RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUP85 (Homo sapiens)

Ensembl gene IDs: ENSG00000125450

Ensembl transcript IDs: ENST00000245544.9, ENST00000449421.6, ENST00000540768.5, ENST00000577208.5, ENST00000577561.1, ENST00000577645.5, ENST00000578294.1, ENST00000578830.5, ENST00000578987.1, ENST00000579298.5, ENST00000579324.5, ENST00000579557.5, ENST00000579900.5, ENST00000580879.5, ENST00000581104.5, ENST00000581335.1, ENST00000582681.1, ENST00000582833.5, ENST00000583070.5, ENST00000583548.1, ENST00000583569.5, ENST00000583877.5, ENST00000583948.5, ENST00000584155.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGACCTCAGGATCCCCTGACTCCTGCGTCCCACAGACAGTAGGCTaGGAGCAGGGCCAGCTCACCTTGTTCAGTCATCTGCCGCTGCTC +
Preference number: 1 (lower is better)
Translates to: VTSGSPDSCVPQTVG*EQGQLTLFSHLPLL
Trigger: GAGCAGCGGCAGATGACTGAACAAGGTGAGCTGGCCCTGCTCCCAGCCTACTGTCTGTGGGACGCAGGAGTCAGGGGATCCTGAGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR TCA 90 bp AGGAGGATGGCTGGGGTAGGCATAAAGTGTGACCTCAGGATCCCCTaGCTCCTGCGTCCCACAGACAGTAGGCTGGGAGCAGGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: RRMAGVGIKCDLRIP*LLRPTDSRLGAGPA
Trigger: AGCTGGCCCTGCTCCCAGCCTACTGTCTGTGGGACGCAGGAGTCAGGGGATCCTGAGGTCACACTTTATGCCTACCCCAGCCATCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR GCA 90 bp GCGAATGTGCTGTCCTGGAGGTACCGCTCACATTCCTCGTGCCAGTaGTGCCACTTCAGCTCCAGCTCTGTCAGTGTCTGGGTGTTCCCG +
Preference number: 1 (lower is better)
Translates to: ANVLSWRYRSHSSCQ*CHFSSSSVSVWVFP
Trigger: CGGGAACACCCAGACACTGACAGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCGGTACCTCCAGGACAGCACATTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 90 bp CTGGTGGCGAATGTGCTGTCCTGGAGGTACCGCTCACATTCCTCGTaGCAGTGCTGCCACTTCAGCTCCAGCTCTGTCAGTGTCTGGGTG +
Preference number: 1 (lower is better)
Translates to: LVANVLSWRYRSHSS*QCCHFSSSSVSVWV
Trigger: CACCCAGACACTGACAGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCGGTACCTCCAGGACAGCACATTCGCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 90 bp AATGGGCATTGTCCTCATCAGGTCCCCCATGATTCGGCATATGCCTaGAGAGGCGGGGCTGGCATCGGCTTCCTTGGAGAGCATCTGTCG +
Preference number: 1 (lower is better)
Translates to: NGHCPHQVPHDSAYA*RGGAGIGFLGEHLS
Trigger: CGACAGATGCTCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATCATGGGGGACCTGATGAGGACAATGCCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 90 bp AATGTGCTGTCCTGGAGGTACCGCTCACATTCCTCGTGCCAGTGCTaGCACTTCAGCTCCAGCTCTGTCAGTGTCTGGGTGTTCCCGGGA +
Preference number: 1 (lower is better)
Translates to: NVLSWRYRSHSSCQC*HFSSSSVSVWVFPG
Trigger: TCCCGGGAACACCCAGACACTGACAGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCGGTACCTCCAGGACAGCACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 90 bp GTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTaGTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAG +
Preference number: 1 (lower is better)
Translates to: VICRCSQIRSTFRAF*SVFRGIRSMCSSRE
Trigger: CTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR GCA 90 bp AGGGCACCAGGAAACTGCCGACATCTTGCCCAACTCCCAGTGAAGTaGACCCCAGCTGTTTCCTCTTGCCAGACAGCAAGGAACTGGCCC +
Preference number: 1 (lower is better)
Translates to: RAPGNCRHLAQLPVK*TPAVSSCQTARNWP
Trigger: GGGCCAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR CCA 90 bp GATGTCAAACTCAAAGGCTGCCAACAAGATGTTGTCCAGGGGTTCTaGGCTGCTCTCACCTCCCAGAAACAGGTCCAGGCTGGACTGGGC +
Preference number: 1 (lower is better)
Translates to: DVKLKGCQQDVVQGF*AALTSQKQVQAGLG
Trigger: GCCCAGTCCAGCCTGGACCTGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR TCA 90 bp CTTGAAGGGCACCAGGAAACTGCCGACATCTTGCCCAACTCCCAGTaGAGTGCACCCCAGCTGTTTCCTCTTGCCAGACAGCAAGGAACT +
Preference number: 1 (lower is better)
Translates to: LEGHQETADILPNSQ*SAPQLFPLARQQGT
Trigger: AGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR GCA 90 bp CAAACTCAAAGGCTGCCAACAAGATGTTGTCCAGGGGTTCTGGGCTaGTCTCACCTCCCAGAAACAGGTCCAGGCTGGACTGGGCATAGT +
Preference number: 1 (lower is better)
Translates to: QTQRLPTRCCPGVLG*SHLPETGPGWTGHS
Trigger: ACTATGCCCAGTCCAGCCTGGACCTGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CCA 90 bp TCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCATaGCTAAGATCTTACAAATGCTGCGAACTCTTGGCGTCCACAGCC +
Preference number: 1 (lower is better)
Translates to: SKRGQNPGDCCGRLS*LRSYKCCELLASTA
Trigger: GGCTGTGGACGCCAAGAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR TCA 90 bp CGTCAAGTCCTCCAGACACCGCATCAACTCATAAGTCTGTTCTGCTaGGAAAATCACCTAGGGAAGAGAGCCTGCCTTGCTTGGCTGCCC +
Preference number: 1 (lower is better)
Translates to: RQVLQTPHQLISLFC*ENHLGKRACLAWLP
Trigger: GGGCAGCCAAGCAAGGCAGGCTCTCTTCCCTAGGTGATTTTCTCAGCAGAACAGACTTATGAGTTGATGCGGTGTCTGGAGGACTTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR TCA 90 bp CAGTTGCTCAGGGCGATGCTTTTAGCTCGATACTTTTGGAGGACTTaGAGGGCACCAGGAAACTGCCGACATCTTGCCCAACTCCCAGTG +
Preference number: 1 (lower is better)
Translates to: QLLRAMLLARYFWRT*RAPGNCRHLAQLPV
Trigger: CACTGGGAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTATCGAGCTAAAAGCATCGCCCTGAGCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR GCA 90 bp ATACTTTTGGAGGACTTGAAGGGCACCAGGAAACTGCCGACATCTTaGCCAACTCCCAGTGAAGTGCACCCCAGCTGTTTCCTCTTGCCA +
Preference number: 1 (lower is better)
Translates to: ILLEDLKGTRKLPTS*PTPSEVHPSCFLLP
Trigger: TGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR CCA 90 bp GCGATACTTTCCCAGGAATGTCAGTCGGTCACTGAGCATCATGGCTaGCCCCAGGTTGTCAATGAGATCCAAATCAGAAAAGCAGCCTCG +
Preference number: 1 (lower is better)
Translates to: AILSQECQSVTEHHG*PQVVNEIQIRKAAS
Trigger: CGAGGCTGCTTTTCTGATTTGGATCTCATTGACAACCTGGGGCCAGCCATGATGCTCAGTGACCGACTGACATTCCTGGGAAAGTATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 90 bp GTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCAAC +
Preference number: 1 (lower is better)
Translates to: VSMSSSWSCSVSDSP*TGLLDVKSSRHRIN
Trigger: GTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGATGACATAGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CCA 90 bp TCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCATaGCTAAGATCTTACAAATGCTGCGAACTTGTTCAGTCATCTGCC +
Preference number: 1 (lower is better)
Translates to: SKRGQNPGDCCGRLS*LRSYKCCELVQSSA
Trigger: GGCAGATGACTGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
3UTR TCA 90 bp ATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACACCGCATCAACTCATAAGTCTGTTC +
Preference number: 1 (lower is better)
Translates to: ILELLGIRFSMHRSS*RQVLQTPHQLISLF
Trigger: GAACAGACTTATGAGTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 90 bp GATGCTGCACTCTTTGATTACTTGATGGATGTCAAACTCAAAGGCTaGCAACAAGATGTTGTCCAGGGGTTCTGGGCTGCTCTCACCTCC +
Preference number: 1 (lower is better)
Translates to: DAALFDYLMDVKLKG*QQDVVQGFWAALTS
Trigger: GGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CCA 90 bp CCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTaGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCAGATT +
Preference number: 1 (lower is better)
Translates to: PEQDFVPEKVSAFPP*WSLCHHPGAARYQI
Trigger: AATCTGATACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR TCA 90 bp CCATACAAAGATACCACATTGAAGCAGTTCTCAGGAACCTTCCAGTaGGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGA +
Preference number: 1 (lower is better)
Translates to: PYKDTTLKQFSGTFQ*AFSYNCPSKISCQR
Trigger: TCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
3UTR GCA 90 bp GGCCCATGTTCGGACGTTCTTCCTTTCATACCCTTCGCAATAGTGTaGTTTGTATACGAATACCTCATTTCAAATCAAGCAGTGTTTGTT +
Preference number: 1 (lower is better)
Translates to: GPCSDVLPFIPFAIV*FVYEYLISNQAVFV
Trigger: AACAAACACTGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCGAAGGGTATGAAAGGAAGAACGTCCGAACATGGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR TCA 90 bp GTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGGACCTCAGGATCCCCTaGCTCCTGCGTCCCACAGAC +
Preference number: 2 (lower is better)
Translates to: VICRCSQIRSTFRAFCSVDLRIP*LLRPTD
Trigger: GTCTGTGGGACGCAGGAGTCAGGGGATCCTGAGGTC...CACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR-3UTR GCA 90 bp TGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGCCCGATTCGGCATATGCCTaGAGAGGCGGGGCTGGCATC +
Preference number: 2 (lower is better)
Translates to: CSVFRGIRSMCSSRETRPDSAYA*RGGAGI
Trigger: GATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATC...GGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CCA 90 bp CACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCTGCAGAGGCGGGGCTaGCATCGGCTTCCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: HRSAAPSGLSARCSEVSALQRRG*HRLPWR
Trigger: TCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAG...AGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CCA 90 bp CCACAGGCTGGGATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTGGAGGAGCTTGCAGTaGTCCAGCAGGTCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: PQAGMSKQSRGVLQQEELWRSLQ*SSRSVR
Trigger: CCTGACAGACCTGCTGGACCACTGCAAGCTCCTCCA...GAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR-3UTR CCA 90 bp AAAGGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTCCACAGACAGTAGGCTaGGAGCAGGGCCAGCTCACC +
Preference number: 2 (lower is better)
Translates to: KGGILSTDAPREGRTQAIPQTVG*EQGQLT
Trigger: GGTGAGCTGGCCCTGCTCCCAGCCTACTGTCTGTGG...AATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR-3UTR GCA 90 bp GGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCTGGCAACTCCCAGTGAAGTaGACCCCAGCTGTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: GPARGSNQSNRPPAATGWQLPVK*TPAVSS
Trigger: AGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTG...CCAGCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR-3UTR GCA 90 bp TCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGCCCAGCAGGGCACCAGGAAACTaGCGACATCTTGCCCAACTC +
Preference number: 2 (lower is better)
Translates to: SVFRGIRSMCSSRETRPSRAPGN*RHLAQL
Trigger: GAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCT...GCTGGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR-3UTR GCA 90 bp GCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGATGCTGCACTCCTTGTTCAGTCATCTaGCGCTGCTCACAGATCCGC +
Preference number: 2 (lower is better)
Translates to: AGLSGGPQTTSCSGRCCTPCSVI*RCSQIR
Trigger: GCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGG...AGTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR-3UTR CCA 90 bp TCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGCCCAGCGCGAATGTGCTGTCCTaGAGGTACCGCTCACATTCC +
Preference number: 2 (lower is better)
Translates to: SVFRGIRSMCSSRETRPSANVLS*RYRSHS
Trigger: GGAATGTGAGCGGTACCTCCAGGACAGCACATTCGC...GCTGGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CCA 90 bp TCATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCGGCTGCCCCCAGCCCTaGCCTGCATTGGTTGGGGCA +
Preference number: 2 (lower is better)
Translates to: SSWSCSVSDSPCTGLLDVGCPQP*PALVGA
Trigger: TGCCCCAACCAATGCAGGCCAGGGCTGGGGGCAGCC...GACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR TCA 90 bp TCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCTGCCACAGGCTGGGATaGGCAAACAGTCCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: SDSPCTGLLDVKSSRHRICHRLG*ANSPEA
Trigger: CGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGGCA...GATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR TCA 90 bp ACCACTGCTGCTGCAACCTTCACCTGTTTCTGTTCCAAAAGGGGCAAGGCGTCTAAGAGAGACTCCAGGTaGGGGCTGGTGGCGAATGTG +
Preference number: 2 (lower is better)
Translates to: TTAAATFTCFCSKRGKASKRDSR*GLVANV
Trigger: CACATTCGCCACCAGCCCTCACCTGGAGTCTCTCTT...AGACGCCTTGCCCCTTTTGGAACAGAAACAGGTGAAGGTTGCAGCAGCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR TCA 90 bp GGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGAAATAGAGGTTGTGTaGCTGGAGGAGCTTGCAGTG +
Preference number: 2 (lower is better)
Translates to: GGILSTDAPREGRTQAIVEIEVV*LEELAV
Trigger: CACTGCAAGCTCCTCCAGTCACACAACCTCTATTTC...AACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR-3UTR TCA 90 bp GCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCATTGCCCAACTCCCAGTaGAGTGCACCCCAGCTGTTT +
Preference number: 2 (lower is better)
Translates to: AAPSGLSARCSEVSAQCALPNSQ*SAPQLF
