAGCATAAGCGTTCACTGAC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGTCAGTGAACGCTTATaGTCATTATCTTTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTVSERL*SLSLVA
Trigger: TGCTACTAAAGATAATGAGCATAAGCGTTCACTGAC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCTGCCATCAGGTAAATaGTATTGGCTAGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTLPSGK*YWLAED
Trigger: GTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCTGCCATCAGGTAAATaGTATTGGCTAGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLLPSGK*YWLAED
Trigger: GTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTGCTTGCATAACTAGCTaGCATCAGGTAAATGCTATT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIACITS*HQVNAI
Trigger: AATAGCATTTACCTGATGGCAGCTAGTTATGCAAGC...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAGCTTGCATAACTAGCTaGCATCAGGTAAATGCTATT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTACITS*HQVNAI
Trigger: AATAGCATTTACCTGATGGCAGCTAGTTATGCAAGC...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCTCTCAGCTTCTTCCTaGTTGCTGATCTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLLSASS*LLICIS
Trigger: TGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAGCTTCTTAAAGTTTaGAGTAGTGATTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFKLLKV*SSDCSS
Trigger: AGAACTGCAATCACTACTCCAAACTTTAAGAAGCTT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGAGTTGTCAACTTGAATaGGGTAATAACAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVSCQLE*GNNSSR
Trigger: TCTGCTGCTGTTATTACCCCATTCAAGTTGACAACT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAGTTGTCAACTTGAATaGGGTAATAACAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNISCQLE*GNNSSR
Trigger: TCTGCTGCTGTTATTACCCCATTCAAGTTGACAACT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAGTTGTCAACTTGAATaGGGTAATAACAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTSCQLE*GNNSSR
Trigger: TCTGCTGCTGTTATTACCCCATTCAAGTTGACAACT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTTTCTTATTGGAGACTaGAGTCTGCGTTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTFLIGD*SLRCLS
Trigger: ACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCATAACCAAACTATATaGCCCCGTTTCATAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFHNQTI*PRFIKV
Trigger: AACCTTTATGAAACGGGGCCATATAGTTTGGTTATG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCATAGTGAGTGACAGATaGCAATTACATGAGGATATT +
Preference number: 4 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFIVSDR*QLHEDI
Trigger: AATATCCTCATGTAATTGCCATCTGTCACTCACTAT...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAAGAAGTACATTTGGTaGAGTTTGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLKKYIW*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCCACCAAATGTACTTCTT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAATAAGAAGTACATTTaGTGGAGTTTGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNINKKYI*WSLRPA
Trigger: GGCTGGTCTCAAACTCCACCAAATGTACTTCTTATT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAATAAGAAGTACATTTaGTGGAGTTTGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTNKKYI*WSLRPA
Trigger: GGCTGGTCTCAAACTCCACCAAATGTACTTCTTATT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTTTTCCAGGTTTGGATaGCTCATCTGTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLFSRFG*LICVER
Trigger: TCTCTCTACACAGATGAGTCATCCAAACCTGGAAAA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTTTTCCAGGTTTGGATaGCTCATCTGTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTFSRFG*LICVER
Trigger: TCTCTCTACACAGATGAGTCATCCAAACCTGGAAAA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCATCTTTAGTAGCAGCTaGAAACCTGACACCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTIFSSS*KPDTRF
Trigger: AAAACGGGTGTCAGGTTTTCAGCTGCTACTAAAGAT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATACACTACACAGACTATaGACAGTTAGCAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNTLHRL*TVSRKR
Trigger: TCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAACACTACACAGACTATaGACAGTTAGCAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTTLHRL*TVSRKR
Trigger: TCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGTCTCGTTAGAAACCTaGATTGTTAATGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNVSLET*IVNGLK
Trigger: CTTAAGTCCATTAACAATTCAGGTTTCTAACGAGAC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAGTCTCGTTAGAAACCTaGATTGTTAATGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTVSLET*IVNGLK
Trigger: CTTAAGTCCATTAACAATTCAGGTTTCTAACGAGAC...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTTACATGAGGATATTTaGACGAAGGTACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVLHEDI*TKVHKP
Trigger: AGGCTTATGTACCTTCGTTCAAATATCCTCATGTAA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTTACATGAGGATATTTaGACGAAGGTACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNILHEDI*TKVHKP
Trigger: AGGCTTATGTACCTTCGTTCAAATATCCTCATGTAA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGTCAGTGAACGCTTATaGTCATTATCTTTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNVSERL*SLSLVA
Trigger: TGCTACTAAAGATAATGAGCATAAGCGTTCACTGAC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAGTCAGTGAACGCTTATaGTCATTATCTTTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTVSERL*SLSLVA
Trigger: TGCTACTAAAGATAATGAGCATAAGCGTTCACTGAC...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR GCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCGGGACGAGACAAACTTaGTTTAAGATCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTGTRQT*FKIKHW
Trigger: CCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCC...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAAAGCTTCTTAAAGTTTaGAGTAGTGATTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTKLLKV*SSDCSS
Trigger: AGAACTGCAATCACTACTCCAAACTTTAAGAAGCTT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTTAAGATCAAACACTaGTTTCTTATTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFFKIKH*FLIGDW
Trigger: CCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTTTAAGATCAAACACTaGTTTCTTATTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQFKIKH*FLIGDW
Trigger: CCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTCAGGTAAATGCTATTaGCTAGCAGAAGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTSGKCY*LAEDCS
Trigger: ACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCATAACCAAACTATATaGCCCCGTTTCATAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVHNQTI*PRFIKV
Trigger: AACCTTTATGAAACGGGGCCATATAGTTTGGTTATG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACATAACCAAACTATATaGCCCCGTTTCATAAAGGTT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTHNQTI*PRFIKV
Trigger: AACCTTTATGAAACGGGGCCATATAGTTTGGTTATG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTATAGACAGTTTAAATaGAGAATGCCGCGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTYRQFK*RMPRFH
Trigger: ATGGAAGCGCGGCATTCTTCATTTAAACTGTCTATA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTATATTCTATAGAGAGTaGAGAGGTGGCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLIFYRE*RGGLSI
Trigger: GATAGAAAGGCCACCTCTTCACTCTCTATAGAATAT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCAGATGGCAATTACATaGGGATATTTGAACGAAGGT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLQMAIT*GYLNEG
Trigger: ACCTTCGTTCAAATATCCTCATGTAATTGCCATCTG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTATTTTTATCTCTGAATaGTTCTGCTGTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLIFISE*FCCESG
Trigger: CCCTGACTCACAGCAGAATCATTCAGAGATAAAAAT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414849.6
ENST00000559596.6
ENST00000668273.1
CDS-3UTR TCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCATTTTTATCTCTGAATaGTTCTGTGAGTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTIFISE*FCESGS
Trigger: GGACCCTGACTCACAGAATCATTCAGAGATAAAAAT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560177.5
ENST00000560747.5
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATAAGCTTCTTAAAGTTTaGAGTAGTGATTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNKLLKV*SSDCSS
