RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUP93 (Homo sapiens)

Ensembl gene IDs: ENSG00000102900

Ensembl transcript IDs: ENST00000308159.10, ENST00000542526.5, ENST00000562496.5, ENST00000563405.1, ENST00000563437.1, ENST00000563465.1, ENST00000563486.1, ENST00000563858.5, ENST00000564278.1, ENST00000564887.5, ENST00000566315.5, ENST00000566678.1, ENST00000566727.5, ENST00000567081.5, ENST00000567641.5, ENST00000568283.5, ENST00000568656.5, ENST00000569322.1, ENST00000569595.5, ENST00000569842.5, ENST00000569863.5

Found 1026 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCCCCACGGTGAATCACGGAGTCTGAATCTAGGCACGTGGAGCTaGTCCAGAGGATGTGGGGAGGAGCCTGGCACAGGAGGACAAAGC +
Preference number: 1 (lower is better)
Translates to: GPHGESRSLNLGTWS*SRGCGEEPGTGGQS
Trigger: GCTTTGTCCTCCTGTGCCAGGCTCCTCCCCACATCCTCTGGATCAGCTCCACGTGCCTAGATTCAGACTCCGTGATTCACCGTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp GGCCGAGCAGTCAACTCACAGTGGAGCAGCTACAGAGGAGTGCAGTaGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCACTTGC +
Preference number: 1 (lower is better)
Translates to: GRAVNSQWSSYRGVQ*QGLPLPQVQAGGTC
Trigger: GCAAGTGCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTAGCTGCTCCACTGTGAGTTGACTGCTCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp TACAAGGCCGAGCAGTCAACTCACAGTGGAGCAGCTACAGAGGAGTaGAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCA +
Preference number: 1 (lower is better)
Translates to: YKAEQSTHSGAATEE*SGKVYPFLKCKLGA
Trigger: TGCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTAGCTGCTCCACTGTGAGTTGACTGCTCGGCCTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp GTGGTGGTCTGGATTCTGTACATTGCAGACTCAGCACGTGACCCATaGGCCTGCCTGGCCAATTACCTTAATGAGTGGGGAAGGGGGTCG +
Preference number: 1 (lower is better)
Translates to: VVVWILYIADSARDP*ACLANYLNEWGRGS
Trigger: CGACCCCCTTCCCCACTCATTAAGGTAATTGGCCAGGCAGGCTCATGGGTCACGTGCTGAGTCTGCAATGTACAGAATCCAGACCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp AGTCTACCTCAGGGAGCCGTCCATCAAACCAGCAGAGCAGACCACTaGCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACA +
Preference number: 1 (lower is better)
Translates to: SLPQGAVHQTSRADH*PLSQGSSWPIQEQT
Trigger: TGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTTTGATGGACGGCTCCCTGAGGTAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp ATCACGGAGTCTGAATCTAGGCACGTGGAGCTGATCCAGAGGATGTaGGGAGGAGCCTGGCACAGGAGGACAAAGCAAAGCATCTGCTCA +
Preference number: 1 (lower is better)
Translates to: ITESESRHVELIQRM*GGAWHRRTKQSICS
Trigger: TGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCAGGCTCCTCCCCACATCCTCTGGATCAGCTCCACGTGCCTAGATTCAGACTCCGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp AACAGAAACAAAACCAGAAACCCCAGCCTAGTGGGCCCATGTGCCTaGTGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGC +
Preference number: 1 (lower is better)
Translates to: NRNKTRNPSLVGPCA*CTDSVPTQTPTKHG
Trigger: GCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
3UTR CCA 90 bp GGATTCTGTACATTGCAGACTCAGCACGTGACCCATGAGCCTGCCTaGCCAATTACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGA +
Preference number: 1 (lower is better)
Translates to: GFCTLQTQHVTHEPA*PITLMSGEGGRLSR
Trigger: TCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGTAATTGGCCAGGCAGGCTCATGGGTCACGTGCTGAGTCTGCAATGTACAGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp TGTAAAATGGGCACTTCCTGCTCTTTGATGAGCCCGCCCAGCTCGTaGGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACCAGTTT +
Preference number: 1 (lower is better)
Translates to: CKMGTSCSLMSPPSS*VKKEGICRGRAHQF
Trigger: AAACTGGTGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTCATCAAAGAGCAGGAAGTGCCCATTTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp ACTTTCTCCCAATTTGCTGACACAGGGCTCAATTCCTTTCCCAGCTaGCTGAGGCTAAGGGAGAGTTCGCAGTCAGTGTGGGGACTGCCA +
Preference number: 1 (lower is better)
Translates to: TFSQFADTGLNSFPS*LRLRESSQSVWGLP
Trigger: TGGCAGTCCCCACACTGACTGCGAACTCTCCCTTAGCCTCAGTCAGCTGGGAAAGGAATTGAGCCCTGTGTCAGCAAATTGGGAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp ACTACTGCTCAGGGAGCAAACACCCATGGTGCTGATGCCATGTGGTaGTCTGGATTCTGTACATTGCAGACTCAGCACGTGACCCATGAG +
Preference number: 1 (lower is better)
Translates to: TTAQGANTHGADAMW*SGFCTLQTQHVTHE
Trigger: CTCATGGGTCACGTGCTGAGTCTGCAATGTACAGAATCCAGACCACCACATGGCATCAGCACCATGGGTGTTTGCTCCCTGAGCAGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp AGCAAAGGCACCTTTGGGGACCCTTTGGGGATCTTAACATTCTGCTaGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAAACCAGCAGAG +
Preference number: 1 (lower is better)
Translates to: SKGTFGDPLGILTFC*ERVYLREPSIKPAE
Trigger: CTCTGCTGGTTTGATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp GGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTaGGCAATCTACTGTGGGCCAGATACCCCAGAGAGGGCACACAGG +
Preference number: 1 (lower is better)
Translates to: GTGGQSKASAHSNIC*AIYCGPDTPERAHR
Trigger: CCTGTGTGCCCTCTCTGGGGTATCTGGCCCACAGTAGATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp ACAAGCAAAGGCACCTTTGGGGACCCTTTGGGGATCTTAACATTCTaGTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAAACCAGCA +
Preference number: 1 (lower is better)
Translates to: TSKGTFGDPLGILTF*WERVYLREPSIKPA
Trigger: TGCTGGTTTGATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp ACAACTACTGCTCAGGGAGCAAACACCCATGGTGCTGATGCCATGTaGTGGTCTGGATTCTGTACATTGCAGACTCAGCACGTGACCCAT +
Preference number: 1 (lower is better)
Translates to: TTTAQGANTHGADAM*WSGFCTLQTQHVTH
Trigger: ATGGGTCACGTGCTGAGTCTGCAATGTACAGAATCCAGACCACCACATGGCATCAGCACCATGGGTGTTTGCTCCCTGAGCAGTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp GAATCTAGGCACGTGGAGCTGATCCAGAGGATGTGGGGAGGAGCCTaGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTG +
Preference number: 1 (lower is better)
Translates to: ESRHVELIQRMWGGA*HRRTKQSICSFKYL
Trigger: CAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCAGGCTCCTCCCCACATCCTCTGGATCAGCTCCACGTGCCTAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp ATGATGGGTGACAACTACTGCTCAGGGAGCAAACACCCATGGTGCTaGTGCCATGTGGTGGTCTGGATTCTGTACATTGCAGACTCAGCA +
Preference number: 1 (lower is better)
Translates to: MMGDNYCSGSKHPWC*CHVVVWILYIADSA
Trigger: TGCTGAGTCTGCAATGTACAGAATCCAGACCACCACATGGCATCAGCACCATGGGTGTTTGCTCCCTGAGCAGTAGTTGTCACCCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp TCTCCTACAAATGTCTCTCTCAGCAAGTCCTTAACTGCCAACCAGTaGCCACTTTTCTCCCAACTCACAGCTCCCCTAGCAGAGCAGCTC +
Preference number: 1 (lower is better)
Translates to: SPTNVSLSKSLTANQ*PLFSQLTAPLAEQL
Trigger: GAGCTGCTCTGCTAGGGGAGCTGTGAGTTGGGAGAAAAGTGGTCACTGGTTGGCAGTTAAGGACTTGCTGAGAGAGACATTTGTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp GGGCCCACATTATCCCGCTCAGCTGCCTGCCTAGCTCTTCAAAACTaGGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAATG +
Preference number: 1 (lower is better)
Translates to: GPTLSRSAACLALQN*VSQSFPMPTKAQTM
Trigger: CATTGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCTAGGCAGGCAGCTGAGCGGGATAATGTGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp CCCTGTGACAAGACAGAAACTTCTCCCTACAAGCAAAGGCACCTTTaGGGACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTA +
Preference number: 1 (lower is better)
Translates to: PCDKTETSPYKQRHL*GPFGDLNILLGKSL
Trigger: TAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTTGTAGGGAGAAGTTTCTGTCTTGTCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp CTTCTCATTTTAGGACCCATCTACAGGTCAAAGAACCTCATCCCCTaGATGCAGGGCTGGTGTGCAGTTCTCTCTGAGACAAGTAGAACT +
Preference number: 1 (lower is better)
Translates to: LLILGPIYRSKNLIP*MQGWCAVLSETSRT
Trigger: AGTTCTACTTGTCTCAGAGAGAACTGCACACCAGCCCTGCATCCAGGGGATGAGGTTCTTTGACCTGTAGATGGGTCCTAAAATGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp GCAAATTCAGCCTGTTTCTCATCTCTGCACAATTCCAGAGGCCTGTaGTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTGC +
Preference number: 1 (lower is better)
Translates to: ANSACFSSLHNSRGL*SIAQSACRTRTGIC
Trigger: GCAAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAGATGAGAAACAGGCTGAATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp CAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTaGACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTA +
Preference number: 1 (lower is better)
Translates to: QPDVVALQIQPVSHL*TIPEACAQSHNQLV
Trigger: TACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp TTCACAGTACATCAAATTTCCACCCCCTTCTCAATGTTTCCCTGCTaGTGTGCAGCTCTGCAAGTTTCTGTCTTTGAAGGAACAGCCCTG +
Preference number: 1 (lower is better)
Translates to: FTVHQISTPFSMFPC*CAALQVSVFEGTAL
Trigger: CAGGGCTGTTCCTTCAAAGACAGAAACTTGCAGAGCTGCACAGCAGCAGGGAAACATTGAGAAGGGGGTGGAAATTTGATGTACTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp ATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATaGAGAACACATCCACCAACGCTCTCCCACCCTCTCCCTTCTCCC +
Preference number: 1 (lower is better)
Translates to: ILNRVNAEVTVQKGT*RTHPPTLSHPLPSP
Trigger: GGGAGAAGGGAGAGGGTGGGAGAGCGTTGGTGGATGTGTTCTGCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp TCAGGACTTCTGGGCATAAGCTGTAATGATGGGTACATGACAACCTaGTGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCAC +
Preference number: 1 (lower is better)
Translates to: SGLLGISCNDGYMTT*CCGLANSACFSSLH
Trigger: GTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTCATGTACCCATCATTACAGCTTATGCCCAGAAGTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp TTATCTTCTTTCTCCTACAAATGTCTCTCTCAGCAAGTCCTTAACTaGCAACCAGTGACCACTTTTCTCCCAACTCACAGCTCCCCTAGC +
Preference number: 1 (lower is better)
Translates to: LSSFSYKCLSQQVLN*QPVTTFLPTHSSPS
Trigger: GCTAGGGGAGCTGTGAGTTGGGAGAAAAGTGGTCACTGGTTGGCAGTTAAGGACTTGCTGAGAGAGACATTTGTAGGAGAAAGAAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp GTAGGACAAGAACTGGGATTTGCTCCATCCGAGTCCTGGCCCTTCTaGTATGAACCTACTTATCTTCTTTCTCCTACAAATGTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: VGQELGFAPSESWPF*YEPTYLLSPTNVSL
Trigger: GAGAGAGACATTTGTAGGAGAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp AAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATCTACTGTaGGCCAGATACCCCAGAGAGGGCACACAGGAGAAGCATATTTCA +
Preference number: 1 (lower is better)
Translates to: KQSICSFKYLLSNLL*ARYPREGTQEKHIS
Trigger: TGAAATATGCTTCTCCTGTGTGCCCTCTCTGGGGTATCTGGCCCACAGTAGATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp ACAAGAACTGGGATTTGCTCCATCCGAGTCCTGGCCCTTCTGGTATaGACCTACTTATCTTCTTTCTCCTACAAATGTCTCTCTCAGCAA +
Preference number: 1 (lower is better)
Translates to: TRTGICSIRVLALLV*TYLSSFSYKCLSQQ
Trigger: TTGCTGAGAGAGACATTTGTAGGAGAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp TTATTCACAGTACATCAAATTTCCACCCCCTTCTCAATGTTTCCCTaGTGCTGTGCAGCTCTGCAAGTTTCTGTCTTTGAAGGAACAGCC +
Preference number: 1 (lower is better)
Translates to: LFTVHQISTPFSMFP*CCAALQVSVFEGTA
Trigger: GGCTGTTCCTTCAAAGACAGAAACTTGCAGAGCTGCACAGCAGCAGGGAAACATTGAGAAGGGGGTGGAAATTTGATGTACTGTGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp AATCAGCTTGTAGGACAAGAACTGGGATTTGCTCCATCCGAGTCCTaGCCCTTCTGGTATGAACCTACTTATCTTCTTTCTCCTACAAAT +
Preference number: 1 (lower is better)
Translates to: NQLVGQELGFAPSES*PFWYEPTYLLSPTN
Trigger: ATTTGTAGGAGAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGTCCTACAAGCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp CTCAAAGTGCCCCCAATTTCATTAGAAAGATCGAAATCTCACATCTaGAAGACAAGACGCCTAGTGCCACTTTCTCTTAGTTTCTCTGGG +
Preference number: 1 (lower is better)
Translates to: LKVPPISLERSKSHI*KTRRLVPLSLSFSG
Trigger: CCCAGAGAAACTAAGAGAAAGTGGCACTAGGCGTCTTGTCTTCCAGATGTGAGATTTCGATCTTTCTAATGAAATTGGGGGCACTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp GAAACAAGTGGCAGAAAGATTTATTTCCTTCCTGTCCCTGCCCTGTaGGGGATACCAATATATTATGGAACTGTCAGAAGATGGTGGAAG +
Preference number: 1 (lower is better)
Translates to: ETSGRKIYFLPVPAL*GIPIYYGTVRRWWK
Trigger: CTTCCACCATCTTCTGACAGTTCCATAATATATTGGTATCCCTCACAGGGCAGGGACAGGAAGGAAATAAATCTTTCTGCCACTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp TCGGTTGGAAACAAGTGGCAGAAAGATTTATTTCCTTCCTGTCCCTaGCCTGTGAGGGATACCAATATATTATGGAACTGTCAGAAGATG +
Preference number: 1 (lower is better)
Translates to: SVGNKWQKDLFPSCP*PVRDTNILWNCQKM
Trigger: CATCTTCTGACAGTTCCATAATATATTGGTATCCCTCACAGGGCAGGGACAGGAAGGAAATAAATCTTTCTGCCACTTGTTTCCAACCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 90 bp GAGCCTACTTTTAAAGAATTATGCACAACTCTGGGAACAAATCAGTaGTTAATTTACCTCAGATATTCCAGCTACCTAGCACGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: EPTFKELCTTLGTNQ*LIYLRYSSYLARPS
Trigger: GCTGGGCCGTGCTAGGTAGCTGGAATATCTGAGGTAAATTAAGCACTGATTTGTTCCCAGAGTTGTGCATAATTCTTTAAAAGTAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp CCAGCACACAAAGAGGTTTTGAAATCATCTGCTGCAATGGAATCTTaGCTGATAAATACACGTGGCCTATCTAGCCAGTCACAAGTTATG +
Preference number: 1 (lower is better)
Translates to: PAHKEVLKSSAAMES*LINTRGLSSQSQVM
Trigger: CATAACTTGTGACTGGCTAGATAGGCCACGTGTATTTATCAGCCAAGATTCCATTGCAGCAGATGATTTCAAAACCTCTTTGTGTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp GAGGGATACCAATATATTATGGAACTGTCAGAAGATGGTGGAAGATaGGAAGACTTGTGGATTCAGCGTAGGATAAAGAATGGGGGATAT +
Preference number: 1 (lower is better)
Translates to: EGYQYIMELSEDGGR*EDLWIQRRIKNGGY
Trigger: ATATCCCCCATTCTTTATCCTACGCTGAATCCACAAGTCTTCCCATCTTCCACCATCTTCTGACAGTTCCATAATATATTGGTATCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp TATATTATGGAACTGTCAGAAGATGGTGGAAGATGGGAAGACTTGTaGATTCAGCGTAGGATAAAGAATGGGGGATATTTTCTTCCACAG +
Preference number: 1 (lower is better)
Translates to: YIMELSEDGGRWEDL*IQRRIKNGGYFLPQ
Trigger: CTGTGGAAGAAAATATCCCCCATTCTTTATCCTACGCTGAATCCACAAGTCTTCCCATCTTCCACCATCTTCTGACAGTTCCATAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 90 bp ATATTTCAAAAACCAAGGTTAGGACAGGAAAATATCCTCTTTCCCTaGGTTAGCAACTTAGAACCACGAGTACTTCACTTAGGTGATCCT +
Preference number: 1 (lower is better)
Translates to: IFQKPRLGQENILFP*VSNLEPRVLHLGDP
Trigger: AGGATCACCTAAGTGAAGTACTCGTGGTTCTAAGTTGCTAACCCAGGGAAAGAGGATATTTTCCTGTCCTAACCTTGGTTTTTGAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp GATATTTTCTTCCACAGTTTAGACAACTCCTGTTTAATGAGATGCTaGCTTCTTCCTGGTATTTCTGAGATGCAGGAACAAAAGCTCAAT +
Preference number: 1 (lower is better)
Translates to: DIFFHSLDNSCLMRC*LLPGISEMQEQKLN
Trigger: ATTGAGCTTTTGTTCCTGCATCTCAGAAATACCAGGAAGAAGTCAGCATCTCATTAAACAGGAGTTGTCTAAACTGTGGAAGAAAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 90 bp ACAGATCAACCAGAAACCTGTTTCTCCCAAGAACATGTCAATCACTaGAGTGACTGTATTTTCTCAATTAGGAATTCAGACAATAATCTG +
Preference number: 1 (lower is better)
Translates to: TDQPETCFSQEHVNH*SDCIFSIRNSDNNL
Trigger: CAGATTATTGTCTGAATTCCTAATTGAGAAAATACAGTCACTTCAGTGATTGACATGTTCTTGGGAGAAACAGGTTTCTGGTTGATCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
3UTR-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGGGAAGGGGGTCGTCTaGGCAGAGGAACTGACCACC +
Preference number: 2 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNGKGVV*AEELTT
Trigger: GGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAGACAGTCCTCCAGGGTaGCAAGATGGGACTAGAGGA +
Preference number: 2 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSDSPPG*QDGTRG
Trigger: TCCTCTAGTCCCATCTTGTCACCCTGGAGGACTGTC...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGATGTACTGACAGTGTaGCGACCCAGACTCCCACAA +
Preference number: 2 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSDVLTV*RPRLPQ
Trigger: TTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATC...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTACAGAGGAGTGCAGTaGCAAGGTTTACCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNYRGVQ*QGLPLP
Trigger: AGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAACCCATGAGCCTGCCTaGCCAATTACCTTAATGAGT +
Preference number: 2 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSTHEPA*PITLMS
Trigger: ACTCATTAAGGTAATTGGCCAGGCAGGCTCATGGGT...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCTCAAGTGCAAGCTaGGGGCACTTGCAACCTTCC +
Preference number: 2 (lower is better)
Translates to: DPLGILTFCWERVYLREPSSSAS*GHLQPS
Trigger: GGAAGGTTGCAAGTGCCCCCAGCTTGCACTTGAGGA...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGGCAGTCAACTCACAGTaGAGCAGCTACAGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: PQAASFLEHGILPISSSWAVNSQ*SSYRGV
Trigger: CACTCCTCTGTAGCTGCTCCACTGTGAGTTGACTGC...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAGAGTCCTGGCCCTTCTaGTATGAACCTACTTATCTT +
Preference number: 2 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSESWPF*YEPTYL
Trigger: AAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTC...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAATGCAGACTCAGCACGTaGCCCATGAGCCTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQCRLST*PMSLPG
Trigger: GCCAGGCAGGCTCATGGGTCACGTGCTGAGTCTGCA...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGCTGATGCCATGTGGTaGTCTGGATTCTGTACATTG +
Preference number: 2 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSADAMW*SGFCTL
Trigger: CAATGTACAGAATCCAGACCACCACATGGCATCAGC...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAATCTTAACATTCTGCTaGGAAAGAGTCTACCTCAGG +
Preference number: 2 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSILTFC*ERVYLR
Trigger: CCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGAT...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAAGCCTCCCGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGSLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCGGGAGGCT...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGCGGAGGACAGGAGCTaGGTCTGCATCCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SSSKLRISVISDAHKSTNAEDRS*VCILAP
Trigger: TGGGGCCAGGATGCAGACCCAGCTCCTGTCCTCCGC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAGGGATTACAGGCGCCTaGCACCATGCCCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGGITGA*HHAQLI
Trigger: AATCAGCTGGGCATGGTGGCAGGCGCCTGTAATCCC...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGTGGGCCCATGTGCCTaGTGTACTGACAGTGTGCCG +
Preference number: 2 (lower is better)
Translates to: SSSKLRISVISDAHKSTNVGPCA*CTDSVP
Trigger: CGGCACACTGTCAGTACATCAGGCACATGGGCCCAC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAGGACATGGAGTGCTTaGTATTTCACACACAAATCT +
Preference number: 2 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNRTWSA*YFTHKS
Trigger: AGATTTGTGTGTGAAATATCAAGCACTCCATGTCCT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAATCAGCACGTGACCCATaGGCCTGCCTGGCCAATTAC +
Preference number: 2 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQSARDP*ACLANY
Trigger: GTAATTGGCCAGGCAGGCTCATGGGTCACGTGCTGA...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAACTGGTCTTGAACTCCTaGTCTCAGGTGATCACCTGC +
Preference number: 2 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQLVLNS*SQVITC
Trigger: GCAGGTGATCACCTGAGATCAGGAGTTCAAGACCAG...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTATGATCTCAGATCACTaGAACCTTCGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: PEACAQSHNQLVGQELGFMISDH*NLRLPG
Trigger: ACCCGGGAGGCGAAGGTTGCAGTGATCTGAGATCAT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAACTCAAGCGAACTGCCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQLKRTA*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGGCAGTTCGCTTGAG...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAGCCTCCCGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDSLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCGGGAGGCT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 90 bp AGACAGAAACTTCTCCCTACAAGCAAAGGCACCTTTGGGGACCCTTaGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RQKLLPTSKGTFGDP*GILTFCWERVYLRE
Trigger: CTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTTGTAGGGAGAAGTTTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCGTGGGCCCATGTGCCTaGTGTACTGACAGTGTGCCG +
Preference number: 2 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLVGPCA*CTDSVP
Trigger: CGGCACACTGTCAGTACATCAGGCACATGGGCCCAC...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCTGCAGACTCAGCACGTaGCCCATGAGCCTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCCRLST*PMSLPG
Trigger: GCCAGGCAGGCTCATGGGTCACGTGCTGAGTCTGCA...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAAGAGCAAATGATGGGTaGCAACTACTGCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQRANDG*QLLLRE
Trigger: CTCCCTGAGCAGTAGTTGTCACCCATCATTTGCTCT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACCCCCTCTGGGATCACTaGCTCCCCACTTCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: SSSKLRISVISDAHKSTNPLWDH*LPTSCS
Trigger: TGAACAGGAAGTGGGGAGTCAGTGATCCCAGAGGGG...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGGATGTACTGACAGTGTaGCGACCCAGACTCCCACAA +
Preference number: 2 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEDVLTV*RPRLPQ
Trigger: TTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATC...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGGGATTACAGGCGCCTaGCACCATGCCCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTGITGA*HHAQLI
Trigger: AATCAGCTGGGCATGGTGGCAGGCGCCTGTAATCCC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTGCTTTTATCTCCACTaGGATTGCAACAGAACGGCA +
Preference number: 2 (lower is better)
Translates to: DPLGILTFCWERVYLREPCFYLH*DCNRTA
Trigger: TGCCGTTCTGTTGCAATCCCAGTGGAGATAAAAGCA...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAGACTTTGTCAGGCCTaGGTCAACCCGCCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: NLLATDRDSGEGTILNRVRLCQA*VNPPAQ
Trigger: CTGGGCTGGCGGGTTGACCCAGGCCTGACAAAGTCT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATATGTGCCTGATGTACTaGCAGTGTGCCGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDMCLMY*QCADPD
Trigger: GTCTGGGTCGGCACACTGTCAGTACATCAGGCACAT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGGGAAACAGAGCAAATaGTGGGTGACAACTACTGCT +
Preference number: 2 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQGKQSK*WVTTTA
Trigger: AGCAGTAGTTGTCACCCATCATTTGCTCTGTTTCCC...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATGACAGTCCTCCAGGGTaGCAAGATGGGACTAGAGGA +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDDSPPG*QDGTRG
Trigger: TCCTCTAGTCCCATCTTGTCACCCTGGAGGACTGTC...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGCAGCTACAGAGGAGTaGAGTGGCAAGGTTTACCCC +
Preference number: 2 (lower is better)
Translates to: SSSKLRISVISDAHKSTNAATEE*SGKVYP
Trigger: GGGGTAAACCTTGCCACTGCACTCCTCTGTAGCTGC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTAATTACCTTAATGAGTaGGGAAGGGGGTCGTCTGAG +
Preference number: 2 (lower is better)
Translates to: PEACAQSHNQLVGQELGFNYLNE*GRGSSE
Trigger: CTCAGACGACCCCCTTCCCCACTCATTAAGGTAATT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTTCTCAAGGCTCCAGTTaGCCCATTCAGGAACAAACA +
Preference number: 2 (lower is better)
Translates to: PEACAQSHNQLVGQELGFSQGSS*PIQEQT
Trigger: TGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGA...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAAAGCAAAGGCACCTTTaGGGACCCTTTGGGGATCTT +
Preference number: 2 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGKQRHL*GPFGDL
Trigger: AAGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTT...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATGCTCCATCCGAGTCCTaGCCCTTCTGGTATGAACCT +
Preference number: 2 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNAPSES*PFWYEP
Trigger: AGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGC...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAGATGACCACACCCTGTaGCAAGACAGAAACTTCTCC +
Preference number: 2 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQDDHTL*QDRNFS
Trigger: GGAGAAGTTTCTGTCTTGTCACAGGGTGTGGTCATC...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTGGAGTGCAGTGGCATaGTCTCAGATCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: SSSKLRISVISDAHKSTNWSAVA*SQITAT
Trigger: GGTTGCAGTGATCTGAGATCATGCCACTGCACTCCA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTCTGGCCCTTCTGGTATaGACCTACTTATCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: PEACAQSHNQLVGQELGFLALLV*TYLSSF
Trigger: GAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAG...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAGTAATGATGGGTACATaGCAACCTGATGTTGTGGCC +
Preference number: 2 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGVMMGT*QPDVVA
Trigger: GGCCACAACATCAGGTTGTCATGTACCCATCATTAC...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTACTAGGCCAGGTCTGCTaGGGCCACCAAAGCATATGT +
Preference number: 2 (lower is better)
Translates to: NLLATDRDSGEGTILNRVLGQVC*GHQSIC
Trigger: ACATATGCTTTGGTGGCCTCAGCAGACCTGGCCTAG...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCGAGGAGGACATGGAGTaGTTGATATTTCACACACAA +
Preference number: 2 (lower is better)
Translates to: LGILTFCWERVYLREPSIEEDME*LIFHTQ
Trigger: TTGTGTGTGAAATATCAAGCACTCCATGTCCTCCTC...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATACAAGAACTGGGATTTaGTCCATCCGAGTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDTRTGI*SIRVLA
Trigger: GGCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATAAAATGGGCACTTCCTaGTCTTTGATGAGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNKMGTS*SLMSPP
Trigger: GGGCGGGCTCATCAAAGAGCAGGAAGTGCCCATTTT...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATAGTCAGTGTGGGGACTaGCAAGACTTTGTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNSQCGD*QDFVRP
Trigger: AGGCCTGACAAAGTCTTGGCAGTCCCCACACTGACT...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATGCAGTCAACTCACAGTaGAGCAGCTACAGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDAVNSQ*SSYRGV
Trigger: CACTCCTCTGTAGCTGCTCCACTGTGAGTTGACTGC...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAGCTTCCTGTGTAGCTaGGATTACAGGTGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDSFLCS*DYRCLP
Trigger: TGGCAGGCACCTGTAATCCCAGCTACACAGGAAGCT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACTGAGCAATCTACTGTaGGCCAGATACCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTLSNLL*ARYPRE
Trigger: CTCTCTGGGGTATCTGGCCCACAGTAGATTGCTCAG...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 90 bp CAACAGAACGGCAAACTGATGAATCCTGCAATCAGAGCTGATGATTaGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTA +
Preference number: 2 (lower is better)
Translates to: QQNGKLMNPAIRADD*GDGLGPSGLKSHSL
Trigger: TAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATCAGCTCTGATTGCAGGATTCATCAGTTTGCCGTTCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCATGTGCCTGATGTACTaGCAGTGTGCCGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCMCLMY*QCADPD
Trigger: GTCTGGGTCGGCACACTGTCAGTACATCAGGCACAT...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATTGAAGGAACAGCCCTaGGTCTCATTTGATCCTGGG +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTLKEQP*VSFDPG
Trigger: CCCAGGATCAAATGAGACTCAGGGCTGTTCCTTCAA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCTACCCCTTCCTCAAGTaGAAGCTGGGGGCACTTGCA +
Preference number: 2 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCYPFLK*KLGALA
Trigger: TGCAAGTGCCCCCAGCTTGCACTTGAGGAAGGGGTA...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCGCAGCTACAGAGGAGTaGAGTGGCAAGGTTTACCCC +
Preference number: 2 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCAATEE*SGKVYP
Trigger: GGGGTAAACCTTGCCACTGCACTCCTCTGTAGCTGC...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAAGTAGAACTGCAGGATaGAAGGAAAGGCAAATCCAC +
Preference number: 2 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGSRTAG*KERQIH
Trigger: GTGGATTTGCCTTTCCTTGCATCCTGCAGTTCTACT...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCACAAGAACTGGGATTTaGTCCATCCGAGTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLTRTGI*SIRVLA
Trigger: GGCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGACTGATGTTGTGGCCTTaGAAATTCAGCCTGTTTCTC +
Preference number: 2 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGLMLWP*KFSLFL
Trigger: GAGAAACAGGCTGAATTTGCAAGGCCACAACATCAG...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTACAGAGGAGTGCAGTaGCAAGGTTTACCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNYRGVQ*QGLPLP
Trigger: AGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCTGGAGTGCAGTGGCATaGTCTCAGATCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCWSAVA*SQITAT
Trigger: GGTTGCAGTGATCTGAGATCATGCCACTGCACTCCA...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTACACCTTCTTTCAGACTaGATGCCTATTAAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: NLLATDRDSGEGTILNRVHLLSD*MPIKGP
Trigger: GGGGCCCTTAATAGGCATTCAGTCTGAAAGAAGGTG...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACCTGTTTCTCATCTCTaGACAATTCCAGAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTPVSHL*TIPEAC
Trigger: ACAGGCCTCTGGAATTGTGCAGAGATGAGAAACAGG...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAAAGGCTTTGTTTCCTaGCTCATTTTGGGTAGATTT +
Preference number: 2 (lower is better)
Translates to: LGILTFCWERVYLREPSIKGFVS*LILGRF
Trigger: AAATCTACCCAAAATGAGCCAGGAAACAAAGCCTTT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATCTCAAGGCTCCAGTTaGCCCATTCAGGAACAAACA +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTSQGSS*PIQEQT
Trigger: TGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAATCCTTCCTGGAACATaGAATCCTACCGATAAGCAG +
Preference number: 2 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQILPGT*NPTDKQ
Trigger: CTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGAT...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTACTAGTAAAGCTCAATTaGAGACAGTCCTCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: NLLATDRDSGEGTILNRVLVKLN*RQSSRV
Trigger: CACCCTGGAGGACTGTCTTCAATTGAGCTTTACTAG...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTTAACTGCCAACCAGTaGCCACTTTTCTCCCAACTC +
Preference number: 2 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLLTANQ*PLFSQL
Trigger: GAGTTGGGAGAAAAGTGGTCACTGGTTGGCAGTTAA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAGGGTACATGACAACCTaGTGTTGTGGCCTTGCAAAT +
Preference number: 2 (lower is better)
Translates to: NLLATDRDSGEGTILNRVGYMTT*CCGLAN
Trigger: ATTTGCAAGGCCACAACATCAGGTTGTCATGTACCC...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGGGATCTTAACATTCTaGTGGGAAAGAGTCTACCTC +
Preference number: 2 (lower is better)
Translates to: SSSKLRISVISDAHKSTNGILTF*WERVYL
Trigger: GAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATCTGATGTTGTGGCCTTaGAAATTCAGCCTGTTTCTC +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDLMLWP*KFSLFL
Trigger: GAGAAACAGGCTGAATTTGCAAGGCCACAACATCAG...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGCAAATGCTGGACACTaGGGAAAAGTCTGTAGTTCT +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTANAGH*GKVCSS
Trigger: AGAACTACAGACTTTTCCGCAGTGTCCAGCATTTGC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATGCTTTTATCTCCACTaGGATTGCAACAGAACGGCA +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTCFYLH*DCNRTA
Trigger: TGCCGTTCTGTTGCAATCCCAGTGGAGATAAAAGCA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATGCCATGTGGTGGTCTaGATTCTGTACATTGCAGAC +
Preference number: 2 (lower is better)
Translates to: NLLATDRDSGEGTILNRVCHVVV*ILYIAD
Trigger: GTCTGCAATGTACAGAATCCAGACCACCACATGGCA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATCGAAATCTCACATCTaGAAGACAAGACGCCTAGTG +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTSKSHI*KTRRLV