Trigger: AAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAA...TGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR-3UTR GCA 90 bp CCACAGGCTGGGATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCATCATCCTGGAGCTaGTCGGTATCAGATTCTCCA +
Preference number: 2 (lower is better)
Translates to: PQAGMSKQSRGVLQQEELSSSWS*SVSDSP
Trigger: TGGAGAATCTGATACCGAGCAGCTCCAGGATGATGA...GAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR TCA 90 bp GTGGCAAAGGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGTCAGGAACCTTCCAGTaGGCCTTCTCTTATAATTGC +
Preference number: 2 (lower is better)
Translates to: VAKAASLARMLQERAEPRSGTFQ*AFSYNC
Trigger: GCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGA...CCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTTTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CAA 90 bp GCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATaGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGA +
Preference number: 2 (lower is better)
Translates to: ASLARMLQERAEPRR*LRTAFMAKILQMLR
Trigger: TCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR CAA 90 bp CCAGTTGCTCAGGGCGATGCTTTTAGCTCGATACTTTTGGAGGACTaGAAGGGCACCAGGAAACTGCCGACATCTTGCCCAACTCCCAGT +
Preference number: 2 (lower is better)
Translates to: PVAQGDAFSSILLED*KGTRKLPTSCPTPS
Trigger: ACTGGGAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTATCGAGCTAAAAGCATCGCCCTGAGCAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR-3UTR GCA 90 bp AGGAGCTTGCAGTGGTCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTC +
Preference number: 2 (lower is better)
Translates to: RSLQWSSRSVRWATNHQLVSDSP*TGLLDV
Trigger: GACGTCAAGAAGACCTGTGCATGGAGAATCTGATAC...CAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGACCACTGCAAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR GCA 90 bp CAAATGCTGCGAACTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCAGCACCAAACTGCCGACATCTTaGCCAACTCCCAGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: QMLRTCSVICRCSQIRSTKLPTS*PTPSEV
Trigger: CACTTCACTGGGAGTTGGGCAAGATGTCGGCAGTTT...GGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGTTCGCAGCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR-3UTR CCA 90 bp GCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGTCTATGTCATCATCCTaGAGCTGCTCGGTATCAGAT +
Preference number: 2 (lower is better)
Translates to: AASLARMLQERAEPRRLLSMSSS*SCSVSD
Trigger: ATCTGATACCGAGCAGCTCCAGGATGATGACATAGA...CAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CCA 90 bp GCTGGCCCCAGGTTGTCAATGAGATCCAAATCAGAAAAGCAGCCTCGCTCACAGAGCTCTGTCAGTGTCTaGGTGTTCCCGGGACTAAGA +
Preference number: 2 (lower is better)
Translates to: AGPRLSMRSKSEKQPRSQSSVSV*VFPGLR
Trigger: TCTTAGTCCCGGGAACACCCAGACACTGACAGAGCT...CTGTGAGCGAGGCTGCTTTTCTGATTTGGATCTCATTGACAACCTGGGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CAA 90 bp TCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTaGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGAACT +
Preference number: 2 (lower is better)
Translates to: SLARMLQERAEPRRL*RTAFMAKILQMLRT
Trigger: AGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR-3UTR TCA 90 bp ACCACTGCTGCTGCAACCTTCACCTGTTTCTGTTCCAAAAGGGGCAAGGCGTCTATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: TTAAATFTCFCSKRGKASMHRSS*RQVLQT
Trigger: TGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCAT...AGACGCCTTGCCCCTTTTGGAACAGAAACAGGTGAAGGTTGCAGCAGCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR TCA 90 bp ATCTTACAAATGCTGCGAACTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCTCATCAGGTCCCCCATaGTTCGGCATATGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: ILQMLRTCSVICRCSQIRSSGPP*FGICLQ
Trigger: CTGCAGGCATATGCCGAATCATGGGGGACCTGATGA...GCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGTTCGCAGCATTTGTAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CCA 90 bp AGACTCGGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACATCAGCATTTCCACCTTaGTGGTCTCTATGTCATCAT +
Preference number: 2 (lower is better)
Translates to: RLGPARGSNQSNRPPAATSAFPP*WSLCHH
Trigger: ATGATGACATAGAGACCACCAAGGTGGAAATGCTGA...TGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCCGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CCA 90 bp GAGGGGCAATCCGAGACGTCATCAAGGACAGAAGGAGAGAAGCTGCGTCGGCAAGTTTTACTGTGGGATTaGAGTACAAGAGCCGAGTCA +
Preference number: 2 (lower is better)
Translates to: EGQSETSSRTEGEKLRRQVLLWD*STRAES
Trigger: TGACTCGGCTCTTGTACTCCAATCCCACAGTAAAAC...TTGCCGACGCAGCTTCTCTCCTTCTGTCCTTGATGACGTCTCGGATTGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CCA 90 bp ATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCGGAACTCTCTCATGTTaGAACCGAAATAGAGGTTGT +
Preference number: 2 (lower is better)
Translates to: ICRCSQIRSTFRAFCSVFGTLSC*NRNRGC
Trigger: ACAACCTCTATTTCGGTTCCAACATGAGAGAGTTCC...GAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR CAA 90 bp GCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTaGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCAGAT +
Preference number: 2 (lower is better)
Translates to: ARARFRARESLSIST*VVSMSSSWSCSVSD
Trigger: ATCTGATACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR TCA 90 bp CAGCATTTCCACCTTGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: QHFHLGGLYVIILELLGIMHRSS*RQVLQT
Trigger: TGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCAT...GATACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR CCA 90 bp TCTATGTCATCATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTAGCAGGTCTGTCAGGTaGGCCACAAACCACCAGTTG +
Preference number: 2 (lower is better)
Translates to: SMSSSWSCSVSDSPCTGLSRSVR*ATNHQL
Trigger: CAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCT...AAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGATGACATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CAA 90 bp CATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGACACCGCATCAACTCATAAGTCTGTT +
Preference number: 2 (lower is better)
Translates to: HPGAARYQILHAQVF*TSSPPDTASTHKSV
Trigger: AACAGACTTATGAGTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR GCA 90 bp TTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGAACTTGTTCATCCTCGTGCCAGTGCTaGCACTTCAGCTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: LLRTAFMAKILQMLRTCSSSCQC*HFSSSS
Trigger: AGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGA...TGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR GCA 90 bp TTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGAACTTGTTCACCAGGGGTTCTGGGCTaGTCTCACCTCCCAGAAACA +
Preference number: 2 (lower is better)
Translates to: LLRTAFMAKILQMLRTCSPGVLG*SHLPET
Trigger: TGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGG...TGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR GCA 90 bp GGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTCTAAGATCTTACAAATaGTGCGAACTTGTTCAGTCA +
Preference number: 2 (lower is better)
Translates to: GGILSTDAPREGRTQAIVLRSYK*CELVQS
Trigger: TGACTGAACAAGTTCGCAGCATTTGTAAGATCTTAG...AACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
3UTR-3UTR TCA 90 bp TCATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCTCAGGAACCTTCCAGTaGGCCTTCTCTTATAATTGC +
Preference number: 2 (lower is better)
Translates to: SSWSCSVSDSPCTGLLDVSGTFQ*AFSYNC
Trigger: GCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGA...GACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR CCA 90 bp GGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACTCTATGTCATCATCCTaGAGCTGCTCGGTATCAGAT +
Preference number: 2 (lower is better)
Translates to: GGLYVIILELLGIRFSMHSMSSS*SCSVSD
Trigger: ATCTGATACCGAGCAGCTCCAGGATGATGACATAGA...GTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGATGACATAGAGACCACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR GCA 90 bp AGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCTCATCATCCTGGAGCTaGTCGGTATCAGATTCTCCA +
Preference number: 2 (lower is better)
Translates to: SEPSLIIARARFRARESLSSSWS*SVSDSP
Trigger: TGGAGAATCTGATACCGAGCAGCTCCAGGATGATGA...GAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR GCA 90 bp GTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCAACTCATAAGTCTGTTCTGGTCAAACTCAAAGGCTaGCAACAAGATGTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: VFLTSSPPDTASTHKSVLVKLKG*QQDVVQ
Trigger: CTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGAC...CAGAACAGACTTATGAGTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR GCA 90 bp TATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTTCATCATCCTGGAGCTaGTCGGTATCAGATTCTCCA +
Preference number: 2 (lower is better)
Translates to: YNCPSKISCQRKSQHFHLSSSWS*SVSDSP
Trigger: TGGAGAATCTGATACCGAGCAGCTCCAGGATGATGA...AAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTGCATTTCCACCTTGGTaGTCTCTATGTCATCATCCT +
Preference number: 2 (lower is better)
Translates to: SSEPSLIIARARFRARESAFPPW*SLCHHP
Trigger: AGGATGATGACATAGAGACCACCAAGGTGGAAATGC...ACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR GCA 90 bp TCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTC +
Preference number: 2 (lower is better)
Translates to: SYNCPSKISCQRKSQHFHVSDSP*TGLLDV
Trigger: GACGTCAAGAAGACCTGTGCATGGAGAATCTGATAC...GTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR GCA 90 bp CGCAATAGTGTGCTTTGTATACGAATACCTCATTTCAAATCAAGCAGTGTTTGTACCTTCAGGGCTTTCTaGTCGGTGTTCAGAGGTATC +
Preference number: 2 (lower is better)
Translates to: RNSVLCIRIPHFKSSSVCTFRAF*SVFRGI
Trigger: GATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGT...ACAAACACTGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CCA 90 bp AATCTATATACATTGCCATACAAAGATACCACATTGAAGCAGTTCTCAGGAACCGCATTTCCACCTTGGTaGTCTCTATGTCATCATCAT +
Preference number: 2 (lower is better)
Translates to: NLYTLPYKDTTLKQFSGTAFPPW*SLCHHH
Trigger: ATGATGATGACATAGAGACCACCAAGGTGGAAATGC...GGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTATGGCAATGTATATAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
3UTR-3UTR CAA 90 bp GCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCTGGGCTGGCATCGGCTTCCTaGGAGAGCATCTGTCGGGCC +
Preference number: 3 (lower is better)
Translates to: AQLGAVIKVIDPQLPQAGLASAS*ESICRA
Trigger: GGCCCGACAGATGCTCTCCAAGGAAGCCGATGCCAG...CCCAGCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 72 bp GCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTaGAGCTCCAGGGAGACTCGGCCCAGCTCGGGGCAG +
Preference number: 3 (lower is better)
Translates to: AFCSVFRGIRSM*SSRETRPSSGQ
Trigger: CTGCCCCGAGCTGGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR GCA 72 bp GCTGGGAGCAGGGCCAGCTCACCTTGTTCAGTCATCTaGCGCTGCTCACAGATCCGCAGCACCTTCAGGGCT +
Preference number: 3 (lower is better)
Translates to: AGSRASSPCSVI*RCSQIRSTFRA
Trigger: AGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGGTGAGCTGGCCCTGCTCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR-3UTR CAA 90 bp TCCCTGAGGAACCTGTCTGACACGAGCGTGGCAAAGGCGGCATCCTTAGCACGGGCCACAAACCACCAGTaGCTCAGGGCGATGCTGCAC +
Preference number: 3 (lower is better)
Translates to: SLRNLSDTSVAKAASLARATNHQ*LRAMLH
Trigger: GTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGC...CCGTGCTAAGGATGCCGCCTTTGCCACGCTCGTGTCAGACAGGTTCCTCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 72 bp TGTCCTCATCAGGTCCCCCATGATTCGGCATATGCCTaGAGAGGCGGGGCTGGCATCGGCTTCCTTGGAGAG +
Preference number: 3 (lower is better)
Translates to: CPHQVPHDSAYA*RGGAGIGFLGE
Trigger: CTCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATCATGGGGGACCTGATGAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CCA 72 bp GGATCCCCTGACTCCTGCGTCCCACAGACAGTAGGCTaGGAGCAGGGCCAGCTCACCTTGTTCAGTCATCTG +
Preference number: 3 (lower is better)
Translates to: GSPDSCVPQTVG*EQGQLTLFSHL
Trigger: CAGATGACTGAACAAGGTGAGCTGGCCCTGCTCCCAGCCTACTGTCTGTGGGACGCAGGAGTCAGGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR-3UTR CAA 90 bp GGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCTGGCCCAGCTGTTTCCTCTaGCCAGACAGCAAGGAACTG +
Preference number: 3 (lower is better)
Translates to: GPARGSNQSNRPPAATGWPSCFL*PDSKEL
Trigger: CAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGG...CCAGCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR TCA 72 bp CGTGAGGAGGAGGATGGCTGGGGTAGGCATAAAGTGTaGCCTCAGGATCCCCTGACTCCTGCGTCCCACAGA +
Preference number: 3 (lower is better)
Translates to: REEEDGWGRHKV*PQDPLTPASHR