Trigger: AGAACTGCAATCACTACTCCAAACTTTAAGAAGCTT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAAGCTTCTTAAAGTTTaGAGTAGTGATTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTKLLKV*SSDCSS
Trigger: AGAACTGCAATCACTACTCCAAACTTTAAGAAGCTT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAAGCTTCTTAAAGTTTaGAGTAGTGATTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIKLLKV*SSDCSS
Trigger: AGAACTGCAATCACTACTCCAAACTTTAAGAAGCTT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAGTTGTCAACTTGAATaGGGTAATAACAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLSCQLE*GNNSSR
Trigger: TCTGCTGCTGTTATTACCCCATTCAAGTTGACAACT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATTTAAGATCAAACACTaGTTTCTTATTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTFKIKH*FLIGDW
Trigger: CCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGATAGTGAGTGACAGATaGCAATTACATGAGGATATT +
Preference number: 4 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVIVSDR*QLHEDI
Trigger: AATATCCTCATGTAATTGCCATCTGTCACTCACTAT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATATAGTGAGTGACAGATaGCAATTACATGAGGATATT +
Preference number: 4 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNIVSDR*QLHEDI
Trigger: AATATCCTCATGTAATTGCCATCTGTCACTCACTAT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTATAGTGAGTGACAGATaGCAATTACATGAGGATATT +
Preference number: 4 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIIVSDR*QLHEDI
Trigger: AATATCCTCATGTAATTGCCATCTGTCACTCACTAT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR TCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTTACATGAGGATATTTaGACGAAGGTACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLLHEDI*TKVHKP
Trigger: AGGCTTATGTACCTTCGTTCAAATATCCTCATGTAA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCATAACCAAACTATATaGCCCCGTTTCATAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLHNQTI*PRFIKV
Trigger: AACCTTTATGAAACGGGGCCATATAGTTTGGTTATG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTTTAAGATCAAACACTaGTTTCTTATTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: GNYMRIFERRYISLNNFTFKIKH*FLIGDW
Trigger: CCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CCA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTATAGTGAGTGACAGATaGCAATTACATGAGGATATT +
Preference number: 4 (lower is better)
Translates to: LSIPAYPILVIVQILLKLIVSDR*QLHEDI
Trigger: AATATCCTCATGTAATTGCCATCTGTCACTCACTAT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS GCA 90 bp CCAGCCGCCGGCCCGCAGCTGCCGTCTTGGCTGCAGCCTGAGAGGTaGGCTGTGTTCCAGTGCGCACAGTGTCACGCAGTGCTCGCCGAC +
Preference number: 5 (lower is better)
Translates to: PAAGPQLPSWLQPER*AVFQCAQCHAVLAD
Trigger: GTCGGCGAGCACTGCGTGACACTGTGCGCACTGGAACACAGCGCACCTCTCAGGCTGCAGCCAAGACGGCAGCTGCGGGCCGGCGGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS GCA 90 bp CTGTGTTCCAGTGCGCACAGTGTCACGCAGTGCTCGCCGACTCGGTaGACCTCGCCTGGGACCTGTCGCGGTCCCTCGGGGCCGTGGTCT +
Preference number: 5 (lower is better)
Translates to: LCSSAHSVTQCSPTR*TSPGTCRGPSGPWS
Trigger: AGACCACGGCCCCGAGGGACCGCGACAGGTCCCAGGCGAGGTGCACCGAGTCGGCGAGCACTGCGTGACACTGTGCGCACTGGAACACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 90 bp TGCGCACAGTGTCACGCAGTGCTCGCCGACTCGGTGCACCTCGCCTaGGACCTGTCGCGGTCCCTCGGGGCCGTGGTCTTCTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: CAQCHAVLADSVHLA*DLSRSLGAVVFSSE
Trigger: CTCACTGGAGAAGACCACGGCCCCGAGGGACCGCGACAGGTCCCAGGCGAGGTGCACCGAGTCGGCGAGCACTGCGTGACACTGTGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 90 bp GGGGCCTGGCGTGTATTCGAAAGGAAGGCGCCGGCTGCGGGAAGATaGCGGCTCAGCCGCTGCGGCATCGCTCACGTTGTGCAACGCCGC +
Preference number: 5 (lower is better)
Translates to: GAWRVFERKAPAAGR*RLSRCGIAHVVQRR
Trigger: GCGGCGTTGCACAACGTGAGCGATGCCGCAGCGGCTGAGCCGCCATCTTCCCGCAGCCGGCGCCTTCCTTTCGAATACACGCCAGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS GCA 90 bp AGCCTGAGAGGTGCGCTGTGTTCCAGTGCGCACAGTGTCACGCAGTaGTCGCCGACTCGGTGCACCTCGCCTGGGACCTGTCGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: SLRGALCSSAHSVTQ*SPTRCTSPGTCRGP
Trigger: GGGACCGCGACAGGTCCCAGGCGAGGTGCACCGAGTCGGCGAGCACTGCGTGACACTGTGCGCACTGGAACACAGCGCACCTCTCAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS GCA 90 bp CAGCTGCCGTCTTGGCTGCAGCCTGAGAGGTGCGCTGTGTTCCAGTaGGCACAGTGTCACGCAGTGCTCGCCGACTCGGTGCACCTCGCC +
Preference number: 5 (lower is better)
Translates to: QLPSWLQPERCAVFQ*AQCHAVLADSVHLA
Trigger: GGCGAGGTGCACCGAGTCGGCGAGCACTGCGTGACACTGTGCGCACTGGAACACAGCGCACCTCTCAGGCTGCAGCCAAGACGGCAGCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 90 bp ACTCGGTGCACCTCGCCTGGGACCTGTCGCGGTCCCTCGGGGCCGTaGTCTTCTCCAGTGAGTGCAGTGAAGCGTTCGGGAAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: TRCTSPGTCRGPSGP*SSPVSAVKRSGKAE
Trigger: CTCTGCCTTTCCCGAACGCTTCACTGCACTCACTGGAGAAGACCACGGCCCCGAGGGACCGCGACAGGTCCCAGGCGAGGTGCACCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CAA 90 bp GGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGGCACAGCCTCGCCTTTaGGGGTGCCCCCAGACACGG +
Preference number: 5 (lower is better)
Translates to: GAPRHGHMCRLSGWSLGQAQPRL*GCPQTR
Trigger: CCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGC...CTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp GGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: GAPRHGHMCRLSGWSLGQATRPA*RASLAD
Trigger: ATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGC...CTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS TCA 90 bp GAGATAGCAGAGCGCTTGAGTGACCCCTTCAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGACCGGCCTTGCGAGCGTCGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: EIAERLSDPFRPKVL*LAGPQDRPCERRWL
Trigger: CAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000560898.5
ENST00000668273.1
CDS GCA 90 bp GTTGCCCTCAGGTTGGCCCGGAGACCCAGACTCTTGGCTAAGTTCTaGAGGTCACTGTACTTGAGGGAGTCCAGCTCCTCTAGAGAGGGG +
Preference number: 5 (lower is better)
Translates to: VALRLARRPRLLAKF*RSLYLRESSSSREG
Trigger: CCCCTCTCTAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCCGGGCCAACCTGAGGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000558582.5
ENST00000559046.5
ENST00000559596.6
ENST00000559659.1
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGGAGATAGCAGAGCGCTaGAGTGACCCCTTCAGACCC +
Preference number: 5 (lower is better)
Translates to: GAPRHGHMCRLSGWSLGQEIAER*SDPFRP
Trigger: GGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTC...CTGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS GCA 90 bp TCATCCCTCAGGTTGGCCCGGAGACCCAGACTCTTGGCTAAGTTCTaGAGGTCACTGTACTTGAGGGAGTCCAGCTCCTCTAGAGAGGGG +
Preference number: 5 (lower is better)
Translates to: SSLRLARRPRLLAKF*RSLYLRESSSSREG
Trigger: CCCCTCTCTAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCCGGGCCAACCTGAGGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450592.6
CDS GCA 90 bp ATACGCAGGCGCCAAAGGGCCTGTAACGCCTGTTCAGGTAACGAGTaGGCGGACTCGGACTCCAGTGCTTGGATTGCCCATGATGTCCAA +
Preference number: 5 (lower is better)
Translates to: IRRRQRACNACSGNE*ADSDSSAWIAHDVQ
Trigger: TTGGACATCATGGGCAATCCAAGCACTGGAGTCCGAGTCCGCGCACTCGTTACCTGAACAGGCGTTACAGGCCCTTTGGCGCCTGCGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CAA 90 bp TTTGGGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGAGATAGCAGAGCGCTaGAGTGACCCCTTCAGACCC +
Preference number: 5 (lower is better)
Translates to: FGVPPDTVTCADFLAGVLEIAER*SDPFRP
Trigger: GGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTC...CAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp TGGCCAAGTGGCTGTCTCTCAGCTTCTTCCTGGTTGCTGATCTGTATCTCAGTCTTGGTTGCCCTCAGGTaGGCCCGGAGACCCAGACTC +
Preference number: 5 (lower is better)
Translates to: WPSGCLSASSWLLICISVLVALR*ARRPRL
Trigger: GAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCAA...GACTGAGATACAGATCAGCAACCAGGAAGAAGCTGAGAGACAGCCACTTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CAA 90 bp CCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGGCCTTGCGAGCGTCGTaGGCTGATGGGAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: PVMVFNLCVPSTASPFGVALRAS*ADGSRS