Trigger: CACTAGGCGTCTTGTCTTCCAGATGTGAGATTTCGA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATGAAGATGGTGGAAGATaGGAAGACTTGTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNEDGGR*EDLWIQ
Trigger: CTGAATCCACAAGTCTTCCCATCTTCCACCATCTTC...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp AAACCTGTTTCTCCCAAGAACATGTCAATCACTGAAGTGACTGTATTTTCTCAACCAGGCCAAGGTATCTaGAAGGGAACCACTCTGGAA +
Preference number: 2 (lower is better)
Translates to: KPVSPKNMSITEVTVFSQPGQGI*KGTTLE
Trigger: TTCCAGAGTGGTTCCCTTTCAGATACCTTGGCCTGG...TTGAGAAAATACAGTCACTTCAGTGATTGACATGTTCTTGGGAGAAACAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
3UTR-3UTR GCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCTCAATGTTTCCCTGCTaGTGTGCAGCTCTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCSMFPC*CAALQV
Trigger: AACTTGCAGAGCTGCACAGCAGCAGGGAAACATTGA...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTAAAGGCTTTGTTTCCTaGCTCATTTTGGGTAGATTT +
Preference number: 2 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSKGFVS*LILGRF
Trigger: AAATCTACCCAAAATGAGCCAGGAAACAAAGCCTTT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATATCTTAACATTCTGCTaGGAAAGAGTCTACCTCAGG +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDILTFC*ERVYLR
Trigger: CCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGAT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCATCCTTCCTGGAACATaGAATCCTACCGATAAGCAG +
Preference number: 2 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLILPGT*NPTDKQ
Trigger: CTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGAT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAGCTGCAATGGAATCTTaGCTGATAAATACACGTGGC +
Preference number: 2 (lower is better)
Translates to: NLLATDRDSGEGTILNRVAAMES*LINTRG
Trigger: GCCACGTGTATTTATCAGCCAAGATTCCATTGCAGC...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 90 bp CTTCTTAAGGCTTTTTCTAGGTCTATGCTTTTATCTCCACTGGGATaGCAACAGAACGGCAAACTGATGAATCCTGCAATCAGAGCTGAT +
Preference number: 2 (lower is better)
Translates to: LLKAFSRSMLLSPLG*QQNGKLMNPAIRAD
Trigger: ATCAGCTCTGATTGCAGGATTCATCAGTTTGCCGTTCTGTTGCAATCCCAGTGGAGATAAAAGCATAGACCTAGAAAAAGCCTTAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATCTAAGTTGCACTTTATaGAAAGTCCACAGAGTACTC +
Preference number: 2 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDLSCTL*KVHRVL
Trigger: GAGTACTCTGTGGACTTTTCATAAAGTGCAACTTAG...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGGTTTTGAAATCATCTaGTGCAATGGAATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SSSKLRISVISDAHKSTNGFEII*CNGILA
Trigger: AGCCAAGATTCCATTGCAGCAGATGATTTCAAAACC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCACTGTCAGAAGATGGTaGAAGATGGGAAGACTTGTG +
Preference number: 2 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCTVRRW*KMGRLV
Trigger: CACAAGTCTTCCCATCTTCCACCATCTTCTGACAGT...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACTTTTTCTAGGTCTATaGTTTTATCTCCACTGGGAT +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTLFLGL*FYLHWD
Trigger: ATCCCAGTGGAGATAAAAGCATAGACCTAGAAAAAG...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATAAGTCTGTAGTTCTTTaGTTTAAAGCTGCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNKSVVL*FKAACS
Trigger: AGAACAGGCAGCTTTAAAGCAAAGAACTACAGACTT...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTTTGAAATCATCTGCTaGAATGGAATCTTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: SSSKLRISVISDAHKSTNFEIIC*NGILAD
Trigger: ATCAGCCAAGATTCCATTGCAGCAGATGATTTCAAA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR GCA 90 bp CGGATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTTCTTCTGATGGGGATGTATaGACTCACAGAAAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: RIIEELNQTSQINQKPVSSDGDV*THRKAR
Trigger: CCTGGCTTTTCTGTGAGTGCATACATCCCCATCAGA...AGAAACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563486.1
3UTR-3UTR CCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCAATCCACGATTCTCATaGGATAGTGAAGAAGAGGTA +
Preference number: 2 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLNPRFS*DSEEEV
Trigger: TACCTCTTCTTCACTATCCCATGAGAATCGTGGATT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATCGGTTGGAAACAAGTaGCAGAAAGATTTATTTCCT +
Preference number: 2 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTSVGNK*QKDLFP
Trigger: AGGAAATAAATCTTTCTGCCACTTGTTTCCAACCGA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 90 bp CAATATATTATGGAACTGTCAGAAGATGGTGGAAGATGGGAAGACTaGTGGATTCAGCGTAGGATAAAGAATGGGGGATATTTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: QYIMELSEDGGRWED*WIQRRIKNGGYFLP
Trigger: TGGAAGAAAATATCCCCCATTCTTTATCCTACGCTGAATCCACAAGTCTTCCCATCTTCCACCATCTTCTGACAGTTCCATAATATATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCCTAAGTTGCACTTTATaGAAAGTCCACAGAGTACTC +
Preference number: 2 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCLSCTL*KVHRVL
Trigger: GAGTACTCTGTGGACTTTTCATAAAGTGCAACTTAG...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR TCA 90 bp CGGATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTTCTGAACATGTCAATCACTaGAGTGACTGTATTTTCTCA +
Preference number: 2 (lower is better)
Translates to: RIIEELNQTSQINQKPVSEHVNH*SDCIFS
Trigger: TGAGAAAATACAGTCACTTCAGTGATTGACATGTTC...AGAAACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATCCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
3UTR-3UTR TCA 90 bp AGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTGTTCCATGAAGTGTTTTaGATTTTCGAGGGTGTACAT +
Preference number: 2 (lower is better)
Translates to: RIVLVFLYTTNILATAPLFHEVF*IFEGVH
Trigger: ATGTACACCCTCGAAAATTCAAAACACTTCATGGAA...CAAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563405.1
3UTR GCA 72 bp CAGGGAGCCGTCCATCAAACCAGCAGAGCAGACCACTaGCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAG +
Preference number: 3 (lower is better)
Translates to: QGAVHQTSRADH*PLSQGSSWPIQ
Trigger: CTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTTTGATGGACGGCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp AAACCCCAGCCTAGTGGGCCCATGTGCCTGATGTACTaGCAGTGTGCCGACCCAGACTCCCACAAAGCATGG +
Preference number: 3 (lower is better)
Translates to: KPQPSGPMCLMY*QCADPDSHKAW
Trigger: CCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
3UTR TCA 72 bp GGCACTTCCTGCTCTTTGATGAGCCCGCCCAGCTCGTaGGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: GTSCSLMSPPSS*VKKEGICRGRA
Trigger: AGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTCATCAAAGAGCAGGAAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp AAAACCAGAAACCCCAGCCTAGTGGGCCCATGTGCCTaGTGTACTGACAGTGTGCCGACCCAGACTCCCACA +
Preference number: 3 (lower is better)
Translates to: KTRNPSLVGPCA*CTDSVPTQTPT
Trigger: TGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
3UTR-3UTR CAA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACATGACAACCTGATGTaGTGGCCTTGCAAATTCAGC +
Preference number: 3 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSHDNLM*WPCKFS
Trigger: GCTGAATTTGCAAGGCCACAACATCAGGTTGTCATG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GGCACCTTTGGGGACCCTTTGGGGATCTTAACATTCTaGTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATC +
Preference number: 3 (lower is better)
Translates to: GTFGDPLGILTF*WERVYLREPSI
Trigger: GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp GTCAACTCACAGTGGAGCAGCTACAGAGGAGTGCAGTaGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGG +
Preference number: 3 (lower is better)
Translates to: VNSQWSSYRGVQ*QGLPLPQVQAG
Trigger: CCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTAGCTGCTCCACTGTGAGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp ACATTGCAGACTCAGCACGTGACCCATGAGCCTGCCTaGCCAATTACCTTAATGAGTGGGGAAGGGGGTCGT +
Preference number: 3 (lower is better)
Translates to: TLQTQHVTHEPA*PITLMSGEGGR
Trigger: ACGACCCCCTTCCCCACTCATTAAGGTAATTGGCCAGGCAGGCTCATGGGTCACGTGCTGAGTCTGCAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCATCTGGATTCTGTACATaGCAGACTCAGCACGTGACC +
Preference number: 3 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSSGFCT*QTQHVT
Trigger: GGTCACGTGCTGAGTCTGCAATGTACAGAATCCAGA...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GAGCAGTCAACTCACAGTGGAGCAGCTACAGAGGAGTaGAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAG +
Preference number: 3 (lower is better)
Translates to: EQSTHSGAATEE*SGKVYPFLKCK
Trigger: CTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTAGCTGCTCCACTGTGAGTTGACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp AGGCAGCCAGGTGTACAGATTGTGCTAGCGCAGAGCTaGGTTTCTGCCAGCACCCCGTCCCTTTTTCTTTTT +
Preference number: 3 (lower is better)
Translates to: RQPGVQIVLAQS*VSASTPSLFLF
Trigger: AAAAAGAAAAAGGGACGGGGTGCTGGCAGAAACCCAGCTCTGCGCTAGCACAATCTGTACACCTGGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCATTTGGGGGATGGTCTaGGACCATCTGGACTTAAGT +
Preference number: 3 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGIWGMV*DHLDLS
Trigger: ACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAAT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCATTATCTCCACTGGGATaGCAACAGAACGGCAAACTG +
Preference number: 3 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSLSPLG*QQNGKL
Trigger: CAGTTTGCCGTTCTGTTGCAATCCCAGTGGAGATAA...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GACCCATCTACAGGTCAAAGAACCTCATCCCCTGGATaGAGGGCTGGTGTGCAGTTCTCTCTGAGACAAGTA +
Preference number: 3 (lower is better)
Translates to: DPSTGQRTSSPG*RAGVQFSLRQV
Trigger: TACTTGTCTCAGAGAGAACTGCACACCAGCCCTGCATCCAGGGGATGAGGTTCTTTGACCTGTAGATGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GGTCAACTGGGGCCCACATTATCCCGCTCAGCTGCCTaGCTAGCTCTTCAAAACTGCGTATCTCAGTCATTT +
Preference number: 3 (lower is better)
Translates to: GQLGPTLSRSAA*LALQNCVSQSF
Trigger: AAATGACTGAGATACGCAGTTTTGAAGAGCTAGGCAGGCAGCTGAGCGGGATAATGTGGGCCCCAGTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp TTAGGACCCATCTACAGGTCAAAGAACCTCATCCCCTaGATGCAGGGCTGGTGTGCAGTTCTCTCTGAGACA +
Preference number: 3 (lower is better)
Translates to: LGPIYRSKNLIP*MQGWCAVLSET
Trigger: TGTCTCAGAGAGAACTGCACACCAGCCCTGCATCCAGGGGATGAGGTTCTTTGACCTGTAGATGGGTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAACAAGCAAAGGCACCTTaGGGGACCCTTTGGGGATCT +
Preference number: 3 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQQAKAP*GTLWGS
Trigger: AGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTTG...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATGGCACTTCCTGCTCTTaGATGAGCCCGCCCAGCTCG +
Preference number: 3 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNGTSCS*MSPPSS
Trigger: CGAGCTGGGCGGGCTCATCAAAGAGCAGGAAGTGCC...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGCAAGCTGGGGGCACTaGCAACCTTCCTTCTTAAGG +
Preference number: 3 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSASWGH*QPSFLR
Trigger: CCTTAAGAAGGAAGGTTGCAAGTGCCCCCAGCTTGC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAACGGGGTTTCCCCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQRGFPM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGGGGAAACCCCG...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACTTGAGCCTTCTCATTaGTGGCATTGTTATATTTCT +
Preference number: 3 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSLEPSH*WHCYIS
Trigger: AGAAATATAACAATGCCACAAATGAGAAGGCTCAAG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCATTTTTGTTGCTGTTGTaGTTGAGCCAAAAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSFLLLL*LSQKKR
Trigger: TCTCTTCTTTTGGCTCAACAACAACAGCAACAAAAA...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGGGACTGCCAAGACTTaGTCAGGCCTGGGTCAACCC +
Preference number: 3 (lower is better)
Translates to: SSSKLRISVISDAHKSTNGTAKT*SGLGQP
Trigger: GGGTTGACCCAGGCCTGACAAAGTCTTGGCAGTCCC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATGGGACTGCCAAGACTTaGTCAGGCCTGGGTCAACCC +
Preference number: 3 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNGTAKT*SGLGQP
Trigger: GGGTTGACCCAGGCCTGACAAAGTCTTGGCAGTCCC...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp TGGATTCTGTACATTGCAGACTCAGCACGTGACCCATaGGCCTGCCTGGCCAATTACCTTAATGAGTGGGGA +
Preference number: 3 (lower is better)
Translates to: WILYIADSARDP*ACLANYLNEWG
Trigger: TCCCCACTCATTAAGGTAATTGGCCAGGCAGGCTCATGGGTCACGTGCTGAGTCTGCAATGTACAGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp GCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTaGGGGCACTTGCAACCTTCCTTCTTAAGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: AVARFTPSSSAS*GHLQPSFLRLF
Trigger: AAAAAGCCTTAAGAAGGAAGGTTGCAAGTGCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp ACCTTTGGGGACCCTTTGGGGATCTTAACATTCTGCTaGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAAA +
Preference number: 3 (lower is better)
Translates to: TFGDPLGILTFC*ERVYLREPSIK
Trigger: TTTGATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp AATGTCTCTCTCAGCAAGTCCTTAACTGCCAACCAGTaGCCACTTTTCTCCCAACTCACAGCTCCCCTAGCA +
Preference number: 3 (lower is better)
Translates to: NVSLSKSLTANQ*PLFSQLTAPLA
Trigger: TGCTAGGGGAGCTGTGAGTTGGGAGAAAAGTGGTCACTGGTTGGCAGTTAAGGACTTGCTGAGAGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp AATTCCTGGTTGAAAAACACAGTAGATGACAGCCACTaGGGTCAACTGGGGCCCACATTATCCCGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: NSWLKNTVDDSH*GQLGPTLSRSA
Trigger: AGCTGAGCGGGATAATGTGGGCCCCAGTTGACCTCAGTGGCTGTCATCTACTGTGTTTTTCAACCAGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp TTATCCCGCTCAGCTGCCTGCCTAGCTCTTCAAAACTaGGTATCTCAGTCATTTCCGATGCCCACAAAAGCA +
Preference number: 3 (lower is better)
Translates to: LSRSAACLALQN*VSQSFPMPTKA
Trigger: TGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCTAGGCAGGCAGCTGAGCGGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTATTTGGGGGATGGTCTaGGACCATCTGGACTTAAGT +
Preference number: 3 (lower is better)
Translates to: PEACAQSHNQLVGQELGFIWGMV*DHLDLS
Trigger: ACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAAT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp GGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTaGGCAATCTACTGTGGGCCAGATACCCCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: GQSKASAHSNIC*AIYCGPDTPER
Trigger: CCTCTCTGGGGTATCTGGCCCACAGTAGATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GCCTGTTTCTCATCTCTGCACAATTCCAGAGGCCTGTaGTCAATCGCACAATCAGCTTGTAGGACAAGAACT +
Preference number: 3 (lower is better)
Translates to: ACFSSLHNSRGL*SIAQSACRTRT
Trigger: AGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAGATGAGAAACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTaGACAATTCCAGAGGCCTGTGCTCAATCGCACAAT +
Preference number: 3 (lower is better)
Translates to: VVALQIQPVSHL*TIPEACAQSHN
Trigger: ATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp AAGACAGAAACTTCTCCCTACAAGCAAAGGCACCTTTaGGGACCCTTTGGGGATCTTAACATTCTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: KTETSPYKQRHL*GPFGDLNILLG
Trigger: TCCCAGCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTTGTAGGGAGAAGTTTCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCGAGGACATGGAGTGCTaGATATTTCACACACAAATC +
Preference number: 3 (lower is better)
Translates to: LGILTFCWERVYLREPSIEDMEC*IFHTQI
Trigger: GATTTGTGTGTGAAATATCAAGCACTCCATGTCCTC...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAATCTGGATTCTGTACATaGCAGACTCAGCACGTGACC +
Preference number: 3 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQSGFCT*QTQHVT
Trigger: GGTCACGTGCTGAGTCTGCAATGTACAGAATCCAGA...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGTCTCAAGGCTCCAGTaGGCCCATTCAGGAACAAAC +
Preference number: 3 (lower is better)
Translates to: SSSKLRISVISDAHKSTNVSRLQ*AHSGTN
Trigger: GTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGAC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTACAAGCAAAGGCACCTTaGGGGACCCTTTGGGGATCT +
Preference number: 3 (lower is better)
Translates to: NLLATDRDSGEGTILNRVQAKAP*GTLWGS
Trigger: AGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTTG...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAATCTAGTAAAGCTCAATaGAAGACAGTCCTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQSSKAQ*KTVLQG
Trigger: ACCCTGGAGGACTGTCTTCAATTGAGCTTTACTAGA...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAGACAAGAACTGGGATTaGCTCCATCCGAGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: NLLATDRDSGEGTILNRVDKNWD*LHPSPG
Trigger: GCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGTC...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAACCTTTGGGGACCCTTaGGGGATCTTAACATTCTGC +
Preference number: 3 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTTFGDP*GILTFC
Trigger: GCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGT...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp GGGATTTGCTCCATCCGAGTCCTGGCCCTTCTGGTATaGACCTACTTATCTTCTTTCTCCTACAAATGTCTC +
Preference number: 3 (lower is better)
Translates to: GICSIRVLALLV*TYLSSFSYKCL
Trigger: GAGACATTTGTAGGAGAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGCAAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp TTCTCCTACAAATGTCTCTCTCAGCAAGTCCTTAACTaGCAACCAGTGACCACTTTTCTCCCAACTCACAGC +
Preference number: 3 (lower is better)
Translates to: FSYKCLSQQVLN*QPVTTFLPTHS
Trigger: GCTGTGAGTTGGGAGAAAAGTGGTCACTGGTTGGCAGTTAAGGACTTGCTGAGAGAGACATTTGTAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp CGGCCCAGCACACAAAGAGGTTTTGAAATCATCTGCTaGAATGGAATCTTGGCTGATAAATACACGTGGCCT +
Preference number: 3 (lower is better)
Translates to: RPSTQRGFEIIC*NGILADKYTWP
Trigger: AGGCCACGTGTATTTATCAGCCAAGATTCCATTGCAGCAGATGATTTCAAAACCTCTTTGTGTGCTGGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GCACGGCCCAGCACACAAAGAGGTTTTGAAATCATCTaGTGCAATGGAATCTTGGCTGATAAATACACGTGG +
Preference number: 3 (lower is better)
Translates to: ARPSTQRGFEII*CNGILADKYTW
Trigger: CCACGTGTATTTATCAGCCAAGATTCCATTGCAGCAGATGATTTCAAAACCTCTTTGTGTGCTGGGCCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp AGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATaGAGAACACATCCACCAACGCTCTCCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: RVNAEVTVQKGT*RTHPPTLSHPL
Trigger: GAGAGGGTGGGAGAGCGTTGGTGGATGTGTTCTGCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp TGCAGGATGCAAGGAAAGGCAAATCCACGATTCTCATaGGATAGTGAAGAAGAGGTAAGCCAGGAGCAAACA +
Preference number: 3 (lower is better)
Translates to: CRMQGKANPRFS*DSEEEVSQEQT
Trigger: TGTTTGCTCCTGGCTTACCTCTTCTTCACTATCCCATGAGAATCGTGGATTTGCCTTTCCTTGCATCCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp GTAGGACAAGAACTGGGATTTGCTCCATCCGAGTCCTaGCCCTTCTGGTATGAACCTACTTATCTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: VGQELGFAPSES*PFWYEPTYLLS
Trigger: AGAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAGAGGACATGGAGTGCTaGATATTTCACACACAAATC +
Preference number: 3 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGEDMEC*IFHTQI
Trigger: GATTTGTGTGTGAAATATCAAGCACTCCATGTCCTC...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTTATCTCCACTGGGATaGCAACAGAACGGCAAACTG +
Preference number: 3 (lower is better)
Translates to: SSSKLRISVISDAHKSTNLSPLG*QQNGKL
Trigger: CAGTTTGCCGTTCTGTTGCAATCCCAGTGGAGATAA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCACCTTTGGGGACCCTTaGGGGATCTTAACATTCTGC +
Preference number: 3 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLTFGDP*GILTFC
Trigger: GCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTGGCATGCTGGAAATTaGGCAAGTGATGTGAACCAC +
Preference number: 3 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNWHAGN*ASDVNH
Trigger: GTGGTTCACATCACTTGCCAAATTTCCAGCATGCCA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATGGCATGCTGGAAATTaGGCAAGTGATGTGAACCAC +
Preference number: 3 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTWHAGN*ASDVNH
Trigger: GTGGTTCACATCACTTGCCAAATTTCCAGCATGCCA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp CTGGGCATAAGCTGTAATGATGGGTACATGACAACCTaGTGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: LGISCNDGYMTT*CCGLANSACFS
Trigger: TGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTCATGTACCCATCATTACAGCTTATGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GTACATCAAATTTCCACCCCCTTCTCAATGTTTCCCTaGTGCTGTGCAGCTCTGCAAGTTTCTGTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: VHQISTPFSMFP*CCAALQVSVFE
Trigger: TTCAAAGACAGAAACTTGCAGAGCTGCACAGCAGCAGGGAAACATTGAGAAGGGGGTGGAAATTTGATGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp GAACTGGGATTTGCTCCATCCGAGTCCTGGCCCTTCTaGTATGAACCTACTTATCTTCTTTCTCCTACAAAT +
Preference number: 3 (lower is better)
Translates to: ELGFAPSESWPF*YEPTYLLSPTN
Trigger: ATTTGTAGGAGAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGCAAATCCCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCATCAGAGCTGATGATTaGGGGGATGGTCTTGGACCA +
Preference number: 3 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCIRADD*GDGLGP
Trigger: TGGTCCAAGACCATCCCCCAAATCATCAGCTCTGAT...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCCCTGATGTTGTGGCCTaGCAAATTCAGCCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLPDVVA*QIQPVS
Trigger: AGAAACAGGCTGAATTTGCAAGGCCACAACATCAGG...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATACACTTTCTCCCAATTaGCTGACACAGGGCTCAATT +
Preference number: 3 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNTLSPN*LTQGSI
Trigger: AATTGAGCCCTGTGTCAGCAAATTGGGAGAAAGTGT...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTGCTGCAATGGAATCTaGGCTGATAAATACACGTGG +
Preference number: 3 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNCCNGI*ADKYTW
Trigger: CCACGTGTATTTATCAGCCAAGATTCCATTGCAGCA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATACCGATAAGCAGCAGTaGGTTCCATTATCTACAGAT +
Preference number: 3 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDTDKQQ*VPLSTD
Trigger: ATCTGTAGATAATGGAACCAACTGCTGCTTATCGGT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGTTTTCCCTCTGAAGTaGGGGAGTCAAAGAGTTTTT +
Preference number: 3 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTVFPLK*GSQRVF
Trigger: AAAAACTCTTTGACTCCCCAACTTCAGAGGGAAAAC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATGTTTTCCCTCTGAAGTaGGGGAGTCAAAGAGTTTTT +
Preference number: 3 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNVFPLK*GSQRVF
Trigger: AAAAACTCTTTGACTCCCCAACTTCAGAGGGAAAAC...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAGCAGCACAGACCACTaGAAATCTCTTTTCAGAACA +
Preference number: 3 (lower is better)
Translates to: NLLATDRDSGEGTILNRVSSTDH*KSLFRT
Trigger: TGTTCTGAAAAGAGATTTCAAGTGGTCTGTGCTGCT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp AAACCAAGGTTAGGACAGGAAAATATCCTCTTTCCCTaGGTTAGCAACTTAGAACCACGAGTACTTCACTTA +
Preference number: 3 (lower is better)
Translates to: KPRLGQENILFP*VSNLEPRVLHL
Trigger: TAAGTGAAGTACTCGTGGTTCTAAGTTGCTAACCCAGGGAAAGAGGATATTTTCCTGTCCTAACCTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAATGTATTTAAACAACTaGAGCCTTCTCATTTGTGGC +
Preference number: 3 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTMYLNN*SLLICG
Trigger: GCCACAAATGAGAAGGCTCAAGTTGTTTAAATACAT...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR-3UTR CAA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAGTCAGTACTTTCCTTaGAGTGTTTCAGTGAGTTTA +
Preference number: 3 (lower is better)
Translates to: NLLATDRDSGEGTILNRVSQYFP*SVSVSL
Trigger: TAAACTCACTGAAACACTCAAAGGAAAGTACTGACT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR GCA 72 bp GGACTTAAGTCACACTCTCTAGAGGAGGACATGGAGTaGTTGATATTTCACACACAAATCTTACATCTTCTA +
Preference number: 3 (lower is better)
Translates to: GLKSHSLEEDME*LIFHTQILHLL
Trigger: TAGAAGATGTAAGATTTGTGTGTGAAATATCAAGCACTCCATGTCCTCCTCTAGAGAGTGTGACTTAAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CCA 72 bp TTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTaGTTCCATTATCTACAGATTATTTCTTCCCAAAAG +
Preference number: 3 (lower is better)
Translates to: FLEHGILPISSS*FHYLQIISSQK
Trigger: CTTTTGGGAAGAAATAATCTGTAGATAATGGAACCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp AAGAAGAGAATCTGTGAAATTAAATCTCCAGGCCTCTaGAAAGGATCCAGATCAAGTCAGTACTTTCCTTTG +
Preference number: 3 (lower is better)
Translates to: KKRICEIKSPGL*KGSRSSQYFPL
Trigger: CAAAGGAAAGTACTGACTTGATCTGGATCCTTTTCAGAGGCCTGGAGATTTAATTTCACAGATTCTCTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR TCA 72 bp CCAGAAACCTGTTTCTCCCAAGAACATGTCAATCACTaGAGTGACTGTATTTTCTCAATTAGGAATTCAGAC +
Preference number: 3 (lower is better)
Translates to: PETCFSQEHVNH*SDCIFSIRNSD
Trigger: GTCTGAATTCCTAATTGAGAAAATACAGTCACTTCAGTGATTGACATGTTCTTGGGAGAAACAGGTTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAGTCGCGGTCCTCGATaGCTCGCTGGGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSRGPR*LAGAWM
Trigger: CATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAGGGAAGGGGGTCGTCTaGGCAGAGGAACTGACCACC +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSGKGVV*AEELTT
Trigger: GGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCC...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCTGCGGGGCACTGATCTaGGGGACGACAGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSCGALI*GTTGLS
Trigger: GCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCA...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCACCAGGCTCGTGGCTaGGGAGCTGAGCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSHQARG*GAEHSV
Trigger: GACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTGGATTGCGGGGCACTaGTCTGGGGGACGACAGGGC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMWIAGH*SGGRQG
Trigger: GCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCTCGCTGGGGCCTGGATaGCGAGGATGGACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSLGPG*RGWTCP
Trigger: GGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGA...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAAGTCGCGGTCCTCGATaGCTCGCTGGGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSSRGPR*LAGAWM
Trigger: CATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACT...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTGCAGACTCAGCACGTaGCCCATGAGCCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNCRLST*PMSLPG
Trigger: GCCAGGCAGGCTCATGGGTCACGTGCTGAGTCTGCA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAGCACTTCCACGCTGCTaGGGTTCTTCAGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSALPRC*GSSGHP
Trigger: CGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGC...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAATGCGGGGCACTGATCTaGGGGACGACAGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRECGALI*GTTGLS
Trigger: GCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCA...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACTGATCCAGAGGATGTaGGGAGGAGCCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSLIQRM*GGAWHR
Trigger: CCTGTGCCAGGCTCCTCCCCACATCCTCTGGATCAG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCTCGTGGCTGAGGAGCTaGGCACTCTGTCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSWLRS*ALCPED
Trigger: GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGA...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTCGCTGGGGCCTGGATaGCGAGGATGGACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSLGPG*RGWTCP
Trigger: GGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAGTAGATGACAGCCACTaGGGTCAACTGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSVDDSH*GQLGPT
Trigger: TGTGGGCCCCAGTTGACCTCAGTGGCTGTCATCTAC...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCCACCCCAAACTGCCTaGATTGAGGGATGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSPPQTA*IEGWGW
Trigger: CCACCCCCATCCCTCAATTCAGGCAGTTTGGGGTGG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR CCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGCTACATGGACAGCATaGCAGCGCAGCCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSATWTA*QRSRSM
Trigger: CATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACCTCCCTTGGGTCCGTaGACTCAAACTTCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSPPLGP*TQTSGC
Trigger: ACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGCACCAGCCTCGCATTaGTGTCCCCAGACGTTCGGT +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSAPASH*CPQTFG
Trigger: ACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGCGGAGGACAGGAGCTaGGTCTGCATCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAAEDRS*VCILAP
Trigger: TGGGGCCAGGATGCAGACCCAGCTCCTGTCCTCCGC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGGCGGAGGACAGGAGCTaGGTCTGCATCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWAEDRS*VCILAP
Trigger: TGGGGCCAGGATGCAGACCCAGCTCCTGTCCTCCGC...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAGACTTTGTCAGGCCTaGGTCAACCCGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNRLCQA*VNPPAQ
Trigger: CTGGGCTGGCGGGTTGACCCAGGCCTGACAAAGTCT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCACGCCAAGGCCTGCCTaGCAAACTCCATGCGCACTT +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSTPRPA*QTPCAL
Trigger: AAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACACCAGGCTCGTGGCTaGGGAGCTGAGCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAHQARG*GAEHSV
Trigger: GACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTGGATTGCGGGGCACTaGTCTGGGGGACGACAGGGC +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPWIAGH*SGGRQG
Trigger: GCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCA...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGAGTCGCGGTCCTCGATaGCTCGCTGGGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPSRGPR*LAGAWM
Trigger: CATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGTGGGCCCATGTGCCTaGTGTACTGACAGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMVGPCA*CTDSVP
Trigger: CGGCACACTGTCAGTACATCAGGCACATGGGCCCAC...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR TCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCCTAGGCACGTGGAGCTaGTCCAGAGGATGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGLGTWS*SRGCGE
Trigger: CTCCCCACATCCTCTGGATCAGCTCCACGTGCCTAG...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCCCCTCTGGGATCACTaGCTCCCCACTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSPLWDH*LPTSCS
Trigger: TGAACAGGAAGTGGGGAGTCAGTGATCCCAGAGGGG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAGGCGCTCTCCCGCCTaGTGGATCTCCTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNRRSPA*WISCKF
Trigger: GAACTTACAGGAGATCCAGCAGGCGGGAGAGCGCCT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAGGTACGCCAAGGCCTaGCTGACAAACTCCATGCGC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSRYAKA*LTNSMR
Trigger: GCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAGCAGAGCAGACCACTaGCCACTGTCTCAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSRADH*PLSQGS
Trigger: GGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAATAAGCTCGGCTCACTaGAACCTCCGCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSISSAH*NLRLLG
Trigger: ACCCAAGAGGCGGAGGTTGCAGTGAGCCGAGCTTAT...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGCAGAGCTGGGTTTCTaGCAGCACCCCGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSAELGF*QHPVPF
Trigger: AAAAGGGACGGGGTGCTGGCAGAAACCCAGCTCTGC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCATCCCGCTCAGCTGCCTaGCTAGCTCTTCAAAACTGC +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSSRSAA*LALQNC