Trigger: TCTGTGGGACGCAGGAGTCAGGGGATCCTGAGGTCACACTTTATGCCTACCCCAGCCATCCTCCTCCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR GCA 72 bp TCCTGGAGGTACCGCTCACATTCCTCGTGCCAGTGCTaGCACTTCAGCTCCAGCTCTGTCAGTGTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: SWRYRSHSSCQC*HFSSSSVSVWV
Trigger: CACCCAGACACTGACAGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCGGTACCTCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 72 bp AGCAGGGCCAGCTCACCTTGTTCAGTCATCTGCCGCTaGTCACAGATCCGCAGCACCTTCAGGGCTTTCTGC +
Preference number: 3 (lower is better)
Translates to: SRASSPCSVICR*SQIRSTFRAFC
Trigger: GCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGGTGAGCTGGCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR-3UTR CAA 90 bp TGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGCCCCATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGAC +
Preference number: 3 (lower is better)
Translates to: CSVFRGIRSMCSSRETRPHAQVF*TSSPPD
Trigger: GTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATG...GGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 72 bp AGGCTGCCAACAAGATGTTGTCCAGGGGTTCTGGGCTaGTCTCACCTCCCAGAAACAGGTCCAGGCTGGACT +
Preference number: 3 (lower is better)
Translates to: RLPTRCCPGVLG*SHLPETGPGWT
Trigger: AGTCCAGCCTGGACCTGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 72 bp CGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTaGTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGC +
Preference number: 3 (lower is better)
Translates to: RCSQIRSTFRAF*SVFRGIRSMCS
Trigger: GCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR-3UTR CAA 90 bp GGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGCCACAAACCACCAGTaGCTCAGGGCGATGCTTTTA +
Preference number: 3 (lower is better)
Translates to: GILSTDAPREGRTQAIVAATNHQ*LRAMLL
Trigger: TAAAAGCATCGCCCTGAGCAACTGGTGGTTTGTGGC...CGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR TCA 72 bp CACCAGGAAACTGCCGACATCTTGCCCAACTCCCAGTaGAGTGCACCCCAGCTGTTTCCTCTTGCCAGACAG +
Preference number: 3 (lower is better)
Translates to: HQETADILPNSQ*SAPQLFPLARQ
Trigger: CTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATGTCGGCAGTTTCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR GCA 72 bp AATGTGCTGTCCTGGAGGTACCGCTCACATTCCTCGTaGCAGTGCTGCCACTTCAGCTCCAGCTCTGTCAGT +
Preference number: 3 (lower is better)
Translates to: NVLSWRYRSHSS*QCCHFSSSSVS
Trigger: ACTGACAGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCGGTACCTCCAGGACAGCACATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 72 bp GAGGACTTGAAGGGCACCAGGAAACTGCCGACATCTTaGCCAACTCCCAGTGAAGTGCACCCCAGCTGTTTC +
Preference number: 3 (lower is better)
Translates to: EDLKGTRKLPTS*PTPSEVHPSCF
Trigger: GAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCTTCAAGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR CCA 72 bp CAGTGCTGCCACTTCAGCTCCAGCTCTGTCAGTGTCTaGGTGTTCCCGGGACTAAGAATGGGCATTGTCCTC +
Preference number: 3 (lower is better)
Translates to: QCCHFSSSSVSV*VFPGLRMGIVL
Trigger: GAGGACAATGCCCATTCTTAGTCCCGGGAACACCCAGACACTGACAGAGCTGGAGCTGAAGTGGCAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CCA 72 bp CTCAAAGGCTGCCAACAAGATGTTGTCCAGGGGTTCTaGGCTGCTCTCACCTCCCAGAAACAGGTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: LKGCQQDVVQGF*AALTSQKQVQA
Trigger: AGCCTGGACCTGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CCA 72 bp GCTGCGTCGGCAAAACGCTTCTCCCCGTACATACGGTaGAACTCGCGATACTTTCCCAGGAATGTCAGTCGG +
Preference number: 3 (lower is better)
Translates to: AASAKRFSPYIR*NSRYFPRNVSR
Trigger: CCGACTGACATTCCTGGGAAAGTATCGCGAGTTCCACCGTATGTACGGGGAGAAGCGTTTTGCCGACGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 72 bp TGGAACCGAAATAGAGGTTGTGTGACTGGAGGAGCTTaGAGTGGTCCAGCAGGTCTGTCAGGTGGGCCACAA +
Preference number: 3 (lower is better)
Translates to: WNRNRGCVTGGA*SGPAGLSGGPQ
Trigger: TTGTGGCCCACCTGACAGACCTGCTGGACCACTGCAAGCTCCTCCAGTCACACAACCTCTATTTCGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR-3UTR CAA 90 bp AGACTCGGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACACTCAGCATTTCCACCTaGGTGGTCTCTATGTCATCA +
Preference number: 3 (lower is better)
Translates to: RLGPARGSNQSNRPPAATLSIST*VVSMSS
Trigger: TGATGACATAGAGACCACCAAGGTGGAAATGCTGAG...TGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCCGAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR GCA 72 bp AATCCGAGACGTCATCAAGGACAGAAGGAGAGAAGCTaGGTCGGCAAAACGCTTCTCCCCGTACATACGGTG +
Preference number: 3 (lower is better)
Translates to: NPRRHQGQKERS*VGKTLLPVHTV
Trigger: CACCGTATGTACGGGGAGAAGCGTTTTGCCGACGCAGCTTCTCTCCTTCTGTCCTTGATGACGTCTCGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CCA 72 bp GGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCATaGCTAAGATCTTACAAATGCTGCGAACTCTTGGCG +
Preference number: 3 (lower is better)
Translates to: GQNPGDCCGRLS*LRSYKCCELLA
Trigger: CGCCAAGAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
3UTR-3UTR CAA 90 bp TGCGAACTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGATACTTTTGGAGGACTaGAAGGGCACCAGGAAACTG +
Preference number: 3 (lower is better)
Translates to: CELVQSSAAAHRSAAPSGILLED*KGTRKL
Trigger: CAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTAT...CCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGTTCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR GCA 72 bp GGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTaGGGACGGCTTTCATGGCTAAGATCTTACAAATGC +
Preference number: 3 (lower is better)
Translates to: GCSKRGQNPGDC*GRLSWLRSYKC
Trigger: GCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR CCA 72 bp GGTCCAGGCTGGACTGGGCATAGTAGTGCAGATCAATaGGTTTTACTGTGGGATTGGAGTACAAGAGCCGAG +
Preference number: 3 (lower is better)
Translates to: GPGWTGHSSADQ*VLLWDWSTRAE
Trigger: CTCGGCTCTTGTACTCCAATCCCACAGTAAAACCCATTGATCTGCACTACTATGCCCAGTCCAGCCTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CAA 90 bp CCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCCATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGAC +
Preference number: 3 (lower is better)
Translates to: PSKISCQRKSQHFHLGGLHAQVF*TSSPPD
Trigger: GTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATG...GAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR-3UTR CAA 90 bp GTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCAACTCATAAGTCTGTTCTGGCTGCCAACAAGATGTaGTCCAGGGGTTCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: VFLTSSPPDTASTHKSVLAANKM*SRGSGL
Trigger: CAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGC...CAGAACAGACTTATGAGTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR-3UTR CAA 90 bp ATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTTTAGCTCGATACTTTaGGAGGACTTGAAGGGCACC +
Preference number: 3 (lower is better)
Translates to: IRSTFRAFCSVFRGIRSMFSSIL*EDLKGT
Trigger: GGTGCCCTTCAAGTCCTCCAAAAGTATCGAGCTAAA...CATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR TCA 72 bp AGGGCGATGCTTTTAGCTCGATACTTTTGGAGGACTTaGAGGGCACCAGGAAACTGCCGACATCTTGCCCAA +
Preference number: 3 (lower is better)
Translates to: RAMLLARYFWRT*RAPGNCRHLAQ
Trigger: TTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTATCGAGCTAAAAGCATCGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR GCA 72 bp TCATCATCCTGGAGCTGCTCGGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTCAAGTCCTCCAGACAC +
Preference number: 3 (lower is better)
Translates to: SSSWSCSVSDSP*TGLLDVKSSRH
Trigger: GTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR CCA 72 bp GATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTaGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGG +
Preference number: 3 (lower is better)
Translates to: DFVPEKVSAFPP*WSLCHHPGAAR
Trigger: CCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR CCA 72 bp GGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCATaGCTAAGATCTTACAAATGCTGCGAACTTGTTCAG +
Preference number: 3 (lower is better)
Translates to: GQNPGDCCGRLS*LRSYKCCELVQ
Trigger: CTGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
3UTR TCA 72 bp CTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACACCGCATCAACTCATA +
Preference number: 3 (lower is better)
Translates to: LLGIRFSMHRSS*RQVLQTPHQLI
Trigger: TATGAGTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CCA 72 bp TTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTaGTCTCTATGTCATCATCCTGGAGCTGCTCGGTAT +
Preference number: 3 (lower is better)
Translates to: FVPEKVSAFPPW*SLCHHPGAARY
Trigger: ATACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
3UTR CCA 72 bp TCCCAGGAATGTCAGTCGGTCACTGAGCATCATGGCTaGCCCCAGGTTGTCAATGAGATCCAAATCAGAAAA +
Preference number: 3 (lower is better)
Translates to: SQECQSVTEHHG*PQVVNEIQIRK
Trigger: TTTTCTGATTTGGATCTCATTGACAACCTGGGGCCAGCCATGATGCTCAGTGACCGACTGACATTCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR TCA 72 bp CAGTTGCTCAGGGCGATGCTGCACTCTTTGATTACTTaGTGGATGTCAAACTCAAAGGCTGCCAACAAGATG +
Preference number: 3 (lower is better)
Translates to: QLLRAMLHSLIT*WMSNSKAANKM
Trigger: CATCTTGTTGGCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGCATCGCCCTGAGCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
3UTR GCA 72 bp CTCTTTGATTACTTGATGGATGTCAAACTCAAAGGCTaGCAACAAGATGTTGTCCAGGGGTTCTGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: LFDYLMDVKLKG*QQDVVQGFWAA
Trigger: AGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
3UTR TCA 72 bp GATACCACATTGAAGCAGTTCTCAGGAACCTTCCAGTaGGCCTTCTCTTATAATTGCCCGAGCAAGATTTCG +
Preference number: 3 (lower is better)
Translates to: DTTLKQFSGTFQ*AFSYNCPSKIS
Trigger: CGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGAGAACTGCTTCAATGTGGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
3UTR GCA 72 bp TCGGACGTTCTTCCTTTCATACCCTTCGCAATAGTGTaGTTTGTATACGAATACCTCATTTCAAATCAAGCA +
Preference number: 3 (lower is better)
Translates to: SDVLPFIPFAIV*FVYEYLISNQA
Trigger: TGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCGAAGGGTATGAAAGGAAGAACGTCCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCTGGGGGCTGCCCCCAGCCCTaGCCTGCATTGGTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AQLGAVIKVIDPQLPQAGGCPQP*PALVGA
Trigger: TGCCCCAACCAATGCAGGCCAGGGCTGGGGGCAGCC...CCCAGCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp CTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCGACCTCAGGATCCCCTaGCTCCTGCGTCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: LSTDAPREGRTQAIVADGDLRIP*LLRPTD
Trigger: GTCTGTGGGACGCAGGAGTCAGGGGATCCTGAGGTC...GCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR GCA 90 bp GCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGATGCTGCACTGAAGAGAGCCTGCCTTaGTTGGCTGCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AGLSGGPQTTSCSGRCCTEESLP*LAAPSP
Trigger: AGGGCTGGGGGCAGCCAAGCAAGGCAGGCTCTCTTC...AGTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCTGGGTTGTCCAGGGGTTCTaGGCTGCTCTCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPARGSNQSNRPPAATGWVVQGF*AALTSQ
Trigger: CTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAAC...CCAGCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR CCA 90 bp CAGTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGCCACAGACAGTAGGCTaGGAGCAGGGCCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: QSSAAAHRSAAPSGLSARPQTVG*EQGQLT
Trigger: GGTGAGCTGGCCCTGCTCCCAGCCTACTGTCTGTGG...CCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CCA 90 bp TCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGCCCAGCCTGGCCTGCATTGGTTaGGGCAGGGGCCCATGTTCG +
Preference number: 4 (lower is better)
Translates to: SVFRGIRSMCSSRETRPSLACIG*GRGPCS
Trigger: CGAACATGGGCCCCTGCCCCAACCAATGCAGGCCAG...GCTGGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp TTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGAGAGCCTGCCTTGCTTaGCTGCCCCCAGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FCSVFRGIRSMCSSRETRRACLA*LPPALA
Trigger: GGCCAGGGCTGGGGGCAGCCAAGCAAGGCAGGCTCT...CCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp ATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCTGCCACAGGCTGGGATaGGCAAACAGTCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: ICRCSQIRSTFRAFCSVFCHRLG*ANSPEA