Trigger: GCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGC...CACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp GTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGCCCCCAAGGTACTCTGACTaGCAGGGCCACAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: VMVFNLCVPSTASPFGVPPRYSD*QGHKTG
Trigger: GCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGG...GGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp AGCTTTCCAGCAGCAGAATTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCGCACAGCCTCGCCTTTaGGGGTGCCCCCAGACACGG +
Preference number: 5 (lower is better)
Translates to: SFPAAEFPVMVFNLCVPSAQPRL*GCPQTR
Trigger: CCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGC...GCTTGGGACACACAAATTAAAGACCATCACGGGGAATTCTGCTGCTGGAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR CAA 90 bp TTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGCCAAGGTACTCTGACTaGCAGGGCCACAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: FPVMVFNLCVPSTASPFGPRYSD*QGHKTG
Trigger: GCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGG...CCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGCGGCATCGCTCACGTaGTGCAACGCCGCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFAASLT*CNAAPG
Trigger: CCCCGGGGCGGCGTTGCACAACGTGAGCGATGCCGC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS TCA 90 bp GAACCTGACACCCGTTTTAGCTGCAGAGATAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGTACTCTGACTTGCAGGGCCACAAGA +
Preference number: 5 (lower is better)
Translates to: EPDTRFSCRDSRALE*PLQTQGTLTCRATR
Trigger: TCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTCAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGCACAGCCTCGCCTTTaGGGGTGCCCCCAGACACGG +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFAQPRL*GCPQTR
Trigger: CCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGGTGCCCCCAGACACGGTCACATGTGCAGACTTTCTGGCTGGAGTCTTGGTCAGTGATGGTCTTTAATTaGTGTGTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: GCPQTRSHVQTFWLESWSVMVFN*CVPSTA
Trigger: GGCTGTGCTTGGGACACACAAATTAAAGACCATCAC...TGACCAAGACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCACGCAGGAGCTGTGCTaGGGGCGGGGCCTGGCGTGT +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFTQELC*GRGLAC
Trigger: ACACGCCAGGCCCCGCCCCAAGCACAGCTCCTGCGT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS TCA 90 bp AAACCTGACACCCGTTTTAGCTGCAGAGATAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGTACTCTGACTTGCAGGGCCACAAGA +
Preference number: 5 (lower is better)
Translates to: KPDTRFSCRDSRALE*PLQTQGTLTCRATR
Trigger: TCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTCAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GAGTCAGGGTCCACACGGACAGTCTTGCACCTTCTCCTTGTTTTGGTGACATGGCACCTTCTCCTTGTTTaGGTGACATGGCCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: ESGSTRTVLHLLLVLVTWHLLLV*VTWPSG
Trigger: GCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTG...CCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGGCACAGCCTCGCCTTTaGGGGTGCCCCCAGACACGG +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQAQPRL*GCPQTR
Trigger: CCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGC...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGCTGACCCCTCCCTTATaGATGGGCTGCTTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: PVMVFNLCVPSTASPFGVLTPPL*MGCFSS
Trigger: TGAACTGAAGCAGCCCATCAATAAGGGAGGGGTCAG...CACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS CCA 90 bp GCTGATGGGAGTAGAAGCCACAGAGAGTCTTCCTCTTGGAGGTACTaGAGTCCTGACCCCTCCCTTATTGATGGGCTGCTTCAGTTCATT +
Preference number: 5 (lower is better)
Translates to: ADGSRSHRESSSWRY*SPDPSLIDGLLQFI
Trigger: AATGAACTGAAGCAGCCCATCAATAAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGAAGACTCTCTGTGGCTTCTACTCCCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414849.6
ENST00000450592.6
ENST00000560747.5
ENST00000560898.5
CDS-3UTR CAA 90 bp ACAGTCTTGCACCTTCTCCTTGTTTTGGTGACATGGCCAAGTGGCTGTCTCTCATGCAGGTCACTGTACTaGAGGGAGTCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TVLHLLLVLVTWPSGCLSCRSLY*RESSSS
Trigger: AGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCA...TGAGAGACAGCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CAA 90 bp GAGTCAGGGTCCACACGGACAGTCTTGCACCTTCTCCTTGTTTTGGTGACATGGTCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ESGSTRTVLHLLLVLVTWSTRTV*HLLLVL
Trigger: CAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGA...CCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFATRPA*RASLAD
Trigger: ATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTGGGGTGTTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGC +
Preference number: 5 (lower is better)
Translates to: PVMVFNLCVPSTASPFGVFLAGV*VSERLC
Trigger: GCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA...CACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGCACAGCCTCGCCTTTaGGGGTGCCCCCAGACACGG +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNAQPRL*GCPQTR
Trigger: CCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAGCACAGCCTCGCCTTTaGGGGTGCCCCCAGACACGG +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTAQPRL*GCPQTR
Trigger: CCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGC...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp AGGAACTTTTGCAGTAGCTCTGAGATCCTGGCTTTCCTGCTTTTCATGATTCTGGCCGAGATCGTGTCATaGCACTCCAGCCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RNFCSSSEILAFLLFMILAEIVS*HSSLGS
Trigger: GCTGCCCAGGCTGGAGTGCAATGACACGATCTCGGC...CAGAATCATGAAAAGCAGGAAAGCCAGGATCTCAGAGCTACTGCAAAAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGGTTGCCCTCAGGTaGGCCCGGAGACCCAGACTC +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFLVALR*ARRPRL
Trigger: GAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCAA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTAGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: DFLAGVLVSERLCSLSLVATRPA*RASLAD
Trigger: ATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGC...TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQATRPA*RASLAD
Trigger: ATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGC...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTATRPA*RASLAD
Trigger: ATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS GCA 90 bp CACAGCAAGACTCTGTCTGAGGAAACAGCATTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGAACTTTTGCAGTAGCTCTGAGATCC +
Preference number: 5 (lower is better)
Translates to: HSKTLSEETAFSASW*SSGGEGTFAVALRS
Trigger: GGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGACAGAGTCTTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558582.5
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTTGGTTGCCCTCAGGTaGGCCCGGAGACCCAGACTC +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNILVALR*ARRPRL
Trigger: GAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCAA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTTGGTTGCCCTCAGGTaGGCCCGGAGACCCAGACTC +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLVALR*ARRPRL
Trigger: GAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCAA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CATGATTCTGTGAGTCAGGGTCCACACGGACAGTCTTGCACCTTCTCCTTGTTTAAGGCTTTTAACAACTaGGTTGCCCTCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HDSVSQGPHGQSCTFSLFKAFNN*VALRLA
Trigger: GGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCTT...AAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTCACAGAATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559046.5
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGCCTTGCGAGCGTCGTaGGCTGATGGGAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTALRAS*ADGSRS
Trigger: GCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTAGCCTTGCGAGCGTCGTaGGCTGATGGGAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: DFLAGVLVSERLCSLSLVALRAS*ADGSRS