Trigger: GCAGTTTTGAAGAGCTAGGCAGGCAGCTGAGCGGGA...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAAAGCGCCCACACAGGATaGCCTTCCACCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRESAHTG*PSTSPS
Trigger: GGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCT...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAAGCTACATGGACAGCATaGCAGCGCAGCCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREATWTA*QRSRSM
Trigger: CATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGC...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCCTCCCTTGGGTCCGTaGACTCAAACTTCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSPPLGP*TQTSGC
Trigger: ACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACTGCTTCTGGAACTGTaGGAGAGTGAGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSLLLEL*ESEPVL
Trigger: CAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCATCTTCCACACTTTCCTaGTTCAGGGGCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSSSTLS*FRGTSF
Trigger: GAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGA...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTGCCTGATGTACTaGCAGTGTGCCGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSMCLMY*QCADPD
Trigger: GTCTGGGTCGGCACACTGTCAGTACATCAGGCACAT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGTGGGCCCATGTGCCTaGTGTACTGACAGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAVGPCA*CTDSVP
Trigger: CGGCACACTGTCAGTACATCAGGCACATGGGCCCAC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR GCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAGGTACTCCTCAGCCATaGCGAAGGTCCTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRGTPQP*RRSSSG
Trigger: CCCGGAAGAGGACCTTCGGCATGGCTGAGGAGTACC...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGGTACTCCTCAGCCATaGCGAAGGTCCTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAGTPQP*RRSSSG
Trigger: CCCGGAAGAGGACCTTCGGCATGGCTGAGGAGTACC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCTTCAGGGCATCCGTTaGCGGTGTCAACAACACGTC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSLQGIR*RCQQHV
Trigger: GACGTGTTGTTGACACCGGCAACGGATGCCCTGAAG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGGCACTTCCACGCTGCTaGGGTTCTTCAGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWALPRC*GSSGHP
Trigger: CGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGC...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGCACTTCCACGCTGCTaGGGTTCTTCAGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAALPRC*GSSGHP
Trigger: CGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTGCGCACTTCCACGCTaGTGCGGTTCTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMCALPR*CGSSGH
Trigger: ATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAGCGCAGCCGCTCCATaGGGAAAAGAAAGGCAACTG +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSAAAP*GKERQL
Trigger: CAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTCTCCTTGTTGGATTaGGGGGCACTGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLSLLD*GALIWG
Trigger: CCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCTACCCCTTCCTCAAGTaGAAGCTGGGGGCACTTGCA +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSYPFLK*KLGALA
Trigger: TGCAAGTGCCCCCAGCTTGCACTTGAGGAAGGGGTA...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGCAGCTACAGAGGAGTaGAGTGGCAAGGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNAATEE*SGKVYP
Trigger: GGGGTAAACCTTGCCACTGCACTCCTCTGTAGCTGC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTCAAGCGAACTGCCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLKRTA*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGGCAGTTCGCTTGAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAAGCGCCCACACAGGATaGCCTTCCACCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASAHTG*PSTSPS
Trigger: GGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGAGTGAGCCTGTCTTGTaGGGAGCTGGTGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSEPVL*GAGAIV
Trigger: GACGATGGCACCAGCTCCCCACAAGACAGGCTCACT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGAGCACCAGTGCTACATaGACAGCATGGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSTSAT*TAWQRS
Trigger: GCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCTGCGGGGCACTGATCTaGGGGACGACAGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSICGALI*GTTGLS
Trigger: GCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCA...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGCACCAGCCTCGCATTaGTGTCCCCAGACGTTCGGT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAAPASH*CPQTFG
Trigger: ACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR CCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCTCCTCAAGTGCAAGCTaGGGGCACTTGCAACCTTCC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSSSAS*GHLQPS
Trigger: GGAAGGTTGCAAGTGCCCCCAGCTTGCACTTGAGGA...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCCCTGGATGCAGGGCTaGTGTGCAGTTCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMPWMQG*CAVLSE
Trigger: CTCAGAGAGAACTGCACACCAGCCCTGCATCCAGGG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGACTGATCCAGAGGATGTaGGGAGGAGCCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRLIQRM*GGAWHR
Trigger: CCTGTGCCAGGCTCCTCCCCACATCCTCTGGATCAG...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCGCCACTGAGGTCAACTaGGGCCCACATTATCCCGCT +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGATEVN*GPHYPA
Trigger: AGCGGGATAATGTGGGCCCCAGTTGACCTCAGTGGC...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAAAGGGCGTCTTCTCCTaGTGCCAGCAGTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAKGVFS*CQQCVQ
Trigger: CTGCACACACTGCTGGCATCAGGAGAAGACGCCCTT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGGGTCCCACATCACTaGTGTAGCTTGGCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSGVPHH*CSLARF
Trigger: AAAGCGAGCCAAGCTACATCAGTGATGTGGGACCCC...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGACGCCAAGGCCTGCCTaGCAAACTCCATGCGCACTT +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWTPRPA*QTPCAL
Trigger: AAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCGTCACATCTGCCAATaGTACAGTACACGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMRHICQ*YSTRPA
Trigger: AGCGGGCCGTGTACTGTATCATTGGCAGATGTGACG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAGGAACTGTGAGAGAGTaGGCCTGTCTTGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRGTVRE*ACLVGS
Trigger: GCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCC...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGGAACTGTGAGAGAGTaGGCCTGTCTTGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAGTVRE*ACLVGS
Trigger: GCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATCCGGGTGTACAGCATaGGGAGCCGCACGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASGCTA*GAARSS
Trigger: TGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCTCTTCCACACTTTCCTaGTTCAGGGGCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSSTLS*FRGTSF
Trigger: GAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGA...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGATCAGCACGTGACCCATaGGCCTGCCTGGCCAATTAC +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRSARDP*ACLANY
Trigger: GTAATTGGCCAGGCAGGCTCATGGGTCACGTGCTGA...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGAGAACACAGCTCCACTaGCCCTCAGGCCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWRTQLH*PSGRIL
Trigger: AAGGATGCGGCCTGAGGGTCAGTGGAGCTGTGTTCT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCCTAGGCCAGGTCTGCTaGGGCCACCAAAGCATATGT +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGLGQVC*GHQSIC
Trigger: ACATATGCTTTGGTGGCCTCAGCAGACCTGGCCTAG...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGAGATGCAGATCCTTGTaGTACAGCCGTCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWRCRSL*YSRLRR
Trigger: GCGGCGGAGACGGCTGTAGCACAAGGATCTGCATCT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACTTATCATCGAGCTCTaGGACGGAAGCACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSLIIEL*DGSTKV
Trigger: GACCTTTGTGCTTCCGTCGCAGAGCTCGATGATAAG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTTCAGGGCATCCGTTaGCGGTGTCAACAACACGTC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLQGIR*RCQQHV
Trigger: GACGTGTTGTTGACACCGGCAACGGATGCCCTGAAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAACTCTCCCAGCTGGTaGTGGGCTCGATTAACTACC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSNSPSW*WARLTT
Trigger: GGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCTTGTGGGGAGCTGGTaGCATCGTCGTCAAAACACA +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSLVGSW*HRRQNT
Trigger: TGTGTTTTGACGACGATGGCACCAGCTCCCCACAAG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTCTCCTTGTTGGATTaGGGGGCACTGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMALSLLD*GALIWG
Trigger: CCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGATGTACTGACAGTGTaGCGACCCAGACTCCCACAA +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSDVLTV*RPRLPQ
Trigger: TTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGATCTCAGATCACTaGAACCTTCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSMISDH*NLRLPG
Trigger: ACCCGGGAGGCGAAGGTTGCAGTGATCTGAGATCAT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAACCTCATCCCCTGGATaGAGGGCTGGTGTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMATSSPG*RAGVQF
Trigger: GAACTGCACACCAGCCCTGCATCCAGGGGATGAGGT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCCATAAAGCCCCTGGGTaGCACCTGAAAGCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGHKAPG*HLKACL
Trigger: TAGGCAGGCTTTCAGGTGGCACCCAGGGGCTTTATG...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTTAAAAAGGGTGCACTaGAGCCCCCGGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLKRVH*SPRSTA
Trigger: TGCTGTGCTCCGGGGGCTGCAGTGCACCCTTTTTAA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTCCGGGACTCTTCGATaGCAGACAGCAGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSGTLR*QTAGHC
Trigger: ACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGACTGGAGGGCCTCCCTTaGGTCCGTGGACTCAAACTT +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRLEGLP*VRGLKL
Trigger: AAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAG...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTGGAGGGCCTCCCTTaGGTCCGTGGACTCAAACTT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMALEGLP*VRGLKL
Trigger: AAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCTCCTCAAGTGCAAGCTaGGGGCACTTGCAACCTTCC +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGSSSAS*GHLQPS
Trigger: GGAAGGTTGCAAGTGCCCCCAGCTTGCACTTGAGGA...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACCCTGGATGCAGGGCTaGTGTGCAGTTCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAPWMQG*CAVLSE
Trigger: CTCAGAGAGAACTGCACACCAGCCCTGCATCCAGGG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGCTCCATCCGAGTCCTaGCCCTTCTGGTATGAACCT +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSAPSES*PFWYEP
Trigger: AGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGC...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCTGAGCAATCTACTGTaGGCCAGATACCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSLSNLL*ARYPRE
Trigger: CTCTCTGGGGTATCTGGCCCACAGTAGATTGCTCAG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCGGAGAACTGACGCCTTaGCATCTGCCGTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSIGELTP*HLPSPG
Trigger: CCCAGGAGACGGCAGATGTCAAGGCGTCAGTTCTCC...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGGGGTCCCACATCACTaGTGTAGCTTGGCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAGVPHH*CSLARF
Trigger: AAAGCGAGCCAAGCTACATCAGTGATGTGGGACCCC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACCGCCCAGCTGGGCCTaGTGCAAATTTCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAPPSWA*CKFPKT
Trigger: TGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTCGATTAACTACCTGTaGAGCGGCAAGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSINYL*SGKQVS
Trigger: GGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCATCGATTAACTACCTGTaGAGCGGCAAGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSSINYL*SGKQVS
Trigger: GGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGA...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCCTGCTTCTGGAACTGTaGGAGAGTGAGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGLLLEL*ESEPVL
Trigger: CAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAG...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTTTGCGCTTATTCCTTaGGCCCTATACCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNFALIP*ALYRSA
Trigger: TGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCTTTGCGCTTATTCCTTaGGCCCTATACCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSFALIP*ALYRSA
Trigger: TGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAA...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGATGTGCCTGATGTACTaGCAGTGTGCCGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWMCLMY*QCADPD
Trigger: GTCTGGGTCGGCACACTGTCAGTACATCAGGCACAT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAATGTGCCTGATGTACTaGCAGTGTGCCGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAMCLMY*QCADPD
Trigger: GTCTGGGTCGGCACACTGTCAGTACATCAGGCACAT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGATGACCACACCCTGTaGCAAGACAGAAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNDDHTL*QDRNFS
Trigger: GGAGAAGTTTCTGTCTTGTCACAGGGTGTGGTCATC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAGACAGTCCTCCAGGGTaGCAAGATGGGACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRDSPPG*QDGTRG
Trigger: TCCTCTAGTCCCATCTTGTCACCCTGGAGGACTGTC...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCACTGGTCTTGAACTCCTaGTCTCAGGTGATCACCTGC +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSLVLNS*SQVITC
Trigger: GCAGGTGATCACCTGAGATCAGGAGTTCAAGACCAG...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTTGAAGGAACAGCCCTaGGTCTCATTTGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNLKEQP*VSFDPG
Trigger: CCCAGGATCAAATGAGACTCAGGGCTGTTCCTTCAA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCTTATCATCGAGCTCTaGGACGGAAGCACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNLIIEL*DGSTKV
Trigger: GACCTTTGTGCTTCCGTCGCAGAGCTCGATGATAAG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGGTCTCCACAGCGCATaGAGTAGTAAATTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMGLHSA*SSKLAP
Trigger: GGGCGCTAATTTACTACTGCATGCGCTGTGGAGACC...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGAACTCTCCCAGCTGGTaGTGGGCTCGATTAACTACC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMNSPSW*WARLTT
Trigger: GGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAACTTGTGGGGAGCTGGTaGCATCGTCGTCAAAACACA +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRELVGSW*HRRQNT
Trigger: TGTGTTTTGACGACGATGGCACCAGCTCCCCACAAG...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCACTGCTGCTTCAAACTaGGCTGTCAGGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSTAASN*AVRNRT
Trigger: AGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAATGATCTCAGATCACTaGAACCTTCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSMISDH*NLRLPG
Trigger: ACCCGGGAGGCGAAGGTTGCAGTGATCTGAGATCAT...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAAATTCCAGAGGCCTGTaGTCAATCGCACAATCAGCT +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSNSRGL*SIAQSA
Trigger: AGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATT...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGAAAAAGGAAGGCATCTaGCGTGGCAGAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMKKEGI*RGRAHQ
Trigger: CTGGTGAGCTCTGCCACGGCAGATGCCTTCCTTTTT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCATCAATGTTTCCCTGCTaGTGTGCAGCTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSSMFPC*CAALQV
Trigger: AACTTGCAGAGCTGCACAGCAGCAGGGAAACATTGA...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCCCCTCAGTATCCATTaGAGATGCAGATCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNPLSIH*RCRSLC
Trigger: GCACAAGGATCTGCATCTCCAATGGATACTGAGGGG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGTCCGGGACTCTTCGATaGCAGACAGCAGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWSGTLR*QTAGHC
Trigger: ACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGA...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGAACATTGACTCCCGATaGTACTCCTCAGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMNIDSR*YSSAMP
Trigger: CGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTCCGCCACTTCACTCTaGTTGTCGGTGACGTCACAT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSATSL*LSVTSH
Trigger: ATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCTGTCTTGTGGGGAGCTaGTGCCATCGTCGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGCLVGS*CHRRQN
Trigger: GTTTTGACGACGATGGCACCAGCTCCCCACAAGACA...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTGTCTTGTGGGGAGCTaGTGCCATCGTCGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMCLVGS*CHRRQN
Trigger: GTTTTGACGACGATGGCACCAGCTCCCCACAAGACA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCGCAGTCAACTCACAGTaGAGCAGCTACAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGAVNSQ*SSYRGV
Trigger: CACTCCTCTGTAGCTGCTCCACTGTGAGTTGACTGC...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAAGGCCGCATCCTTCCTaGAACATGGAATCCTACCGA +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSRPHPS*NMESYR
Trigger: TCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCT...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGTGCTAGCGCAGAGCTaGGTTTCTGCCAGCACCCCG +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQVLAQS*VSASTP
Trigger: CGGGGTGCTGGCAGAAACCCAGCTCTGCGCTAGCAC...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCGCTCAGGTGCCGGCTTaGGGACGCGGCCGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCAQVPA*GRGRRF
Trigger: GAAGCGGCGGCCGCGTCCTCAAGCCGGCACCTGAGC...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTTGGCTCGCTTTCTTaGGTAAAGTCAAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLGSLS*VKSRAS
Trigger: AGACGCCCTTGACTTTACTCAAGAAAGCGAGCCAAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATCGATTAACTACCTGTaGAGCGGCAAGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASINYL*SGKQVS
Trigger: GGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTGCTTCTGGAACTGTaGGAGAGTGAGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMALLLEL*ESEPVL
Trigger: CAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCTTTGCGCTTATTCCTTaGGCCCTATACCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGFALIP*ALYRSA
Trigger: TGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAA...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATCTTCCACACTTTCCTaGTTCAGGGGCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASSTLS*FRGTSF
Trigger: GAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGGCAAGAAGCACTTCTaGGAGGTTGTGCCTGATTTC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMGKKHF*EVVPDF
Trigger: GAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCC...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTTAATTCATaGGGACCTCCATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSMALNS*GPPSAP
Trigger: TGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCAT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR TCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGTGGGCCCATGTGCCTaGTGTACTGACAGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQVGPCA*CTDSVP
Trigger: CGGCACACTGTCAGTACATCAGGCACATGGGCCCAC...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGGGGAAGGGGGTCGTCTaGGCAGAGGAACTGACCACC +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEGKGVV*AEELTT
Trigger: GGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCC...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAAAGAGCAAATGATGGGTaGCAACTACTGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRERANDG*QLLLRE
Trigger: CTCCCTGAGCAGTAGTTGTCACCCATCATTTGCTCT...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATGGAGTGCAGTGGCATaGTCTCAGATCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAWSAVA*SQITAT
Trigger: GGTTGCAGTGATCTGAGATCATGCCACTGCACTCCA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGCTCAAGTCACTTCCTaGGTGGCATGCTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNAQVTS*VACWKF
Trigger: AAATTTCCAGCATGCCACTCAGGAAGTGACTTGAGC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAAAATTCCTTTCCCAGCTaGCTGAGGCTAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRENSFPS*LRLRES
Trigger: ACTCTCCCTTAGCCTCAGTCAGCTGGGAAAGGAATT...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCCTGTCCCTGCCCTGTaGGGGATACCAATATATTAT +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNPVPAL*GIPIYY
Trigger: ATAATATATTGGTATCCCTCACAGGGCAGGGACAGG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCCACCTTCTTTCAGACTaGATGCCTATTAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGHLLSD*MPIKGP
Trigger: GGGGCCCTTAATAGGCATTCAGTCTGAAAGAAGGTG...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAACACCTTCTTTCAGACTaGATGCCTATTAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREHLLSD*MPIKGP
Trigger: GGGGCCCTTAATAGGCATTCAGTCTGAAAGAAGGTG...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGCCCTGAGTCTCATTTaGTCCTGGGAGACATTATTC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNALSLI*SWETLF
Trigger: GAATAATGTCTCCCAGGATCAAATGAGACTCAGGGC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATCTCCGCCGCTCAGGTaGCGGCTTGAGGACGCGGCC +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVSPPLR*RLEDAA
Trigger: GGCCGCGTCCTCAAGCCGGCACCTGAGCGGCGGAGA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTTATCATCGAGCTCTaGGACGGAAGCACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLIIEL*DGSTKV
Trigger: GACCTTTGTGCTTCCGTCGCAGAGCTCGATGATAAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCTGCGCACTTCCACGCTaGTGCGGTTCTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSICALPR*CGSSGH
Trigger: ATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCA...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAGGTACGCCAAGGCCTaGCTGACAAACTCCATGCGC +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSIRYAKA*LTNSMR
Trigger: GCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGGTCTCCACAGCGCATaGAGTAGTAAATTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAGLHSA*SSKLAP
Trigger: GGGCGCTAATTTACTACTGCATGCGCTGTGGAGACC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAAAGGTCATACAGCTTTaGTGCCTCTTCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSKVIQL*CLFKQS
Trigger: GGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTT...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGATGTACTGACAGTGTaGCGACCCAGACTCCCACAA +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMADVLTV*RPRLPQ
Trigger: TTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR GCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCGCAGAGCTGGGTTTCTaGCAGCACCCCGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSIAELGF*QHPVPF
Trigger: AAAAGGGACGGGGTGCTGGCAGAAACCCAGCTCTGC...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACATTATCCCGCTCAGCTaGCTGCCTAGCTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNIIPLS*LPSSSK
Trigger: TTTTGAAGAGCTAGGCAGGCAGCTGAGCGGGATAAT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTCTGTCGGAACCAGTaGTCAAGTTTTTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMALCRNQ*SSFSHP
Trigger: GGGGTGGGAAAAACTTGAGCACTGGTTCCGACAGAG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAAACATTGACTCCCGATaGTACTCCTCAGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMANIDSR*YSSAMP
Trigger: CGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTCCAGGCAAGGGAGCTaGCAGTTTAATGTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNSRQGS*QFNVQE
Trigger: TTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATCTCCCAGCTGGTGCTaGGCTCGATTAACTACCTGT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASPSWC*ARLTTC
Trigger: ACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAATACAGAGGAGTGCAGTaGCAAGGTTTACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREYRGVQ*QGLPLP
Trigger: AGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGAGCTTCCTGTGTAGCTaGGATTACAGGTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWSFLCS*DYRCLP
Trigger: TGGCAGGCACCTGTAATCCCAGCTACACAGGAAGCT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCAGTTCGCAGTCAGTGTaGGGACTGCCAAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGSSQSV*GLPRLC
Trigger: ACAAAGTCTTGGCAGTCCCCACACTGACTGCGAACT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAAAGGGCGTCTTCTCCTaGTGCCAGCAGTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQKGVFS*CQQCVQ
Trigger: CTGCACACACTGCTGGCATCAGGAGAAGACGCCCTT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGATCTGTATTGTTCCTaGGGGCCCTACGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMADLYCS*GPYGNA
Trigger: TGCATTACCGTAGGGCCCTCAGGAACAATACAGATC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR TCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCCGTCACATCTGCCAATaGTACAGTACACGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSIRHICQ*YSTRPA
Trigger: AGCGGGCCGTGTACTGTATCATTGGCAGATGTGACG...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAGGCAAGAAGCACTTCTaGGAGGTTGTGCCTGATTTC +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRGKKHF*EVVPDF
Trigger: GAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCC...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGATGGCACTTAATTCATaGGGACCTCCATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMMALNS*GPPSAP
Trigger: TGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCAT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTAGTAAAGCTCAATTaGAGACAGTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLVKLN*RQSSRV
Trigger: CACCCTGGAGGACTGTCTTCAATTGAGCTTTACTAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCTGGCCCTTCTGGTATaGACCTACTTATCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNLALLV*TYLSSF
Trigger: GAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAACTTCAGTTTTCCCTCTaGAGTTGGGGAGTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRELQFSL*SWGVKE
Trigger: CTCTTTGACTCCCCAACTTCAGAGGGAAAACTGAAG...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGATTGAAGGAACAGCCCTaGGTCTCATTTGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRLKEQP*VSFDPG
Trigger: CCCAGGATCAAATGAGACTCAGGGCTGTTCCTTCAA...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGACAAGGCGTGGATAATTaGGTCATCTCCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRQGVDN*VISHTG
Trigger: CCCTGTATGGGAGATGACTCAATTATCCACGCCTTG...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAGTCAGCCATCAGTTTaGAAGCACAAACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSQPSV*KHKLMG
Trigger: TCCCATCAGTTTGTGCTTTCAAACTGATGGCTGACT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCCTTCTTATATGAGATaGGCTCTGTCGGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMPSYMR*ALSEPV
Trigger: CACTGGTTCCGACAGAGCTCATCTCATATAAGAAGG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAATCAGAGTGCGGGCTTaGCTTCGGAGTTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAIRVRA*LRSCSS
Trigger: TGATGAACAACTCCGAAGTCAAGCCCGCACTCTGAT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569322.1
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGATGCCAGCAGTGTGTaGAGAATTCGCTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMDASSV*RIRCFT
Trigger: AGTGAAACAGCGAATTCTGCACACACTGCTGGCATC...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAACTGCTGCTTCAAACTaGGCTGTCAGGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMATAASN*AVRNRT
Trigger: AGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGAAAAGAAAGGCAACTaGTGCTTCAAACTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNEKKGN*CFKLRC
Trigger: ACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAGTCATACAGCTTTGCTaGCTCTTCAAACAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSVIQLC*LFKQSF
Trigger: AAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGAC...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAAGGTCATACAGCTTTaGTGCCTCTTCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSKVIQL*CLFKQS
Trigger: GGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTCTCTCCTTGTTGGATTaGGGGGCACTGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFLSLLD*GALIWG
Trigger: CCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAG...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAATGGGTGACAACTACTaGTCAGGGAGCAAACACCCA +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRMGDNY*SGSKHP
Trigger: TGGGTGTTTGCTCCCTGAGCAGTAGTTGTCACCCAT...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTGGGATTACAGGCGCCTaGCACCATGCCCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFGITGA*HHAQLI
Trigger: AATCAGCTGGGCATGGTGGCAGGCGCCTGTAATCCC...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAACCTCATCCCCTGGATaGAGGGCTGGTGTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQTSSPG*RAGVQF
Trigger: GAACTGCACACCAGCCCTGCATCCAGGGGATGAGGT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCAGCAAGTCCTTAACTaGCAACCAGTGACCACTTTT +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNQQVLN*QPVTTF
Trigger: AAAAGTGGTCACTGGTTGGCAGTTAAGGACTTGCTG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCCTGTTTCTCATCTCTaGACAATTCCAGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMPVSHL*TIPEAC
Trigger: ACAGGCCTCTGGAATTGTGCAGAGATGAGAAACAGG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCATTTTTGGTCAGCAAATaGTGGACACTGCGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSFLVSK*WTLRKS
Trigger: ACTTTTCCGCAGTGTCCAGCATTTGCTGACCAAAAA...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGAGTCAGTGTGGGGACTaGCAAGACTTTGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPSQCGD*QDFVRP
Trigger: AGGCCTGACAAAGTCTTGGCAGTCCCCACACTGACT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCTTCTTTCAGACTGAATaGCTATTAAGGGCCCCCACG +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGFFQTE*LLRAPT
Trigger: CGTGGGGGCCCTTAATAGGCATTCAGTCTGAAAGAA...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATTACAGAACGGTCGATaGTGTCGATCACTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMALQNGR*CRSLQL
Trigger: GAGCTGCAGTGATCGACAGCATCGACCGTTCTGTAA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAACGCTCTCCCGCCTGCTaGATCTCCTGTAAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQRSPAC*ISCKFR
Trigger: ACGGAACTTACAGGAGATCCAGCAGGCGGGAGAGCG...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTCCAGGCAAGGGAGCTaGCAGTTTAATGTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSRQGS*QFNVQE
Trigger: TTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCTCCCAGCTGGTGCTaGGCTCGATTAACTACCTGT +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPSPSWC*ARLTTC
Trigger: ACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGA...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTTAAACTCTCCCAGCTaGTGCTGGGCTCGATTAACT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLNSPS*CWARLT
Trigger: AGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGCTACATGGACAGCATaGCAGCGCAGCCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSATWTA*QRSRSM