Trigger: CGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGGCA...GAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp TCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGCCCAGCGGATCCCCTGACTCCTaGGTCCCACAGACAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SVFRGIRSMCSSRETRPSGSPDS*VPQTVG
Trigger: GCCTACTGTCTGTGGGACGCAGGAGTCAGGGGATCC...GCTGGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR TCA 90 bp TGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGATGCTGCACTCTTTGATCTCCAGTGTGGCTCGTaGGGAGGAGGATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CQVGHKPPVAQGDAALFDLQCGS*GGGWLG
Trigger: CCCCAGCCATCCTCCTCCTCACGAGCCACACTGGAG...ATCAAAGAGTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR GCA 90 bp CCACAGGCTGGGATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCCTCGTGCCAGTGCTaGCACTTCAGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PQAGMSKQSRGVLQQEELSSCQC*HFSSSS
Trigger: AGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGA...GAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp GCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGATGCTGCACTGGTATCCGCTCAATGTaGAGCTCCAGGGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: AGLSGGPQTTSCSGRCCTGIRSM*SSRETR
Trigger: CCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACC...AGTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR GCA 90 bp CAGTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTCAGTCATCTGCCGCTaGTCACAGATCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: QSSAAAHRSAAPSGLSARSVICR*SQIRST
Trigger: GGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGA...CCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp GGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCTGGAGGGCACCAGGAAACTaGCGACATCTTGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: GPARGSNQSNRPPAATGWRAPGN*RHLAQL
Trigger: GAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCT...CCAGCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR CCA 90 bp GTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGACCCAGTCAAGGAGATaGAGGAGGAGAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VICRCSQIRSTFRAFCSVTQSRR*RRRGPA
Trigger: AGCTGGCCCTCTCCTCCTCCATCTCCTTGACTGGGT...CACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CCA 90 bp GTGGCAAAGGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGACTCCAGGTGAGGGCTaGTGGCGAATGTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VAKAASLARMLQERAEPRTPGEG*WRMCCP
Trigger: AGGACAGCACATTCGCCACCAGCCCTCACCTGGAGT...CCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTTTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp CTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTGGAGGAGCTTGCAGTaGTCCAGCAGGTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSTDAPREGRTQAIVADGWRSLQ*SSRSVR
Trigger: CCTGACAGACCTGCTGGACCACTGCAAGCTCCTCCA...GCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CCA 90 bp ATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACTCCACCTCGCACACATaGAGCCGGACCCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: ILSTDAPREGRTQAIVADSTSHT*SRTQSR
Trigger: CCTTGACTGGGTCCGGCTCCATGTGTGCGAGGTGGA...GTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CCA 90 bp GGCAATCCGAGACGTCATCAAGGACAGAAGGAGAGAAGCTGCGTCGGCAAAACGCTGCAGAGGCGGGGCTaGCATCGGCTTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GNPRRHQGQKERSCVGKTLQRRG*HRLPWR
Trigger: TCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAG...CGTTTTGCCGACGCAGCTTCTCTCCTTCTGTCCTTGATGACGTCTCGGATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp ACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCTCATGTTGGAACCGAAATTGCCACAGGCTGGGATaGGCAAACAGTCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: TVPRRTPAGGTLSCWNRNCHRLG*ANSPEA
Trigger: CGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGGCA...ATTTCGGTTCCAACATGAGAGAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp GGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGCCACAAACCACCAGTTaGTCAGGGCGATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GILSTDAPREGRTQAIVAPQTTS*SGRCCT
Trigger: AGTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGG...CGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AAAGGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTGACTGGAGGAGCTTaGAGTGGTCCAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KGGILSTDAPREGRTQAIVTGGA*SGPAGL
Trigger: CAGACCTGCTGGACCACTGCAAGCTCCTCCAGTCAC...AATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR GCA 90 bp TCACCTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTCAGTCATCTGCCGCTaGTCACAGATCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: SPCSVICRCSQIRSTFRASVICR*SQIRST
Trigger: GGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGA...AGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR GCA 90 bp AGGTCCCCCATGATTCGGCATATGCCTGCAGAGGCGGGGCTGGCATCGGCTTCCGAAAACCACTGCTGCTaGAACCTTCACCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RSPMIRHMPAEAGLASASENHCC*NLHLFL
Trigger: CAGAAACAGGTGAAGGTTGCAGCAGCAGTGGTTTTC...GGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATCATGGGGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp CTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCGAGGAGAGGGCCAGCTaGGGCCACTTCAATAAAAAG +
Preference number: 4 (lower is better)
Translates to: LSTDAPREGRTQAIVADGEERAS*GHFNKK
Trigger: CTTTTTATTGAAGTGGCCCCAGCTGGCCCTCTCCTC...GCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CCA 90 bp GCTGTCCTGGAGGTACCGCTCACATTCCTCGTGCCAGTGCTGCCACTTCAGCTCAGCTCTGTCAGTGTCTaGGTGTTCCCGGGACTAAGA +
Preference number: 4 (lower is better)
Translates to: AVLEVPLTFLVPVLPLQLSSVSV*VFPGLR
Trigger: TCTTAGTCCCGGGAACACCCAGACACTGACAGAGCT...GAGCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCGGTACCTCCAGGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATGGAGGAGCTTGCAGTaGTCCAGCAGGTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AAHRSAAPSGLSARCSEVWRSLQ*SSRSVR
Trigger: CCTGACAGACCTGCTGGACCACTGCAAGCTCCTCCA...TACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CCA 90 bp CTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTCCCCGTACATACGGTaGAACTCGCGATACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSTDAPREGRTQAIVADGSPYIR*NSRYFP
Trigger: GGGAAAGTATCGCGAGTTCCACCGTATGTACGGGGA...GCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp TGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTTGGAGACCTGGCTGCTaGACTGGCGGCCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: CPSKISCQRKSQHFHLGGWRPGC*TGGHWL
Trigger: CAGCCAATGGCCGCCAGTTCAGCAGCCAGGTCTCCA...ACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp AGTGGTCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGAGAAATAGAGGTTGTGTaGCTGGAGGAGCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGPAGLSGGPQTTSCSGREIEVV*LEELAV
Trigger: CACTGCAAGCTCCTCCAGTCACACAACCTCTATTTC...TCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR TCA 90 bp CCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTGCCACAGGCTGGGATaGGCAAACAGTCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: PSKISCQRKSQHFHLGGLCHRLG*ANSPEA
Trigger: CGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGGCA...GAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp TCCGAGACGTCATCAAGGACAGAAGGAGAGAAGCTGCGTCGGCAAAACGCTTCTCCTGAGGAACCTGTCTaGCACGAGCGTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SETSSRTEGEKLRRQNASPEEPV*HERGKG
Trigger: GCCTTTGCCACGCTCGTGTCAGACAGGTTCCTCAGG...AGAAGCGTTTTGCCGACGCAGCTTCTCTCCTTCTGTCCTTGATGACGTCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp ATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCGCTCACAGTAATCCCTaGGGAACCTGTCTGACACGA +
Preference number: 4 (lower is better)
Translates to: ICRCSQIRSTFRAFCSVFAHSNP*GTCLTR
Trigger: TCGTGTCAGACAGGTTCCTCAGGGATTACTGTGAGC...GAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp TTGCAGTGGTCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGGTAGGCATAAAGTGTaGCCTCAGGATCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: LQWSSRSVRWATNHQLLRGRHKV*PQDPLT
Trigger: AGTCAGGGGATCCTGAGGTCACACTTTATGCCTACC...CCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGACCACTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR GCA 90 bp GGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTACTGCCCAGAACATCTaGCGACAAACTGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GGILSTDAPREGRTQAIVTAQNI*RQTVHL
Trigger: GAGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGT...AACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR GCA 90 bp GTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGGGCTGGTGGCGAATGTaGTGTCCTGGAGGTACCGCT +
Preference number: 4 (lower is better)
Translates to: VSAFPPWWSLCHHPGAARGWWRM*CPGGTA
Trigger: AGCGGTACCTCCAGGACAGCACATTCGCCACCAGCC...CCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp GCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCACCAGGGGTTCTGGGCTaGTCTCACCTCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: AAPSGLSARCSEVSAQCAPGVLG*SHLPET
Trigger: TGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGG...TGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR GCA 90 bp CTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCACCTTCAGGGCTTTCTaGTCGGTGTTCAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: LSTDAPREGRTQAIVADGTFRAF*SVFRGI
Trigger: GATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGT...GCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AAGGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGACTTGTTCAGTCATCTaGCGCTGCTCACAGATCCGC +
Preference number: 4 (lower is better)
Translates to: KAASLARMLQERAEPRRLTCSVI*RCSQIR
Trigger: GCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGT...CAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AGACTCGGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAAACCCAGGCGATTGTTaGGGACGGCTTTCATGGCTA +
Preference number: 4 (lower is better)
Translates to: RLGPARGSNQSNRPPAATNPGDC*GRLSWL
Trigger: TAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTT...TGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCCGAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp CAGGCTGGGATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCTCCAGCTGTTTCCTCTTaGCAGACAGCAAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: QAGMSKQSRGVLQQEELSPAVSS*QTARNW
Trigger: CCAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGG...AGAGAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATCCCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR CCA 90 bp GATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCTCATGTTGGACCTGGCTGCTGAACTaGCGGCCATTGGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: DEQTVPRRTPAGGTLSCWTWLLN*RPLAGS
Trigger: AGATCCAGCCAATGGCCGCCAGTTCAGCAGCCAGGT...CCAACATGAGAGAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GTGGGCCACAAACCACCAGTTGCTCAGGGCGATGCTGCACTCTTTGATTACTTGGTTGTCCAGGGGTTCTaGGCTGCTCTCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VGHKPPVAQGDAALFDYLVVQGF*AALTSQ
Trigger: CTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAAC...CAAGTAATCAAAGAGTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR CCA 90 bp CCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGAGCAGGTCTGTCAGGTaGGCCACAAACCACCAGTTG +
Preference number: 4 (lower is better)
Translates to: PQHLQGFLLGVQRYPLNVSRSVR*ATNHQL
Trigger: CAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCT...CACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CCA 90 bp AGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGGAGGAGCTTGCAGTaGTCCAGCAGGTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSAAPSGLSARCSEVSAQWRSLQ*SSRSVR
Trigger: CCTGACAGACCTGCTGGACCACTGCAAGCTCCTCCA...TTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CCA 90 bp AGGTCCCCCATGATTCGGCATATGCCTGCAGAGGCGGGGCTGGCATCGGCTTCCGCATTTCCACCTTGGTaGTCTCTATGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: RSPMIRHMPAEAGLASASAFPPW*SLCHHP
Trigger: AGGATGATGACATAGAGACCACCAAGGTGGAAATGC...GGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATCATGGGGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp AGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAAAATGCTGCGAACTCTTaGCGTCCACAGCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: RSAAPSGLSARCSEVSAQNAANS*RPQPHV