Trigger: GCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGC...TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNATRPA*RASLAD
Trigger: ATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTATRPA*RASLAD
Trigger: ATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGC...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCCAAGGTACTCTGACTaGCAGGGCCACAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQPRYSD*QGHKTG
Trigger: GCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTGCACAGCCTCGCCTTTaGGGGTGCCCCCAGACACGG +
Preference number: 5 (lower is better)
Translates to: LSIPAYPILVIVQILLKLAQPRL*GCPQTR
Trigger: CCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGC...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCGCACAGCCTCGCCTTTaGGGGTGCCCCCAGACACGG +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTAQPRL*GCPQTR
Trigger: CCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGC...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS CCA 90 bp CAACACAGCAAGACTCTGTCTGAGGAAACAGCATTCTCAGCTTCTTaGTGCTCGTCTGGTGGAGAAGGAACTTTTGCAGTAGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: QHSKTLSEETAFSAS*CSSGGEGTFAVALR
Trigger: TCTCAGAGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGACAGAGTCTTGCTGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558582.5
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGCCTTGCGAGCGTCGTaGGCTGATGGGAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNALRAS*ADGSRS
Trigger: GCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGCCTTGCGAGCGTCGTaGGCTGATGGGAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVALRAS*ADGSRS
Trigger: GCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCCAAGGTACTCTGACTaGCAGGGCCACAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNPRYSD*QGHKTG
Trigger: GCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCCAAGGTACTCTGACTaGCAGGGCCACAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVPRYSD*QGHKTG
Trigger: GCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGGAGATAGCAGAGCGCTaGAGTGACCCCTTCAGACCC +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQEIAER*SDPFRP
Trigger: GGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTC...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS GCA 90 bp AGCATTCTCAGCTTCTTGGTGCTCGTCTGGTGGAGAAGGAACTTTTaGAGTAGCTCTGAGATCCTGGCTTTCCTGCTTTTCATGATTCTG +
Preference number: 5 (lower is better)
Translates to: SILSFLVLVWWRRNF*SSSEILAFLLFMIL
Trigger: CAGAATCATGAAAAGCAGGAAAGCCAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000558582.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACCGCGCTTCCATTGGTaGAAAATGCCTCAAAGGCGG +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTPRFHW*KMPQRR
Trigger: CCGCCTTTGAGGCATTTTCAACCAATGGAAGCGCGG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTGCAGGTCACTGTACTaGAGGGAGTCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQCRSLY*RESSSS
Trigger: AGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTGCAGGTCACTGTACTaGAGGGAGTCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFCRSLY*RESSSS
Trigger: AGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATGCAGGTCACTGTACTaGAGGGAGTCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTCRSLY*RESSSS
Trigger: AGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTTGGTTGCCCTCAGGTaGGCCCGGAGACCCAGACTC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTLVALR*ARRPRL
Trigger: GAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCAA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACTGACCCCTCCCTTATaGATGGGCTGCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTLTPPL*MGCCFS
Trigger: ACTGAAGCAGCAGCCCATCAATAAGGGAGGGGTCAG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260359.10
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LSIPAYPILVIVQILLKLATRPA*RASLAD
Trigger: ATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGC...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTGAGATAGCAGAGCGCTaGAGTGACCCCTTCAGACCC +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIEIAER*SDPFRP
Trigger: GGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTC...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGAGATAGCAGAGCGCTaGAGTGACCCCTTCAGACCC +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVEIAER*SDPFRP
Trigger: GGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTC...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCTCGCGTTTCTTCCGTaGCTCTTCCTTTGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFLAFLP*LFLCLE
Trigger: CTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS GCA 90 bp TTTGAATCTCTGTTACCTGAGGAAACAGCATTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGAACTTTTGCAGTAGCTCTGAGATCC +
Preference number: 5 (lower is better)
Translates to: FESLLPEETAFSASW*SSGGEGTFAVALRS
Trigger: GGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGGTAACAGAGATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS CCA 90 bp ACCTTTGAATCTCTGTTACCTGAGGAAACAGCATTCTCAGCTTCTTaGTGCTCGTCTGGTGGAGAAGGAACTTTTGCAGTAGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: TFESLLPEETAFSAS*CSSGGEGTFAVALR
Trigger: TCTCAGAGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGGTAACAGAGATTCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTGCAGGTCACTGTACTaGAGGGAGTCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVCRSLY*RESSSS
Trigger: AGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTGCAGGTCACTGTACTaGAGGGAGTCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNICRSLY*RESSSS
Trigger: AGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACACCTTCTCCTTGTTTaGGTGACATGGCCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTHLLLV*VTWPSG
Trigger: GCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCACCTTCTCCTTGTTTaGGTGACATGGCCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFHLLLV*VTWPSG
Trigger: GCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFSTRTV*HLLLVL
Trigger: CAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGAGCATTCTCAGCTTCTaGGTGCTCGTCTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQSILSF*VLVWWR
Trigger: TCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCT...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCTGACCCCTCCCTTATaGATGGGCTGCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVLTPPL*MGCCFS
Trigger: ACTGAAGCAGCAGCCCATCAATAAGGGAGGGGTCAG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260359.10
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACTGACCCCTCCCTTATaGATGGGCTGCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTLTPPL*MGCCFS
Trigger: ACTGAAGCAGCAGCCCATCAATAAGGGAGGGGTCAG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260359.10
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCGCCTTGCGAGCGTCGTaGGCTGATGGGAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTALRAS*ADGSRS
Trigger: GCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGC...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCCAAGGTACTCTGACTaGCAGGGCCACAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: LSIPAYPILVIVQILLKLPRYSD*QGHKTG
Trigger: GCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCTCCGTTGCTCTTCCTTaGTCTGGAGATGGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFSVALP*SGDGVV
Trigger: AACAACCCCATCTCCAGACAAAGGAAGAGCAACGGA...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCTCGCGTTTCTTCCGTaGCTCTTCCTTTGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQLAFLP*LFLCLE
Trigger: CTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCTTCTCCTTTCGTTCTaGCTCGCGTTTCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFLLLSF*LAFLPL
Trigger: CAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACTGACCCCTCCCTTATaGATGGGCTGCTTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTLTPPL*MGCFSS
Trigger: TGAACTGAAGCAGCCCATCAATAAGGGAGGGGTCAG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414849.6
ENST00000560747.5