Trigger: CATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAACTGGAGGGCCTCCCTTaGGTCCGTGGACTCAAACTT +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQLEGLP*VRGLKL
Trigger: AAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAG...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCACCCAGACGTTCGGTATaGTATCATTCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSPRRSV*YHSSKG
Trigger: ACCTTTGCTGGAATGATACCATACCGAACGTCTGGG...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCCCAGACGTTCGGTATaGTATCATTCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMPRRSV*YHSSKG
Trigger: ACCTTTGCTGGAATGATACCATACCGAACGTCTGGG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR CCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGACTCCCACAAAGCATaGCACTTAATTCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSDSHKA*HLIHED
Trigger: GTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGACCCATGAGCCTGCCTaGCCAATTACCTTAATGAGT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMTHEPA*PITLMS
Trigger: ACTCATTAAGGTAATTGGCCAGGCAGGCTCATGGGT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGAGGCCGCATCCTTCCTaGAACATGGAATCCTACCGA +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPRPHPS*NMESYR
Trigger: TCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGCAGGCTGGAGTGCAGTaGCATGATCTCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPQAGVQ*HDLRSL
Trigger: CAGTGATCTGAGATCATGCCACTGCACTCCAGCCTG...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGGAAGGCATCTGCCGTaGCAGAGCTCACCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQGRHLP*QSSPVS
Trigger: CGAAACTGGTGAGCTCTGCCACGGCAGATGCCTTCC...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTAGACTTTGTCAGGCCTaGGTCAACCCGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSRLCQA*VNPPAQ
Trigger: CTGGGCTGGCGGGTTGACCCAGGCCTGACAAAGTCT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAAGTTCGCAGTCAGTGTaGGGACTGCCAAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASSQSV*GLPRLC
Trigger: ACAAAGTCTTGGCAGTCCCCACACTGACTGCGAACT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGAAGATGGTGGAAGATaGGAAGACTTGTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSEDGGR*EDLWIQ
Trigger: CTGAATCCACAAGTCTTCCCATCTTCCACCATCTTC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGCTGCAATGGAATCTTaGCTGATAAATACACGTGGC +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNAAMES*LINTRG
Trigger: GCCACGTGTATTTATCAGCCAAGATTCCATTGCAGC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAGTGCTAGCGCAGAGCTaGGTTTCTGCCAGCACCCCG +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQVLAQS*VSASTP
Trigger: CGGGGTGCTGGCAGAAACCCAGCTCTGCGCTAGCAC...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGCCACTGAGGTCAACTaGGGCCCACATTATCCCGCT +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQATEVN*GPHYPA
Trigger: AGCGGGATAATGTGGGCCCCAGTTGACCTCAGTGGC...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTCACATGGGGAAGCTCTaGGATGCCCTCAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSHMGKL*DALSLS
Trigger: GCTGAGACTGAGGGCATCTCAGAGCTTCCCCATGTG...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR TCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGGGAACTGTGAGAGAGTaGGCCTGTCTTGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEGTVRE*ACLVGS
Trigger: GCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCC...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTCGCTGGGGCCTGGATaGCGAGGATGGACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNSLGPG*RGWTCP
Trigger: GGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGTCAGCACGTGACCCATaGGCCTGCCTGGCCAATTAC +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLESARDP*ACLANY
Trigger: GTAATTGGCCAGGCAGGCTCATGGGTCACGTGCTGA...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATGCAGACTCAGCACGTaGCCCATGAGCCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTCRLST*PMSLPG
Trigger: GCCAGGCAGGCTCATGGGTCACGTGCTGAGTCTGCA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGGATGACCACACCCTGTaGCAAGACAGAAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPDDHTL*QDRNFS
Trigger: GGAGAAGTTTCTGTCTTGTCACAGGGTGTGGTCATC...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAACTGGCCCTTCTGGTATaGACCTACTTATCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRELALLV*TYLSSF
Trigger: GAAAGAAGATAAGTAGGTTCATACCAGAAGGGCCAG...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAGTAATGATGGGTACATaGCAACCTGATGTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRVMMGT*QPDVVA
Trigger: GGCCACAACATCAGGTTGTCATGTACCCATCATTAC...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGAGCCCGCCCAGCTCGTaGGTGAAAAAGGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLESPPSS*VKKEGI
Trigger: GATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCT...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACAGGGGTTCATTTTCTaGCTCAGCATTCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAQGFIF*LSIQHA
Trigger: AGCATGCTGAATGCTGAGTCAGAAAATGAACCCCTG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCCAAACCTTCTTATATaGGATGAGCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMPNLLI*DELCRN
Trigger: GTTCCGACAGAGCTCATCTCATATAAGAAGGTTTGG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACATTCGCTGTTTCACTTaGTCCCACTCAACCAACATT +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNIRCFT*SHSTNI
Trigger: AATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAAT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATTCGCTGTTTCACTTaGTCCCACTCAACCAACATT +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSIRCFT*SHSTNI
Trigger: AATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAAT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTAGGTACGCCAAGGCCTaGCTGACAAACTCCATGCGC +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSRYAKA*LTNSMR
Trigger: GCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAAAGAAAGGCAACTGCTaGTTCAAACTGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAKKGNC*FKLRCQ
Trigger: CTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGAGGAGGACATGGAGTaGTTGATATTTCACACACAA +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNEEDME*LIFHTQ
Trigger: TTGTGTGTGAAATATCAAGCACTCCATGTCCTCCTC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCACAAGAACTGGGATTTaGTCCATCCGAGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSITRTGI*SIRVLA
Trigger: GGCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAAAATGGGCACTTCCTaGTCTTTGATGAGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSIKMGTS*SLMSPP
Trigger: GGGCGGGCTCATCAAAGAGCAGGAAGTGCCCATTTT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTTTTTGGTCAGCAAATaGTGGACACTGCGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNFLVSK*WTLRKS
Trigger: ACTTTTCCGCAGTGTCCAGCATTTGCTGACCAAAAA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGATGCTGTCGATCACTaGAGCTCTTCCAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMADAVDH*SSSKPS
Trigger: AGAAGGTTTGGAAGAGCTGCAGTGATCGACAGCATC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAGGCTCAAAGGTGGTaGCTGCACTCAGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQEAQRW*LHSDSP
Trigger: TGGAGAGTCTGAGTGCAGCCACCACCTTTGAGCCTC...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTTGTTTTCCGTAGCTaGGGACAATCTTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLVFRS*GQSSVL
Trigger: AAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGAGTGAGCCTGTCTTGTaGGGAGCTGGTGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLESEPVL*GAGAIV
Trigger: GACGATGGCACCAGCTCCCCACAAGACAGGCTCACT...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATCCAACAACTGCTTCTaGAACTGTGAGAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASNNCF*NCERVS
Trigger: GCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTCCTCCCTTGGGTCCGTaGACTCAAACTTCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSPPLGP*TQTSGC
Trigger: ACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGG...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCCTTGTCAGCATTCTTaGCAAGGTCATACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMPCQHS*QGHTAL
Trigger: CAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAATATACCGTTCGGCAATaGAGAGTGCCATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREYTVRQ*RVPCSS
Trigger: TGAAGAACATGGCACTCTCCATTGCCGAACGGTATA...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTATACCGTTCGGCAATaGAGAGTGCCATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMYTVRQ*RVPCSS
Trigger: TGAAGAACATGGCACTCTCCATTGCCGAACGGTATA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAGCACCAGCCTCGCATTaGTGTCCCCAGACGTTCGGT +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQAPASH*CPQTFG
Trigger: ACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGC...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGTGCCATGTGGTGGTCTaGATTCTGTACATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWCHVVV*ILYIAD
Trigger: GTCTGCAATGTACAGAATCCAGACCACCACATGGCA...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAAATCCACGATTCTCATaGGATAGTGAAGAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSNPRFS*DSEEEV
Trigger: TACCTCTTCTTCACTATCCCATGAGAATCGTGGATT...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAAAGAACCTCATCCCCTaGATGCAGGGCTGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQKNLIP*MQGWCA
Trigger: TGCACACCAGCCCTGCATCCAGGGGATGAGGTTCTT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGCTCCATCCGAGTCCTaGCCCTTCTGGTATGAACCT +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQAPSES*PFWYEP
Trigger: AGGTTCATACCAGAAGGGCCAGGACTCGGATGGAGC...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGACAACCTGATGTTGTaGCCTTGCAAATTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMADNLML*PCKFSL
Trigger: CAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGGCTGGGTCTGCATCCTaGCCCCAGTGTAAAATGGGC +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEAGSAS*PQCKMG
Trigger: GCCCATTTTACACTGGGGCCAGGATGCAGACCCAGC...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCCTGAGCAATCTACTGTaGGCCAGATACCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSILSNLL*ARYPRE
Trigger: CTCTCTGGGGTATCTGGCCCACAGTAGATTGCTCAG...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGCCGCCCAGCTGGGCCTaGTGCAAATTTCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEPPSWA*CKFPKT
Trigger: TGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGG...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATTCGTGGCTGAGGAGCTaGGCACTCTGTCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDSWLRS*ALCPED
Trigger: GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGA...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GTCCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCTGGATTGCGGGGCACTaGTCTGGGGGACGACAGGGC +
Preference number: 4 (lower is better)
Translates to: VPGLYLSFFIQQTYWQQLWIAGH*SGGRQG
Trigger: GCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCA...GAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR TCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGACAGTCCTCCAGGGTaGCAAGATGGGACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSDSPPG*QDGTRG
Trigger: TCCTCTAGTCCCATCTTGTCACCCTGGAGGACTGTC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTCTGGTCTTGAACTCCTaGTCTCAGGTGATCACCTGC +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFLVLNS*SQVITC
Trigger: GCAGGTGATCACCTGAGATCAGGAGTTCAAGACCAG...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAGACAGGAACAAACCCTaGCAGTCTCAAAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGDRNKP*QSQSAP
Trigger: GGGGGCACTTTGAGACTGTCAGGGTTTGTTCCTGTC...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTCAGTGAGTTTATTATaGGCCATTCTGAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNSVSLL*AILRQE
Trigger: TTCCTGTCTCAGAATGGCTCATAATAAACTCACTGA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAAATCTCCAGGCCTCTaGAAAGGATCCAGATCAAGT +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRKSPGL*KGSRSS
Trigger: ACTTGATCTGGATCCTTTTCAGAGGCCTGGAGATTT...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTGGAAATTTGGCAAGTaGTGTGAACCACCTAATGAA +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNWKFGK*CEPPNE
Trigger: TTCATTAGGTGGTTCACATCACTTGCCAAATTTCCA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAATTCCTTTCCCAGCTaGCTGAGGCTAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSINSFPS*LRLRES
Trigger: ACTCTCCCTTAGCCTCAGTCAGCTGGGAAAGGAATT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAGCAGCACAGACCACTTaGAATCTCTTTTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRAAQTT*NLFSEH
Trigger: GTGTTCTGAAAAGAGATTTCAAGTGGTCTGTGCTGC...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAACACACAAAGAGGTTTTaGAATCATCTGCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREHTKRF*NHLLQW
Trigger: CCATTGCAGCAGATGATTTCAAAACCTCTTTGTGTG...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACCTAGGCACGTGGAGCTaGTCCAGAGGATGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNLGTWS*SRGCGE
Trigger: CTCCCCACATCCTCTGGATCAGCTCCACGTGCCTAG...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGCAATTACTCTGATGTaGATCTTTGATGACTTCCGA +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSAITLM*IFDDFR
Trigger: TCGGAAGTCATCAAAGATTCACATCAGAGTAATTGC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR TCA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCCACTGCAATTACTCTaGTGTGAATCTTTGATGACT +
Preference number: 4 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSPLQLL*CESLMT
Trigger: AGTCATCAAAGATTCACATCAGAGTAATTGCAGTGG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR GCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGAGTATCCATTGGAGATaGAGATCCTTGTGCTACAGC +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWSIHWR*RSLCYS
Trigger: GCTGTAGCACAAGGATCTGCATCTCCAATGGATACT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATCCGTCTCCTGGGACGTaGGTGTTAGGGTACGGGAAC +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDPSPGT*VLGYGN
Trigger: GTTCCCGTACCCTAACACGCACGTCCCAGGAGACGG...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATCCACCAGGTTAGGCTaGAGGTGTCCATTTACAATT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASTRLG*RCPFTI
Trigger: AATTGTAAATGGACACCTGCAGCCTAACCTGGTGGA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGAAAAGAAAGGCAACTaGTGCTTCAAACTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAEKKGN*CFKLRC
Trigger: ACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGTCATACAGCTTTGCTaGCTCTTCAAACAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMVIQLC*LFKQSF
Trigger: AAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGAC...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGAGGAGGACATGGAGTaGTTGATATTTCACACACAA +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSEEDME*LIFHTQ
Trigger: TTGTGTGTGAAATATCAAGCACTCCATGTCCTCCTC...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGTACCCCTTCCTCAAGTaGAAGCTGGGGGCACTTGCA +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEYPFLK*KLGALA
Trigger: TGCAAGTGCCCCCAGCTTGCACTTGAGGAAGGGGTA...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAAAGTCTGTAGTTCTTTaGTTTAAAGCTGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSKSVVL*FKAACS
Trigger: AGAACAGGCAGCTTTAAAGCAAAGAACTACAGACTT...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGGCAAATGCTGGACACTaGGGAAAAGTCTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWANAGH*GKVCSS
Trigger: AGAACTACAGACTTTTCCGCAGTGTCCAGCATTTGC...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAGACAAAGGTTCTGGTaGCTAGTAGAGAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNRQRFW*LVEKKD
Trigger: ATCCTTTTTCTCTACTAGGCACCAGAACCTTTGTCT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCCTCAGTCATTTCCGATaGCCACAAAAGCACAAACAA +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGLSHFR*PQKHKQ
Trigger: TTGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAG...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGCGCCCACACAGGATaGCCTTCCACCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNSAHTG*PSTSPS
Trigger: GGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCTGTTCATGTACTCCTaGAACCAGGTTTTAAACTCT +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNLFMYS*NQVLNS
Trigger: AGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTTGTTTTCCGTAGCTaGGGACAATCTTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMALVFRS*GQSSVL
Trigger: AAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAATCCGCCACTTCACTCTaGTTGTCGGTGACGTCACAT +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQSATSL*LSVTSH
Trigger: ATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATCGTCAAAACACACTTaGTTCAACTTCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASSKHT*FNFSHR
Trigger: CCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACCTTGTCAGCATTCTTaGCAAGGTCATACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAPCQHS*QGHTAL
Trigger: CAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGTATACCGTTCGGCAATaGAGAGTGCCATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWYTVRQ*RVPCSS
Trigger: TGAAGAACATGGCACTCTCCATTGCCGAACGGTATA...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGACTCCCACAAAGCATaGCACTTAATTCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMADSHKA*HLIHED
Trigger: GTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR CCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGATGCTTTTATCTCCACTaGGATTGCAACAGAACGGCA +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRCFYLH*DCNRTA
Trigger: TGCCGTTCTGTTGCAATCCCAGTGGAGATAAAAGCA...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGATCTTAACATTCTGCTaGGAAAGAGTCTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMILTFC*ERVYLR
Trigger: CCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGAT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGAAGAACCTCATCCCCTaGATGCAGGGCTGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEKNLIP*MQGWCA
Trigger: TGCACACCAGCCCTGCATCCAGGGGATGAGGTTCTT...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAGGAAGGCATCTGCCGTaGCAGAGCTCACCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQGRHLP*QSSPVS
Trigger: CGAAACTGGTGAGCTCTGCCACGGCAGATGCCTTCC...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACACTAGACAAAGGTTCTaGTGCCTAGTAGAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNTRQRF*CLVEKK
Trigger: CTTTTTCTCTACTAGGCACCAGAACCTTTGTCTAGT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATAAGGGCGTCTTCTCCTaGTGCCAGCAGTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNKGVFS*CQQCVQ
Trigger: CTGCACACACTGCTGGCATCAGGAGAAGACGCCCTT...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACGCCAAGGCCTGCCTaGCAAACTCCATGCGCACTT +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNTPRPA*QTPCAL
Trigger: AAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTCGTGGCTGAGGAGCTaGGCACTCTGTCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLSWLRS*ALCPED
Trigger: GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCCACCAGGCTCGTGGCTaGGGAGCTGAGCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCHQARG*GAEHSV
Trigger: GACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTG...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCACTAAGTTGCACTTTATaGAAAGTCCACAGAGTACTC +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSLSCTL*KVHRVL
Trigger: GAGTACTCTGTGGACTTTTCATAAAGTGCAACTTAG...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCAAAGAGTTAGTTCTCTaGAAAAGTGGGCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGKELVL*KSGLKM
Trigger: CATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGAAATCTCCAGGCCTCTaGAAAGGATCCAGATCAAGT +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPKSPGL*KGSRSS
Trigger: ACTTGATCTGGATCCTTTTCAGAGGCCTGGAGATTT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAAGCCCGCCCAGCTCGTaGGTGAAAAAGGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTSPPSS*VKKEGI
Trigger: GATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCT...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGACACACAAAGAGGTTTTaGAATCATCTGCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRHTKRF*NHLLQW
Trigger: CCATTGCAGCAGATGATTTCAAAACCTCTTTGTGTG...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACCCCTCTGGGATCACTaGCTCCCCACTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTPLWDH*LPTSCS
Trigger: TGAACAGGAAGTGGGGAGTCAGTGATCCCAGAGGGG...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATGTAGATGACAGCCACTaGGGTCAACTGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDVDDSH*GQLGPT
Trigger: TGTGGGCCCCAGTTGACCTCAGTGGCTGTCATCTAC...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTCTAACACAAGTTACTaGTCAAGTGAGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSNTSY*SSEKRL
Trigger: CAGCCTTTTCTCACTTGATCAGTAACTTGTGTTAGA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAGGGGAAGCTCTGAGATaGCCTCAGTCTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQGEALR*PQSQQQ
Trigger: TTGCTGCTGAGACTGAGGGCATCTCAGAGCTTCCCC...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR GCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGATTCGCTGTTTCACTTaGTCCCACTCAACCAACATT +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWIRCFT*SHSTNI
Trigger: AATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAAT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAACTTCAGGGCATCCGTTaGCGGTGTCAACAACACGTC +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQLQGIR*RCQQHV
Trigger: GACGTGTTGTTGACACCGGCAACGGATGCCCTGAAG...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAAGCGCAGCCGCTCCATaGGGAAAAGAAAGGCAACTG +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQSAAAP*GKERQL
Trigger: CAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCT...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCGTCCACAAATTTATTTaGGCTTATTCCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGVHKFI*AYSLSP
Trigger: AGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGAC...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGTCCACAAATTTATTTaGGCTTATTCCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMVHKFI*AYSLSP
Trigger: AGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGAC...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR GCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAGATGTACTGACAGTGTaGCGACCCAGACTCCCACAA +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGDVLTV*RPRLPQ
Trigger: TTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATC...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGCAGAGCAGACCACTaGCCACTGTCTCAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNSRADH*PLSQGS
Trigger: GGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGGGATTACAGGCGCCTaGCACCATGCCCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNGITGA*HHAQLI
Trigger: AATCAGCTGGGCATGGTGGCAGGCGCCTGTAATCCC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAAAAAAGGAAGGCATCTaGCGTGGCAGAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGKKEGI*RGRAHQ
Trigger: CTGGTGAGCTCTGCCACGGCAGATGCCTTCCTTTTT...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACTGGGAACAAATCAGTaGTTAATTTACCTCAGATAT +
Preference number: 4 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSLGTNQ*LIYLRY
Trigger: ATATCTGAGGTAAATTAAGCACTGATTTGTTCCCAG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTAGCTCTTCAAAACTaGGTATCTCAGTCATTTCCG +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMALALQN*VSQSFP
Trigger: CGGAAATGACTGAGATACGCAGTTTTGAAGAGCTAG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACATCACCATTCGTTGTaGGCTACACAAATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAHHHSL*ATQIQR
Trigger: TCTCTGAATTTGTGTAGCGCACAACGAATGGTGATG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR CCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAAAGTTCCGTTCCACATaGGGAAGCTCTGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGKFRST*GSSEMP
Trigger: GGGCATCTCAGAGCTTCCCCATGTGGAACGGAACTT...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCTCATTTGTTTTACCATaGTCCACATGTCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGSFVLP*STCRKC
Trigger: GCATTTCCGACATGTGGACCATGGTAAAACAAATGA...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTCATTTGTTTTACCATaGTCCACATGTCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSFVLP*STCRKC
Trigger: GCATTTCCGACATGTGGACCATGGTAAAACAAATGA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCTCCAGGCAAGGGAGCTaGCAGTTTAATGTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSISRQGS*QFNVQE
Trigger: TTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGA...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTGTTCATGTACTCCTaGAACCAGGTTTTAAACTCT +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLFMYS*NQVLNS
Trigger: AGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAAGCACCAGTGCTACATaGACAGCATGGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTSTSAT*TAWQRS
Trigger: GCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCT...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAGCAGTCAACTCACAGTaGAGCAGCTACAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGAVNSQ*SSYRGV
Trigger: CACTCCTCTGTAGCTGCTCCACTGTGAGTTGACTGC...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCACCCATGAGCCTGCCTaGCCAATTACCTTAATGAGT +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSITHEPA*PITLMS
Trigger: ACTCATTAAGGTAATTGGCCAGGCAGGCTCATGGGT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGATCCTTCCTGGAACATaGAATCCTACCGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPILPGT*NPTDKQ
Trigger: CTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGAT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGGAGTCCTGGCCCTTCTaGTATGAACCTACTTATCTT +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPESWPF*YEPTYL
Trigger: AAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTC...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGCTGGGTCTGCATCCTaGCCCCAGTGTAAAATGGGC +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTAGSAS*PQCKMG
Trigger: GCCCATTTTACACTGGGGCCAGGATGCAGACCCAGC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCACTAGACAAAGGTTCTaGTGCCTAGTAGAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGTRQRF*CLVEKK
Trigger: CTTTTTCTCTACTAGGCACCAGAACCTTTGTCTAGT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGAACTGTACCAAGGCGTaGATAATTGAGTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPNCTKA*IIESSP
Trigger: GGGAGATGACTCAATTATCCACGCCTTGGTACAGTT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAAGCTGTTCAGCTTGCTaGAGGAGCTCACCAAACCCC +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTSCSAC*RSSPNP
Trigger: GGGGTTTGGTGAGCTCCTTCAGCAAGCTGAACAGCT...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGGGGTCCCACATCACTaGTGTAGCTTGGCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNGVPHH*CSLARF
Trigger: AAAGCGAGCCAAGCTACATCAGTGATGTGGGACCCC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACCCGCCCAGCTGGGCCTaGTGCAAATTTCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNPPSWA*CKFPKT
Trigger: TGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGG...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AAGCGGATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTTGGATTGCGGGGCACTaGTCTGGGGGACGACAGGGC +
Preference number: 4 (lower is better)
Translates to: KRIIEELNQTSQINQKPVWIAGH*SGGRQG
Trigger: GCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCA...AACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATCCGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR TCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAATGGCACTTAATTCATaGGGACCTCCATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQMALNS*GPPSAP
Trigger: TGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCAT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATGTGCCTGATGTACTaGCAGTGTGCCGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNMCLMY*QCADPD
Trigger: GTCTGGGTCGGCACACTGTCAGTACATCAGGCACAT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCAGAACACAGCTCCACTaGCCCTCAGGCCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLRTQLH*PSGRIL
Trigger: AAGGATGCGGCCTGAGGGTCAGTGGAGCTGTGTTCT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATCTAGGCCAGGTCTGCTaGGGCCACCAAAGCATATGT +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDLGQVC*GHQSIC
Trigger: ACATATGCTTTGGTGGCCTCAGCAGACCTGGCCTAG...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGAGTCAAATTAAACAATaGGATTGCAGGGTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSQIKQ*DCRVPL
Trigger: TAAAGGGACCCTGCAATCTCATTGTTTAATTTGACT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR GCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCGGTACTCCTCAGCCATaGCGAAGGTCCTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCGTPQP*RRSSSG
Trigger: CCCGGAAGAGGACCTTCGGCATGGCTGAGGAGTACC...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTGATGCCAGCAGTGTGTaGAGAATTCGCTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFDASSV*RIRCFT
Trigger: AGTGAAACAGCGAATTCTGCACACACTGCTGGCATC...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTGCGCACTTCCACGCTaGTGCGGTTCTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLCALPR*CGSSGH
Trigger: ATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAGCGCAGCCGCTCCATaGGGAAAAGAAAGGCAACTG +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDSAAAP*GKERQL
Trigger: CAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTAGGTGCCTGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFRCLPP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGGTGGCAGGCACCT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCCTCAAGCGAACTGCCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLLKRTA*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGGCAGTTCGCTTGAG...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATCATAAAGCCCCTGGGTaGCACCTGAAAGCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDHKAPG*HLKACL
Trigger: TAGGCAGGCTTTCAGGTGGCACCCAGGGGCTTTATG...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATTCCCGCTCAGCTGCCTaGCTAGCTCTTCAAAACTGC +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDSRSAA*LALQNC
Trigger: GCAGTTTTGAAGAGCTAGGCAGGCAGCTGAGCGGGA...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATACATCTGCCGTCTCCTaGGACGTGCGTGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNTSAVS*DVRVRV
Trigger: TACCCTAACACGCACGTCCCAGGAGACGGCAGATGT...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAAGACTCTCCAATCGCTaGGAGATGTGGGATATGTCA +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQRLSNR*EMWDMS
Trigger: TGACATATCCCACATCTCCCAGCGATTGGAGAGTCT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CCA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGATCATTTGTTTTACCATaGTCCACATGTCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRSFVLP*STCRKC
Trigger: GCATTTCCGACATGTGGACCATGGTAAAACAAATGA...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTTTAAACTCTCCCAGCTaGTGCTGGGCTCGATTAACT +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFLNSPS*CWARLT