Trigger: GACGTGGGGCTGTGGACGCCAAGAGTTCGCAGCATT...TTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR GCA 90 bp AGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTTGCTTGGATTCTCACTaGCCAGAACATCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: STDAPREGRTQAIVADGFCLDSH*PEHLPT
Trigger: TGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCA...AAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR GCA 90 bp CGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCTCATCCAGCCGGCCCTaGAGCACCAAGATGGTCACC +
Preference number: 4 (lower is better)
Translates to: RYQILHAQVFLTSSPPDTSSSRP*STKMVT
Trigger: GGTGACCATCTTGGTGCTGCAGGGCCGGCTGGATGA...GGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp CCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCGATTCGGCATATGCCTaGAGAGGCGGGGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: PSKISCQRKSQHFHLGGLDSAYA*RGGAGI
Trigger: GATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATC...GAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp AGAGTCATCCAGAAAGACCGAGGGGCAATCCGAGACGTCATCAAGGACAGAAGGCATTCCTCGTGCCAGTaGTGCCACTTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RVIQKDRGAIRDVIKDRRHSSCQ*CHFSSS
Trigger: GCTGGAGCTGAAGTGGCAGCACTGGCACGAGGAATG...CCTTCTGTCCTTGATGACGTCTCGGATTGCCCCTCGGTCTTTCTGGATGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp AGAGTCATCCAGAAAGACCGAGGGGCAATCCGAGACGTCATCAAGGACAGAAGGCGCTCACATTCCTCGTaGCAGTGCTGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: RVIQKDRGAIRDVIKDRRRSHSS*QCCHFS
Trigger: GCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCG...CCTTCTGTCCTTGATGACGTCTCGGATTGCCCCTCGGTCTTTCTGGATGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp CTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGCTCAGAAGTTCCTTCTaGTCTAACAAGGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: LPLLTDPQHLQGFLLGVQLRSSF*SNKAAS
Trigger: CGAAGCTGCCTTGTTAGAGCAGAAGGAACTTCTGAG...CTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCATGGCTAAGATCTTACGTGACTGGAGGAGCTTaGAGTGGTCCAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RGQNPGDCCGRLSWLRSYVTGGA*SGPAGL
Trigger: CAGACCTGCTGGACCACTGCAAGCTCCTCCAGTCAC...GTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AGACTCGGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAACCTTCAGGGCTTTCTaGTCGGTGTTCAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: RLGPARGSNQSNRPPAATTFRAF*SVFRGI
Trigger: GATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGT...TGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCCGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp TTGCAGTGGTCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGACCTTCAGGGCTTTCTaGTCGGTGTTCAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: LQWSSRSVRWATNHQLLRTFRAF*SVFRGI
Trigger: GATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGT...CCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGACCACTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp CACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTAACCCAGGCGATTGTTaGGGACGGCTTTCATGGCTA +
Preference number: 4 (lower is better)
Translates to: HRSAAPSGLSARCSEVSANPGDC*GRLSWL
Trigger: TAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTT...AGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp GCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCACCTTGTTCAGTCATCTaGCGCTGCTCACAGATCCGC +
Preference number: 4 (lower is better)
Translates to: AAPSGLSARCSEVSAQCAPCSVI*RCSQIR
Trigger: GCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGG...TGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CCA 90 bp TCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGCCCAGCGCTGTCATGTTTGCTTaGATTCTCACTGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SVFRGIRSMCSSRETRPSAVMFA*ILTAQN
Trigger: GTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGC...GCTGGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CCA 90 bp TCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGGAAACAGGTCCAGGCTaGACTGGGCATAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: SGLSARCSEVSAQCAAPGETGPG*TGHSSA
Trigger: TGCACTACTATGCCCAGTCCAGCCTGGACCTGTTTC...CCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCTCATGTTGGAGCAGGTCTGTCAGGTaGGCCACAAACCACCAGTTG +
Preference number: 4 (lower is better)
Translates to: DEQTVPRRTPAGGTLSCWSRSVR*ATNHQL
Trigger: CAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCT...CCAACATGAGAGAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR TCA 90 bp TTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: FCSVFRGIRSMCSSRETRMHRSS*RQVLQT
Trigger: TGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCAT...CCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp GTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGCCACAAACCACCAGTTaGTCAGGGCGATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VSAFPPWWSLCHHPGAARPQTTS*SGRCCT
Trigger: AGTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGG...CCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp TGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTGTGACTGGAGGAGCTTaGAGTGGTCCAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: CPSKISCQRKSQHFHLGGVTGGA*SGPAGL
Trigger: CAGACCTGCTGGACCACTGCAAGCTCCTCCAGTCAC...ACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp GAGACTCCAGGTGAGGGCTGGTGGCGAATGTGCTGTCCTGGAGGTACCGCTCACAAAGAAAACCACTGCTaGTGCAACCTTCACCTGTTT +
Preference number: 4 (lower is better)
Translates to: ETPGEGWWRMCCPGGTAHKENHC*CNLHLF
Trigger: AAACAGGTGAAGGTTGCAGCAGCAGTGGTTTTCTTT...GTGAGCGGTACCTCCAGGACAGCACATTCGCCACCAGCCCTCACCTGGAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTCTTCGTCAATTCTCTaGAGGCCCAGAAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: VICRCSQIRSTFRAFCSVSSSIL*RPRKIP
Trigger: TGGAATCTTTCTGGGCCTCCAGAGAATTGACGAAGA...CACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp TACAAATGCTGCGAACTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCAGCATGGCATCGGCTTCCTTaGAGAGCATCTGTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: YKCCELVQSSAAAHRSAAWHRLP*RASVGP
Trigger: AGGCCCGACAGATGCTCTCCAAGGAAGCCGATGCCA...TGCTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGTTCGCAGCATTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAACTGAGCATCATGGCTaGCCCCAGGTTGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: AAPSGLSARCSEVSAQCATEHHG*PQVVNE
Trigger: CTCATTGACAACCTGGGGCCAGCCATGATGCTCAGT...TGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp TGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCCCTGCAGCACCAAGATaGTCACCTGGGGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: WSCSVSDSPCTGLLDVKSPAAPR*SPGATS
Trigger: TGAAGTGGCCCCAGGTGACCATCTTGGTGCTGCAGG...GGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp AAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCAGCCCTGGCCTGCATTaGTTGGGGCAGGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: KISCQRKSQHFHLGGLYVSPGLH*LGQGPM
Trigger: CATGGGCCCCTGCCCCAACCAATGCAGGCCAGGGCT...GACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CAA 72 bp GCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATaGTTGCGGACGGCTTTCATGGCTAAGATCTTACAA +
Preference number: 4 (lower is better)
Translates to: ARMLQERAEPRR*LRTAFMAKILQ
Trigger: TTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR CAA 72 bp GTCAGTCGGTCACTGAGCATCATGGCTGGCCCCAGGTaGTCAATGAGATCCAAATCAGAAAAGCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: VSRSLSIMAGPR*SMRSKSEKQPR
Trigger: GCGAGGCTGCTTTTCTGATTTGGATCTCATTGACAACCTGGGGCCAGCCATGATGCTCAGTGACCGACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CAA 72 bp TCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTaGCTCAGGGCGATGCTTTTAGCTCGATACTTTTGG +
Preference number: 4 (lower is better)
Translates to: SSRSVRWATNHQ*LRAMLLARYFW
Trigger: CCAAAAGTATCGAGCTAAAAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR TCA 90 bp CTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCCGATGCTGCACTCTTTaGTTACTTGATGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: LSTDAPREGRTQAIVADGRCCTL*LLDGCQ
Trigger: TTGACATCCATCAAGTAATCAAAGAGTGCAGCATCG...GCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR TCA 90 bp TCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGATGCTGCGATGCTGCACTCTTTaGTTACTTGATGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: SSRSVRWATNHQLLRAMLRCCTL*LLDGCQ
Trigger: TTGACATCCATCAAGTAATCAAAGAGTGCAGCATCG...CAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR TCA 90 bp AAAGGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTTGTTTGTTTCCTGTGTaGGTCTGGAATCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KGGILSTDAPREGRTQAICLFPV*VWNPRE
Trigger: CTCTCTGGGATTCCAGACTCACACAGGAAACAAACA...AATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp GGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTAGAAGCTGTCATGTTTaGTTGGATTCTCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GGILSTDAPREGRTQAIVRSCHV*LDSHCP
Trigger: TGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCT...AACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR GCA 90 bp ATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACCTCAGAAGTTCCTTCTaGTCTAACAAGGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: ILSTDAPREGRTQAIVADLRSSF*SNKAAS
Trigger: CGAAGCTGCCTTGTTAGAGCAGAAGGAACTTCTGAG...GTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AGAGTCATCCAGAAAGACCGAGGGGCAATCCGAGACGTCATCAAGGACAGAAGGAACCCAGGCGATTGTTaGGGACGGCTTTCATGGCTA +
Preference number: 4 (lower is better)
Translates to: RVIQKDRGAIRDVIKDRRNPGDC*GRLSWL
Trigger: TAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTT...CCTTCTGTCCTTGATGACGTCTCGGATTGCCCCTCGGTCTTTCTGGATGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp AAGGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGGCCTTCTCTTATAATTaGCCGAGCAAGATTTCGTGC +
Preference number: 4 (lower is better)
Translates to: KAASLARMLQERAEPRRLAFSYN*PSKISC
Trigger: GCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGC...CAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp GGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGCTAAGATCTTACAAATaGTGCGAACTCTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GILSTDAPREGRTQAIVALRSYK*CELLAS
Trigger: GGACGCCAAGAGTTCGCAGCATTTGTAAGATCTTAG...CGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CCA 90 bp TCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGCCCAGCGGAACTCTCTCATGTTaGAACCGAAATAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SVFRGIRSMCSSRETRPSGTLSC*NRNRGC
Trigger: ACAACCTCTATTTCGGTTCCAACATGAGAGAGTTCC...GCTGGGCCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CCA 90 bp AGGGCACCAGGAAACTGCCGACATCTTGCCCAACTCCCAGTGAAGTGCACCCCATGCGGACGGCTTTCATaGCTAAGATCTTACAAATGC +
Preference number: 4 (lower is better)
Translates to: RAPGNCRHLAQLPVKCTPCGRLS*LRSYKC
Trigger: GCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCA...TGGGGTGCACTTCACTGGGAGTTGGGCAAGATGTCGGCAGTTTCCTGGTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR CCA 90 bp GCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGTGCGGACGGCTTTCATaGCTAAGATCTTACAAATGC +
Preference number: 4 (lower is better)
Translates to: AASLARMLQERAEPRRLLCGRLS*LRSYKC
Trigger: GCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCA...CAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CCA 90 bp GTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTCAGCATTTCCACCTTaGTGGTCTCTATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: VICRCSQIRSTFRAFCSVSAFPP*WSLCHH
Trigger: ATGATGACATAGAGACCACCAAGGTGGAAATGCTGA...CACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CAA 72 bp CGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTaGCGGACGGCTTTCATGGCTAAGATCTTACAAATG +
Preference number: 4 (lower is better)
Translates to: RMLQERAEPRRL*RTAFMAKILQM
Trigger: CATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR CAA 72 bp CAGGGCGATGCTTTTAGCTCGATACTTTTGGAGGACTaGAAGGGCACCAGGAAACTGCCGACATCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QGDAFSSILLED*KGTRKLPTSCP
Trigger: TGGGCAAGATGTCGGCAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTATCGAGCTAAAAGCATCGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR CAA 72 bp CCAGTTGCTCAGGGCGATGCTTTTAGCTCGATACTTTaGGAGGACTTGAAGGGCACCAGGAAACTGCCGACA +