CDS-3UTR CAA 90 bp GAATTCCCCGTGATGGTCTTTAATTTGTGTGTCCCAAGCACAGCCTCGCCTTTTAGGCAGAAGAATCACTaGAACCTGACACCCGTTTTA +
Preference number: 5 (lower is better)
Translates to: EFPVMVFNLCVPSTASPFRQKNH*NLTPVL
Trigger: TAAAACGGGTGTCAGGTTCAAGTGATTCTTCTGCCT...AAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCACGGGGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAAAGGCTTTTAACAACTaGGTTGCCCTCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTKAFNN*VALRLA
Trigger: GGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCTT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCACCTTCTCCTTGTTTaGGTGACATGGCCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNHLLLV*VTWPSG
Trigger: GCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCACCTTCTCCTTGTTTaGGTGACATGGCCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVHLLLV*VTWPSG
Trigger: GCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFSTRTV*HLLLVL
Trigger: CAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTSTRTV*HLLLVL
Trigger: CAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQSTRTV*HLLLVL
Trigger: CAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAGCATTCTCAGCTTCTaGGTGCTCGTCTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNISILSF*VLVWWR
Trigger: TCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAGCATTCTCAGCTTCTaGGTGCTCGTCTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTSILSF*VLVWWR
Trigger: TCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATAGCATTCTCAGCTTCTaGGTGCTCGTCTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNSILSF*VLVWWR
Trigger: TCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCGAGATAGCAGAGCGCTaGAGTGACCCCTTCAGACCC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTEIAER*SDPFRP
Trigger: GGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTC...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GACTTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTATTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGC +
Preference number: 5 (lower is better)
Translates to: DFLAGVLVSERLCSLSLVFLAGV*VSERLC
Trigger: GCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA...TACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGC +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFFLAGV*VSERLC
Trigger: GCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGTGATGGTCTTTAATTaGTGTGTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFVMVFN*CVPSTA
Trigger: GGCTGTGCTTGGGACACACAAATTAAAGACCATCAC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACATCCGTTGCTCTTCCTTaGTCTGGAGATGGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTSVALP*SGDGVV
Trigger: AACAACCCCATCTCCAGACAAAGGAAGAGCAACGGA...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTCTCGCGTTTCTTCCGTaGCTCTTCCTTTGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNILAFLP*LFLCLE
Trigger: CTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAG...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACTCGCGTTTCTTCCGTaGCTCTTCCTTTGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTLAFLP*LFLCLE
Trigger: CTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCTCGCGTTTCTTCCGTaGCTCTTCCTTTGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLAFLP*LFLCLE
Trigger: CTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCTTCTCCTTTCGTTCTaGCTCGCGTTTCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFLLLSF*LAFLPL
Trigger: CAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCTTCTCCTTTCGTTCTaGCTCGCGTTTCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQLLLSF*LAFLPL
Trigger: CAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACTTCTCCTTTCGTTCTaGCTCGCGTTTCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTLLLSF*LAFLPL
Trigger: CAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCTGACCCCTCCCTTATaGATGGGCTGCTTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLTPPL*MGCFSS
Trigger: TGAACTGAAGCAGCCCATCAATAAGGGAGGGGTCAG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414849.6
ENST00000560747.5
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGCACTGAGAGGGCGATaGACCAAGCTTCTTTTACGA +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTALRGR*TKLLLR
Trigger: TCGTAAAAGAAGCTTGGTCAATCGCCCTCTCAGTGC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCCGCGCTTCCATTGGTaGAAAATGCCTCAAAGGCGG +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTPRFHW*KMPQRR
Trigger: CCGCCTTTGAGGCATTTTCAACCAATGGAAGCGCGG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCAATGCCGCGCTTCCATaGGTTGAAAATGCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFNAALP*VENASK
Trigger: CTTTGAGGCATTTTCAACCAATGGAAGCGCGGCATT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTGCAGGTCACTGTACTaGAGGGAGTCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LSIPAYPILVIVQILLKLCRSLY*RESSSS
Trigger: AGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATAAGGCTTTTAACAACTaGGTTGCCCTCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNKAFNN*VALRLA
Trigger: GGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCTT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAAGGCTTTTAACAACTaGGTTGCCCTCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIKAFNN*VALRLA
Trigger: GGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCTT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGTCAGCTTCTTCCTGGTaGCTGATCTGTATCTCAGTC +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQSASSW*LICISV
Trigger: GACTGAGATACAGATCAGCAACCAGGAAGAAGCTGA...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNISTRTV*HLLLVL
Trigger: CAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCCTTCTGAAGGTACCTTaGAATCTCTGTTACCTGAGG +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFLLKVP*NLCYLR
Trigger: CCTCAGGTAACAGAGATTCAAAGGTACCTTCAGAAG...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCTGACCCCTCCCTTATaGATGGGCTGCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTLTPPL*MGCCFS
Trigger: ACTGAAGCAGCAGCCCATCAATAAGGGAGGGGTCAG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260359.10
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGC +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNFLAGV*VSERLC
Trigger: GCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGC +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIFLAGV*VSERLC
Trigger: GCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGC +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTFLAGV*VSERLC
Trigger: GCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGTGATGGTCTTTAATTaGTGTGTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTVMVFN*CVPSTA
Trigger: GGCTGTGCTTGGGACACACAAATTAAAGACCATCAC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp TTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTAGCAGTGATGGTCTTTAATTaGTGTGTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: FLAGVLVSERLCSLSLVAVMVFN*CVPSTA
Trigger: GGCTGTGCTTGGGACACACAAATTAAAGACCATCAC...TGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557840.5
ENST00000560898.5
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGTGATGGTCTTTAATTaGTGTGTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFVMVFN*CVPSTA
Trigger: GGCTGTGCTTGGGACACACAAATTAAAGACCATCAC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCGCCTCAGTTGTCAACTaGAATGGGGTAATAACAGCA +
Preference number: 5 (lower is better)
Translates to: ESEEVAFLSQLTLFLLLFASVVN*NGVITA
Trigger: TGCTGTTATTACCCCATTCAAGTTGACAACTGAGGC...GAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTTCCGTTGCTCTTCCTTaGTCTGGAGATGGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNISVALP*SGDGVV
Trigger: AACAACCCCATCTCCAGACAAAGGAAGAGCAACGGA...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACTTCTCCTTTCGTTCTaGCTCGCGTTTCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTLLLSF*LAFLPL
Trigger: CAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGCTTCTCCTTTCGTTCTaGCTCGCGTTTCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVLLLSF*LAFLPL