Trigger: AGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAA...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAATCCGCCACTTCACTCTaGTTGTCGGTGACGTCACAT +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQSATSL*LSVTSH
Trigger: ATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAGTGAGCCTGTCTTGTaGGGAGCTGGTGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVSEPVL*GAGAIV
Trigger: GACGATGGCACCAGCTCCCCACAAGACAGGCTCACT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTGTTGCGGGGCACTGATCTaGGGGACGACAGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLYLSFFIQQTYWQQLLCCGALI*GTTGLS
Trigger: GCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCA...ACAAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CCA 90 bp CGGATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTTCTTGCGGGGCACTGATCTaGGGGACGACAGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RIIEELNQTSQINQKPVSCGALI*GTTGLS
Trigger: GCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCA...AGAAACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR CCA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCAAAGGCTTTGTTTCCTaGCTCATTTTGGGTAGATTT +
Preference number: 4 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGKGFVS*LILGRF
Trigger: AAATCTACCCAAAATGAGCCAGGAAACAAAGCCTTT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTAAGCAAAGGCACCTTTaGGGACCCTTTGGGGATCTT +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSKQRHL*GPFGDL
Trigger: AAGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGGGGTTTCCCCATGTTaGCCAGACTGGTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNGVSPC*PDWSQT
Trigger: GGTTTGAGACCAGTCTGGCCAACATGGGGAAACCCC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTGACAACCTGATGTTGTaGCCTTGCAAATTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFDNLML*PCKFSL
Trigger: CAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCTCGAAATCTCACATCTaGAAGACAAGACGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSISKSHI*KTRRLV
Trigger: CACTAGGCGTCTTGTCTTCCAGATGTGAGATTTCGA...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAATTTTTCCTTTTCGGTTaGAAACAAGTGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREFFLFG*KQVAER
Trigger: TCTTTCTGCCACTTGTTTCCAACCGAAAAGGAAAAA...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGATTCCAGAAATTTACTaGCTACAGACAGGGATAGTG +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWIPEIY*LQTGIV
Trigger: CACTATCCCTGTCTGTAGCCAGTAAATTTCTGGAAT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATCCACTCAACCAACATTaGCTCCCGATGGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNPLNQH*LPMVLL
Trigger: GAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGG...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAACTTGGCTCGCTTTCTTaGGTAAAGTCAAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQLGSLS*VKSRAS
Trigger: AGACGCCCTTGACTTTACTCAAGAAAGCGAGCCAAG...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCTCCGGGTGTACAGCATaGGGAGCCGCACGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCSGCTA*GAARSS
Trigger: TGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGA...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGGGGTACATGACAACCTaGTGTTGTGGCCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEGYMTT*CCGLAN
Trigger: ATTTGCAAGGCCACAACATCAGGTTGTCATGTACCC...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCGACAGGAACAAACCCTaGCAGTCTCAAAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLDRNKP*QSQSAP
Trigger: GGGGGCACTTTGAGACTGTCAGGGTTTGTTCCTGTC...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAACTCTCCCAGCTGGTaGTGGGCTCGATTAACTACC +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDNSPSW*WARLTT
Trigger: GGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATCTTGTGGGGAGCTGGTaGCATCGTCGTCAAAACACA +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDLVGSW*HRRQNT
Trigger: TGTGTTTTGACGACGATGGCACCAGCTCCCCACAAG...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTAAGAAAGGCAACTGCTaGTTCAAACTGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSKKGNC*FKLRCQ
Trigger: CTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTAAGGTCATACAGCTTTaGTGCCTCTTCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFKVIQL*CLFKQS
Trigger: GGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGCTTTTTCTAGGTCTATaGTTTTATCTCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWLFLGL*FYLHWD
Trigger: ATCCCAGTGGAGATAAAAGCATAGACCTAGAAAAAG...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCGCAGCTACAGAGGAGTaGAGTGGCAAGGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLAATEE*SGKVYP
Trigger: GGGGTAAACCTTGCCACTGCACTCCTCTGTAGCTGC...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTCTAAATCAAGGCCTCTaGAGGGCTCATGTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFLNQGL*RAHVSR
Trigger: TCTTGAAACATGAGCCCTGCAGAGGCCTTGATTTAG...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAATAAGCTCGGCTCACTaGAACCTCCGCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVISSAH*NLRLLG
Trigger: ACCCAAGAGGCGGAGGTTGCAGTGAGCCGAGCTTAT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAAAATGGGCACTTCCTaGTCTTTGATGAGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDKMGTS*SLMSPP
Trigger: GGGCGGGCTCATCAAAGAGCAGGAAGTGCCCATTTT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGAAGTCTGTAGTTCTTTaGTTTAAAGCTGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PQAASFLEHGILPISSSWKSVVL*FKAACS
Trigger: AGAACAGGCAGCTTTAAAGCAAAGAACTACAGACTT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAACTGGGAACAAATCAGTaGTTAATTTACCTCAGATAT +
Preference number: 4 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRELGTNQ*LIYLRY
Trigger: ATATCTGAGGTAAATTAAGCACTGATTTGTTCCCAG...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATCCGGGACTCTTCGATaGCAGACAGCAGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVSGTLR*QTAGHC
Trigger: ACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTCTCCCAGCTGGTGCTaGGCTCGATTAACTACCTGT +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNSPSWC*ARLTTC
Trigger: ACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGACCCAGACGTTCGGTATaGTATCATTCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGPRRSV*YHSSKG
Trigger: ACCTTTGCTGGAATGATACCATACCGAACGTCTGGG...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGTCTCAAGGCTCCAGTTaGCCCATTCAGGAACAAACA +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLESQGSS*PIQEQT
Trigger: TGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGA...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTTCTCAAGGCTCCAGTTaGCCCATTCAGGAACAAACA +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSSQGSS*PIQEQT
Trigger: TGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGA...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAATCCTTCCTGGAACATaGAATCCTACCGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQILPGT*NPTDKQ
Trigger: CTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGAT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGCTTCCTGTGTAGCTaGGATTACAGGTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNSFLCS*DYRCLP
Trigger: TGGCAGGCACCTGTAATCCCAGCTACACAGGAAGCT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAGGGGTTTCCCCATGTTaGCCAGACTGGTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVGVSPC*PDWSQT
Trigger: GGTTTGAGACCAGTCTGGCCAACATGGGGAAACCCC...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAAGTTCTCTGAAAAAGTaGGCTGAAGATGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSSSLKK*AEDEFL
Trigger: TAAAAACTCATCTTCAGCCCACTTTTTCAGAGAACT...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGAATATCCTCTTTCCCTaGGTTAGCAACTTAGAACCA +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPNILFP*VSNLEP
Trigger: TGGTTCTAAGTTGCTAACCCAGGGAAAGAGGATATT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACTTGGCTCGCTTTCTTaGGTAAAGTCAAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTLGSLS*VKSRAS
Trigger: AGACGCCCTTGACTTTACTCAAGAAAGCGAGCCAAG...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGATCTGTATTGTTCCTaGGGGCCCTACGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNDLYCS*GPYGNA
Trigger: TGCATTACCGTAGGGCCCTCAGGAACAATACAGATC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAGGACATGGAGTGCTTaGTATTTCACACACAAATCT +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSIRTWSA*YFTHKS
Trigger: AGATTTGTGTGTGAAATATCAAGCACTCCATGTCCT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTGGAGTGCAGTGGCATaGTCTCAGATCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLWSAVA*SQITAT
Trigger: GGTTGCAGTGATCTGAGATCATGCCACTGCACTCCA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAACTTCAGTTTTCCCTCTaGAGTTGGGGAGTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQLQFSL*SWGVKE
Trigger: CTCTTTGACTCCCCAACTTCAGAGGGAAAACTGAAG...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAGCTCAAGTCACTTCCTaGGTGGCATGCTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQAQVTS*VACWKF
Trigger: AAATTTCCAGCATGCCACTCAGGAAGTGACTTGAGC...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAGCAGCACAGACCACTTaGAATCTCTTTTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGAAQTT*NLFSEH
Trigger: GTGTTCTGAAAAGAGATTTCAAGTGGTCTGTGCTGC...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTAGAATTCTCCCCCACTaGGTTTCTAACACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFRILPH*VSNTSY
Trigger: GTAACTTGTGTTAGAAACTCAGTGGGGGAGAATTCT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CAGACTTCACAGATCAACCAGAAACCTGTTTCTCCCAAGAACATGTCAATCACTCCAGGCCAAGGTATCTaGAAGGGAACCACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QTSQINQKPVSPKNMSITPGQGI*KGTTLE
Trigger: TTCCAGAGTGGTTCCCTTTCAGATACCTTGGCCTGG...AGTGATTGACATGTTCTTGGGAGAAACAGGTTTCTGGTTGATCTGTGAAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR GCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTTCCACCAGGTTAGGCTaGAGGTGTCCATTTACAATT +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSSTRLG*RCPFTI
Trigger: AATTGTAAATGGACACCTGCAGCCTAACCTGGTGGA...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATGGGTGACAACTACTaGTCAGGGAGCAAACACCCA +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNMGDNY*SGSKHP
Trigger: TGGGTGTTTGCTCCCTGAGCAGTAGTTGTCACCCAT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGGGATCTTAACATTCTaGTGGGAAAGAGTCTACCTC +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSGILTF*WERVYL
Trigger: GAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGACTAAATCAAGGCCTCTaGAGGGCTCATGTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGLNQGL*RAHVSR
Trigger: TCTTGAAACATGAGCCCTGCAGAGGCCTTGATTTAG...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTAGTAGAACTGCAGGATaGAAGGAAAGGCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSSRTAG*KERQIH
Trigger: GTGGATTTGCCTTTCCTTGCATCCTGCAGTTCTACT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAACAAGAACTGGGATTTaGTCCATCCGAGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVTRTGI*SIRVLA
Trigger: GGCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGCAAATGCTGGACACTaGGGAAAAGTCTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSANAGH*GKVCSS
Trigger: AGAACTACAGACTTTTCCGCAGTGTCCAGCATTTGC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCAGTCAGTGTGGGGACTaGCAAGACTTTGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLSQCGD*QDFVRP
Trigger: AGGCCTGACAAAGTCTTGGCAGTCCCCACACTGACT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGCTGGTATTTCTGAGATaGAGGAACAAAAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPLVFLR*RNKSSI
Trigger: AATTGAGCTTTTGTTCCTGCATCTCAGAAATACCAG...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTTTCCTTCCTGTCCCTaGCCTGTGAGGGATACCAAT +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNFPSCP*PVRDTN
Trigger: ATTGGTATCCCTCACAGGGCAGGGACAGGAAGGAAA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAACTAGCTCTTCAAAACTaGGTATCTCAGTCATTTCCG +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQLALQN*VSQSFP
Trigger: CGGAAATGACTGAGATACGCAGTTTTGAAGAGCTAG...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAATTATCCCGCTCAGCTaGCTGCCTAGCTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQIIPLS*LPSSSK
Trigger: TTTTGAAGAGCTAGGCAGGCAGCTGAGCGGGATAAT...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGTACAGAAAGGAACATaGAGAACACATCCACCAACG +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSVQKGT*RTHPPT
Trigger: CGTTGGTGGATGTGTTCTGCATGTTCCTTTCTGTAC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCCAAGAGGCTCAAAGGTaGTGGCTGCACTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLQEAQR*WLHSDS
Trigger: AGAGTCTGAGTGCAGCCACCACCTTTGAGCCTCTTG...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATGTCTTGTGGGGAGCTaGTGCCATCGTCGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVCLVGS*CHRRQN
Trigger: GTTTTGACGACGATGGCACCAGCTCCCCACAAGACA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAATCTTAACATTCTGCTaGGAAAGAGTCTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQILTFC*ERVYLR
Trigger: CCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGAT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCCCGATAAGCAGCAGTTaGTTCCATTATCTACAGATT +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSIPISSS*FHYLQI
Trigger: AATCTGTAGATAATGGAACCAACTGCTGCTTATCGG...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTACAGGCTGGAGTGCAGTaGCATGATCTCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVQAGVQ*HDLRSL
Trigger: CAGTGATCTGAGATCATGCCACTGCACTCCAGCCTG...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTTCGAAATCTCACATCTaGAAGACAAGACGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSSKSHI*KTRRLV
Trigger: CACTAGGCGTCTTGTCTTCCAGATGTGAGATTTCGA...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAACTGTCAGAAGATGGTaGAAGATGGGAAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGTVRRW*KMGRLV
Trigger: CACAAGTCTTCCCATCTTCCACCATCTTCTGACAGT...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGGAAAAGGCTGTACTTTaGCTCTTTCCTTTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPEKAVL*LFPFFL
Trigger: TAGAAAGAAAGGAAAGAGCCAAAGTACAGCCTTTTC...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 72 bp GGCAAACTGATGAATCCTGCAATCAGAGCTGATGATTaGGGGGATGGTCTTGGACCATCTGGACTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: GKLMNPAIRADD*GDGLGPSGLKS
Trigger: TGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATCAGCTCTGATTGCAGGATTCATCAGTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCTCTTCCACACTTTCCTaGTTCAGGGGCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCSSTLS*FRGTSF
Trigger: GAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGA...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp ACTTCACAGATCAACCAGAAACCTGTTTCTCCCAAGAACATGTCAATCACTGAATCTTCCACACTTTCCTaGTTCAGGGGCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TSQINQKPVSPKNMSITESSTLS*FRGTSF
Trigger: GAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGA...TTCAGTGATTGACATGTTCTTGGGAGAAACAGGTTTCTGGTTGATCTGTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCGGCAAGAAGCACTTCTaGGAGGTTGTGCCTGATTTC +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLGKKHF*EVVPDF
Trigger: GAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCC...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGGGAAACAGAGCAAATaGTGGGTGACAACTACTGCT +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTGKQSK*WVTTTA
Trigger: AGCAGTAGTTGTCACCCATCATTTGCTCTGTTTCCC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACCTAGTAAAGCTCAATTaGAGACAGTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNLVKLN*RQSSRV
Trigger: CACCCTGGAGGACTGTCTTCAATTGAGCTTTACTAG...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTTAACTGCCAACCAGTaGCCACTTTTCTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNLTANQ*PLFSQL
Trigger: GAGTTGGGAGAAAAGTGGTCACTGGTTGGCAGTTAA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATGGGTACATGACAACCTaGTGTTGTGGCCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDGYMTT*CCGLAN
Trigger: ATTTGCAAGGCCACAACATCAGGTTGTCATGTACCC...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATGTAATGATGGGTACATaGCAACCTGATGTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNVMMGT*QPDVVA
Trigger: GGCCACAACATCAGGTTGTCATGTACCCATCATTAC...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTAAAGAGTTAGTTCTCTaGAAAAGTGGGCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFKELVL*KSGLKM
Trigger: CATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGCCCTGAGTCTCATTTaGTCCTGGGAGACATTATTC +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTALSLI*SWETLF
Trigger: GAATAATGTCTCCCAGGATCAAATGAGACTCAGGGC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATGATGCCAGCAGTGTGTaGAGAATTCGCTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDDASSV*RIRCFT
Trigger: AGTGAAACAGCGAATTCTGCACACACTGCTGGCATC...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCGGTCTCCACAGCGCATaGAGTAGTAAATTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCGLHSA*SSKLAP
Trigger: GGGCGCTAATTTACTACTGCATGCGCTGTGGAGACC...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAACTGCTGCTTCAAACTaGGCTGTCAGGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVTAASN*AVRNRT
Trigger: AGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGGTCATACAGCTTTGCTaGCTCTTCAAACAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEVIQLC*LFKQSF
Trigger: AAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGAC...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTGTCTCTCCTTGTTGGATTaGGGGGCACTGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLYLSFFIQQTYWQQLLCLSLLD*GALIWG
Trigger: CCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAG...ACAAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR GCA 90 bp CGGATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTTCTCTCTCCTTGTTGGATTaGGGGGCACTGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RIIEELNQTSQINQKPVSLSLLD*GALIWG
Trigger: CCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAG...AGAAACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR GCA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCCTTTTTCTAGGTCTATaGTTTTATCTCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LGILTFCWERVYLREPSILFLGL*FYLHWD
Trigger: ATCCCAGTGGAGATAAAAGCATAGACCTAGAAAAAG...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGGTGCCTGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNRCLPP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGGTGGCAGGCACCT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATTTCCTTCCTGTCCCTaGCCTGTGAGGGATACCAAT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVFPSCP*PVRDTN
Trigger: ATTGGTATCCCTCACAGGGCAGGGACAGGAAGGAAA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGACTCAGTCATTTCCGATaGCCACAAAAGCACAAACAA +
Preference number: 4 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGLSHFR*PQKHKQ
Trigger: TTGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAG...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTCAAAGGGAAATAATTTaGAACTGTACCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSQREII*NCTKAW
Trigger: CCACGCCTTGGTACAGTTGCAAATTATTTCCCTTTG...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAATCGCTGGGAGATGTaGGATATGTCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVNRWEM*DMSSPR
Trigger: TCGGGGACTTGACATATCCCACATCTCCCAGCGATT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCAACATTGACTCCCGATaGTACTCCTCAGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCNIDSR*YSSAMP
Trigger: CGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTT...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTCCAACAACTGCTTCTaGAACTGTGAGAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNSNNCF*NCERVS
Trigger: GCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAATTACCTTAATGAGTaGGGAAGGGGGTCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDNYLNE*GRGSSE
Trigger: CTCAGACGACCCCCTTCCCCACTCATTAAGGTAATT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGCTGATGCCATGTGGTaGTCTGGATTCTGTACATTG +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNADAMW*SGFCTL
Trigger: CAATGTACAGAATCCAGACCACCACATGGCATCAGC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAACCGATAAGCAGCAGTTaGTTCCATTATCTACAGATT +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQPISSS*FHYLQI
Trigger: AATCTGTAGATAATGGAACCAACTGCTGCTTATCGG...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTAATCCACGATTCTCATaGGATAGTGAAGAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFNPRFS*DSEEEV
Trigger: TACCTCTTCTTCACTATCCCATGAGAATCGTGGATT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGAGTTCTCTGAAAAAGTaGGCTGAAGATGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: DPLGILTFCWERVYLREPSSLKK*AEDEFL
Trigger: TAAAAACTCATCTTCAGCCCACTTTTTCAGAGAACT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAATTCCAGAAATTTACTaGCTACAGACAGGGATAGTG +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQIPEIY*LQTGIV
Trigger: CACTATCCCTGTCTGTAGCCAGTAAATTTCTGGAAT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCGATCTGTATTGTTCCTaGGGGCCCTACGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCDLYCS*GPYGNA
Trigger: TGCATTACCGTAGGGCCCTCAGGAACAATACAGATC...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCATGGCACTTAATTCATaGGGACCTCCATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLMALNS*GPPSAP
Trigger: TGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCAT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCAGAGCAAATGATGGGTaGCAACTACTGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCRANDG*QLLLRE
Trigger: CTCCCTGAGCAGTAGTTGTCACCCATCATTTGCTCT...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAATGTTTAATGAGATGCTaGCTTCTTCCTGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQCLMRC*LLPGIS
Trigger: AGAAATACCAGGAAGAAGTCAGCATCTCATTAAACA...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTCCACCAGGTTAGGCTaGAGGTGTCCATTTACAATT +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNSTRLG*RCPFTI
Trigger: AATTGTAAATGGACACCTGCAGCCTAACCTGGTGGA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAAGAAAGGCAACTGCTaGTTCAAACTGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVKKGNC*FKLRCQ
Trigger: CTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGCACTCACAGAAAAGCCAGGCCAAGGTATCTGAAAGGGAACCACTCTGGAAAAGTCCACAAATTTATTTaGGCTTATTCCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CTHRKARPRYLKGNHSGKVHKFI*AYSLSP
Trigger: AGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGAC...TTTTCCAGAGTGGTTCCCTTTCAGATACCTTGGCCTGGCTTTTCTGTGAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR GCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGGGATCTTAACATTCTaGTGGGAAAGAGTCTACCTC +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTGILTF*WERVYL
Trigger: GAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGTAGAACTGCAGGATaGAAGGAAAGGCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNSRTAG*KERQIH
Trigger: GTGGATTTGCCTTTCCTTGCATCCTGCAGTTCTACT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAATTCCAGAGGCCTGTaGTCAATCGCACAATCAGCT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVNSRGL*SIAQSA
Trigger: AGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTACCTGTTTCTCATCTCTaGACAATTCCAGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVPVSHL*TIPEAC
Trigger: ACAGGCCTCTGGAATTGTGCAGAGATGAGAAACAGG...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATCTGATGTTGTGGCCTTaGAAATTCAGCCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNLMLWP*KFSLFL
Trigger: GAGAAACAGGCTGAATTTGCAAGGCCACAACATCAG...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTTCTTTCAGACTGAATaGCTATTAAGGGCCCCCACG +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLFFQTE*LLRAPT
Trigger: CGTGGGGGCCCTTAATAGGCATTCAGTCTGAAAGAA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGTACAGAAAGGAACATaGAGAACACATCCACCAACG +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTVQKGT*RTHPPT
Trigger: CGTTGGTGGATGTGTTCTGCATGTTCCTTTCTGTAC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTCTGTTCATGTACTCCTaGAACCAGGTTTTAAACTCT +
Preference number: 4 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSLFMYS*NQVLNS
Trigger: AGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAG...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATCCAACAACTGCTTCTaGAACTGTGAGAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVSNNCF*NCERVS
Trigger: GCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGACTCCCACAAAGCATaGCACTTAATTCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTDSHKA*HLIHED
Trigger: GTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTGCTTTTATCTCCACTaGGATTGCAACAGAACGGCA +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNCFYLH*DCNRTA
Trigger: TGCCGTTCTGTTGCAATCCCAGTGGAGATAAAAGCA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGAGTCCTGGCCCTTCTaGTATGAACCTACTTATCTT +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNESWPF*YEPTYL
Trigger: AAGATAAGTAGGTTCATACCAGAAGGGCCAGGACTC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAAGATGGGAAGACTTGTaGATTCAGCGTAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQRWEDL*IQRRIK
Trigger: CTTTATCCTACGCTGAATCCACAAGTCTTCCCATCT...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATGAAGATGGTGGAAGATaGGAAGACTTGTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDEDGGR*EDLWIQ
Trigger: CTGAATCCACAAGTCTTCCCATCTTCCACCATCTTC...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATACTGTCAGAAGATGGTaGAAGATGGGAAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDTVRRW*KMGRLV
Trigger: CACAAGTCTTCCCATCTTCCACCATCTTCTGACAGT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGCTGCAATGGAATCTTaGCTGATAAATACACGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNAAMES*LINTRG
Trigger: GCCACGTGTATTTATCAGCCAAGATTCCATTGCAGC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTGAAAAGGCTGTACTTTaGCTCTTTCCTTTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: PEACAQSHNQLVGQELGFEKAVL*LFPFFL
Trigger: TAGAAAGAAAGGAAAGAGCCAAAGTACAGCCTTTTC...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 72 bp AGGGCTCATGTTTCAAGACTTTCTAGTAAAGCTCAATaGAAGACAGTCCTCCAGGGTGACAAGATGGGACTA +
Preference number: 4 (lower is better)
Translates to: RAHVSRLSSKAQ*KTVLQGDKMGL
Trigger: TAGTCCCATCTTGTCACCCTGGAGGACTGTCTTCAATTGAGCTTTACTAGAAAGTCTTGAAACATGAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAACTAAGTTGCACTTTATaGAAAGTCCACAGAGTACTC +
Preference number: 4 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQLSCTL*KVHRVL
Trigger: GAGTACTCTGTGGACTTTTCATAAAGTGCAACTTAG...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCCAGGGGTTCATTTTCTaGCTCAGCATTCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCQGFIF*LSIQHA
Trigger: AGCATGCTGAATGCTGAGTCAGAAAATGAACCCCTG...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATTCTTCCTGGTATTTCTaGGATGCAGGAACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDSSWYF*DAGTKA
Trigger: AGCTTTTGTTCCTGCATCTCAGAAATACCAGGAAGA...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCCCTGTCCCTGCCCTGTaGGGGATACCAATATATTAT +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCPVPAL*GIPIYY
Trigger: ATAATATATTGGTATCCCTCACAGGGCAGGGACAGG...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCGAAAAACACAGTAGATaGCAGCCACTGAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLEKHSR*QPLRST
Trigger: AGTTGACCTCAGTGGCTGTCATCTACTGTGTTTTTC...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAGAAAAGAAAGGCAACTaGTGCTTCAAACTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVEKKGN*CFKLRC
Trigger: ACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTC...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCCTGATGTTGTGGCCTTaGAAATTCAGCCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLLMLWP*KFSLFL
Trigger: GAGAAACAGGCTGAATTTGCAAGGCCACAACATCAG...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAACTCAGCATTCAGCATaGTCAAGTCACTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVTQHSA*SSHFLS
Trigger: ACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGACAAAGCAAAGCATCTaGTCATTCAAATATCTGCTG +
Preference number: 4 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLETKQSI*SFKYLL
Trigger: CAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGT...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp ACTTCACAGATCAACCAGAAACCTGTTTCTCCCAAGAACATGTCAATCACTGAATCTGATGGGGATGTATaGACTCACAGAAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSQINQKPVSPKNMSITESDGDV*THRKAR
Trigger: CCTGGCTTTTCTGTGAGTGCATACATCCCCATCAGA...TTCAGTGATTGACATGTTCTTGGGAGAAACAGGTTTCTGGTTGATCTGTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATCGTCAAAACACACTTaGTTCAACTTCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVSSKHT*FNFSHR
Trigger: CCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCCCTTGTCAGCATTCTTaGCAAGGTCATACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLPCQHS*QGHTAL
Trigger: CAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGG...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAGACTCCCACAAAGCATaGCACTTAATTCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVDSHKA*HLIHED
Trigger: GTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTC...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAAGATGGGAAGACTTGTaGATTCAGCGTAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTRWEDL*IQRRIK
Trigger: CTTTATCCTACGCTGAATCCACAAGTCTTCCCATCT...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 72 bp GCTTTTTCTAGGTCTATGCTTTTATCTCCACTGGGATaGCAACAGAACGGCAAACTGATGAATCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: AFSRSMLLSPLG*QQNGKLMNPAI
Trigger: GATTGCAGGATTCATCAGTTTGCCGTTCTGTTGCAATCCCAGTGGAGATAAAAGCATAGACCTAGAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTTTTGCGCTTATTCCTTaGGCCCTATACCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: QDCTCLSLYNKHTGNSSFFALIP*ALYRSA
Trigger: TGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAA...AAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR TCA 90 bp AAACCTGTTTCTCCCAAGAACATGTCAATCACTGAAGTGACTGTATTTTCTCAATTTGCGCTTATTCCTTaGGCCCTATACCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: KPVSPKNMSITEVTVFSQFALIP*ALYRSA
Trigger: TGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAA...TTGAGAAAATACAGTCACTTCAGTGATTGACATGTTCTTGGGAGAAACAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR TCA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATCAGTGAGTTTATTATaGGCCATTCTGAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTSVSLL*AILRQE
Trigger: TTCCTGTCTCAGAATGGCTCATAATAAACTCACTGA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTCTTCCTGGTATTTCTaGGATGCAGGAACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLSSWYF*DAGTKA
Trigger: AGCTTTTGTTCCTGCATCTCAGAAATACCAGGAAGA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAGAATTCTCCCCCACTaGGTTTCTAACACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVRILPH*VSNTSY
Trigger: GTAACTTGTGTTAGAAACTCAGTGGGGGAGAATTCT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp GTCCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCAAGGTCATACAGCTTTaGTGCCTCTTCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: VPGLYLSFFIQQTYWQQLKVIQL*CLFKQS