Preference number: 4 (lower is better)
Translates to: PVAQGDAFSSIL*EDLKGTRKLPT
Trigger: TGTCGGCAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTATCGAGCTAAAAGCATCGCCCTGAGCAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR TCA 90 bp GTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACATCATCAGGTCCCCCATaGTTCGGCATATGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VVSMSSSWSCSVSDSPCTSSGPP*FGICLQ
Trigger: CTGCAGGCATATGCCGAATCATGGGGGACCTGATGA...TGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGATGACATAGAGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp GAAGGAGAGAAGCTGCGTCGGCAAAACGCTTCTCCCCGTACATACGGTGGAACTGCCCCAGGTTGTCAATaGGATCCAAATCAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: EGEKLRRQNASPRTYGGTAPGCQ*DPNQKS
Trigger: GCTTTTCTGATTTGGATCTCATTGACAACCTGGGGC...AGTTCCACCGTATGTACGGGGAGAAGCGTTTTGCCGACGCAGCTTCTCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp AACCCAGGCGATTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCTTGCCCAACTCCCAGTaGAGTGCACCCCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: NPGDCCGRLSWLRSYKCCLPNSQ*SAPQLF
Trigger: AAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAA...GCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR GCA 90 bp CCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAACCAGGGGTTCTGGGCTaGTCTCACCTCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: PSSEPSLIIARARFRAREPGVLG*SHLPET
Trigger: TGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGG...TTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp TTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGAGACTCGGGTCAAACTCAAAGGCTaGCAACAAGATGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: FCSVFRGIRSMCSSRETRVKLKG*QQDVVQ
Trigger: CTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGAC...CCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR GCA 90 bp CAGGGCGATGCTGCACTCTTTGATTACTTGATGGATGTCAAACTCAAAGGCTGCGGTATCCGCTCAATGTaGAGCTCCAGGGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: QGDAALFDYLMDVKLKGCGIRSM*SSRETR
Trigger: CCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACC...GCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGCATCGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR GCA 90 bp CTTACAAATGCTGCGAACTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCAGACTTGTTCAGTCATCTaGCGCTGCTCACAGATCCGC +
Preference number: 4 (lower is better)
Translates to: LTNAANLFSHLPLLTDPQTCSVI*RCSQIR
Trigger: GCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGT...CTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGTTCGCAGCATTTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp TCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCCAGAAGGAGAGAAGCTaGGTCGGCAAAACGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SDSPCTGLLDVKSSRHRIQKERS*VGKTLL
Trigger: GAGAAGCGTTTTGCCGACGCAGCTTCTCTCCTTCTG...GATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp AGGTCCCCCATGATTCGGCATATGCCTGCAGAGGCGGGGCTGGCATCGGCTTCCCAGTCAAAATACATTTaGTTCTTCTTGGAATTCACG +
Preference number: 4 (lower is better)
Translates to: RSPMIRHMPAEAGLASASQSKYI*FFLEFT
Trigger: CGTGAATTCCAAGAAGAACCAAATGTATTTTGACTG...GGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATCATGGGGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp CAGGAACCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCGCGAATGTGCTGTCCTaGAGGTACCGCTCACATTCC +
Preference number: 4 (lower is better)
Translates to: QEPSSEPSLIIARARFRAANVLS*RYRSHS
Trigger: GGAATGTGAGCGGTACCTCCAGGACAGCACATTCGC...GGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp CACTTCAGCTCCAGCTCTGTCAGTGTCTGGGTGTTCCCGGGACTAAGAATGGGCGTTTTACTGTGGGATTaGAGTACAAGAGCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: HFSSSSVSVWVFPGLRMGVLLWD*STRAES
Trigger: TGACTCGGCTCTTGTACTCCAATCCCACAGTAAAAC...GCCCATTCTTAGTCCCGGGAACACCCAGACACTGACAGAGCTGGAGCTGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GGCCAGCTCACCTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTAGTAGTGCAGATCAATaGGTTTTACTGTGGGATTGG +
Preference number: 4 (lower is better)
Translates to: GQLTLFSHLPLLTDPQHLSSADQ*VLLWDW
Trigger: CCAATCCCACAGTAAAACCCATTGATCTGCACTACT...AAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGGTGAGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CCA 90 bp GCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGGGAACTCTCTCATGTTaGAACCGAAATAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AASLARMLQERAEPRRLLGTLSC*NRNRGC
Trigger: ACAACCTCTATTTCGGTTCCAACATGAGAGAGTTCC...CAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR TCA 90 bp AAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCAAGAGAGACTCCAGGTaGGGGCTGGTGGCGAATGTG +
Preference number: 4 (lower is better)
Translates to: KISCQRKSQHFHLGGLYVKRDSR*GLVANV
Trigger: CACATTCGCCACCAGCCCTCACCTGGAGTCTCTCTT...GACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp GATGTCAAACTCAAAGGCTGCCAACAAGATGTTGTCCAGGGGTTCTGGGCTGCTGAAATAGAGGTTGTGTaGCTGGAGGAGCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: DVKLKGCQQDVVQGFWAAEIEVV*LEELAV
Trigger: CACTGCAAGCTCCTCCAGTCACACAACCTCTATTTC...AGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR TCA 90 bp TTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCATCATATGTCAGTCGGTCACTaGGCATCATGGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FVPEKVSAFPPWWSLCHHMSVGH*ASWLAP
Trigger: TGGGGCCAGCCATGATGCTCAGTGACCGACTGACAT...ATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp TCATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SSWSCSVSDSPCTGLLDVMHRSS*RQVLQT
Trigger: TGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCAT...GACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp ATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGAAGCTGCACTCTTTaGTTACTTGATGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: ILSTDAPREGRTQAIVADGSCTL*LLDGCQ
Trigger: TTGACATCCATCAAGTAATCAAAGAGTGCAGCTTCC...GTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR GCA 90 bp CTGCCACAGGCTGGGATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTAAGATCTTACAAATaGTGCGAACTTGTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LPQAGMSKQSRGVLQQEELRSYK*CELVQS
Trigger: TGACTGAACAAGTTCGCAGCATTTGTAAGATCTTAG...TTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AGTGGTCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGACTAAGATCTTACAAATaGTGCGAACTTGTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: SGPAGLSGGPQTTSCSGRLRSYK*CELVQS
Trigger: TGACTGAACAAGTTCGCAGCATTTGTAAGATCTTAG...TCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp TGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGACAGAAGGAGAGAAGCTaGGTCGGCAAAACGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CSVSDSPCTGLLDVKSSRQKERS*VGKTLL
Trigger: GAGAAGCGTTTTGCCGACGCAGCTTCTCTCCTTCTG...TCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578987.1
ENST00000581104.5
CDS-3UTR GCA 90 bp ATCTTACAAATGCTGCGAACTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCCAACTCCCAGTGAAGTaGACCCCAGCTGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ILQMLRTCSVICRCSQIRQLPVK*TPAVSS
Trigger: AGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTG...GCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGTTCGCAGCATTTGTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR CCA 90 bp ATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCGGACGGCTTTCATaGCTAAGATCTTACAAATGC +
Preference number: 4 (lower is better)
Translates to: IRSTFRAFCSVFRGIRSMCGRLS*LRSYKC
Trigger: GCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCA...CATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
3UTR CAA 72 bp GCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGACACCGCATCAACTCAT +
Preference number: 4 (lower is better)
Translates to: AARYQILHAQVF*TSSPPDTASTH
Trigger: ATGAGTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp TCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCCACACAGGTTCCAGATaGGCTCCATTGCTGACAAAA +
Preference number: 4 (lower is better)
Translates to: SDSPCTGLLDVKSSRHRIHTGSR*APLLTK
Trigger: TTTTGTCAGCAATGGAGCTCATCTGGAACCTGTGTG...GATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp TGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGAATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: CSVSDSPCTGLLDVKSSRMHRSS*RQVLQT
Trigger: TGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCAT...TCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp AGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCATGGCTAAGATCTTACTCAGGAACCTTCCAGTaGGCCTTCTCTTATAATTGC +
Preference number: 4 (lower is better)
Translates to: RGQNPGDCCGRLSWLRSYSGTFQ*AFSYNC
Trigger: GCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGA...GTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp TTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGAACTTGTTCAGGTATCCGCTCAATGTaGAGCTCCAGGGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: LLRTAFMAKILQMLRTCSGIRSM*SSRETR
Trigger: CCGAGTCTCCCTGGAGCTGCACATTGAGCGGATACC...TGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp GATGTCAAACTCAAAGGCTGCCAACAAGATGTTGTCCAGGGGTTCTGGGCTGCTTCATCATCCTGGAGCTaGTCGGTATCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: DVKLKGCQQDVVQGFWAASSSWS*SVSDSP
Trigger: TGGAGAATCTGATACCGAGCAGCTCCAGGATGATGA...AGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp CAGGGCGATGCTTTTAGCTCGATACTTTTGGAGGACTTGAAGGGCACCAGGAAAAAACTGCCGACATCTTaGCCAACTCCCAGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: QGDAFSSILLEDLKGTRKKLPTS*PTPSEV
Trigger: CACTTCACTGGGAGTTGGGCAAGATGTCGGCAGTTT...TTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTATCGAGCTAAAAGCATCGCCCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR CCA 90 bp AGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCGACAAAATGGAGACCTaGCTGCTGAACTGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SEPSLIIARARFRARESLDKMET*LLNWRP
Trigger: TGGCCGCCAGTTCAGCAGCCAGGTCTCCATTTTGTC...GAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp ATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGAGTAGTGCAGATCAATaGGTTTTACTGTGGGATTGG +
Preference number: 4 (lower is better)
Translates to: IRSTFRAFCSVFRGIRSMSSADQ*VLLWDW
Trigger: CCAATCCCACAGTAAAACCCATTGATCTGCACTACT...CATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR CCA 90 bp AATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTTCCCCGTACATACGGTaGAACTCGCGATACTTTCCC +
Preference number: 4 (lower is better)
Translates to: NCPSKISCQRKSQHFHLGSPYIR*NSRYFP
Trigger: GGGAAAGTATCGCGAGTTCCACCGTATGTACGGGGA...ACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579900.5
ENST00000581104.5
CDS-3UTR CCA 90 bp GCTTTCATGGCTAAGATCTTACAAATGCTGCGAACTTGTTCAGTCATCTGCCGCCAGACAGCAAGGAACTaGCCCGTCTTCAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AFMAKILQMLRTCSVICRQTARN*PVFRGS
Trigger: GCTTCCTCTGAAGACGGGCCAGTTCCTTGCTGTCTG...GCGGCAGATGACTGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580879.5
3UTR CAA 72 bp AGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTaGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RFRARESLSIST*VVSMSSSWSCS
Trigger: CGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp CAGGGCGATGCTGCACTCTTTGATTACTTGATGGATGTCAAACTCAAAGGCTGCGAAATAGAGGTTGTGTaGCTGGAGGAGCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QGDAALFDYLMDVKLKGCEIEVV*LEELAV
Trigger: CACTGCAAGCTCCTCCAGTCACACAACCTCTATTTC...GCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGCATCGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR TCA 90 bp CATCATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCAGGAACCTTCCAGTaGGCCTTCTCTTATAATTGC +
Preference number: 4 (lower is better)
Translates to: HHPGAARYQILHAQVFLTSGTFQ*AFSYNC
Trigger: GCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGA...CGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp AGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCATGGCTAAGATCTTACACAAAGATACCACATTaGAGCAGTTCTCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: RGQNPGDCCGRLSWLRSYTKIPH*SSSQEP
Trigger: AGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGT...GTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp GCTGGCCCCAGGTTGTCAATGAGATCCAAATCAGAAAAGCAGCCTCGCTCACAGATAAGTCTGTTCTGCTaGGAAAATCACCTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: AGPRLSMRSKSEKQPRSQISLFC*ENHLGK