Trigger: CAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAG...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS GCA 90 bp CTTGCTTTAAGATCAAACACTGGTTTCTTATTGGAGACTGGAGTCTaGGTTGCCTCAGTTGTCAACTTGAATGGGGTAATAACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LALRSNTGFLLETGV*VASVVNLNGVITAA
Trigger: TGCTGCTGTTATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS CCA 90 bp TTCATAGTTGAGGGGACGAGACAAACTTGCTTTAAGATCAAACACTaGTTTCTTATTGGAGACTGGAGTCTGCGTTGCCTCAGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: FIVEGTRQTCFKIKH*FLIGDWSLRCLSCQ
Trigger: TTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCCCTCAACTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGTCAGCTTCTTCCTGGTaGCTGATCTGTATCTCAGTC +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVSASSW*LICISV
Trigger: GACTGAGATACAGATCAGCAACCAGGAAGAAGCTGA...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACATCAGCTTCTTCCTGGTaGCTGATCTGTATCTCAGTC +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTSASSW*LICISV
Trigger: GACTGAGATACAGATCAGCAACCAGGAAGAAGCTGA...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCACCTTCTCCTTGTTTaGGTGACATGGCCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTHLLLV*VTWPSG
Trigger: GCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTCACCTTCTCCTTGTTTaGGTGACATGGCCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: LSIPAYPILVIVQILLKLHLLLV*VTWPSG
Trigger: GCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTG...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACACTTCTGAAGGTACCTTaGAATCTCTGTTACCTGAGG +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTLLKVP*NLCYLR
Trigger: CCTCAGGTAACAGAGATTCAAAGGTACCTTCAGAAG...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCCTTCTGAAGGTACCTTaGAATCTCTGTTACCTGAGG +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFLLKVP*NLCYLR
Trigger: CCTCAGGTAACAGAGATTCAAAGGTACCTTCAGAAG...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp TTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTAGCACTTCTGAAGGTACCTTaGAATCTCTGTTACCTGAGG +
Preference number: 5 (lower is better)
Translates to: FLAGVLVSERLCSLSLVALLKVP*NLCYLR
Trigger: CCTCAGGTAACAGAGATTCAAAGGTACCTTCAGAAG...TGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560898.5
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGTGATGGTCTTTAATTaGTGTGTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNVMVFN*CVPSTA
Trigger: GGCTGTGCTTGGGACACACAAATTAAAGACCATCAC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCGCCTCAGTTGTCAACTaGAATGGGGTAATAACAGCA +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFASVVN*NGVITA
Trigger: TGCTGTTATTACCCCATTCAAGTTGACAACTGAGGC...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp TTTCTGGCTGGAGTCTTGGTCAGTGAACGCTTATGCTCATTATCTTTAGTAGCAGCCTCAGTTGTCAACTaGAATGGGGTAATAACAGCA +
Preference number: 5 (lower is better)
Translates to: FLAGVLVSERLCSLSLVAASVVN*NGVITA
Trigger: TGCTGTTATTACCCCATTCAAGTTGACAACTGAGGC...TGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557840.5
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGGCCTCAGTTGTCAACTaGAATGGGGTAATAACAGCA +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQASVVN*NGVITA
Trigger: TGCTGTTATTACCCCATTCAAGTTGACAACTGAGGC...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCAACACTGGTTTCTTATaGGAGACTGGAGTCTGCGTT +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFNTGFL*ETGVCV
Trigger: AACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAAACACTGGTTTCTTATaGGAGACTGGAGTCTGCGTT +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTNTGFL*ETGVCV
Trigger: AACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCAAGGCTTTTAACAACTaGGTTGCCCTCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTKAFNN*VALRLA
Trigger: GGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCTT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTATATTCTATAGAGAGTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCAGAGGATGCAGAAGTTaGACTTTCATCCTGATTCTC +
Preference number: 5 (lower is better)
Translates to: LYSIESEEVAFLSQLTLFRGCRS*TFILIL
Trigger: GAGAATCAGGATGAAAGTCAAACTTCTGCATCCTCT...GAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAAGAGGATGCAGAAGTTaGACTTTCATCCTGATTCTC +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTRGCRS*TFILIL
Trigger: GAGAATCAGGATGAAAGTCAAACTTCTGCATCCTCT...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTSTRTV*HLLLVL
Trigger: CAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATCTTCTGAAGGTACCTTaGAATCTCTGTTACCTGAGG +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNLLKVP*NLCYLR
Trigger: CCTCAGGTAACAGAGATTCAAAGGTACCTTCAGAAG...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTTTTCTGGCTGGAGTCTaGGTCAGTGAACGCTTATGC +
Preference number: 5 (lower is better)
Translates to: LSIPAYPILVIVQILLKLFLAGV*VSERLC
Trigger: GCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAA...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATGCCTCAGTTGTCAACTaGAATGGGGTAATAACAGCA +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNASVVN*NGVITA
Trigger: TGCTGTTATTACCCCATTCAAGTTGACAACTGAGGC...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGAACACTGGTTTCTTATaGGAGACTGGAGTCTGCGTT +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVNTGFL*ETGVCV
Trigger: AACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTAACACTGGTTTCTTATaGGAGACTGGAGTCTGCGTT +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNINTGFL*ETGVCV
Trigger: AACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTT...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACAAACACTGGTTTCTTATaGGAGACTGGAGTCTGCGTT +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTNTGFL*ETGVCV
Trigger: AACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTT...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTCCGTTGCTCTTCCTTaGTCTGGAGATGGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTSVALP*SGDGVV
Trigger: AACAACCCCATCTCCAGACAAAGGAAGAGCAACGGA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCACTCCAGTGCTTGGATaGCCCATGATGTCCAATGAG +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTTPVLG*PMMSNE
Trigger: CTCATTGGACATCATGGGCAATCCAAGCACTGGAGT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS GCA 90 bp TTTAAGATCAAACACTGGTTTCTTATTGGAGACTGGAGTCTGCGTTaGCTCAGTTGTCAACTTGAATGGGGTAATAACAGCAGCAGAATT +
Preference number: 5 (lower is better)
Translates to: FKIKHWFLIGDWSLR*LSCQLEWGNNSSRI
Trigger: AATTCTGCTGCTGTTATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS CCA 90 bp AGACAAACTTGCTTTAAGATCAAACACTGGTTTCTTATTGGAGACTaGAGTCTGCGTTGCCTCAGTTGTCAACTTGAATGGGGTAATAAC +
Preference number: 5 (lower is better)
Translates to: RQTCFKIKHWFLIGD*SLRCLSCQLEWGNN
Trigger: GTTATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCAAGTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCAATGCCGCGCTTCCATaGGTTGAAAATGCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTNAALP*VENASK
Trigger: CTTTGAGGCATTTTCAACCAATGGAAGCGCGGCATT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR CAA 90 bp ATCTTGAGCAGTATAAAACTCAGAAGCTCCACTGAGGTGAAGGAAACATGGACAGCGCCACTCTTAACTTaGACTAGGCAGAAATTTATA +
Preference number: 5 (lower is better)
Translates to: ILSSIKLRSSTEVKETWTAPLLT*TRQKFI
Trigger: TATAAATTTCTGCCTAGTCAAAGTTAAGAGTGGCGC...TGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260359.10
ENST00000668273.1
CDS-3UTR CAA 90 bp GTGAAGAGGTGGCCTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATAGAGGATGCAGAAGTTaGACTTTCATCCTGATTCTC +
Preference number: 5 (lower is better)
Translates to: VKRWPFYPSLPYSCYCSNRGCRS*TFILIL
Trigger: GAGAATCAGGATGAAAGTCAAACTTCTGCATCCTCT...ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCTCAGCTTCTTCCTGGTaGCTGATCTGTATCTCAGTC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTSASSW*LICISV
Trigger: GACTGAGATACAGATCAGCAACCAGGAAGAAGCTGA...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTGTGATGGTCTTTAATTaGTGTGTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LSIPAYPILVIVQILLKLVMVFN*CVPSTA