Trigger: GGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTT...GAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR GCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCCAGCAAGTCCTTAACTaGCAACCAGTGACCACTTTT +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCQQVLN*QPVTTF
Trigger: AAAAGTGGTCACTGGTTGGCAGTTAAGGACTTGCTG...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAGACAAAGGTTCTGGTaGCTAGTAGAGAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDRQRFW*LVEKKD
Trigger: ATCCTTTTTCTCTACTAGGCACCAGAACCTTTGTCT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATGGTTTTGAAATCATCTaGTGCAATGGAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNGFEII*CNGILA
Trigger: AGCCAAGATTCCATTGCAGCAGATGATTTCAAAACC...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GTCCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCCTTGTCAGCATTCTTaGCAAGGTCATACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VPGLYLSFFIQQTYWQQLPCQHS*QGHTAL
Trigger: CAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGG...GAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
3UTR CAA 72 bp CCATCAAGAATTTTATATGTAACACTTTCTCCCAATTaGCTGACACAGGGCTCAATTCCTTTCCCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PSRILYVTLSPN*LTQGSIPFPAD
Trigger: GTCAGCTGGGAAAGGAATTGAGCCCTGTGTCAGCAAATTGGGAGAAAGTGTTACATATAAAATTCTTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTGGAAATTTGGCAAGTaGTGTGAACCACCTAATGAA +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLWKFGK*CEPPNE
Trigger: TTCATTAGGTGGTTCACATCACTTGCCAAATTTCCA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTGTTTAATGAGATGCTaGCTTCTTCCTGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNCLMRC*LLPGIS
Trigger: AGAAATACCAGGAAGAAGTCAGCATCTCATTAAACA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATCTAACACAAGTTACTaGTCAAGTGAGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVSNTSY*SSEKRL
Trigger: CAGCCTTTTCTCACTTGATCAGTAACTTGTGTTAGA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAGTCCACAAATTTATTTaGGCTTATTCCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVVHKFI*AYSLSP
Trigger: AGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGAC...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATCTGGTATTTCTGAGATaGAGGAACAAAAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDLVFLR*RNKSSI
Trigger: AATTGAGCTTTTGTTCCTGCATCTCAGAAATACCAG...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATTTTGAAATCATCTGCTaGAATGGAATCTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDFEIIC*NGILAD
Trigger: ATCAGCCAAGATTCCATTGCAGCAGATGATTTCAAA...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCGGTTTTGAAATCATCTaGTGCAATGGAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLGFEII*CNGILA
Trigger: AGCCAAGATTCCATTGCAGCAGATGATTTCAAAACC...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp CCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTGGGTGTACATTAACCTaGACTTCAAACACCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PRIVLVFLYTTNILATAPGCTLT*TSNTFP
Trigger: AGGAAAGGTGTTTGAAGTGCAGGTTAATGTACACCC...AGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CCA 90 bp CCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTATACCGTTCGGCAATaGAGAGTGCCATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGLYLSFFIQQTYWQQLLYTVRQ*RVPCSS
Trigger: TGAAGAACATGGCACTCTCCATTGCCGAACGGTATA...AAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CCA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTCGGTTGGAAACAAGTaGCAGAAAGATTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSKLRISVISDAHKSTNSVGNK*QKDLFP
Trigger: AGGAAATAAATCTTTCTGCCACTTGTTTCCAACCGA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTTTTTCCTTTTCGGTTaGAAACAAGTGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNFFLFG*KQVAER
Trigger: TCTTTCTGCCACTTGTTTCCAACCGAAAAGGAAAAA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp CAGACTTCACAGATCAACCAGAAACCTGTTTCTCCCAAGAACATGTCAATCACTGAACATGTCAATCACTaGAGTGACTGTATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: QTSQINQKPVSPKNMSITEHVNH*SDCIFS
Trigger: TGAGAAAATACAGTCACTTCAGTGATTGACATGTTC...AGTGATTGACATGTTCTTGGGAGAAACAGGTTTCTGGTTGATCTGTGAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR GCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATTTGAAATCATCTGCTaGAATGGAATCTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVFEIIC*NGILAD
Trigger: ATCAGCCAAGATTCCATTGCAGCAGATGATTTCAAA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR GCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCACAAAGCAAAGCATCTaGTCATTCAAATATCTGCTG +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLTKQSI*SFKYLL
Trigger: CAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTTCTCCTATACCGTTCGGCAATaGAGAGTGCCATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: DNRRIKPDFTDQPETCFSYTVRQ*RVPCSS
Trigger: TGAAGAACATGGCACTCTCCATTGCCGAACGGTATA...GGAGAAACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR CCA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAAAGGCTTTGTTTCCTaGCTCATTTTGGGTAGATTT +
Preference number: 4 (lower is better)
Translates to: NLLATDRDSGEGTILNRVKGFVS*LILGRF
Trigger: AAATCTACCCAAAATGAGCCAGGAAACAAAGCCTTT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTCGGTTGGAAACAAGTaGCAGAAAGATTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLSVGNK*QKDLFP
Trigger: AGGAAATAAATCTTTCTGCCACTTGTTTCCAACCGA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CCA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCAATATCCTCTTTCCCTaGGTTAGCAACTTAGAACCA +
Preference number: 4 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCNILFP*VSNLEP
Trigger: TGGTTCTAAGTTGCTAACCCAGGGAAAGAGGATATT...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 72 bp CTTAAGTCACACTCTCTAGAGGAGGACATGGAGTGCTaGATATTTCACACACAAATCTTACATCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: LKSHSLEEDMEC*IFHTQILHLLR
Trigger: CCTTAGAAGATGTAAGATTTGTGTGTGAAATATCAAGCACTCCATGTCCTCCTCTAGAGAGTGTGACTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
3UTR CAA 72 bp CTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTaGGTTCCATTATCTACAGATTATTTCTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LPGTWNPTDKQQ*VPLSTDYFFPK
Trigger: TTTTGGGAAGAAATAATCTGTAGATAATGGAACCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR TCA 90 bp GTCCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCTTCCATGAAGTGTTTTaGATTTTCGAGGGTGTACAT +
Preference number: 4 (lower is better)
Translates to: VPGLYLSFFIQQTYWQQLFHEVF*IFEGVH
Trigger: ATGTACACCCTCGAAAATTCAAAACACTTCATGGAA...GAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR GCA 90 bp CAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTGTCATACAGCTTTGCTaGCTCTTCAAACAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: QDCTCLSLYNKHTGNSSFVIQLC*LFKQSF
Trigger: AAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGAC...AAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR TCA 90 bp CCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTTCAAACACCTTTCCTaGAACTTACATCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PGLYLSFFIQQTYWQQLLFKHLS*NLHQKL
Trigger: GAGCTTTTGATGTAAGTTTCAGGAAAGGTGTTTGAA...AAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR GCA 90 bp GGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTGTGTCCACAAATTTATTTaGGCTTATTCCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLYLSFFIQQTYWQQLLCVHKFI*AYSLSP
Trigger: AGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGAC...ACAAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CCA 90 bp AGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTGATACAACAAACATACTaGCAACAGCTCCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RIVLVFLYTTNILATAPLIQQTY*QQLLCF
Trigger: AAAACAAAGGAGCTGTTGCCAGTATGTTTGTTGTAT...CAAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS TCA 90 bp GCAGATCCTTGTGCTACAGCCGTCTCCGCCGCTCAGGTGCCGGCTTaGGGACGCGGCCGCCGCTTCTCGCGCCGCTCTCCCCCGCTTCCT +
Preference number: 5 (lower is better)
Translates to: ADPCATAVSAAQVPA*GRGRRFSRRSPPLP
Trigger: AGGAAGCGGGGGAGAGCGGCGCGAGAAGCGGCGGCCGCGTCCTCAAGCCGGCACCTGAGCGGCGGAGACGGCTGTAGCACAAGGATCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000563858.5
CDS TCA 90 bp ATGCAACCTTGTGCTACAGCCGTCTCCGCCGCTCAGGTGCCGGCTTaGGGACGCGGCCGCCGCTTCTCGCGCCGCTCTCCCCCGCTTCCT +
Preference number: 5 (lower is better)
Translates to: MQPCATAVSAAQVPA*GRGRRFSRRSPPLP
Trigger: AGGAAGCGGGGGAGAGCGGCGCGAGAAGCGGCGGCCGCGTCCTCAAGCCGGCACCTGAGCGGCGGAGACGGCTGTAGCACAAGGTTGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566315.5
CDS CCA 90 bp CCCCGAGACCCGAGGAGAACTGACGCCTTGACATCTGCCGTCTCCTaGGACGTGCGTGTTAGGGTACGGGAACGCAGGCGCTCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: PRDPRRTDALTSAVS*DVRVRVRERRRSPA
Trigger: GGCGGGAGAGCGCCTGCGTTCCCGTACCCTAACACGCACGTCCCAGGAGACGGCAGATGTCAAGGCGTCAGTTCTCCTCGGGTCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
CDS-3UTR CAA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAACGCTCAGGTGCCGGCTaGAGGACGCGGCCGCCGCTT +
Preference number: 5 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRERSGAG*RTRPPL
Trigger: AAGCGGCGGCCGCGTCCTCAAGCCGGCACCTGAGCG...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS TCA 90 bp GGGCCTCCCTTGGGTCCGTGGACTCAAACTTCCGGGTGTACAGCATaGGGAGCCGCACGAAGTTCAGCCGCCGCAAGCAAGGAGGGTCAC +
Preference number: 5 (lower is better)
Translates to: GPPLGPWTQTSGCTA*GAARSSAAASKEGH
Trigger: GTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569842.5
CDS CCA 90 bp CTGGGCAACAGAGCCAGGCCAGAGTCGCGGTCCTCGATGACTCGCTaGGGCCTGGATGACGAGGATGGACTTGTCCCCTTGAGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: LGNRARPESRSSMTR*GLDDEDGLVPLSLL
Trigger: TAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCTGTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569842.5
CDS-3UTR CAA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCAACTGGAGGGCCTCCCTaGGGTCCGTGGACTCAAACT +
Preference number: 5 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSTGGPP*GPWTQT
Trigger: AGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGT...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACCTCTCCTTGTTGGATaGCGGGGCACTGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSPLLVG*RGTDLG
Trigger: CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGGCACTTCCTGCTCTTaGATGAGCCCGCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSGTSCS*MSPPSS
Trigger: CGAGCTGGGCGGGCTCATCAAAGAGCAGGAAGTGCC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS CCA 90 bp GACGTGCGTGTTAGGGTACGGGAACGCAGGCGCTCTCCCGCCTGCTaGATCTCCTGTAAGTTCCGTTCCACATGGGGAAGCTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: DVRVRVRERRRSPAC*ISCKFRSTWGSSEM
Trigger: CATCTCAGAGCTTCCCCATGTGGAACGGAACTTACAGGAGATCCAGCAGGCGGGAGAGCGCCTGCGTTCCCGTACCCTAACACGCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000568656.5
ENST00000569842.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACACTGGAGGGCCTCCCTaGGGTCCGTGGACTCAAACT +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNTGGPP*GPWTQT
Trigger: AGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGGCACTTCCTGCTCTTaGATGAGCCCGCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMGTSCS*MSPPSS
Trigger: CGAGCTGGGCGGGCTCATCAAAGAGCAGGAAGTGCC...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS TCA 90 bp AGCCAGGCCAGAGTCGCGGTCCTCGATGACTCGCTGGGGCCTGGATaGCGAGGATGGACTTGTCCCCTTGAGCCTCTTAAACTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: SQARVAVLDDSLGPG*RGWTCPLEPLKLCE
Trigger: TTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569842.5
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCCTCTCCTTGTTGGATaGCGGGGCACTGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMPLLVG*RGTDLG
Trigger: CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATGCACCAGCCTCGCATaGGTGTCCCCAGACGTTCGG +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMACTSLA*VSPDVR
Trigger: CCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569322.1
CDS-3UTR CAA 90 bp GAGCCCGCCCAGCTCGTGAGTGAAAAAGGAAGGCATCTGCCGTGGCAGAGCTCACAAGCAAAGGCACCTTaGGGGACCCTTTGGGGATCT +
Preference number: 5 (lower is better)
Translates to: EPAQLVSEKGRHLPWQSSQAKAP*GTLWGS
Trigger: AGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTTG...TGAGCTCTGCCACGGCAGATGCCTTCCTTTTTCACTCACGAGCTGGGCGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCGGGGTTTCCCCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNRGFPM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGGGGAAACCCCG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS CCA 90 bp AGGCGCTCTCCCGCCTGCTGGATCTCCTGTAAGTTCCGTTCCACATaGGGAAGCTCTGAGATGCCCTCAGTCTCAGCAGCAAGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: RRSPACWISCKFRST*GSSEMPSVSAASCS
Trigger: TGAACAGCTTGCTGCTGAGACTGAGGGCATCTCAGAGCTTCCCCATGTGGAACGGAACTTACAGGAGATCCAGCAGGCGGGAGAGCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000568656.5
ENST00000569842.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAACTGGAGGGCCTCCCTaGGGTCCGTGGACTCAAACT +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMATGGPP*GPWTQT
Trigger: AGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCTTCAGCCTCTCCTTGTaGGATTGCGGGGCACTGATC +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSFSLSL*DCGALI
Trigger: GATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAA...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGACAAGAACTGGGATTaGCTCCATCCGAGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNDKNWD*LHPSPG
Trigger: GCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGTC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS TCA 90 bp TCGGAGTTGAGAGTCGCGGTCCTCGATGACTCGCTGGGGCCTGGATaGCGAGGATGGACTTGTCCCCTTGAGCCTCTTAAACTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: SELRVAVLDDSLGPG*RGWTCPLEPLKLCE
Trigger: TTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
CDS TCA 90 bp ACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTTAATTCATaGGGACCTCCATCTGCACCAGCCTCGCATTGGTGTCCCCAGACG +
Preference number: 5 (lower is better)
Translates to: TVCRPRLPQSMALNS*GPPSAPASHWCPQT
Trigger: CGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
ENST00000569322.1
ENST00000569842.5
CDS CCA 90 bp TCAAAGGTGGTGGCTGCACTCAGACTCTCCAATCGCTGGGAGATGTaGGATATGTCAAGTCCCCGAGACCCGAGGAGAACTGACGCCTTG +
Preference number: 5 (lower is better)
Translates to: SKVVAALRLSNRWEM*DMSSPRDPRRTDAL
Trigger: CAAGGCGTCAGTTCTCCTCGGGTCTCGGGGACTTGACATATCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
CDS CCA 90 bp GCCATGTTCTTCAGCCTCTCCTTGTTGGATTGCGGGGCACTGATCTaGGGGACGACAGGGCTCAGCAGTTTGTTCATCAGCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: AMFFSLSLLDCGALI*GTTGLSSLFISSST
Trigger: GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563405.1
ENST00000564887.5
ENST00000569842.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCCCACTCAACCAACATaGACTCCCGATGGTACTCCT +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNPTQPT*TPDGTP
Trigger: AGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTCTTCAGGGCATCCGTaGCCGGTGTCAACAACACGT +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMSSGHP*PVSTTR
Trigger: ACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGAAACTTCGAACCAATaGGTAAGTCCCAGGCACCCC +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSETSNQ*VSPRHP
Trigger: GGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCACAGGGCTCAGCAGTTaGTTCATCAGCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSTGLSS*FISSST
Trigger: GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGTTCTTCAGCCTCTCCTaGTTGGATTGCGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMFFSLS*LDCGAL
Trigger: CAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAA...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAATCAGAGTGCGGGCTaGACTTCGGAGTTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSNQSAG*TSELRV
Trigger: GACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGTCTCAAGGCTCCAGTaGGCCCATTCAGGAACAAAC +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSVSRLQ*AHSGTN
Trigger: GTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGAC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAACAAGCAAAGGCACCTTaGGGGACCCTTTGGGGATCT +
Preference number: 5 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREQAKAP*GTLWGS
Trigger: AGATCCCCAAAGGGTCCCCAAAGGTGCCTTTGCTTG...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCGACAAGAACTGGGATTaGCTCCATCCGAGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGDKNWD*LHPSPG
Trigger: GCCAGGACTCGGATGGAGCAAATCCCAGTTCTTGTC...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS TCA 90 bp AGAGTGCCATGTTCTTCAGCCTCTCCTTGTTGGATTGCGGGGCACTaGTCTGGGGGACGACAGGGCTCAGCAGTTTGTTCATCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RVPCSSASPCWIAGH*SGGRQGSAVCSSAP
Trigger: TGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563405.1
ENST00000564887.5
ENST00000569842.5
CDS GCA 90 bp GACAGCATGGCAGCGCAGCCGCTCCATGCGGAAAAGAAAGGCAACTaGTGCTTCAAACTGCGCTGTCAGGAACAGGACTTGGAAGTAGAG +
Preference number: 5 (lower is better)
Translates to: DSMAAQPLHAEKKGN*CFKLRCQEQDLEVE
Trigger: CTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS CCA 90 bp TCAAGAGGCTCAAAGGTGGTGGCTGCACTCAGACTCTCCAATCGCTaGGAGATGTGGGATATGTCAAGTCCCCGAGACCCGAGGAGAACT +
Preference number: 5 (lower is better)
Translates to: SRGSKVVAALRLSNR*EMWDMSSPRDPRRT
Trigger: AGTTCTCCTCGGGTCTCGGGGACTTGACATATCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGAGCCTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 90 bp TCAAAGGTGGTGGCTGCACTCAGACTCTCCAATCGCTGGGAGATGTaGGATATGTCAAGTCCCCGAGACCCGAGGAGAACTGACCTTGTG +
Preference number: 5 (lower is better)
Translates to: SKVVAALRLSNRWEM*DMSSPRDPRRTDLV
Trigger: CACAAGGTCAGTTCTCCTCGGGTCTCGGGGACTTGACATATCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569863.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAGCAAGCTGTTCAGCTaGCTGAAGGAGCTCACCAAA +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNSKLFS*LKELTK
Trigger: TTTGGTGAGCTCCTTCAGCAAGCTGAACAGCTTGCT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CAA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGCTTGGCTCGCTTTCTaGAGTAAAGTCAAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSAWLAF*SKVKGV
Trigger: GACGCCCTTGACTTTACTCAAGAAAGCGAGCCAAGC...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGCCACTTCACTCTGGTaGTCGGTGACGTCACATCTG +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAATSLW*SVTSHL
Trigger: CAGATGTGACGTCACCGACAACCAGAGTGAAGTGGC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGAAGTAGAGGAAGGGTaGCTGGTTCACCGTAAAGTG +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSEVEEG*LVHRKV
Trigger: CACTTTACGGTGAACCAGCAACCCTTCCTCTACTTC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATTTGCGCTTATTCCTaGAGCCCTATACCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSICAYS*SPIPFG
Trigger: GCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAAT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS TCA 90 bp GGGTGTAATTCTTATAACTCTGCTCAAGGTACGCCAAGGCCTGCCTaGCAAACTCCATGCGCACTTCCACGCTGCTGCGGTTCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: GCNSYNSAQGTPRPA*QTPCALPRCCGSSG
Trigger: CCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
CDS TCA 90 bp AAAGTGGGACTCGCCATAGTCTTCCAACAACTGCTTCTGGAACTGTaGGAGAGTGAGCCTGTCTTGTGGGGAGCTGGTGCCATCGTCGTC +
Preference number: 5 (lower is better)
Translates to: KVGLAIVFQQLLLEL*ESEPVLWGAGAIVV
Trigger: GACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS GCA 90 bp CTCCATGCGCACTTCCACGCTGCTGCGGTTCTTCAGGGCATCCGTTaGCGGTGTCAACAACACGTCTGTCATTTGTTTTACCATGGTCCA +
Preference number: 5 (lower is better)
Translates to: LHAHFHAAAVLQGIR*RCQQHVCHLFYHGP
Trigger: TGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
CDS GCA 90 bp AGCATGGCAGCGCAGCCGCTCCATGCGGAAAAGAAAGGCAACTGCTaGTTCAAACTGCGCTGTCAGGAACAGGACTTGGAAGTAGAGGAA +
Preference number: 5 (lower is better)
Translates to: SMAAQPLHAEKKGNC*FKLRCQEQDLEVEE
Trigger: TTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS CCA 90 bp ATTCGCTGTTTCACTTGCTCCCACTCAACCAACATTGACTCCCGATaGTACTCCTCAGCCATGCCGAAGGTCCTCTTCCGGGACTCTTCG +
Preference number: 5 (lower is better)
Translates to: IRCFTCSHSTNIDSR*YSSAMPKVLFRDSS
Trigger: CGAAGAGTCCCGGAAGAGGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000566315.5
ENST00000566678.1
ENST00000567641.5
ENST00000568283.5
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 90 bp ATCTTTCTCATCCCTGAGGAAATAGAAGTACTGGAGGGCCTCCCTTaGGTCCGTGGACTCAAACTTCCGGGTGTACAGCATGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: IFLIPEEIEVLEGLP*VRGLKLPGVQHEEP
Trigger: CGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569842.5
CDS CCA 90 bp CTCCATCTGCACCAGCCTCGCATTGGTGTCCCCAGACGTTCGGTATaGTATCATTCCAGCAAAGGTAATCAGAGTGCGGGCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: LHLHQPRIGVPRRSV*YHSSKGNQSAGLTS
Trigger: CGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
ENST00000569322.1
ENST00000569842.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACCCACTCAACCAACATaGACTCCCGATGGTACTCCT +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAPTQPT*TPDGTP
Trigger: AGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGCTTGGCTCGCTTTCTaGAGTAAAGTCAAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAAWLAF*SKVKGV
Trigger: GACGCCCTTGACTTTACTCAAGAAAGCGAGCCAAGC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGGAAACTTCGAACCAATaGGTAAGTCCCAGGCACCCC +
Preference number: 5 (lower is better)
Translates to: PQAASFLEHGILPISSSWETSNQ*VSPRHP
Trigger: GGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTC...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGTCGTCAAAACACACTaGGTTCAACTTCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSVVKTH*VQLQPQ
Trigger: CTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGAC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCAAGGTCATACAGCTTaGCTGCCTCTTCAAACAGTC +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSQGHTA*LPLQTV
Trigger: GACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAACAGGGCTCAGCAGTTaGTTCATCAGCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMATGLSS*FISSST
Trigger: GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTTCTTCAGCCTCTCCTaGTTGGATTGCGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: DPLGILTFCWERVYLREPFFSLS*LDCGAL
Trigger: CAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAA...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAGCACTTCTGAGAGGTaGTGCCTGATTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSTSER*CLISSL
Trigger: CAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGTGCACCAGCCTCGCATaGGTGTCCCCAGACGTTCGG +
Preference number: 5 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLECTSLA*VSPDVR
Trigger: CCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCA...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGATGCACCAGCCTCGCATaGGTGTCCCCAGACGTTCGG +
Preference number: 5 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGCTSLA*VSPDVR
Trigger: CCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCA...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCACCTTTGGGGACCCTTaGGGGATCTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGTFGDP*GILTFC
Trigger: GCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCCGGGGTTTCCCCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSIRGFPM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGGGGAAACCCCG...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCCTGATGTTGTGGCCTaGCAAATTCAGCCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSPDVVA*QIQPVS
Trigger: AGAAACAGGCTGAATTTGCAAGGCCACAACATCAGG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACCCTGATGTTGTGGCCTaGCAAATTCAGCCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNPDVVA*QIQPVS
Trigger: AGAAACAGGCTGAATTTGCAAGGCCACAACATCAGG...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS TCA 90 bp TGTGTGCAGAATTCGCTGTTTCACTTGCTCCCACTCAACCAACATTaGCTCCCGATGGTACTCCTCAGCCATGCCGAAGGTCCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: CVQNSLFHLLPLNQH*LPMVLLSHAEGPLP
Trigger: CGGAAGAGGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATTCTGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000566315.5
ENST00000566678.1
ENST00000567641.5
ENST00000568283.5
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS TCA 90 bp CAAAACCAGAAACCCCAGCCTAGTGGGCCCATGTGCCTGATGTACTaGCAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACTTAATT +
Preference number: 5 (lower is better)
Translates to: QNQKPQPSGPMCLMY*QCADPDSHKAWHLI
Trigger: AATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
ENST00000569322.1
ENST00000569842.5
CDS GCA 90 bp ACCAACATTGACTCCCGATGGTACTCCTCAGCCATGCCGAAGGTCTaGCAGAAAGGAACAGAGAACAATGACCCCTCTTCCGGGACTCTT +
Preference number: 5 (lower is better)
Translates to: TNIDSRWYSSAMPKV*QKGTENNDPSSGTL
Trigger: AAGAGTCCCGGAAGAGGGGTCATTGTTCTCTGTTCCTTTCTGGCAGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569595.5
CDS GCA 90 bp GCTCCCACTCAACCAACATTGACTCCCGATGGTACTCCTCAGCCATaGCGAAGGTCTGCCAGAAAGGAACAGAGAACAATGACCCCTCTT +
Preference number: 5 (lower is better)
Translates to: APTQPTLTPDGTPQP*RRSARKEQRTMTPL
Trigger: AAGAGGGGTCATTGTTCTCTGTTCCTTTCTGGCAGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569595.5
CDS CCA 90 bp CCTGAATGTCAGTGTCCTTCACAGGCTCAAGAGGCTCAAAGGTGGTaGCTGCACTCAGACTCTCCAATCGCTGGGAGATGTGGGATATGT +
Preference number: 5 (lower is better)
Translates to: PECQCPSQAQEAQRW*LHSDSPIAGRCGIC
Trigger: ACATATCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGAGCCTCTTGAGCCTGTGAAGGACACTGACATTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS-3UTR CAA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCCAAGGTCATACAGCTTaGCTGCCTCTTCAAACAGTC +
Preference number: 5 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGQGHTA*LPLQTV
Trigger: GACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTG...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCAGCACTTCTGAGAGGTaGTGCCTGATTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGSTSER*CLISSL
Trigger: CAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGAATCAGAGTGCGGGCTaGACTTCGGAGTTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: DPLGILTFCWERVYLREPNQSAG*TSELRV
Trigger: GACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATT...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGATCTGGATTCTGTACATaGCAGACTCAGCACGTGACC +
Preference number: 5 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRSGFCT*QTQHVT
Trigger: GGTCACGTGCTGAGTCTGCAATGTACAGAATCCAGA...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACACAGTGGCTGCCAAATaGTCCTTAAGAGGCTCTAAT +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNTVAAK*SLRGSN
Trigger: ATTAGAGCCTCTTAAGGACAATTTGGCAGCCACTGT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGGGGACTGCCAAGACTTaGTCAGGCCTGGGTCAACCC +
Preference number: 5 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEGTAKT*SGLGQP
Trigger: GGGTTGACCCAGGCCTGACAAAGTCTTGGCAGTCCC...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACTGCTGCAATGGAATCTaGGCTGATAAATACACGTGG +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNCCNGI*ADKYTW
Trigger: CCACGTGTATTTATCAGCCAAGATTCCATTGCAGCA...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAAGTCAGCCATCAGTTaGAAAGCACAAACTGATGGG +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSKSAIS*KAQTDG
Trigger: CCCATCAGTTTGTGCTTTCAAACTGATGGCTGACTT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAAATCAGAGTGCGGGCTaGACTTCGGAGTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMANQSAG*TSELFI
Trigger: GATGAACAACTCCGAAGTCAAGCCCGCACTCTGATT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569322.1
CDS TCA 90 bp AGCTCTGAGATGCCCTCAGTCTCAGCAGCAAGCTGTTCAGCTTGCTaGAGGAGCTCACCAAACCCCTCAGTATCCATTGGAGATGCAGAT +
Preference number: 5 (lower is better)
Translates to: SSEMPSVSAASCSAC*RSSPNPSVSIGDAD
Trigger: ATCTGCATCTCCAATGGATACTGAGGGGTTTGGTGAGCTCCTTCAGCAAGCTGAACAGCTTGCTGCTGAGACTGAGGGCATCTCAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000568656.5
ENST00000569842.5
CDS TCA 90 bp ACTCGCCATAGTCTTCCAACAACTGCTTCTGGAACTGTGAGAGAGTaGGCCTGTCTTGTGGGGAGCTGGTGCCATCGTCGTCAAAACACA +
Preference number: 5 (lower is better)
Translates to: TRHSLPTTASGTVRE*ACLVGSWCHRRQNT
Trigger: TGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS TCA 90 bp TGTGTGCAGAATTCGCTGTTTCACTTGCTCCCACTCAACCAACATTaGCTCCCGATGGTACTCCTCAGCCATGCCGAAGGTCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: CVQNSLFHLLPLNQH*LPMVLLSHAEGLPE
Trigger: TTCTGGCAGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATTCTGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569595.5
CDS GCA 90 bp AATGTCAGTGTCCTTCACAGGCTCAAGAGGCTCAAAGGTGGTGGCTaGACTCAGACTCTCCAATCGCTGGGAGATGTGGGATATGTCAAG +
Preference number: 5 (lower is better)
Translates to: NVSVLHRLKRLKGGG*TQTLQSLGDVGYVK
Trigger: CTTGACATATCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGAGCCTCTTGAGCCTGTGAAGGACACTGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS GCA 90 bp CTGTTCATGTACTCCTGGAACCAGGTTTTAAACTCTCCCAGCTGGTaGTGGGCTCGATTAACTACCTGTGAAGCGGCAAGCAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LFMYSWNQVLNSPSW*WARLTTCEAASRSP
Trigger: TGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS CCA 90 bp TTCATGTACTCCTGGAACCAGGTTTTAAACTCTCCCAGCTGGTGCTaGGCTCGATTAACTACCTGTGAAGCGGCAAGCAGGTCTCCACAG +
Preference number: 5 (lower is better)
Translates to: FMYSWNQVLNSPSWC*ARLTTCEAASRSPQ
Trigger: CTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS CCA 90 bp ATTCGCTGTTTCACTTGCTCCCACTCAACCAACATTGACTCCCGATaGTACTCCTCAGCCATGCCGAAGGTCTGCCAGAAAGGAACAGAG +
Preference number: 5 (lower is better)
Translates to: IRCFTCSHSTNIDSR*YSSAMPKVCQKGTE
Trigger: CTCTGTTCCTTTCTGGCAGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569595.5
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGAATTCGCTGTTTCACTaGCTCCCACTCAACCAACAT +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMNSLFH*LPLNQH
Trigger: ATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGACAATCTTCTGTCCTaGCTGTTCATGTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMADNLLS*LFMYSW
Trigger: CCAGGAGTACATGAACAGCAAGGACAGAAGATTGTC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAAACCTTGTCAGCATTCTaGGCAAGGTCATACAGCTTT +
Preference number: 5 (lower is better)
Translates to: MSGEGGRLSRGTDHQRRETLSAF*ARSYSF
Trigger: AAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGT...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGACCTTGTCAGCATTCTaGGCAAGGTCATACAGCTTT +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMTLSAF*ARSYSF
Trigger: AAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAGTCCACAAATTTATTaGCGCTTATTCCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSSPQIY*RLFLEP
Trigger: GGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAATCAGAGTGCGGGCTaGACTTCGGAGTTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSINQSAG*TSELRV
Trigger: GACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAATTTGGGGGATGGTCTaGGACCATCTGGACTTAAGT +