Trigger: CTTCCCTAGGTGATTTTCTCAGCAGAACAGACTTAT...CTGTGAGCGAGGCTGCTTTTCTGATTTGGATCTCATTGACAACCTGGGGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp GCATTTCCACCTTGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCAGGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: AFPPWWSLCHHPGAARYQVSDSP*TGLLDV
Trigger: GACGTCAAGAAGACCTGTGCATGGAGAATCTGATAC...CTGATACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CCA 90 bp TGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTTGGAATTCACGCCTaGAATCAAAGTGACTGTTGG +
Preference number: 4 (lower is better)
Translates to: CPSKISCQRKSQHFHLGGLGIHA*NQSDCW
Trigger: CCAACAGTCACTTTGATTCCAGGCGTGAATTCCAAG...ACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp CCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCGCATTTCCACCTTGGTaGTCTCTATGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: PSKISCQRKSQHFHLGGLAFPPW*SLCHHP
Trigger: AGGATGATGACATAGAGACCACCAAGGTGGAAATGC...GAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp GGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAAACATGCTCTGATGACTaGTCGGTAGTTTTTACTCAC +
Preference number: 4 (lower is better)
Translates to: GQNPGDCCGRLSWLRSYKTCSDD*SVVFTH
Trigger: GTGAGTAAAAACTACCGATCAGTCATCAGAGCATGT...TTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp GCATTTCCACCTTGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCAGACAAAGATACCACATTaGAGCAGTTCTCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: AFPPWWSLCHHPGAARYQTKIPH*SSSQEP
Trigger: AGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGT...CTGATACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR GCA 90 bp AGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCTCATGTTGGAACCAGATCTTACAAATGCTaGGAACTTGTTCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: SKQSRGVLQQEELSHVGTRSYKC*ELVQSS
Trigger: AGATGACTGAACAAGTTCGCAGCATTTGTAAGATCT...GGTTCCAACATGAGAGAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCAGATCTTACAAATGCTaGGAACTTGTTCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: STFRAFCSVFRGIRSMCSRSYKC*ELVQSS
Trigger: AGATGACTGAACAAGTTCGCAGCATTTGTAAGATCT...GCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR GCA 90 bp AATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTTCATCATCCTGGAGCTaGTCGGTATCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: NCPSKISCQRKSQHFHLGSSSWS*SVSDSP
Trigger: TGGAGAATCTGATACCGAGCAGCTCCAGGATGATGA...ACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CCA 90 bp AGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCAAATCAAAGTGACTGTTaGCTCGCCATCGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RFRARESLSISTLVVSMSNQSDC*LAIELL
Trigger: GAGGAGCTCGATGGCGAGCCAACAGTCACTTTGATT...TGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp TGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGAGCAGCAATTGCAACCTaGTGCATTTCCTCCATACAT +
Preference number: 4 (lower is better)
Translates to: CSVSDSPCTGLLDVKSSRAAIAT*CISSIH
Trigger: ATGTATGGAGGAAATGCACCAGGTTGCAATTGCTGC...TCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp AACCCAGGCGATTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGTTTTACTGTGGGATTaGAGTACAAGAGCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: NPGDCCGRLSWLRSYKCCVLLWD*STRAES
Trigger: TGACTCGGCTCTTGTACTCCAATCCCACAGTAAAAC...GCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR CCA 90 bp TGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGAGCATTTCCACCTTGGTaGTCTCTATGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: CSVSDSPCTGLLDVKSSRAFPPW*SLCHHP
Trigger: AGGATGATGACATAGAGACCACCAAGGTGGAAATGC...TCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp CCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCCTCACTCGAACCAATTaGGATTTTCTGGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSKISCQRKSQHFHLGGLLTRTN*DFLDFP
Trigger: TGGAAAATCCAGAAAATCTCAATTGGTTCGAGTGAG...GAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp TATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: YNCPSKISCQRKSQHFHLMHRSS*RQVLQT
Trigger: TGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCAT...AAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR GCA 90 bp AATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGCCTTCTCTTATAATTaGCCGAGCAAGATTTCGTGC +
Preference number: 4 (lower is better)
Translates to: NCPSKISCQRKSQHFHLGAFSYN*PSKISC
Trigger: GCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGC...ACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CCA 90 bp GAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCTCTATGTCATCATCCTaGAGCTGCTCGGTATCAGAT +
Preference number: 4 (lower is better)
Translates to: EPSLIIARARFRARESLSSMSSS*SCSVSD
Trigger: ATCTGATACCGAGCAGCTCCAGGATGATGACATAGA...GCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CCA 90 bp AGCATTTCCACCTTGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCATCAGCATTTCCACCTTaGTGGTCTCTATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: SISTLVVSMSSSWSCSVSSAFPP*WSLCHH
Trigger: ATGATGACATAGAGACCACCAAGGTGGAAATGCTGA...TGATACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CCA 90 bp AGTTCTCAGGAACCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTACCAAAGGGCCATACTaGAGCTGCTCGGTATCAGAT +
Preference number: 4 (lower is better)
Translates to: SSQEPSSEPSLIIARARFTKGPY*SCSVSD
Trigger: ATCTGATACCGAGCAGCTCCAGTATGGCCCTTTGGT...AAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS-3UTR CCA 90 bp AGCAGTTCTCAGGAACCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGAACCAAGATGGTCACCTaGGGCCACTTCAATAAAAAG +
Preference number: 4 (lower is better)
Translates to: SSSQEPSSEPSLIIARARTKMVT*GHFNKK
Trigger: CTTTTTATTGAAGTGGCCCCAGGTGACCATCTTGGT...TCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGAGAACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581104.5
3UTR CAA 72 bp CCAGTTGCTCAGGGCGATGCTGCACTCTTTGATTACTaGATGGATGTCAAACTCAAAGGCTGCCAACAAGAT +
Preference number: 4 (lower is better)
Translates to: PVAQGDAALFDY*MDVKLKGCQQD
Trigger: ATCTTGTTGGCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGCATCGCCCTGAGCAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR TCA 90 bp AACCCAGGCGATTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCCGAGTCACTAGGAAATaGTACCAATTACTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: NPGDCCGRLSWLRSYKCCRVTRK*YQLLRS
Trigger: ACTTCTGAGTAATTGGTATCATTTCCTAGTGACTCG...GCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR TCA 90 bp ATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGTCAGGAACCTTCCAGTaGGCCTTCTCTTATAATTGC +
Preference number: 4 (lower is better)
Translates to: IIARARFRARESLSISTLSGTFQ*AFSYNC
Trigger: GCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGA...CAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp TATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTAGCTCTAGCAGGGACTaGCAAGCAAAGAAAACCACT +
Preference number: 4 (lower is better)
Translates to: YNCPSKISCQRKSQHFHLSSSRD*QAKKTT
Trigger: AGTGGTTTTCTTTGCTTGTCAGTCCCTGCTAGAGCT...AAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp CGCAATAGTGTGCTTTGTATACGAATACCTCATTTCAAATCAAGCAGTGTTTGTTCAGTCATCTGCCGCTaGTCACAGATCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RNSVLCIRIPHFKSSSVCSVICR*SQIRST
Trigger: GGTGCTGCGGATCTGTGAGCAGCGGCAGATGACTGA...ACAAACACTGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp AGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCAGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: RFRARESLSISTLVVSMSVSDSP*TGLLDV
Trigger: GACGTCAAGAAGACCTGTGCATGGAGAATCTGATAC...TGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR GCA 90 bp AGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: SEPSLIIARARFRARESLVSDSP*TGLLDV
Trigger: GACGTCAAGAAGACCTGTGCATGGAGAATCTGATAC...GAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR GCA 90 bp AGTTCTCAGGAACCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTTCATCATCCTGGAGCTaGTCGGTATCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSQEPSSEPSLIIARARFSSSWS*SVSDSP
Trigger: TGGAGAATCTGATACCGAGCAGCTCCAGGATGATGA...AAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR GCA 90 bp AGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCAGCCTTCTCTTATAATTaGCCGAGCAAGATTTCGTGC +
Preference number: 4 (lower is better)
Translates to: RFRARESLSISTLVVSMSAFSYN*PSKISC
Trigger: GCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGC...TGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR GCA 90 bp CCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAACCCTTCGCAATAGTGTaGTTTGTATACGAATACCTC +
Preference number: 4 (lower is better)
Translates to: PSSEPSLIIARARFRAREPFAIV*FVYEYL
Trigger: GAGGTATTCGTATACAAAGCACACTATTGCGAAGGG...TTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCGGAACTCTCTCATGTTaGAACCGAAATAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: EPSLIIARARFRARESLSGTLSC*NRNRGC
Trigger: ACAACCTCTATTTCGGTTCCAACATGAGAGAGTTCC...GCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CCA 90 bp GAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCTCAGCATTTCCACCTTaGTGGTCTCTATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: EPSLIIARARFRARESLSSAFPP*WSLCHH
Trigger: ATGATGACATAGAGACCACCAAGGTGGAAATGCTGA...GCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CCA 90 bp CGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCATCATCATCAGCATTTCCACCTTaGTGGTCTCTATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: RARESLSISTLVVSMSSSSAFPP*WSLCHH
Trigger: ATGATGACATAGAGACCACCAAGGTGGAAATGCTGA...TGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS-3UTR CCA 90 bp AATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGCATTTCCACCTTGGTaGTCTCTATGTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: NCPSKISCQRKSQHFHLGAFPPW*SLCHHH
Trigger: ATGATGATGACATAGAGACCACCAAGGTGGAAATGC...ACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS-3UTR TCA 90 bp AGTTCTCAGGAACCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTTCAGGAACCTTCCAGTaGGCCTTCTCTTATAATTGC +
Preference number: 4 (lower is better)
Translates to: SSQEPSSEPSLIIARARFSGTFQ*AFSYNC
Trigger: GCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGA...AAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp CTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCACAAAGATACCACATTaGAGCAGTTCTCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: LIIARARFRARESLSISTTKIPH*SSSQEP
Trigger: AGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGT...GGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR TCA 90 bp TCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTACAAAGATACCACATTaGAGCAGTTCTCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: SSEPSLIIARARFRARESTKIPH*SSSQEP
Trigger: AGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGT...ACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR GCA 90 bp ATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGATCTTTAGCAGCAATTaGAACCTGGTGCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: IIARARFRARESLSISTLIFSSN*NLVHFL
Trigger: GAGGAAATGCACCAGGTTGCAATTGCTGCTAAAGAT...CAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp TTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGAACTTGTTCAGTCAAACTCAAAGGCTaGCAACAAGATGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLRTAFMAKILQMLRTCSVKLKG*QQDVVQ
Trigger: CTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGAC...TGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp CTATATACATTGCCATACAAAGATACCACATTGAAGCAGTTCTCAGGAACCTTCGGGCCATACTGGAGCTaGTCGGTATCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LYTLPYKDTTLKQFSGTFGPYWS*SVSDSP
Trigger: TGGAGAATCTGATACCGAGCAGCTCCAGTATGGCCC...GAAGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTATGGCAATGTATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS-3UTR CCA 90 bp CGCAATAGTGTGCTTTGTATACGAATACCTCATTTCAAATCAAGCAGTGTTTGTAGCAGGTCTGTCAGGTaGGCCACAAACCACCAGTTG +
Preference number: 4 (lower is better)
Translates to: RNSVLCIRIPHFKSSSVCSRSVR*ATNHQL
Trigger: CAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCT...ACAAACACTGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp TCTCAGGAACCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTATAAGTCTGTTCTGCTaGGAAAATCACCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SQEPSSEPSLIIARARFRISLFC*ENHLFL