Trigger: GGCTGTGCTTGGGACACACAAATTAAAGACCATCAC...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCGTGATGGTCTTTAATTaGTGTGTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTVMVFN*CVPSTA
Trigger: GGCTGTGCTTGGGACACACAAATTAAAGACCATCAC...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCAACACTGGTTTCTTATaGGAGACTGGAGTCTGCGTT +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTNTGFL*ETGVCV
Trigger: AACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGACACTACACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGACCATCCCAAAGAATTaGAGCTTTAAGGTGATAACG +
Preference number: 5 (lower is better)
Translates to: GHYTDYEQLAEKDLVTKVTIPKN*SFKVIT
Trigger: CGTTATCACCTTAAAGCTCAAATTCTTTGGGATGGT...CACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GATAACGTCTTTTCAGAGATCATAGCACATGAAGAACCCATGGACACTACACAGCAGCTTACCCTATTCTaGTTATTGTTCAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: DNVFSEIIAHEEPMDTTQQLTLF*LLFKFS
Trigger: GGAGAATTTGAACAATAACAAGAATAGGGTAAGCTG...CTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTTTCTATCCCAGCTTACCCTATTCTTGTTATTGTTCAAATTCTCCTGAAGCTTAGAGGATGCAGAAGTTaGACTTTCATCCTGATTCTC +
Preference number: 5 (lower is better)
Translates to: LSIPAYPILVIVQILLKLRGCRS*TFILIL
Trigger: GAGAATCAGGATGAAAGTCAAACTTCTGCATCCTCT...AAGCTTCAGGAGAATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCAGAGGATGCAGAAGTTaGACTTTCATCCTGATTCTC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTRGCRS*TFILIL
Trigger: GAGAATCAGGATGAAAGTCAAACTTCTGCATCCTCT...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp ACAGACTATGAACAGTTAGCAGAAAAAGATCTCGTGACTAAAGTGGGGATGACACAGCTTACCCTATTCTaGTTATTGTTCAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: TDYEQLAEKDLVTKVGMTQLTLF*LLFKFS
Trigger: GGAGAATTTGAACAATAACAAGAATAGGGTAAGCTG...TGTCATCCCCACTTTAGTCACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp CTGCCATCAGGTAAATGCTATTGGCTAGCAGAAGACTGCAGTTCTGTTAATATTCAGCTTACCCTATTCTaGTTATTGTTCAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: LPSGKCYWLAEDCSSVNIQLTLF*LLFKFS
Trigger: GGAGAATTTGAACAATAACAAGAATAGGGTAAGCTG...AATATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS-3UTR CAA 90 bp GGCAATTACATGAGGATATTTGAACGAAGGTACATAAGCCTAAACAATTTCACCCAGCTTACCCTATTCTaGTTATTGTTCAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: GNYMRIFERRYISLNNFTQLTLF*LLFKFS
Trigger: GGAGAATTTGAACAATAACAAGAATAGGGTAAGCTG...GGTGAAATTGTTTAGGCTTATGTACCTTCGTTCAAATATCCTCATGTAATTGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS GCA 72 bp AGTGCGCACAGTGTCACGCAGTGCTCGCCGACTCGGTaGACCTCGCCTGGGACCTGTCGCGGTCCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SAHSVTQCSPTR*TSPGTCRGPSG
Trigger: CCCCGAGGGACCGCGACAGGTCCCAGGCGAGGTGCACCGAGTCGGCGAGCACTGCGTGACACTGTGCGCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS GCA 72 bp CGGGGCCTGGCGTGTATTCGAAAGGAAGGCGCCGGCTaGGGGAAGATGGCGGCTCAGCCGCTGCGGCATCGC +
Preference number: 6 (lower is better)
Translates to: RGLACIRKEGAG*GKMAAQPLRHR
Trigger: GCGATGCCGCAGCGGCTGAGCCGCCATCTTCCCGCAGCCGGCGCCTTCCTTTCGAATACACGCCAGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 72 bp CTAGCCCGAGAGGGTGTTCCCGCTTTCTCCACCGGGTaGCGGAGAACCACCTCCCAGGCAGGGTCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: LAREGVPAFSTG*RRTTSQAGSRP
Trigger: CGGCCGCGACCCTGCCTGGGAGGTGGTTCTCCGCCACCCGGTGGAGAAAGCGGGAACACCCTCTCGGGCTAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 72 bp TGTCACGCAGTGCTCGCCGACTCGGTGCACCTCGCCTaGGACCTGTCGCGGTCCCTCGGGGCCGTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: CHAVLADSVHLA*DLSRSLGAVVF
Trigger: GAAGACCACGGCCCCGAGGGACCGCGACAGGTCCCAGGCGAGGTGCACCGAGTCGGCGAGCACTGCGTGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS TCA 72 bp AGCCGCCGGCCCGCAGCTGCCGTCTTGGCTGCAGCCTaGGAGGTGCGCTGTGTTCCAGTGCGCACAGTGTCA +
Preference number: 6 (lower is better)
Translates to: SRRPAAAVLAAA*EVRCVPVRTVS
Trigger: TGACACTGTGCGCACTGGAACACAGCGCACCTCTCAGGCTGCAGCCAAGACGGCAGCTGCGGGCCGGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS GCA 72 bp GGTGCGCTGTGTTCCAGTGCGCACAGTGTCACGCAGTaGTCGCCGACTCGGTGCACCTCGCCTGGGACCTGT +
Preference number: 6 (lower is better)
Translates to: GALCSSAHSVTQ*SPTRCTSPGTC
Trigger: ACAGGTCCCAGGCGAGGTGCACCGAGTCGGCGAGCACTGCGTGACACTGTGCGCACTGGAACACAGCGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 72 bp ACCTCGCCTGGGACCTGTCGCGGTCCCTCGGGGCCGTaGTCTTCTCCAGTGAGTGCAGTGAAGCGTTCGGGA +
Preference number: 6 (lower is better)
Translates to: TSPGTCRGPSGP*SSPVSAVKRSG
Trigger: TCCCGAACGCTTCACTGCACTCACTGGAGAAGACCACGGCCCCGAGGGACCGCGACAGGTCCCAGGCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 72 bp GCGGCAGGGCAGAGGCGTTCCCCACATCTCAGACCATaGGAGGCCGGGCAGAGACGCTCCTCACTTCCTAGA +
Preference number: 6 (lower is better)
Translates to: AAGQRRSPHLRP*EAGQRRSSLPR
Trigger: TCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCTCCCATGGTCTGAGATGTGGGGAACGCCTCTGCCCTGCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 72 bp CGTGTATTCGAAAGGAAGGCGCCGGCTGCGGGAAGATaGCGGCTCAGCCGCTGCGGCATCGCTCACGTTGTG +
Preference number: 6 (lower is better)
Translates to: RVFERKAPAAGR*RLSRCGIAHVV
Trigger: CACAACGTGAGCGATGCCGCAGCGGCTGAGCCGCCATCTTCCCGCAGCCGGCGCCTTCCTTTCGAATACACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS GCA 72 bp TCTTGGCTGCAGCCTGAGAGGTGCGCTGTGTTCCAGTaGGCACAGTGTCACGCAGTGCTCGCCGACTCGGTG +
Preference number: 6 (lower is better)
Translates to: SWLQPERCAVFQ*AQCHAVLADSV
Trigger: CACCGAGTCGGCGAGCACTGCGTGACACTGTGCGCACTGGAACACAGCGCACCTCTCAGGCTGCAGCCAAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS TCA 72 bp GAGCGCTTGAGTGACCCCTTCAGACCCAAGGTACTCTaGCTTGCAGGGCCACAAGACCGGCCTTGCGAGCGT +
Preference number: 6 (lower is better)
Translates to: ERLSDPFRPKVL*LAGPQDRPCER
Trigger: ACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAGGGGTCACTCAAGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000560898.5
ENST00000668273.1
CDS TCA 72 bp GTGCGCGGACTCGGACTCCAGTGCTTGGATTGCCCATaGTGTCCAATGAGGACGCAGGAGCTGTGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: VRGLGLQCLDCP*CPMRTQELCLG
Trigger: CCCCAAGCACAGCTCCTGCGTCCTCATTGGACATCATGGGCAATCCAAGCACTGGAGTCCGAGTCCGCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS GCA 72 bp CGCCAAAGGGCCTGTAACGCCTGTTCAGGTAACGAGTaGGCGGACTCGGACTCCAGTGCTTGGATTGCCCAT +
Preference number: 6 (lower is better)
Translates to: RQRACNACSGNE*ADSDSSAWIAH
Trigger: ATGGGCAATCCAAGCACTGGAGTCCGAGTCCGCGCACTCGTTACCTGAACAGGCGTTACAGGCCCTTTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CCA 72 bp CTTGCAGGGCCACAAGACCGGCCTTGCGAGCGTCGTTaGCTGATGGGAGTAGAAGCCACAGAGAGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LAGPQDRPCERR*LMGVEATESLP
Trigger: AGGAAGACTCTCTGTGGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000560898.5
ENST00000668273.1
CDS CAA 72 bp ACTTGCAGGGCCACAAGACCGGCCTTGCGAGCGTCGTaGGCTGATGGGAGTAGAAGCCACAGAGAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: TCRATRPALRAS*ADGSRSHRESS
Trigger: GGAAGACTCTCTGTGGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000560898.5
ENST00000668273.1
CDS CAA 72 bp CAAGGTACTCTGACTTGCAGGGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGATGGGAGTAGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: QGTLTCRATRPA*RASLADGSRSH
Trigger: GTGGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000560898.5
ENST00000668273.1
CDS CAA 90 bp GGTACTCTGACTTGCAGGGCCACAAGACCGGCCTTGCGAGCGTCGTaGGCTGATGGGAGTAGAAGCCACAGAGAGTCTTCCTCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: GTLTCRATRPALRAS*ADGSRSHRESSSWR
Trigger: CCTCCAAGAGGAAGACTCTCTGTGGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000560898.5
ENST00000668273.1
CDS CAA 90 bp CTTCAGACCCAAGGTACTCTGACTTGCAGGGCCACAAGACCGGCCTaGCGAGCGTCGTTGGCTGATGGGAGTAGAAGCCACAGAGAGTCT +
Preference number: 6 (lower is better)
Translates to: LQTQGTLTCRATRPA*RASLADGSRSHRES
Trigger: AGACTCTCTGTGGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000560898.5
ENST00000668273.1