Preference number: 5 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRIWGMV*DHLDLS
Trigger: ACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAAT...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCATTATCTCCACTGGGATaGCAACAGAACGGCAAACTG +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMALSPLG*QQNGKL
Trigger: CAGTTTGCCGTTCTGTTGCAATCCCAGTGGAGATAA...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACGCAAACCACATCTCATaGTCTCATCTCAGAAATCGA +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNANHIS*SHLRNR
Trigger: TCGATTTCTGAGATGAGACAATGAGATGTGGTTTGC...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCACAGCATCACCATTCGTaGTGCGCTACACAAATTCAG +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAQHHHS*CATQIQ
Trigger: CTGAATTTGTGTAGCGCACAACGAATGGTGATGCTG...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS TCA 90 bp GTAGCTTGGCTCGCTTTCTTGAGTAAAGTCAAGGGCGTCTTCTCCTaGTGCCAGCAGTGTGTGCAGAATTCGCTGTTTCACTTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: VAWLAFLSKVKGVFS*CQQCVQNSLFHLLP
Trigger: TGGGAGCAAGTGAAACAGCGAATTCTGCACACACTGCTGGCATCAGGAGAAGACGCCCTTGACTTTACTCAAGAAAGCGAGCCAAGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000567641.5
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS TCA 90 bp CGGTCGATGCTGTCGATCACTGCAGCTCTTCCAAACCTTCTTATATaGGATGAGCTCTGTCGGAACCAGTGCTCAAGTTTTTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: RSMLSITAALPNLLI*DELCRNQCSSFSHP
Trigger: GGGGTGGGAAAAACTTGAGCACTGGTTCCGACAGAGCTCATCTCATATAAGAAGGTTTGGAAGAGCTGCAGTGATCGACAGCATCGACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564887.5
ENST00000566727.5
ENST00000569595.5
CDS GCA 90 bp CTGCCGGTTTTCTATTTGCTGAGGCCTTCATGGGCAGGTGAGAAATaGCAGGGAATTAGAACTCCATTGCACAACCCAGCAGCACTCAAG +
Preference number: 5 (lower is better)
Translates to: LPVFYLLRPSWAGEK*QGIRTPLHNPAALK
Trigger: CTTGAGTGCTGCTGGGTTGTGCAATGGAGTTCTAATTCCCTGGCATTTCTCACCTGCCCATGAAGGCCTCAGCAAATAGAAAACCGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563437.1
CDS CCA 90 bp TTGCTGTTCATGTACTCCTGGAACCAGGTTTTAAACTCTCCCAGCTaGTGCTGGGCTCGATTAACTACCTGTGAAGCGGCAAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LLFMYSWNQVLNSPS*CWARLTTCEAASRS
Trigger: AGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS CCA 90 bp TCCGTAGCTGGGGACAATCTTCTGTCCTTGCTGTTCATGTACTCCTaGAACCAGGTTTTAAACTCTCCCAGCTGGTGCTGGGCTCGATTA +
Preference number: 5 (lower is better)
Translates to: SVAGDNLLSLLFMYS*NQVLNSPSWCWARL
Trigger: TAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCACCCCTCAGTATCCATaGGAGATGCAGATCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSITPQYP*EMQILV
Trigger: CACAAGGATCTGCATCTCCAATGGATACTGAGGGGT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CAA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAAGGAGAACTGACGCCTaGACATCTGCCGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQRRTDA*TSAVSW
Trigger: CCAGGAGACGGCAGATGTCAAGGCGTCAGTTCTCCT...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCAACACGTCTGTCATTaGTTTTACCATGGTCCACAT +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMQHVCH*FYHGPH
Trigger: ATGTGGACCATGGTAAAACAAATGACAGACGTGTTG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGGACAATCTTCTGTCCTaGCTGTTCATGTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: DPLGILTFCWERVYLREPDNLLS*LFMYSW
Trigger: CCAGGAGTACATGAACAGCAAGGACAGAAGATTGTC...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAGCCACTTCACTCTGGTaGTCGGTGACGTCACATCTG +
Preference number: 5 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGATSLW*SVTSHL
Trigger: CAGATGTGACGTCACCGACAACCAGAGTGAAGTGGC...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGCCACTTCACTCTGGTaGTCGGTGACGTCACATCTG +
Preference number: 5 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSATSLW*SVTSHL
Trigger: CAGATGTGACGTCACCGACAACCAGAGTGAAGTGGC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGGTCGTCAAAACACACTaGGTTCAACTTCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: DPLGILTFCWERVYLREPVVKTH*VQLQPQ
Trigger: CTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGAC...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACCTCTCCTTGTTGGATaGCGGGGCACTGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTPLLVG*RGTDLG
Trigger: CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGG...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGTTCTTCAGCCTCTCCTaGTTGGATTGCGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEFFSLS*LDCGAL
Trigger: CAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAA...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCATTTGCGCTTATTCCTaGAGCCCTATACCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSIICAYS*SPIPFG
Trigger: GCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAAT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCAGTCCACAAATTTATTaGCGCTTATTCCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGSPQIY*RLFLEP
Trigger: GGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCATCAGAGCTGATGATTaGGGGGATGGTCTTGGACCA +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSIIRADD*GDGLGP
Trigger: TGGTCCAAGACCATCCCCCAAATCATCAGCTCTGAT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCACCTTTGGGGACCCTTaGGGGATCTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSITFGDP*GILTFC
Trigger: GCAGAATGTTAAGATCCCCAAAGGGTCCCCAAAGGT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TACAGAGGAGTGCAGTGGCAAGGTTTACCCCTTCCTCAAGTGCAAGCTGGGGGCAGCAGCACAGACCACTaGAAATCTCTTTTCAGAACA +
Preference number: 5 (lower is better)
Translates to: YRGVQWQGLPLPQVQAGGSSTDH*KSLFRT
Trigger: TGTTCTGAAAAGAGATTTCAAGTGGTCTGTGCTGCT...GCCCCCAGCTTGCACTTGAGGAAGGGGTAAACCTTGCCACTGCACTCCTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AACCAGCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGCACACAAAGAGGTTTaGAAATCATCTGCTGCAATG +
Preference number: 5 (lower is better)
Translates to: NQQSRPLPTVSRLQLAHSAHKEV*KSSAAM
Trigger: CATTGCAGCAGATGATTTCAAAACCTCTTTGTGTGC...TGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCGTCCTATATTTTTATTaGCTAAGTCTGACCCGGATG +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSVLYFY*LSLTRM
Trigger: CATCCGGGTCAGACTTAGCAAATAAAAATATAGGAC...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCCAGAAGGGTATTTTATaGTTAACGGACTGTACCAAG +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSQKGIL*LTDCTK
Trigger: CTTGGTACAGTCCGTTAACAATAAAATACCCTTCTG...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS TCA 90 bp TCAAGCTACCTCGCTTTCTTGAGTAAAGTCAAGGGCGTCTTCTCCTaGTGCCAGCAGTGTGTGCAGAATTCGCTGTTTCACTTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: SSYLAFLSKVKGVFS*CQQCVQNSLFHLLP
Trigger: TGGGAGCAAGTGAAACAGCGAATTCTGCACACACTGCTGGCATCAGGAGAAGACGCCCTTGACTTTACTCAAGAAAGCGAGGTAGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566678.1
CDS CCA 90 bp CATCCGTTGCCGGTGTCAACAACACGTCTGTCATTTGTTTTACCATaGTCCACATGTCGGAAATGCTCTTATCATCGAGCTCTGCGACGG +
Preference number: 5 (lower is better)
Translates to: HPLPVSTTRLSFVLP*STCRKCSYHRALRR
Trigger: CCGTCGCAGAGCTCGATGATAAGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 90 bp CCTGAGGGCCCTACGGTAATGCAGCCGGAGCTTGTTTTCCGTAGCTaGGGACAATCTACAGACATAAGGGAACAGACAGATAGATACATA +
Preference number: 5 (lower is better)
Translates to: PEGPTVMQPELVFRS*GQSTDIREQTDRYI
Trigger: TATGTATCTATCTGTCTGTTCCCTTATGTCTGTAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563437.1
CDS-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTGGAGATGCAGATCCTaGTGCTACAGCCGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNWRCRS*CYSRLR
Trigger: GCGGAGACGGCTGTAGCACAAGGATCTGCATCTCCA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308159.10
CDS-3UTR CAA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGCTTGGCTCGCTTTCTaGAGTAAAGTCAAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSAWLAF*SKVKGV
Trigger: GACGCCCTTGACTTTACTCAAGAAAGCGAGCCAAGC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGATTATAGATATAAATTaGCCGCGCATAGGCCATCTC +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMIIDIN*PRIGHL
Trigger: GAGATGGCCTATGCGCGGCAAATTTATATCTATAAT...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TGGGCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCAAACATGTTTTCTCCTaGACTATCTTTCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: WAHVPDVLTVCRPRLPQSKHVFS*TIFLIP
Trigger: AGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTT...GCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCCAAGGTCATACAGCTTaGCTGCCTCTTCAAACAGTC +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSIQGHTA*LPLQTV
Trigger: GACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTG...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAATTCAGCCTCTCCTTGTaGGATTGCGGGGCACTGATC +
Preference number: 5 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQFSLSL*DCGALI
Trigger: GATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAA...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAAGTCCACAAATTTATTaGCGCTTATTCCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMASPQIY*RLFLEP
Trigger: GGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAGAGGACATGGAGTGCTaGATATTTCACACACAAATC +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMAEDMEC*IFHTQI
Trigger: GATTTGTGTGTGAAATATCAAGCACTCCATGTCCTC...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAATCAGAGCTGATGATTaGGGGGATGGTCTTGGACCA +
Preference number: 5 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQIRADD*GDGLGP
Trigger: TGGTCCAAGACCATCCCCCAAATCATCAGCTCTGAT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAACCGATAAGCAGCAGTaGGTTCCATTATCTACAGAT +
Preference number: 5 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRTDKQQ*VPLSTD
Trigger: ATCTGTAGATAATGGAACCAACTGCTGCTTATCGGT...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCAGAGCAGACCACTGCCCACTGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAGTCAGTACTTTCCTTaGAGTGTTTCAGTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: AEQTTAHCLKAPVGPFRNSQYFP*SVSVSL
Trigger: TAAACTCACTGAAACACTCAAAGGAAAGTACTGACT...GTTCCTGAATGGGCCAACTGGAGCCTTGAGACAGTGGGCAGTGGTCTGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAGGGACTGCCAAGACTTaGTCAGGCCTGGGTCAACCC +
Preference number: 5 (lower is better)
Translates to: NLLATDRDSGEGTILNRVGTAKT*SGLGQP
Trigger: GGGTTGACCCAGGCCTGACAAAGTCTTGGCAGTCCC...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAGCACACAAAGAGGTTTaGAAATCATCTGCTGCAATG +
Preference number: 5 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRAHKEV*KSSAAM
Trigger: CATTGCAGCAGATGATTTCAAAACCTCTTTGTGTGC...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAAGTCCTATATTTTTATTaGCTAAGTCTGACCCGGATG +
Preference number: 5 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREVLYFY*LSLTRM
Trigger: CATCCGGGTCAGACTTAGCAAATAAAAATATAGGAC...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAATTCGCTGTTTCACTaGCTCCCACTCAACCAACAT +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSINSLFH*LPLNQH
Trigger: ATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp ACCTTAATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAATTATAGATATAAATTaGCCGCGCATAGGCCATCTC +
Preference number: 5 (lower is better)
Translates to: TLMSGEGGRLSRGTDHQRIIDIN*PRIGHL
Trigger: GAGATGGCCTATGCGCGGCAAATTTATATCTATAAT...TCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCATTAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATTCTTCAGGGCATCCGTaGCCGGTGTCAACAACACGT +
Preference number: 5 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNSSGHP*PVSTTR
Trigger: ACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGA...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp ATGAGTGGGGAAGGGGGTCGTCTGAGCAGAGGAACTGACCACCAGAGAAGGGAAAAACATGTTTTCTCCTaGACTATCTTTCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: MSGEGGRLSRGTDHQRREKHVFS*TIFLIP
Trigger: AGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTT...TTCCCTTCTCTGGTGGTCAGTTCCTCTGCTCAGACGACCCCCTTCCCCACTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTTCAGCCTCTCCTTGTaGGATTGCGGGGCACTGATC +
Preference number: 5 (lower is better)
Translates to: SSSKLRISVISDAHKSTNFSLSL*DCGALI
Trigger: GATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTATTTGCGCTTATTCCTaGAGCCCTATACCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSICAYS*SPIPFG
Trigger: GCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAAT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAAGCACTTCTGAGAGGTaGTGCCTGATTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQSTSER*CLISSL
Trigger: CAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CTCTGCACAATTCCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAATTTGGGGGATGGTCTaGGACCATCTGGACTTAAGT +
Preference number: 5 (lower is better)
Translates to: LCTIPEACAQSHNQLVGQIWGMV*DHLDLS
Trigger: ACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAAT...TTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGGAATTGTGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATGCAAGCTGGGGGCACTaGCAACCTTCCTTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDASWGH*QPSFLR
Trigger: CCTTAAGAAGGAAGGTTGCAAGTGCCCCCAGCTTGC...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAGCAAGCTGGGGGCACTaGCAACCTTCCTTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTASWGH*QPSFLR
Trigger: CCTTAAGAAGGAAGGTTGCAAGTGCCCCCAGCTTGC...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCCCATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGCTTGAGCCTTCTCATTaGTGGCATTGTTATATTTCT +
Preference number: 5 (lower is better)
Translates to: AHVPDVLTVCRPRLPQSMLEPSH*WHCYIS
Trigger: AGAAATATAACAATGCCACAAATGAGAAGGCTCAAG...CATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS TCA 90 bp GATGCTGTCGATCACTGCAGCTCTTCCAAACCTTCTTATATGAGATaGGCTCTGTCGGAACCAGTGCTCAAGTTTTTCCCACCCCAAACT +
Preference number: 5 (lower is better)
Translates to: DAVDHCSSSKPSYMR*ALSEPVLKFFPPQT
Trigger: AGTTTGGGGTGGGAAAAACTTGAGCACTGGTTCCGACAGAGCTCATCTCATATAAGAAGGTTTGGAAGAGCTGCAGTGATCGACAGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564887.5
ENST00000566727.5
ENST00000569595.5
CDS CCA 90 bp CATCCGTTGCCGGTGTCAACAACACGTCTGTCATTTGTTTTACCATaGTCCACATGTCGGAAATGCTCTTATCATCGAGCTCAAACCCCT +
Preference number: 5 (lower is better)
Translates to: HPLPVSTTRLSFVLP*STCRKCSYHRAQTP
Trigger: AGGGGTTTGAGCTCGATGATAAGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563858.5
CDS-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACCCCACTCAACCAACATaGACTCCCGATGGTACTCCT +
Preference number: 5 (lower is better)
Translates to: SSSKLRISVISDAHKSTNPTQPT*TPDGTP
Trigger: AGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGG...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGGCACAGGAGGACAAAGCAAAGCATCTGCTCATTCAAATATCTGCTGAGCAATGAAACTTCGAACCAATaGGTAAGTCCCAGGCACCCC +
Preference number: 5 (lower is better)
Translates to: WHRRTKQSICSFKYLLSNETSNQ*VSPRHP
Trigger: GGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTC...ATTGCTCAGCAGATATTTGAATGAGCAGATGCTTTGCTTTGTCCTCCTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CATGTGCCTGATGTACTGACAGTGTGCCGACCCAGACTCCCACAAAGCATGGCAACAGAAGCAACTTTGTaGATAATAGGCTTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: HVPDVLTVCRPRLPQSMATEATL*IIGFVS
Trigger: TGACACAAAGCCTATTATCAACAAAGTTGCTTCTGT...TGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
CDS-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAACAGGGCTCAGCAGTTaGTTCATCAGCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTTGLSS*FISSST
Trigger: GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGT...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CAGACTTCACAGATCAACCAGAAACCTGTTTCTCCCAAGAACATGTCAATCACTTTCAGCCTCTCCTTGTaGGATTGCGGGGCACTGATC +
Preference number: 5 (lower is better)
Translates to: QTSQINQKPVSPKNMSITFSLSL*DCGALI
Trigger: GATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAA...AGTGATTGACATGTTCTTGGGAGAAACAGGTTTCTGGTTGATCTGTGAAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR CAA 90 bp CAGACTTCACAGATCAACCAGAAACCTGTTTCTCCCAAGAACATGTCAATCACTTTCTTCAGCCTCTCCTaGTTGGATTGCGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: QTSQINQKPVSPKNMSITFFSLS*LDCGAL
Trigger: CAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAA...AGTGATTGACATGTTCTTGGGAGAAACAGGTTTCTGGTTGATCTGTGAAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR CAA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTTCTAGTAAAGCTCAATaGAAGACAGTCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: PEACAQSHNQLVGQELGFSSKAQ*KTVLQG
Trigger: ACCCTGGAGGACTGTCTTCAATTGAGCTTTACTAGA...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCTCAGGCCGCATCCTTCCTGGAACATGGAATCCTACCGATAAGCAGCAGTTGGATGTATTTAAACAACTaGAGCCTTCTCATTTGTGGC +
Preference number: 5 (lower is better)
Translates to: PQAASFLEHGILPISSSWMYLNN*SLLICG
Trigger: GCCACAAATGAGAAGGCTCAAGTTGTTTAAATACAT...CCAACTGCTGCTTATCGGTAGGATTCCATGTTCCAGGAAGGATGCGGCCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGCATGACAACCTGATGTaGTGGCCTTGCAAATTCAGC +
Preference number: 5 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEHDNLM*WPCKFS
Trigger: GCTGAATTTGCAAGGCCACAACATCAGGTTGTCATG...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GACCCTTTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTTGTTGCTGTTGTTGTaGAGCCAAAAGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: DPLGILTFCWERVYLREPLLLLL*SQKKRI
Trigger: GATTCTCTTCTTTTGGCTCAACAACAACAGCAACAA...CGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGATGGCATGCTGGAAATTaGGCAAGTGATGTGAACCAC +
Preference number: 5 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGWHAGN*ASDVNH
Trigger: GTGGTTCACATCACTTGCCAAATTTCCAGCATGCCA...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCAGAGGCCTGTGCTCAATCGCACAATCAGCTTGTAGGACAAGAACTGGGATTTAGCCCTGAGTCTCATTaGATCCTGGGAGACATTATT +
Preference number: 5 (lower is better)
Translates to: PEACAQSHNQLVGQELGFSPESH*ILGDII
Trigger: AATAATGTCTCCCAGGATCAAATGAGACTCAGGGCT...AAATCCCAGTTCTTGTCCTACAAGCTGATTGTGCGATTGAGCACAGGCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS GCA 90 bp ATGAAGGCGCTGGCATCCACCCACTTCAGACAAAGGGAAATAATTTaGAACTGTACCAAGGCGTGGATAATTGAGTCATCTCCCATACAG +
Preference number: 5 (lower is better)
Translates to: MKALASTHFRQREII*NCTKAWIIESSPIQ
Trigger: CTGTATGGGAGATGACTCAATTATCCACGCCTTGGTACAGTTGCAAATTATTTCCCTTTGTCTGAAGTGGGTGGATGCCAGCGCCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS-3UTR CAA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTAATTCGCTGTTTCACTaGCTCCCACTCAACCAACAT +
Preference number: 5 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSNSLFH*LPLNQH
Trigger: ATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCTCTTCAGGGCATCCGTaGCCGGTGTCAACAACACGT +
Preference number: 5 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCSSGHP*PVSTTR
Trigger: ACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGA...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTGCCTCTCCTTGTTGGATaGCGGGGCACTGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: RIVLVFLYTTNILATAPLPLLVG*RGTDLG
Trigger: CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGG...CAAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp AAGCGGATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTCCTCTCCTTGTTGGATaGCGGGGCACTGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: KRIIEELNQTSQINQKPVPLLVG*RGTDLG
Trigger: CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGG...AACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATCCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR CAA 90 bp GTCCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCTTCAGCCTCTCCTTGTaGGATTGCGGGGCACTGATC +
Preference number: 5 (lower is better)
Translates to: VPGLYLSFFIQQTYWQQLFSLSL*DCGALI
Trigger: GATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAA...GAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACATCTGGATTCTGTACATaGCAGACTCAGCACGTGACC +
Preference number: 5 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTSGFCT*QTQHVT
Trigger: GGTCACGTGCTGAGTCTGCAATGTACAGAATCCAGA...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTACACTTTCTCCCAATTaGCTGACACAGGGCTCAATT +
Preference number: 5 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSTLSPN*LTQGSI
Trigger: AATTGAGCCCTGTGTCAGCAAATTGGGAGAAAGTGT...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTGGGGATCTTAACATTCTGCTGGGAAAGAGTCTACCTCAGGGAGCCGTCCATCAGAAAAGGCTGTACTTaGGCTCTTTCCTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LGILTFCWERVYLREPSIRKGCT*ALSFLS
Trigger: AGAAAGAAAGGAAAGAGCCAAAGTACAGCCTTTTCT...GATGGACGGCTCCCTGAGGTAGACTCTTTCCCAGCAGAATGTTAAGATCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS GCA 90 bp GGAAGCCCTGCAGCTCTTAAATTTAAGGAGTTACAGAACGGTCGATaGTGTCGATCACTGCAGCTCTTCCAAACCTTCTTATATGAGATG +
Preference number: 5 (lower is better)
Translates to: GSPAALKFKELQNGR*CRSLQLFQTFLYEM
Trigger: CATCTCATATAAGAAGGTTTGGAAGAGCTGCAGTGATCGACAGCATCGACCGTTCTGTAACTCCTTAAATTTAAGAGCTGCAGGGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564887.5
ENST00000566727.5
ENST00000569595.5
CDS-3UTR CAA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGCAACACGTCTGTCATTaGTTTTACCATGGTCCACAT +
Preference number: 5 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEQHVCH*FYHGPH
Trigger: ATGTGGACCATGGTAAAACAAATGACAGACGTGTTG...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACGTCGTCAAAACACACTaGGTTCAACTTCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: SSSKLRISVISDAHKSTNVVKTH*VQLQPQ
Trigger: CTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGAC...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAACCTTGTCAGCATTCTaGGCAAGGTCATACAGCTTT +
Preference number: 5 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQTLSAF*ARSYSF
Trigger: AAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGT...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTACAGGGCTCAGCAGTTaGTTCATCAGCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: PRIVLVFLYTTNILATAPTGLSS*FISSST
Trigger: GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGT...AGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp CCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTTCTTCAGCCTCTCCTaGTTGGATTGCGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: PGLYLSFFIQQTYWQQLLFFSLS*LDCGAL
Trigger: CAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAA...AAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp TGTCTCAAGGCTCCAGTTGGCCCATTCAGGAACAAACACGACCTAATTTGCTCTGAGGACATGGAGTGCTaGATATTTCACACACAAATC +
Preference number: 5 (lower is better)
Translates to: CLKAPVGPFRNKHDLICSEDMEC*IFHTQI
Trigger: GATTTGTGTGTGAAATATCAAGCACTCCATGTCCTC...AGAGCAAATTAGGTCGTGTTTGTTCCTGAATGGGCCAACTGGAGCCTTGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACATGACAACCTGATGTaGTGGCCTTGCAAATTCAGC +
Preference number: 5 (lower is better)
Translates to: ALQNCVSQSFPMPTKAQTHDNLM*WPCKFS
Trigger: GCTGAATTTGCAAGGCCACAACATCAGGTTGTCATG...TGTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATGGAAGATGGGAAGACTaGTGGATTCAGCGTAGGATA +
Preference number: 5 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDGRWED*WIQRRI
Trigger: TATCCTACGCTGAATCCACAAGTCTTCCCATCTTCC...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS TCA 90 bp CAGACAAAGGGAAATAATTTGCAACTGTACCAAGGCGTGGATAATTaGGTCATCTCCCATACAGGGTCAGTGTTAGAGGTTTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: QTKGNNLQLYQGVDN*VISHTGSVLEVSSI
Trigger: GATGGAGGAAACCTCTAACACTGACCCTGTATGGGAGATGACTCAATTATCCACGCCTTGGTACAGTTGCAAATTATTTCCCTTTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS GCA 90 bp GATCAAGTCCAAAAGAAGATAGAACGTGGAGTCCACAAATTTATTTaGGCTTATTCCTTGAGCCCTATACCGTTCGGCAATGGAGAGTGC +
Preference number: 5 (lower is better)
Translates to: DQVQKKIERGVHKFI*AYSLSPIPFGNGEC
Trigger: GCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563405.1
ENST00000563486.1
ENST00000564887.5
ENST00000569842.5
CDS-3UTR CAA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCGACAATCTTCTGTCCTaGCTGTTCATGTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLDNLLS*LFMYSW
Trigger: CCAGGAGTACATGAACAGCAAGGACAGAAGATTGTC...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCGAAGTAGAGGAAGGGTaGCTGGTTCACCGTAAAGTG +
Preference number: 5 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCEVEEG*LVHRKV
Trigger: CACTTTACGGTGAACCAGCAACCCTTCCTCTACTTC...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTATTATCTCCACTGGGATaGCAACAGAACGGCAAACTG +
Preference number: 5 (lower is better)
Translates to: NLLATDRDSGEGTILNRVLSPLG*QQNGKL
Trigger: CAGTTTGCCGTTCTGTTGCAATCCCAGTGGAGATAA...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATACAGTGGCTGCCAAATaGTCCTTAAGAGGCTCTAAT +
Preference number: 5 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDTVAAK*SLRGSN
Trigger: ATTAGAGCCTCTTAAGGACAATTTGGCAGCCACTGT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACACACTTTCTCCCAATTaGCTGACACAGGGCTCAATT +
Preference number: 5 (lower is better)
Translates to: SSSKLRISVISDAHKSTNTLSPN*LTQGSI
Trigger: AATTGAGCCCTGTGTCAGCAAATTGGGAGAAAGTGT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GACAACCTGATGTTGTGGCCTTGCAAATTCAGCCTGTTTCTCATCTCTGCACAAAGCAGCACAGACCACTaGAAATCTCTTTTCAGAACA +
Preference number: 5 (lower is better)
Translates to: DNLMLWPCKFSLFLISAQSSTDH*KSLFRT
Trigger: TGTTCTGAAAAGAGATTTCAAGTGGTCTGTGCTGCT...TTGTGCAGAGATGAGAAACAGGCTGAATTTGCAAGGCCACAACATCAGGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACTGCTGCAATGGAATCTaGGCTGATAAATACACGTGG +
Preference number: 5 (lower is better)
Translates to: SSSKLRISVISDAHKSTNCCNGI*ADKYTW
Trigger: CCACGTGTATTTATCAGCCAAGATTCCATTGCAGCA...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAGCCCTGAGTCTCATTaGATCCTGGGAGACATTATT +
Preference number: 5 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDSPESH*ILGDII
Trigger: AATAATGTCTCCCAGGATCAAATGAGACTCAGGGCT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGAACAGAAGCAACTTTGTaGATAATAGGCTTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGTEATL*IIGFVS
Trigger: TGACACAAAGCCTATTATCAACAAAGTTGCTTCTGT...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTATTTGCGCTTATTCCTaGAGCCCTATACCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: PGLYLSFFIQQTYWQQLLICAYS*SPIPFG
Trigger: GCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAAT...AAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCTCTAGTAAAGCTCAATaGAAGACAGTCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLSSKAQ*KTVLQG
Trigger: ACCCTGGAGGACTGTCTTCAATTGAGCTTTACTAGA...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GATGATTTGGGGGATGGTCTTGGACCATCTGGACTTAAGTCACACTCTCTAGAGTTTTTGTTGCTGTTGTaGTTGAGCCAAAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: DDLGDGLGPSGLKSHSLEFLLLL*LSQKKR
Trigger: TCTCTTCTTTTGGCTCAACAACAACAGCAACAAAAA...CTCTAGAGAGTGTGACTTAAGTCCAGATGGTCCAAGACCATCCCCCAAATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTTTCTGACTCAGCATTCAGCATGCTCAAGTCACTTCCTGAGTGGCATGCTGGATTTTTGTTGCTGTTGTaGTTGAGCCAAAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: FSDSAFSMLKSLPEWHAGFLLLL*LSQKKR
Trigger: TCTCTTCTTTTGGCTCAACAACAACAGCAACAAAAA...TCCAGCATGCCACTCAGGAAGTGACTTGAGCATGCTGAATGCTGAGTCAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCGGAAGATGGGAAGACTaGTGGATTCAGCGTAGGATA +
Preference number: 5 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCGRWED*WIQRRI
Trigger: TATCCTACGCTGAATCCACAAGTCTTCCCATCTTCC...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATACAAAGGGAAATAATTaGCAACTGTACCAAGGCGTG +
Preference number: 5 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDTKGNN*QLYQGV
Trigger: CACGCCTTGGTACAGTTGCAAATTATTTCCCTTTGT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS-3UTR CAA 90 bp GTCCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCACCTTGTCAGCATTCTaGGCAAGGTCATACAGCTTT +
Preference number: 5 (lower is better)
Translates to: VPGLYLSFFIQQTYWQQLTLSAF*ARSYSF
Trigger: AAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGT...GAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp AAGCGGATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTATTTGCGCTTATTCCTaGAGCCCTATACCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: KRIIEELNQTSQINQKPVICAYS*SPIPFG
Trigger: GCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAAT...AACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATCCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR CAA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATTTGTTGCTGTTGTTGTaGAGCCAAAAGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDLLLLL*SQKKRI
Trigger: GATTCTCTTCTTTTGGCTCAACAACAACAGCAACAA...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS TCA 90 bp CTTAAACTGTGTGAACAAGATGTTCATGGTGGCAAGAAGCACTTCTaGGAGGTTGTGCCTGATCTACATAGAGAGAAAAACAGAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LKLCEQDVHGGKKHF*EVVPDLHREKNRVK
Trigger: CTTTACTCTGTTTTTCTCTCTATGTAGATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563465.1
CDS TCA 90 bp CATTCGTTGTGCGCTACACAAATTCAGAGAAGTCAGCCATCAGTTTaGAAGCACAAACTGATGGGAGTAACAGTTTATAGGTTACAGAAG +
Preference number: 5 (lower is better)
Translates to: HSLCATQIQRSQPSV*KHKLMGVTVYRLQK
Trigger: CTTCTGTAACCTATAAACTGTTACTCCCATCAGTTTGTGCTTTCAAACTGATGGCTGACTTCTCTGAATTTGTGTAGCGCACAACGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS-3UTR CAA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCCAACACGTCTGTCATTaGTTTTACCATGGTCCACAT +
Preference number: 5 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCQHVCH*FYHGPH
Trigger: ATGTGGACCATGGTAAAACAAATGACAGACGTGTTG...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AGCTCTTCAAAACTGCGTATCTCAGTCATTTCCGATGCCCACAAAAGCACAAACAAACATGTTTTCTCCTaGACTATCTTTCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: SSSKLRISVISDAHKSTNKHVFS*TIFLIP
Trigger: AGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTT...GTTTGTGCTTTTGTGGGCATCGGAAATGACTGAGATACGCAGTTTTGAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTTTGTCAAGGTCATACAGCTTaGCTGCCTCTTCAAACAGTC +
Preference number: 5 (lower is better)
Translates to: GLYLSFFIQQTYWQQLLCQGHTA*LPLQTV
Trigger: GACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTG...ACAAAGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp TCCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCAGTCCACAAATTTATTaGCGCTTATTCCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: SQDCTCLSLYNKHTGNSSSPQIY*RLFLEP
Trigger: GGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACT...GGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp CCTGGCCCAACATCTAAGGAAAGAGTTAGTTCTCTGAAAAAGTGGGCTGAAGATAGTCAGTACTTTCCTTaGAGTGTTTCAGTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: PGPTSKERVSSLKKWAEDSQYFP*SVSVSL
Trigger: TAAACTCACTGAAACACTCAAAGGAAAGTACTGACT...ATCTTCAGCCCACTTTTTCAGAGAACTAACTCTTTCCTTAGATGTTGGGCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCGTTTTCCCTCTGAAGTaGGGGAGTCAAAGAGTTTTT +
Preference number: 5 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCVFPLK*GSQRVF