CDS CCA 72 bp GCGATTGACCAAGCTTCTTTTACGACCTCCATGGAGTaGGATACGCAGGTGGTGAAGGGGTCCTCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: AIDQASFTTSME*DTQVVKGSSPL
Trigger: GAGCGGCGAGGACCCCTTCACCACCTGCGTATCCCACTCCATGGAGGTCGTAAAAGAAGCTTGGTCAATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668273.1
CDS CAA 90 bp GCCCGGAGACCCAGACTCTTGGCTAAGTTCTGCAGGTCACTGTACTaGAGGGAGTCCAGCTCCTCTAGAGAGGGGATGATCATCGCGATT +
Preference number: 6 (lower is better)
Translates to: ARRPRLLAKFCRSLY*RESSSSREGMIIAI
Trigger: AATCGCGATGATCATCCCCTCTCTAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAGTCTGGGTCTCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558582.5
ENST00000559046.5
ENST00000559596.6
ENST00000559659.1
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS TCA 72 bp ACCCGTTTTAGCTGCAGAGATAGCAGAGCGCTTGAGTaGCCCCTTCAGACCCAAGGTACTCTGACTTGCAGG +
Preference number: 6 (lower is better)
Translates to: TRFSCRDSRALE*PLQTQGTLTCR
Trigger: CCTGCAAGTCAGAGTACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTCTGCAGCTAAAACGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000557840.5
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000560898.5
ENST00000668273.1
CDS CCA 72 bp AGTAGAAGCCACAGAGAGTCTTCCTCTTGGAGGTACTaGAGTCCTGACCCCTCCCTTATTGATGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SRSHRESSSWRY*SPDPSLIDGLL
Trigger: CAGCAGCCCATCAATAAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGAAGACTCTCTGTGGCTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260359.10
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000668273.1
CDS CCA 72 bp TCATCGCGATTCGAAATCCCGGCGATACTCGGAAGATaGATCACCAAACTTCGTCAGCGCGGTTCAAATCCC +
Preference number: 6 (lower is better)
Translates to: SSRFEIPAILGR*ITKLRQRGSNP
Trigger: GGGATTTGAACCGCGCTGACGAAGTTTGGTGATCCATCTTCCGAGTATCGCCGGGATTTCGAATCGCGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000558582.5
ENST00000559046.5
ENST00000559596.6
ENST00000560747.5
ENST00000668273.1
CDS CCA 72 bp AGTAGAAGCCACAGAGAGTCTTCCTCTTGGAGGTACTaGAGTCCTGACCCCTCCCTTATTGATGGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SRSHRESSSWRY*SPDPSLIDGLL
Trigger: AAGCAGCCCATCAATAAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGAAGACTCTCTGTGGCTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414849.6
ENST00000450592.6
ENST00000560747.5
ENST00000560898.5
CDS CAA 72 bp CCATTCACCTGTGAGTCAGGGTCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTGGTGACATGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: PFTCESGSTRTV*HLLLVLVTWPS
Trigger: ACTTGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTCACAGGTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559659.1
CDS CAA 90 bp GCCCCTTCGCATTCCCAAAACCTTTGCTTTCTTCTCCTTTCGTTCTaGCTCGCGTTTCTTCCGTTGCTCTTCCTTTGTCTGGAGATGGGG +
Preference number: 6 (lower is better)
Translates to: APSHSQNLCFLLLSF*LAFLPLLFLCLEMG
Trigger: CCCCATCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAGAAAGCAAAGGTTTTGGGAATGCGAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS CAA 90 bp TGTATATTTCCATTCACCTGTGAGTCAGGGTCCACACGGACAGTCTaGCACCTTCTCCTTGTTTTGGTGACATGGCCAAGTGGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: CIFPFTCESGSTRTV*HLLLVLVTWPSGCL
Trigger: GAGACAGCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTCACAGGTGAATGGAAATATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559659.1
CDS CCA 72 bp GGAAACAGCATTCTCAGCTTCTTGGTGCTCGTCTGGTaGAGAAGGAACTTTTGCAGTAGCTCTGAGATCCTG +
Preference number: 6 (lower is better)
Translates to: GNSILSFLVLVW*RRNFCSSSEIL
Trigger: CAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000558582.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS CAA 72 bp TTGGAGACTGGAGTCTGCGTTGCCTCAGTTGTCAACTaGAATGGGGTAATAACAGCAGCAGAATTCCCCGTG +
Preference number: 6 (lower is better)
Translates to: LETGVCVASVVN*NGVITAAEFPV
Trigger: CACGGGGAATTCTGCTGCTGTTATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS GCA 72 bp CTGTTACCTGAGGAAACAGCATTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGAACTTTTGCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: LLPEETAFSASW*SSGGEGTFAVA
Trigger: AGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS GCA 72 bp ACTCTGTCTGAGGAAACAGCATTCTCAGCTTCTTGGTaGTCGTCTGGTGGAGAAGGAACTTTTGCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: TLSEETAFSASW*SSGGEGTFAVA
Trigger: AGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGACAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558582.5
CDS TCA 72 bp GACAGTTTAAATGAAGAATGCCGCGCTTCCATTGGTTaGAAATGCCTCAAAGGCGGGGTTTCTAACCCTGAC +
Preference number: 6 (lower is better)
Translates to: DSLNEECRASIG*KCLKGGVSNPD
Trigger: GTCAGGGTTAGAAACCCCGCCTTTGAGGCATTTTCAACCAATGGAAGCGCGGCATTCTTCATTTAAACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260359.10
ENST00000558123.5
ENST00000668273.1
CDS CCA 72 bp TCTCTGTTACCTGAGGAAACAGCATTCTCAGCTTCTTaGTGCTCGTCTGGTGGAGAAGGAACTTTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: SLLPEETAFSAS*CSSGGEGTFAV
Trigger: TACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGGTAACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS CCA 72 bp GAGGGGACGAGACAAACTTGCTTTAAGATCAAACACTaGTTTCTTATTGGAGACTGGAGTCTGCGTTGCCTC +
Preference number: 6 (lower is better)
Translates to: EGTRQTCFKIKH*FLIGDWSLRCL
Trigger: GAGGCAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS CCA 72 bp AAGACTCTGTCTGAGGAAACAGCATTCTCAGCTTCTTaGTGCTCGTCTGGTGGAGAAGGAACTTTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: KTLSEETAFSAS*CSSGGEGTFAV
Trigger: TACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGACAGAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558582.5
CDS CAA 90 bp AGGGGACGAGACAAACTTGCTTTAAGATCAAACACTGGTTTCTTATaGGAGACTGGAGTCTGCGTTGCCTCAGTTGTCAACTTGAATGGG +
Preference number: 6 (lower is better)
Translates to: RGRDKLALRSNTGFL*ETGVCVASVVNLNG
Trigger: CCCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS GCA 72 bp ATTCCCAAAACCTTTGCTTTCTTCTCCTTTCGTTCTTaGTCGCGTTTCTTCCGTTGCTCTTCCTTTGTCTGG +
Preference number: 6 (lower is better)
Translates to: IPKTFAFFSFRS*SRFFRCSSFVW
Trigger: CCAGACAAAGGAAGAGCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAGAAAGCAAAGGTTTTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000450592.6
ENST00000558123.5
ENST00000559596.6
ENST00000560177.5
ENST00000560747.5
ENST00000668273.1
CDS CAA 90 bp CAAACTTCGTCAGCGCGGTTCAAATCCCTGGCGCCACTCTTAACTTaGACTAGGCAGAAATTTATAGACAGTTTAAATGAAGAATGCCGC +
Preference number: 6 (lower is better)
Translates to: QTSSARFKSLAPLLT*TRQKFIDSLNEECR
Trigger: GCGGCATTCTTCATTTAAACTGTCTATAAATTTCTGCCTAGTCAAAGTTAAGAGTGGCGCCAGGGATTTGAACCGCGCTGACGAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260359.10
ENST00000558123.5
ENST00000668273.1
CDS GCA 72 bp AGATCAAACACTGGTTTCTTATTGGAGACTGGAGTCTaGGTTGCCTCAGTTGTCAACTTGAATGGGGTAATA +
Preference number: 6 (lower is better)
Translates to: RSNTGFLLETGV*VASVVNLNGVI
Trigger: TATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS CCA 72 bp TGCTTTAAGATCAAACACTGGTTTCTTATTGGAGACTaGAGTCTGCGTTGCCTCAGTTGTCAACTTGAATGG +
Preference number: 6 (lower is better)
Translates to: CFKIKHWFLIGD*SLRCLSCQLEW
Trigger: CCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1
CDS CAA 72 bp TCAGCGCGGTTCAAATCCCTGGCGCCACTCTTAACTTaGACTAGGCAGAAATTTATAGACAGTTTAAATGAA +
Preference number: 6 (lower is better)
Translates to: SARFKSLAPLLT*TRQKFIDSLNE
Trigger: TTCATTTAAACTGTCTATAAATTTCTGCCTAGTCAAAGTTAAGAGTGGCGCCAGGGATTTGAACCGCGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260359.10
ENST00000558123.5
ENST00000668273.1
CDS GCA 72 bp TTTGTGTGGTTCATAGTTGAGGGGACGAGACAAACTTaGTTTAAGATCAAACACTGGTTTCTTATTGGAGAC +
Preference number: 6 (lower is better)
Translates to: FVWFIVEGTRQT*FKIKHWFLIGD
Trigger: GTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCCCTCAACTATGAACCACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260359.10
ENST00000414849.6
ENST00000559596.6
ENST00000560177.5
ENST00000560318.1
ENST00000560747.5
ENST00000668273.1