Trigger: AAAAACTCTTTGACTCCCCAACTTCAGAGGGAAAAC...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp AATTTACTGGCTACAGACAGGGATAGTGGTGAAGGAACCATCCTAAACAGAGTAAGAAAAGGCTGTACTTaGGCTCTTTCCTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: NLLATDRDSGEGTILNRVRKGCT*ALSFLS
Trigger: AGAAAGAAAGGAAAGAGCCAAAGTACAGCCTTTTCT...TACTCTGTTTAGGATGGTTCCTTCACCACTATCCCTGTCTGTAGCCAGTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS GCA 90 bp AAGGTCATACAGCTTTGCTGCCTCTTCAAACAGTCCTTTATTTTCTaGCACAGAAGCAACTTTGTTGATAATAGGCTTTGTGTCACTAGT +
Preference number: 5 (lower is better)
Translates to: KVIQLCCLFKQSFIF*HRSNFVDNRLCVTS
Trigger: ACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569842.5
CDS-3UTR CAA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCATTATAGATATAAATTaGCCGCGCATAGGCCATCTC +
Preference number: 5 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCIIDIN*PRIGHL
Trigger: GAGATGGCCTATGCGCGGCAAATTTATATCTATAAT...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCACAGAAGCAACTTTGTaGATAATAGGCTTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLTEATL*IIGFVS
Trigger: TGACACAAAGCCTATTATCAACAAAGTTGCTTCTGT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp TTCAGTGAGTTTATTATGAGCCATTCTGAGACAGGAACAAACCCTGACAGTCTCATGTATTTAAACAACTaGAGCCTTCTCATTTGTGGC +
Preference number: 5 (lower is better)
Translates to: FSEFIMSHSETGTNPDSLMYLNN*SLLICG
Trigger: GCCACAAATGAGAAGGCTCAAGTTGTTTAAATACAT...GAGACTGTCAGGGTTTGTTCCTGTCTCAGAATGGCTCATAATAAACTCACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS-3UTR CAA 90 bp CCCAGGATTGTACTTGTCTTTCTTTATACAACAAACATACTGGCAACAGCTCCTACAGAAGCAACTTTGTaGATAATAGGCTTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: PRIVLVFLYTTNILATAPTEATL*IIGFVS
Trigger: TGACACAAAGCCTATTATCAACAAAGTTGCTTCTGT...AGGAGCTGTTGCCAGTATGTTTGTTGTATAAAGAAAGACAAGTACAATCCTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS-3UTR CAA 90 bp AAGCGGATAATAGAAGAATTAAACCAGACTTCACAGATCAACCAGAAACCTGTTAGTCCACAAATTTATTaGCGCTTATTCCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: KRIIEELNQTSQINQKPVSPQIY*RLFLEP
Trigger: GGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACT...AACAGGTTTCTGGTTGATCTGTGAAGTCTGGTTTAATTCTTCTATTATCCGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563486.1
CDS-3UTR CAA 90 bp GGAACCATCCTAAACAGAGTAAATGCAGAAGTTACTGTACAGAAAGGAACATGCCTTGAGCCTTCTCATTaGTGGCATTGTTATATTTCT +
Preference number: 5 (lower is better)
Translates to: GTILNRVNAEVTVQKGTCLEPSH*WHCYIS
Trigger: AGAAATATAACAATGCCACAAATGAGAAGGCTCAAG...GCATGTTCCTTTCTGTACAGTAACTTCTGCATTTACTCTGTTTAGGATGGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000542526.5
CDS TCA 90 bp GAATTTTCGAGGGTGTACATTAACCTGCACTTCAAACACCTTTCCTaGAACTTACATCAAAAGCTCTATCAATATGACCACTATGATACT +
Preference number: 5 (lower is better)
Translates to: EFSRVYINLHFKHLS*NLHQKLYQYDHYDT
Trigger: AGTATCATAGTGGTCATATTGATAGAGCTTTTGATGTAAGTTTCAGGAAAGGTGTTTGAAGTGCAGGTTAATGTACACCCTCGAAAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563405.1
CDS TCA 72 bp TGTGCTACAGCCGTCTCCGCCGCTCAGGTGCCGGCTTaGGGACGCGGCCGCCGCTTCTCGCGCCGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: CATAVSAAQVPA*GRGRRFSRRSP
Trigger: GGGAGAGCGGCGCGAGAAGCGGCGGCCGCGTCCTCAAGCCGGCACCTGAGCGGCGGAGACGGCTGTAGCACA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000563858.5
ENST00000566315.5
ENST00000569842.5
CDS CAA 72 bp TTGTGCTACAGCCGTCTCCGCCGCTCAGGTGCCGGCTaGAGGACGCGGCCGCCGCTTCTCGCGCCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LCYSRLRRSGAG*RTRPPLLAPLS
Trigger: GGAGAGCGGCGCGAGAAGCGGCGGCCGCGTCCTCAAGCCGGCACCTGAGCGGCGGAGACGGCTGTAGCACAA
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000563858.5
ENST00000566315.5
ENST00000569842.5
CDS CAA 90 bp TGCAGATCCTTGTGCTACAGCCGTCTCCGCCGCTCAGGTGCCGGCTaGAGGACGCGGCCGCCGCTTCTCGCGCCGCTCTCCCCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: CRSLCYSRLRRSGAG*RTRPPLLAPLSPAS
Trigger: GGAAGCGGGGGAGAGCGGCGCGAGAAGCGGCGGCCGCGTCCTCAAGCCGGCACCTGAGCGGCGGAGACGGCTGTAGCACAAGGATCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308159.10
ENST00000563858.5
ENST00000569842.5
CDS CAA 90 bp CATGCAACCTTGTGCTACAGCCGTCTCCGCCGCTCAGGTGCCGGCTaGAGGACGCGGCCGCCGCTTCTCGCGCCGCTCTCCCCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: HATLCYSRLRRSGAG*RTRPPLLAPLSPAS
Trigger: GGAAGCGGGGGAGAGCGGCGCGAGAAGCGGCGGCCGCGTCCTCAAGCCGGCACCTGAGCGGCGGAGACGGCTGTAGCACAAGGTTGCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566315.5
CDS TCA 72 bp TGGGCAACAGAGCCAGGCCAGAGTCGCGGTCCTCGATaGCTCGCTGGGGCCTGGATGACGAGGATGGACTTG +
Preference number: 6 (lower is better)
Translates to: WATEPGQSRGPR*LAGAWMTRMDL
Trigger: CAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCTGTTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569842.5
CDS CCA 72 bp CCGAGGAGAACTGACGCCTTGACATCTGCCGTCTCCTaGGACGTGCGTGTTAGGGTACGGGAACGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: PRRTDALTSAVS*DVRVRVRERRR
Trigger: GCGCCTGCGTTCCCGTACCCTAACACGCACGTCCCAGGAGACGGCAGATGTCAAGGCGTCAGTTCTCCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
CDS TCA 72 bp GGGCTTGACTTCGGAGTTGAGAGTCGCGGTCCTCGATaGCTCGCTGGGGCCTGGATGACGAGGATGGACTTG +
Preference number: 6 (lower is better)
Translates to: GLDFGVESRGPR*LAGAWMTRMDL
Trigger: CAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
CDS CCA 72 bp GTTAGGGTACGGGAACGCAGGCGCTCTCCCGCCTGCTaGATCTCCTGTAAGTTCCGTTCCACATGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: VRVRERRRSPAC*ISCKFRSTWGS
Trigger: GCTTCCCCATGTGGAACGGAACTTACAGGAGATCCAGCAGGCGGGAGAGCGCCTGCGTTCCCGTACCCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000568656.5
ENST00000569842.5
CDS TCA 72 bp TTGGGTCCGTGGACTCAAACTTCCGGGTGTACAGCATaGGGAGCCGCACGAAGTTCAGCCGCCGCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: LGPWTQTSGCTA*GAARSSAAASK
Trigger: CTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569842.5
CDS GCA 72 bp GAGAGTGCCATGTTCTTCAGCCTCTCCTTGTTGGATTaGGGGGCACTGATCTGGGGGACGACAGGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: ESAMFFSLSLLD*GALIWGTTGLS
Trigger: GCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563405.1
ENST00000563486.1
ENST00000564887.5
ENST00000569842.5
CDS TCA 72 bp CTCTCCCAGCTGGTGCTGGGCTCGATTAACTACCTGTaGAGCGGCAAGCAGGTCTCCACAGCGCATGCAGTA +
Preference number: 6 (lower is better)
Translates to: LSQLVLGSINYL*SGKQVSTAHAV
Trigger: TACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS TCA 72 bp AGAGTCGCGGTCCTCGATGACTCGCTGGGGCCTGGATaGCGAGGATGGACTTGTCCCCTTGAGCCTCTTAAA +
Preference number: 6 (lower is better)
Translates to: RVAVLDDSLGPG*RGWTCPLEPLK
Trigger: TTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
ENST00000569842.5
CDS TCA 72 bp TATCCAGAGAGCTTCGACCAGGGGGTCCCACATCACTaGTGTAGCTTGGCCTCTTCCGGGACTCTTCGATGG +
Preference number: 6 (lower is better)
Translates to: YPESFDQGVPHH*CSLASSGTLRW
Trigger: CCATCGAAGAGTCCCGGAAGAGGCCAAGCTACATCAGTGATGTGGGACCCCCTGGTCGAAGCTCTCTGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566727.5
CDS GCA 72 bp GTCCTTCACAGGCTCAAGAGGCTCAAAGGTGGTGGCTaGACTCAGACTCTCCAATCGCTGGGAGATGTGGGA +
Preference number: 6 (lower is better)
Translates to: VLHRLKRLKGGG*TQTLQSLGDVG
Trigger: TCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGAGCCTCTTGAGCCTGTGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS GCA 72 bp GCAGCGCAGCCGCTCCATGCGGAAAAGAAAGGCAACTaGTGCTTCAAACTGCGCTGTCAGGAACAGGACTTG +
Preference number: 6 (lower is better)
Translates to: AAQPLHAEKKGN*CFKLRCQEQDL
Trigger: CAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS CCA 72 bp GTGGCTGCACTCAGACTCTCCAATCGCTGGGAGATGTaGGATATGTCAAGTCCCCGAGACCCGAGGAGAACT +
Preference number: 6 (lower is better)
Translates to: VAALRLSNRWEM*DMSSPRDPRRT
Trigger: AGTTCTCCTCGGGTCTCGGGGACTTGACATATCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 72 bp TCAAAGGTGGTGGCTGCACTCAGACTCTCCAATCGCTaGGAGATGTGGGATATGTCAAGTCCCCGAGACCCG +
Preference number: 6 (lower is better)
Translates to: SKVVAALRLSNR*EMWDMSSPRDP
Trigger: CGGGTCTCGGGGACTTGACATATCCCACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 72 bp TTCAGCCTCTCCTTGTTGGATTGCGGGGCACTGATCTaGGGGACGACAGGGCTCAGCAGTTTGTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: FSLSLLDCGALI*GTTGLSSLFIS
Trigger: GCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563405.1
ENST00000563486.1
ENST00000564887.5
ENST00000569842.5
CDS CCA 72 bp TCAGTATCCATTGGAGATGCAGATCCTGACTGGTTTTaGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCCG +
Preference number: 6 (lower is better)
Translates to: SVSIGDADPDWF*WRRGFAVLAGP
Trigger: CGGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAACCAGTCAGGATCTGCATCTCCAATGGATACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562496.5
CDS TCA 72 bp TCTTATAACTCTGCTCAAGGTACGCCAAGGCCTGCCTaGCAAACTCCATGCGCACTTCCACGCTGCTGCGGT +
Preference number: 6 (lower is better)
Translates to: SYNSAQGTPRPA*QTPCALPRCCG
Trigger: ACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCAGAGTTATAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
CDS TCA 72 bp CTCGCCATAGTCTTCCAACAACTGCTTCTGGAACTGTaGGAGAGTGAGCCTGTCTTGTGGGGAGCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: LAIVFQQLLLEL*ESEPVLWGAGA
Trigger: GGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS GCA 72 bp CTACCTGTGAAGCGGCAAGCAGGTCTCCACAGCGCATaGAGTAGTAAATTAGCGCCCACACAGGATGGCCTT +
Preference number: 6 (lower is better)
Translates to: LPVKRQAGLHSA*SSKLAPTQDGL
Trigger: AAGGCCATCCTGTGTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS GCA 72 bp GCGCAGCCGCTCCATGCGGAAAAGAAAGGCAACTGCTaGTTCAAACTGCGCTGTCAGGAACAGGACTTGGAA +
Preference number: 6 (lower is better)
Translates to: AQPLHAEKKGNC*FKLRCQEQDLE
Trigger: TTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS CCA 72 bp CAGTGTCCTTCACAGGCTCAAGAGGCTCAAAGGTGGTaGCTGCACTCAGACTCTCCAATCGCTGGGAGATGT +
Preference number: 6 (lower is better)
Translates to: QCPSQAQEAQRW*LHSDSPIAGRC
Trigger: ACATCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTTGAGCCTCTTGAGCCTGTGAAGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000562496.5
ENST00000566315.5
ENST00000566678.1
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 72 bp TTCACTTGCTCCCACTCAACCAACATTGACTCCCGATaGTACTCCTCAGCCATGCCGAAGGTCCTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: FTCSHSTNIDSR*YSSAMPKVLFR
Trigger: CCGGAAGAGGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000566315.5
ENST00000566678.1
ENST00000567641.5
ENST00000568283.5
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 72 bp TTCAGCTCAAACAGCACCAGTGCTACATGGACAGCATaGCAGCGCAGCCGCTCCATGCGGAAAAGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: FSSNSTSATWTA*QRSRSMRKRKA
Trigger: TGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS CAA 90 bp ACTCCATGCGCACTTCCACGCTGCTGCGGTTCTTCAGGGCATCCGTaGCCGGTGTCAACAACACGTCTGTCATTTGTTTTACCATGGTCC +
Preference number: 6 (lower is better)
Translates to: TPCALPRCCGSSGHP*PVSTTRLSFVLPWS
Trigger: GGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
CDS CAA 90 bp CCGAAGGTCCTCTTCCGGGACTCTTCGATGGCAGACAGCAGGGCATaGTCCTTCTCATTCTTCAGGAAGCCCTGCAATCCCAAAGAAGGA +
Preference number: 6 (lower is better)
Translates to: PKVLFRDSSMADSRA*SFSFFRKPCNPKEG
Trigger: TCCTTCTTTGGGATTGCAGGGCTTCCTGAAGAATGAGAAGGACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGAAGAGGACCTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568283.5
CDS CAA 90 bp CCGAAGGTCCTCTTCCGGGACTCTTCGATGGCAGACAGCAGGGCATaGTCCTTCTCATTCTTCAGGAAGCCCAAGGCGTGGATAATTGAG +
Preference number: 6 (lower is better)
Translates to: PKVLFRDSSMADSRA*SFSFFRKPKAWIIE
Trigger: CTCAATTATCCACGCCTTGGGCTTCCTGAAGAATGAGAAGGACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGAAGAGGACCTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567081.5
CDS CAA 90 bp CCGAAGGTCCTCTTCCGGGACTCTTCGATGGCAGACAGCAGGGCATaGTCCTTCTCATTCTTCAGGAAGCCCTTGTCTTTCAGAGGCACT +
Preference number: 6 (lower is better)
Translates to: PKVLFRDSSMADSRA*SFSFFRKPLSFRGT
Trigger: AGTGCCTCTGAAAGACAAGGGCTTCCTGAAGAATGAGAAGGACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGAAGAGGACCTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567641.5
CDS TCA 72 bp AGTACACGGCCCGCTTGTAGGGATCTGTATTGTTCCTaGGGGCCCTACGGTAATGCAGCCGGAGCTTGTTTT +
Preference number: 6 (lower is better)
Translates to: STRPACRDLYCS*GPYGNAAGACF
Trigger: AAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS GCA 72 bp GGTCCACATGTCGGAAATGCTCTTATCATCGAGCTCTaGGACGGAAGCACAAAGGTCCACCAGGTTAGGCTG +
Preference number: 6 (lower is better)
Translates to: GPHVGNALIIEL*DGSTKVHQVRL
Trigger: CAGCCTAACCTGGTGGACCTTTGTGCTTCCGTCGCAGAGCTCGATGATAAGAGCATTTCCGACATGTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 72 bp TTGCTGAAGGAGCTCACCAAACCCCTCAGTATCCATTaGAGATGCAGATCCTTGTGCTACAGCCGTCTCCGC +
Preference number: 6 (lower is better)
Translates to: LLKELTKPLSIH*RCRSLCYSRLR
Trigger: GCGGAGACGGCTGTAGCACAAGGATCTGCATCTCCAATGGATACTGAGGGGTTTGGTGAGCTCCTTCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000569842.5
CDS CCA 72 bp ATCCCTGAGGAAATAGAAGTACTGGAGGGCCTCCCTTaGGTCCGTGGACTCAAACTTCCGGGTGTACAGCAT +
Preference number: 6 (lower is better)
Translates to: IPEEIEVLEGLP*VRGLKLPGVQH
Trigger: ATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569842.5
CDS CAA 72 bp CTTGCTGAAGGAGCTCACCAAACCCCTCAGTATCCATaGGAGATGCAGATCCTTGTGCTACAGCCGTCTCCG +
Preference number: 6 (lower is better)
Translates to: LAEGAHQTPQYP*EMQILVLQPSP
Trigger: CGGAGACGGCTGTAGCACAAGGATCTGCATCTCCAATGGATACTGAGGGGTTTGGTGAGCTCCTTCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308159.10
ENST00000569842.5
CDS CAA 72 bp TGCACTGCAGCCCCCGGAGCACAGCATCACCATTCGTaGTGCGCTACACAAATTCAGAGAAGTCAGCCATCA +
Preference number: 6 (lower is better)
Translates to: CTAAPGAQHHHS*CATQIQRSQPS
Trigger: TGATGGCTGACTTCTCTGAATTTGTGTAGCGCACAACGAATGGTGATGCTGTGCTCCGGGGGCTGCAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564887.5
ENST00000566727.5
ENST00000569595.5
CDS CAA 90 bp GTGTGTGCAGAATTCGCTGTTTCACTTGCTCCCACTCAACCAACATaGACTCCCGATGGTACTCCTCAGCCATGCCGAAGGTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: VCAEFAVSLAPTQPT*TPDGTPQPCRRSSS
Trigger: GGAAGAGGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATTCTGCACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000566315.5
ENST00000566678.1
ENST00000567641.5
ENST00000568283.5
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS CAA 90 bp AGGCAAGGGAGCTGGCAGTTTAATGTTCAGGAAACTTCGAACCAATaGGTAAGTCCCAGGCACCCCGCCCAGCTGGGCCTGATGCAAATT +
Preference number: 6 (lower is better)
Translates to: RQGSWQFNVQETSNQ*VSPRHPAQLGLMQI
Trigger: AATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS CAA 90 bp GTGTGTGCAGAATTCGCTGTTTCACTTGCTCCCACTCAACCAACATaGACTCCCGATGGTACTCCTCAGCCATGCCGAAGGTCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: VCAEFAVSLAPTQPT*TPDGTPQPCRRSAR
Trigger: TCTGGCAGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATTCTGCACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569595.5
CDS GCA 72 bp CACTTCCACGCTGCTGCGGTTCTTCAGGGCATCCGTTaGCGGTGTCAACAACACGTCTGTCATTTGTTTTAC +
Preference number: 6 (lower is better)
Translates to: HFHAAAVLQGIR*RCQQHVCHLFY
Trigger: GTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
CDS GCA 72 bp TACTCCTGGAACCAGGTTTTAAACTCTCCCAGCTGGTaGTGGGCTCGATTAACTACCTGTGAAGCGGCAAGC +
Preference number: 6 (lower is better)
Translates to: YSWNQVLNSPSW*WARLTTCEAAS
Trigger: GCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS GCA 72 bp ACTGCAGCCCCCGGAGCACAGCATCACCATTCGTTGTaGGCTACACAAATTCAGAGAAGTCAGCCATCAGTT +
Preference number: 6 (lower is better)
Translates to: TAAPGAQHHHSL*ATQIQRSQPSV
Trigger: AACTGATGGCTGACTTCTCTGAATTTGTGTAGCGCACAACGAATGGTGATGCTGTGCTCCGGGGGCTGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564887.5
ENST00000566727.5
ENST00000569595.5
CDS CCA 72 bp GCTCTTATCATCGAGCTCAAACCCCTCAGTATCCATTaGAGATGCAGATCCTTGTGCTACAGCCGTCTCCGC +
Preference number: 6 (lower is better)
Translates to: ALIIELKPLSIH*RCRSLCYSRLR
Trigger: GCGGAGACGGCTGTAGCACAAGGATCTGCATCTCCAATGGATACTGAGGGGTTTGAGCTCGATGATAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563858.5
CDS CCA 72 bp TTCACTTGCTCCCACTCAACCAACATTGACTCCCGATaGTACTCCTCAGCCATGCCGAAGGTCTGCCAGAAA +
Preference number: 6 (lower is better)
Translates to: FTCSHSTNIDSR*YSSAMPKVCQK
Trigger: TTTCTGGCAGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569595.5
CDS CAA 72 bp GAATTCGCTGTTTCACTTGCTCCCACTCAACCAACATaGACTCCCGATGGTACTCCTCAGCCATGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: EFAVSLAPTQPT*TPDGTPQPCRR
Trigger: CCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000566315.5
ENST00000566678.1
ENST00000567641.5
ENST00000568283.5
ENST00000568656.5
ENST00000569595.5
ENST00000569842.5
ENST00000569863.5
CDS CAA 72 bp GCACTTCCACGCTGCTGCGGTTCTTCAGGGCATCCGTaGCCGGTGTCAACAACACGTCTGTCATTTGTTTTA +
Preference number: 6 (lower is better)
Translates to: ALPRCCGSSGHP*PVSTTRLSFVL
Trigger: TAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
CDS CAA 72 bp CGCTGGGGCCTGGATGACGAGGATGGACTTGTCCCCTaGAGCCTCTTAAACTGTGTGAACAAGATGTTCATG +
Preference number: 6 (lower is better)
Translates to: RWGLDDEDGLVP*SLLNCVNKMFM
Trigger: CATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
ENST00000569842.5
CDS CAA 72 bp TGGTATCATTCCAGCAAAGGTAATCAGAGTGCGGGCTaGACTTCGGAGTTGAGAGTCGCGGTCCTCGATGAC +
Preference number: 6 (lower is better)
Translates to: WYHSSKGNQSAG*TSELRVAVLDD
Trigger: GTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
CDS CAA 72 bp CCTGCACCTGTATCTATTGGCCTGCCGGTTTTCTATTaGCTGAGGCCTTCATGGGCAGGTGAGAAATGCCAG +
Preference number: 6 (lower is better)
Translates to: PAPVSIGLPVFY*LRPSWAGEKCQ
Trigger: CTGGCATTTCTCACCTGCCCATGAAGGCCTCAGCAAATAGAAAACCGGCAGGCCAATAGATACAGGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563437.1
CDS CAA 90 bp TCGATGACTCGCTGGGGCCTGGATGACGAGGATGGACTTGTCCCCTaGAGCCTCTTAAACTGTGTGAACAAGATGTTCATGGTGGCAAGA +
Preference number: 6 (lower is better)
Translates to: SMTRWGLDDEDGLVP*SLLNCVNKMFMVAR
Trigger: TCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563465.1
ENST00000564278.1
ENST00000564887.5
ENST00000569842.5
CDS CAA 90 bp AAGAAAGGCAACTGCTGCTTCAAACTGCGCTGTCAGGAACAGGACTaGGAAGTAGAGGAAGGGTTGCTGGTTCACCGTAAAGTGGGACTC +
Preference number: 6 (lower is better)
Translates to: KKGNCCFKLRCQEQD*EVEEGLLVHRKVGL
Trigger: GAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563437.1
ENST00000564887.5
ENST00000569842.5
CDS CAA 90 bp CCGAAGGTCCTCTTCCGGGACTCTTCGATGGCAGACAGCAGGGCATaGTCCTTCTCATTCTTCAGGAAGCCTGTAGACAAAAGAATTCCA +
Preference number: 6 (lower is better)
Translates to: PKVLFRDSSMADSRA*SFSFFRKPVDKRIP
Trigger: TGGAATTCTTTTGTCTACAGGCTTCCTGAAGAATGAGAAGGACAATGCCCTGCTGTCTGCCATCGAAGAGTCCCGGAAGAGGACCTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS TCA 72 bp AATTCGCTGTTTCACTTGCTCCCACTCAACCAACATTaGCTCCCGATGGTACTCCTCAGCCATGCCGAAGGT +
Preference number: 6 (lower is better)
Translates to: NSLFHLLPLNQH*LPMVLLSHAEG
Trigger: ACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACAGCGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000566315.5
ENST00000566678.1
ENST00000567641.5
ENST00000568283.5
ENST00000568656.5
ENST00000569595.5
ENST00000569842.5
ENST00000569863.5
CDS TCA 72 bp CACCTGTATCTATTGGCCTGCCGGTTTTCTATTTGCTaGGGCCTTCATGGGCAGGTGAGAAATGCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: HLYLLACRFSIC*GLHGQVRNARE
Trigger: TTCCCTGGCATTTCTCACCTGCCCATGAAGGCCTCAGCAAATAGAAAACCGGCAGGCCAATAGATACAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563437.1
CDS TCA 72 bp GGTATCATTCCAGCAAAGGTAATCAGAGTGCGGGCTTaGCTTCGGAGTTGCTGTAGTCCCAGCTACTTGGGA +
Preference number: 6 (lower is better)
Translates to: GIIPAKVIRVRA*LRSCCSPSYLG
Trigger: TCCCAAGTAGCTGGGACTACAGCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569842.5
CDS GCA 72 bp TATTCCTTGAGCCCTATACCGTTCGGCAATGGAGAGTaGCATGTTCTTCAGCCTCTCCTTGTTGGATTGCGG +
Preference number: 6 (lower is better)
Translates to: YSLSPIPFGNGE*HVLQPLLVGLR
Trigger: CCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563405.1
ENST00000563486.1
ENST00000564887.5
ENST00000569842.5
CDS GCA 72 bp CAACCAACATTGACTCCCGATGGTACTCCTCAGCCATaGCGAAGGTCTGCCAGAAAGGAACAGAGAACAATG +
Preference number: 6 (lower is better)
Translates to: QPTLTPDGTPQP*RRSARKEQRTM
Trigger: CATTGTTCTCTGTTCCTTTCTGGCAGACCTTCGGCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569595.5
CDS CCA 72 bp ATGTACTCCTGGAACCAGGTTTTAAACTCTCCCAGCTaGTGCTGGGCTCGATTAACTACCTGTGAAGCGGCA +
Preference number: 6 (lower is better)
Translates to: MYSWNQVLNSPS*CWARLTTCEAA
Trigger: TGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS CCA 72 bp GGGGACAATCTTCTGTCCTTGCTGTTCATGTACTCCTaGAACCAGGTTTTAAACTCTCCCAGCTGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GDNLLSLLFMYS*NQVLNSPSWCW
Trigger: CCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000569842.5
CDS CAA 72 bp TGCTCTTATCATCGAGCTCAAACCCCTCAGTATCCATaGGAGATGCAGATCCTTGTGCTACAGCCGTCTCCG +
Preference number: 6 (lower is better)
Translates to: CSYHRAQTPQYP*EMQILVLQPSP
Trigger: CGGAGACGGCTGTAGCACAAGGATCTGCATCTCCAATGGATACTGAGGGGTTTGAGCTCGATGATAAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563858.5
CDS CAA 72 bp CTTGCTGAAGGAGCTCACCAAACCCCTCAGTATCCATaGGAGATGCAGATCCTGACTGGTTTTGGTGGAGAC +
Preference number: 6 (lower is better)
Translates to: LAEGAHQTPQYP*EMQILTGFGGD
Trigger: GTCTCCACCAAAACCAGTCAGGATCTGCATCTCCAATGGATACTGAGGGGTTTGGTGAGCTCCTTCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562496.5
CDS TCA 72 bp CTCGCTTTCTTGAGTAAAGTCAAGGGCGTCTTCTCCTaGTGCCAGCAGTGTGTGCAGAATTCGCTGTTTCAC +
Preference number: 6 (lower is better)
Translates to: LAFLSKVKGVFS*CQQCVQNSLFH
Trigger: GTGAAACAGCGAATTCTGCACACACTGCTGGCATCAGGAGAAGACGCCCTTGACTTTACTCAAGAAAGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000566678.1
ENST00000567641.5
ENST00000568283.5
ENST00000568656.5
ENST00000569842.5
ENST00000569863.5
CDS CCA 72 bp CCTACGGTAATGCAGCCGGAGCTTGTTTTCCGTAGCTaGGGACAATCTACAGACATAAGGGAACAGACAGAT +
Preference number: 6 (lower is better)
Translates to: PTVMQPELVFRS*GQSTDIREQTD
Trigger: ATCTGTCTGTTCCCTTATGTCTGTAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563437.1
CDS CAA 90 bp TTGCAACTACCTGCACCTGTATCTATTGGCCTGCCGGTTTTCTATTaGCTGAGGCCTTCATGGGCAGGTGAGAAATGCCAGGGAATTAGA +
Preference number: 6 (lower is better)
Translates to: LQLPAPVSIGLPVFY*LRPSWAGEKCQGIR
Trigger: TCTAATTCCCTGGCATTTCTCACCTGCCCATGAAGGCCTCAGCAAATAGAAAACCGGCAGGCCAATAGATACAGGTGCAGGTAGTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563437.1
CDS GCA 72 bp TTCTATTTGCTGAGGCCTTCATGGGCAGGTGAGAAATaGCAGGGAATTAGAACTCCATTGCACAACCCAGCA +
Preference number: 6 (lower is better)
Translates to: FYLLRPSWAGEK*QGIRTPLHNPA
Trigger: TGCTGGGTTGTGCAATGGAGTTCTAATTCCCTGGCATTTCTCACCTGCCCATGAAGGCCTCAGCAAATAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563437.1
CDS CAA 72 bp GGCATCCGTTGCCGGTGTCAACAACACGTCTGTCATTaGTTTTACCATGGTCCACATGTCGGAAATGCTCTT +
Preference number: 6 (lower is better)
Translates to: GIRCRCQQHVCH*FYHGPHVGNAL
Trigger: AAGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
ENST00000569863.5
CDS CAA 72 bp TCCTGTGCCATGGAACCTAATGTAAATGAAATGGCCTaGCAGCTGCCTTCAGAATACAGCTCACCTCGACCA +
Preference number: 6 (lower is better)
Translates to: SCAMEPNVNEMA*QLPSEYSSPRP
Trigger: TGGTCGAGGTGAGCTGTATTCTGAAGGCAGCTGCAAGGCCATTTCATTTACATTAGGTTCCATGGCACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS CAA 90 bp GTTCTTCAGGGCATCCGTTGCCGGTGTCAACAACACGTCTGTCATTaGTTTTACCATGGTCCACATGTCGGAAATGCTCTTATCATCGAG +
Preference number: 6 (lower is better)
Translates to: VLQGIRCRCQQHVCH*FYHGPHVGNALIIE
Trigger: CTCGATGATAAGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
ENST00000569863.5
CDS TCA 72 bp CTTCTCATTCTTCAGGAAGCCCAAGGCGTGGATAATTaGGTCATCTCCCATACAGGGTCAGTGTTAGAGGTT +
Preference number: 6 (lower is better)
Translates to: LLILQEAQGVDN*VISHTGSVLEV
Trigger: AACCTCTAACACTGACCCTGTATGGGAGATGACTCAATTATCCACGCCTTGGGCTTCCTGAAGAATGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567081.5
CDS TCA 72 bp GATCACTGCAGCTCTTCCAAACCTTCTTATATGAGATaGGCTCTGTCGGAACCAGTGCTCAAGTTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: DHCSSSKPSYMR*ALSEPVLKFFP
Trigger: TGGGAAAAACTTGAGCACTGGTTCCGACAGAGCTCATCTCATATAAGAAGGTTTGGAAGAGCTGCAGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564887.5
ENST00000566727.5
ENST00000569595.5
CDS CCA 72 bp CCGGTGTCAACAACACGTCTGTCATTTGTTTTACCATaGTCCACATGTCGGAAATGCTCTTATCATCGAGCT +
Preference number: 6 (lower is better)
Translates to: PVSTTRLSFVLP*STCRKCSYHRA
Trigger: AGCTCGATGATAAGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563858.5
ENST00000564887.5
ENST00000567641.5
ENST00000569842.5
ENST00000569863.5
CDS CAA 72 bp CTTGCTGAAGGAGCTCACCAAACCCCTCAGTATCCATaGGAGATGCAGATCCCAAATATTGTCTCTTTCAAC +
Preference number: 6 (lower is better)
Translates to: LAEGAHQTPQYP*EMQIPNIVSFN
Trigger: GTTGAAAGAGACAATATTTGGGATCTGCATCTCCAATGGATACTGAGGGGTTTGGTGAGCTCCTTCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566315.5
CDS TCA 72 bp GGTATCATTCCAGCAAAGGTAATCAGAGTGCGGGCTTaGCTTCGGAGTTGTTCATCACTGAAATTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: GIIPAKVIRVRA*LRSCSSLKFLK
Trigger: CTTCAGAAATTTCAGTGATGAACAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569322.1
CDS GCA 72 bp CTGGCATCCACCCACTTCAGACAAAGGGAAATAATTTaGAACTGTACCAAGGCGTGGATAATTGAGTCATCT +
Preference number: 6 (lower is better)
Translates to: LASTHFRQREII*NCTKAWIIESS
Trigger: AGATGACTCAATTATCCACGCCTTGGTACAGTTGCAAATTATTTCCCTTTGTCTGAAGTGGGTGGATGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS GCA 72 bp CTGTCATTTGTTTTACCATGGTCCACATGTCGGAAATaGTCTTATCATCGAGCTCAAACCCCTCAGTATCCA +
Preference number: 6 (lower is better)
Translates to: LSFVLPWSTCRK*SYHRAQTPQYP
Trigger: TGGATACTGAGGGGTTTGAGCTCGATGATAAGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563858.5
CDS GCA 72 bp GCAGCTCTTAAATTTAAGGAGTTACAGAACGGTCGATaGTGTCGATCACTGCAGCTCTTCCAAACCTTCTTA +
Preference number: 6 (lower is better)
Translates to: AALKFKELQNGR*CRSLQLFQTFL
Trigger: TAAGAAGGTTTGGAAGAGCTGCAGTGATCGACAGCATCGACCGTTCTGTAACTCCTTAAATTTAAGAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564887.5
ENST00000566727.5
ENST00000569595.5
CDS CCA 72 bp TTGCTGAAGGAGCTCACCAAACCCCTCAGTATCCATTaGAGATGCAGATCCCAAATATTGTCTCTTTCAACT +
Preference number: 6 (lower is better)
Translates to: LLKELTKPLSIH*RCRSQILSLST
Trigger: AGTTGAAAGAGACAATATTTGGGATCTGCATCTCCAATGGATACTGAGGGGTTTGGTGAGCTCCTTCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566315.5
CDS TCA 72 bp GGAAATAATTTGCAACTGTACCAAGGCGTGGATAATTaGGTCATCTCCCATACAGGGTCAGTGTTAGAGGTT +
Preference number: 6 (lower is better)
Translates to: GNNLQLYQGVDN*VISHTGSVLEV
Trigger: AACCTCTAACACTGACCCTGTATGGGAGATGACTCAATTATCCACGCCTTGGTACAGTTGCAAATTATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS CCA 72 bp AGACAAAGGGAAATAATTTGCAACTGTACCAAGGCGTaGATAATTGAGTCATCTCCCATACAGGGTCAGTGT +
Preference number: 6 (lower is better)
Translates to: RQREIICNCTKA*IIESSPIQGQC
Trigger: ACACTGACCCTGTATGGGAGATGACTCAATTATCCACGCCTTGGTACAGTTGCAAATTATTTCCCTTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542526.5
CDS CAA 72 bp CCAAAAGAAGATAGAACGTGGAGTCCACAAATTTATTaGCGCTTATTCCTTGAGCCCTATACCGTTCGGCAA +
Preference number: 6 (lower is better)
Translates to: PKEDRTWSPQIY*RLFLEPYTVRQ
Trigger: TTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563405.1
ENST00000563486.1
ENST00000564887.5
ENST00000569842.5
CDS CAA 72 bp TGGTATCATTCCAGCAAAGGTAATCAGAGTGCGGGCTaGACTTCGGAGTTGTTCATCACTGAAATTTCTGAA +
Preference number: 6 (lower is better)
Translates to: WYHSSKGNQSAG*TSELFITEISE
Trigger: TTCAGAAATTTCAGTGATGAACAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569322.1
CDS TCA 72 bp ATAGATACATACTCAATAAAAATCCTCAAGGGCATCTaGAAGCGTCCCAGGTCCCAAACACATAAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: IDTYSIKILKGI*KRPRSQTHKSR
Trigger: CCTGCTTTTATGTGTTTGGGACCTGGGACGCTTTCAGATGCCCTTGAGGATTTTTATTGAGTATGTATCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563437.1
CDS TCA 72 bp TGCGCTACACAAATTCAGAGAAGTCAGCCATCAGTTTaGAAGCACAAACTGATGGGAGTAACAGTTTATAGG +
Preference number: 6 (lower is better)
Translates to: CATQIQRSQPSV*KHKLMGVTVYR
Trigger: CCTATAAACTGTTACTCCCATCAGTTTGTGCTTTCAAACTGATGGCTGACTTCTCTGAATTTGTGTAGCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS GCA 72 bp CAAAAGAAGATAGAACGTGGAGTCCACAAATTTATTTaGGCTTATTCCTTGAGCCCTATACCGTTCGGCAAT +
Preference number: 6 (lower is better)
Translates to: QKKIERGVHKFI*AYSLSPIPFGN
Trigger: ATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000563405.1
ENST00000563486.1
ENST00000564887.5
ENST00000569842.5
CDS CAA 72 bp ACCACATCTCATTGTCTCATCTCAGAAATCGATTCTTaGCAATGCTGCACTGGGTCAGAGTTTCAAAGGAAT +
Preference number: 6 (lower is better)
Translates to: TTSHCLISEIDS*QCCTGSEFQRN
Trigger: ATTCCTTTGAAACTCTGACCCAGTGCAGCATTGCAAAGAATCGATTTCTGAGATGAGACAATGAGATGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567081.5
CDS GCA 72 bp CATTGTCTCATCTCAGAAATCGATTCTTTGCAATGCTaGACTGGGTCAGAGTTTCAAAGGAATCTTAGTCAT +
Preference number: 6 (lower is better)
Translates to: HCLISEIDSLQC*TGSEFQRNLSH
Trigger: ATGACTAAGATTCCTTTGAAACTCTGACCCAGTGCAGCATTGCAAAGAATCGATTTCTGAGATGAGACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567081.5
CDS GCA 72 bp TCTCATTGTCTCATCTCAGAAATCGATTCTTTGCAATaGTGCACTGGGTCAGAGTTTCAAAGGAATCTTAGT +
Preference number: 6 (lower is better)
Translates to: SHCLISEIDSLQ*CTGSEFQRNLS
Trigger: ACTAAGATTCCTTTGAAACTCTGACCCAGTGCAGCATTGCAAAGAATCGATTTCTGAGATGAGACAATGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567081.5
CDS CAA 90 bp AAAATGCAAACCACATCTCATTGTCTCATCTCAGAAATCGATTCTTaGCAATGCTGCACTGGGTCAGAGTTTCAAAGGAATCTTAGTCAT +
Preference number: 6 (lower is better)
Translates to: KMQTTSHCLISEIDS*QCCTGSEFQRNLSH
Trigger: ATGACTAAGATTCCTTTGAAACTCTGACCCAGTGCAGCATTGCAAAGAATCGATTTCTGAGATGAGACAATGAGATGTGGTTTGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567081.5
CDS CAA 90 bp GCCTCTTCAAACAGTCCTTTATTTTCTGCCACAGAAGCAACTTTGTaGATAATAGGCTTTGTGTCACTAGTAAACTTATCTATGACTCCA +
Preference number: 6 (lower is better)
Translates to: ASSNSPLFSATEATL*IIGFVSLVNLSMTP
Trigger: TGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569842.5
CDS CAA 90 bp GCTGCCTCTTCAAACAGTCCTTTATTTTCTGCCACAGAAGCAACTTaGTTGATAATAGGCTTTGTGTCACTAGTAAACTTATCTATGACT +
Preference number: 6 (lower is better)
Translates to: AASSNSPLFSATEAT*LIIGFVSLVNLSMT
Trigger: AGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569842.5
CDS CAA 90 bp AAACTGATGGGAGTAACAGTTTATAGGTTACAGAAGGGTATTTTATaGTTAACGGACTGTACCAAGTTAAGATTTAAGAGGGGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: KLMGVTVYRLQKGIL*LTDCTKLRFKRGRD
Trigger: GTCTCTCCCCCTCTTAAATCTTAACTTGGTACAGTCCGTTAACAATAAAATACCCTTCTGTAACCTATAAACTGTTACTCCCATCAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564887.5
CDS CAA 72 bp AACAGTCCTTTATTTTCTGCCACAGAAGCAACTTTGTaGATAATAGGCTTTGTGTCACTAGTAAACTTATCT +
Preference number: 6 (lower is better)
Translates to: NSPLFSATEATL*IIGFVSLVNLS
Trigger: AGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308159.10
ENST00000542526.5
ENST00000564887.5
ENST00000569842.5