Trigger: CAGAAACAGGTGATTTTCTCAGCAGAACAGACTTAT...ACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS-3UTR GCA 90 bp AATCTATATACATTGCCATACAAAGATACCACATTGAAGCAGTTCTCAGGAACCCAGAAGGAGAGAAGCTaGGTCGGCAAAACGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NLYTLPYKDTTLKQFSGTQKERS*VGKTLL
Trigger: GAGAAGCGTTTTGCCGACGCAGCTTCTCTCCTTCTG...GGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTATGGCAATGTATATAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578987.1
ENST00000579900.5
CDS-3UTR CCA 90 bp CTATATACATTGCCATACAAAGATACCACATTGAAGCAGTTCTCAGGAACCTTCTCTATGTCATCATCCTaGAGCTGCTCGGTATCAGAT +
Preference number: 4 (lower is better)
Translates to: LYTLPYKDTTLKQFSGTFSMSSS*SCSVSD
Trigger: ATCTGATACCGAGCAGCTCCAGGATGATGACATAGA...GAAGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTATGGCAATGTATATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578987.1
ENST00000584155.1
CDS-3UTR GCA 90 bp CGCAATAGTGTGCTTTGTATACGAATACCTCATTTCAAATCAAGCAGTGTTTGTGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: RNSVLCIRIPHFKSSSVCVSDSP*TGLLDV
Trigger: GACGTCAAGAAGACCTGTGCATGGAGAATCTGATAC...ACAAACACTGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR GCA 90 bp AATCTATATACATTGCCATACAAAGATACCACATTGAAGCAGTTCTCAGGAACCGCCTTCTCTTATAATTaGCCGAGCAAGATTTCGTGC +
Preference number: 4 (lower is better)
Translates to: NLYTLPYKDTTLKQFSGTAFSYN*PSKISC
Trigger: GCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGC...GGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTATGGCAATGTATATAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000584155.1
CDS-3UTR CCA 90 bp CGCAATAGTGTGCTTTGTATACGAATACCTCATTTCAAATCAAGCAGTGTTTGTTCTATGTCATCATCCTaGAGCTGCTCGGTATCAGAT +
Preference number: 4 (lower is better)
Translates to: RNSVLCIRIPHFKSSSVCSMSSS*SCSVSD
Trigger: ATCTGATACCGAGCAGCTCCAGGATGATGACATAGA...ACAAACACTGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR TCA 90 bp CTTCGCAATAGTGTGCTTTGTATACGAATACCTCATTTCAAATCAAGCAGTGTTCGAGTCACTAGGAAATaGTACCAATTACTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LRNSVLCIRIPHFKSSSVRVTRK*YQLLRS
Trigger: ACTTCTGAGTAATTGGTATCATTTCCTAGTGACTCG...AACACTGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CAA 90 bp GGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCTGGGGAAGAGAGCCTGCCTaGCTTGGCTGCCCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GPARGSNQSNRPPAATGWGREPA*LGCPQP
Trigger: GGGCTGGGGGCAGCCAAGCAAGGCAGGCTCTCTTCC...CCAGCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CAA 90 bp GCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCTTTCCTGGCATCGGCTTCCTaGGAGAGCATCTGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: ARMLQERAEPRRLLRTAFLASAS*ESICRA
Trigger: GGCCCGACAGATGCTCTCCAAGGAAGCCGATGCCAG...GAAAGCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS GCA 90 bp CCCAGACCTTCAAGAGAGACTCCAGGTGAGGGCTGGTGGCGAATGTaGTGTCCTGGAGGTACCGCTCACATTCCTCGTGCCAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: PRPSRETPGEGWWRM*CPGGTAHIPRASAA
Trigger: GGCAGCACTGGCACGAGGAATGTGAGCGGTACCTCCAGGACAGCACATTCGCCACCAGCCCTCACCTGGAGTCTCTCTTGAAGGTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS GCA 90 bp CACGGCAGAGCGACAGACAGCCCTATCCAAGGAGGACCAAGCTCCTaGCACTGCTGCACTGGATGCCACAGCCCCCATAGGAAGCCAACA +
Preference number: 5 (lower is better)
Translates to: HGRATDSPIQGGPSS*HCCTGCHSPHRKPT
Trigger: TGTTGGCTTCCTATGGGGGCTGTGGCATCCAGTGCAGCAGTGGCAGGAGCTTGGTCCTCCTTGGATAGGGCTGTCTGTCGCTCTGCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS-3UTR CAA 90 bp CTGCCACAGGCTGGGATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAAGCCACAAACCACCAGTaGCTCAGGGCGATGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LPQAGMSKQSRGVLQQEEATNHQ*LRAMLH
Trigger: GTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGC...TTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATCCCAGCCTGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR CAA 90 bp GTGACCTCAGGATCCCCTGACTCCTGCGTCCCACAGACAGTAGGCTGGGAGCAGAAATGCTGCGAACTCTaGGCGTCCACAGCCCCACGT +
Preference number: 5 (lower is better)
Translates to: VTSGSPDSCVPQTVGWEQKCCEL*ASTAPR
Trigger: ACGTGGGGCTGTGGACGCCAAGAGTTCGCAGCATTT...CTGCTCCCAGCCTACTGTCTGTGGGACGCAGGAGTCAGGGGATCCTGAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CAA 90 bp TCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGTGCAGCTCCAGGGCCTGGCCTGCATTGGTaGGGGCAGGGGCCCATGTTC +
Preference number: 5 (lower is better)
Translates to: SGLSARCSEVSAQCAAPGPGLHW*GQGPMF
Trigger: GAACATGGGCCCCTGCCCCAACCAATGCAGGCCAGG...CCCTGGAGCTGCACATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS GCA 90 bp AATGTGCTGTCCTGGAGGTACCGCTCACATTCCTCGTGCCAGTGCTaGCACTTCAGCTCCAGCTCTGTCAGTGTCTGGGTGTTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: NVLSWRYRSHSSCQC*HFSSSSVSVWVFPG
Trigger: GCCCGGGAACACCCAGACACTGACAGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCGGTACCTCCAGGACAGCACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579298.5
CDS CCA 90 bp TCACTGCCCAGAACATCTGCCGACAAACTGTCCACCTCGCACACATaGAGCCGGACCCAGTCAAGGAGATGGAGGAGGAGAGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SLPRTSADKLSTSHT*SRTQSRRWRRRGPA
Trigger: AGCTGGCCCTCTCCTCCTCCATCTCCTTGACTGGGTCCGGCTCCATGTGTGCGAGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000578830.5
ENST00000579298.5
ENST00000579324.5
ENST00000583948.5
CDS-3UTR CAA 90 bp GTCATCTGCCGCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGGCAGAACCCAGGCGATaGTTGCGGACGGCTTTCATG +
Preference number: 5 (lower is better)
Translates to: VICRCSQIRSTFRAFCSVAEPRR*LRTAFM
Trigger: CATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGC...CACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGCGGCAGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CAA 90 bp TCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCGAGAGCCTGCCTTGCTaGGCTGCCCCCAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: SDSPCTGLLDVKSSRHRIESLPC*AAPSPG
Trigger: GCCAGGGCTGGGGGCAGCCAAGCAAGGCAGGCTCTC...GATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS GCA 90 bp GCGACAGACAGCCCTATCCAAGGAGGACCAAGCTCCTGCCACTGCTaGACTGGATGCCACAGCCCCCATAGGAAGCCAACATGGATGCAA +
Preference number: 5 (lower is better)
Translates to: ATDSPIQGGPSSCHC*TGCHSPHRKPTWMQ
Trigger: TTGCATCCATGTTGGCTTCCTATGGGGGCTGTGGCATCCAGTGCAGCAGTGGCAGGAGCTTGGTCCTCCTTGGATAGGGCTGTCTGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS GCA 90 bp AGAGCGACAGACAGCCCTATCCAAGGAGGACCAAGCTCCTGCCACTaGTGCACTGGATGCCACAGCCCCCATAGGAAGCCAACATGGATG +
Preference number: 5 (lower is better)
Translates to: RATDSPIQGGPSSCH*CTGCHSPHRKPTWM
Trigger: CATCCATGTTGGCTTCCTATGGGGGCTGTGGCATCCAGTGCAGCAGTGGCAGGAGCTTGGTCCTCCTTGGATAGGGCTGTCTGTCGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS-3UTR CAA 90 bp GCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGGAACCCAGGCGATTGTaGCGGACGGCTTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: AASLARMLQERAEPRRLLEPRRL*RTAFMA
Trigger: AGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTC...CAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CAA 90 bp GGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGCAGAACCCAGGCGATaGTTGCGGACGGCTTTCATG +
Preference number: 5 (lower is better)
Translates to: GILSTDAPREGRTQAIVAAEPRR*LRTAFM
Trigger: CATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGC...CGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CAA 90 bp CGGTATCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCCAGCCCTGGCCTGCATaGGTTGGGGCAGGGGCCCAT +
Preference number: 5 (lower is better)
Translates to: RYQILHAQVFLTSSPPDTQPWPA*VGAGAH
Trigger: ATGGGCCCCTGCCCCAACCAATGCAGGCCAGGGCTG...GGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS TCA 90 bp AAAGGAAAGGGTCTTCCTGTTCCTCAGGGAGGAATTCAAAGAGAATaGCCCATCAGGGCGCCCCCAGGACTCCTACCCCCACCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: KGKGLPVPQGGIQRE*PIRAPPGLLPPPLP
Trigger: GGGCAAGGGTGGGGGTAGGAGTCCTGGGGGCGCCCTGATGGGTCATTCTCTTTGAATTCCTCCCTGAGGAACAGGAAGACCCTTTCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577561.1
CDS CCA 90 bp GAAACAGGTCCAGGCTGGACTTCAAGAGAGACTCCAGGTGAGGGCTaGTGGCGAATGTGCTGTCCTGGAGGTACCGCTCACATTCCTCGT +
Preference number: 5 (lower is better)
Translates to: ETGPGWTSRETPGEG*WRMCCPGGTAHIPR
Trigger: ACGAGGAATGTGAGCGGTACCTCCAGGACAGCACATTCGCCACCAGCCCTCACCTGGAGTCTCTCTTGAAGTCCAGCCTGGACCTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583070.5
CDS-3UTR CAA 90 bp TTGCAGTGGTCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGCTGAACTGGCGGCCATaGGCTGGATCTTTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LQWSSRSVRWATNHQLLRLNWRP*AGSLAA
Trigger: TGCTGCTAAAGATCCAGCCAATGGCCGCCAGTTCAG...CCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGACCACTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CAA 90 bp GGCAAAGGCGGCATCCTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGGGTTTTACTGTGGGATaGGAGTACAAGAGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: GKGGILSTDAPREGRTQAGFTVG*EYKSRV
Trigger: GACTCGGCTCTTGTACTCCAATCCCACAGTAAAACC...CGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR CAA 90 bp CTCGGCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCACAAATGCTGCGAACTaGTTCAGTCATCTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LGPARGSNQSNRPPAATGTNAAN*FSHLPL
Trigger: CAGCGGCAGATGACTGAACAAGTTCGCAGCATTTGT...GCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS GCA 90 bp GAAGCTGTAAGCCAGGAGGGAAGAAGGGACCCTGTGGAGGACTCCTaGCATCTCCTTTCAGCTAAGGGGTTAGCAGTCAAGCATGCCCAC +
Preference number: 5 (lower is better)
Translates to: EAVSQEGRRDPVEDS*HLLSAKGLAVKHAH
Trigger: GTGGGCATGCTTGACTGCTAACCCCTTAGCTGAAAGGAGATGGCAGGAGTCCTCCACAGGGTCCCTTCTTCCCTCCTGGCTTACAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS GCA 90 bp GATGCCACAGCCCCCATAGGAAGCCAACATGGATGCAATCTGAACTaGTTCCCAGACCTTCAAGAGAGACTCCAGGTGAGGGCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: DATAPIGSQHGCNLN*FPDLQERLQVRAGG
Trigger: GCCACCAGCCCTCACCTGGAGTCTCTCTTGAAGGTCTGGGAAGCAGTTCAGATTGCATCCATGTTGGCTTCCTATGGGGGCTGTGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS GCA 90 bp AGCCCTATCCAAGGAGGACCAAGCTCCTGCCACTGCTGCACTGGATaGCACAGCCCCCATAGGAAGCCAACATGGATGCAATCTGAACTG +
Preference number: 5 (lower is better)
Translates to: SPIQGGPSSCHCCTG*HSPHRKPTWMQSEL
Trigger: CAGTTCAGATTGCATCCATGTTGGCTTCCTATGGGGGCTGTGGCATCCAGTGCAGCAGTGGCAGGAGCTTGGTCCTCCTTGGATAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS GCA 90 bp GACTCGGGGCAGGCAGGGCTGCTGTATAACGAACCCCAGAGAAGGTaGCTTGTTCTTTCACTAAGGGCCAAAGGAAAGGGTCTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: DSGQAGLLYNEPQRR*LVLSLRAKGKGLPG
Trigger: CCCAGGAAGACCCTTTCCTTTGGCCCTTAGTGAAAGAACAAGGCACCTTCTCTGGGGTTCGTTATACAGCAGCCCTGCCTGCCCCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583948.5
CDS GCA 90 bp GGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGATGCTaGAGATTCAGACACCAAGGCAAGAAGGAAAATCAGGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: GLSGGPQTTSCSGRC*RFRHQGKKENQGTG
Trigger: GCCTGTGCCCTGATTTTCCTTCTTGCCTTGGTGTCTGAATCTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582681.1
CDS GCA 90 bp CATCTTGCCCAACTCCCAGTGAAGTGCACCCCAGCTGTTTCCTCTTaGCAGACAGCAAGGAACTGGCCCGTCTTCAGAGGAAGAGAGCTC +
Preference number: 5 (lower is better)
Translates to: HLAQLPVKCTPAVSS*QTARNWPVFRGREL
Trigger: GAGCTCTCTTCCTCTGAAGACGGGCCAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581335.1
CDS GCA 90 bp CATCTTGCCCAACTCCCAGTGAAGTGCACCCCAGCTGTTTCCTCTTaGCAGACAGCAAGGAACTGGCCCGTCTTCAGAGGAAGCTGCACT +
Preference number: 5 (lower is better)
Translates to: HLAQLPVKCTPAVSS*QTARNWPVFRGSCT
Trigger: AGTGCAGCTTCCTCTGAAGACGGGCCAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS CCA 90 bp GTGAAGTGCACCCCAGCTGTTTCCTCTTGCCAGACAGCAAGGAACTaGCCCGTCTTCAGAGGAAGCTGTAAGCCAGGAGGGAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: VKCTPAVSSCQTARN*PVFRGSCKPGGKKG
Trigger: TCCCTTCTTCCCTCCTGGCTTACAGCTTCCTCTGAAGACGGGCCAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS CCA 90 bp TCTGAACTGCTTCCCAGACCTTCAAGAGAGACTCCAGGTGAGGGCTaGTGGCGAATGTGCTGTCCTGGAGGTACCGCTCACATTCCTCGT +
Preference number: 5 (lower is better)
Translates to: SELLPRPSRETPGEG*WRMCCPGGTAHIPR
Trigger: ACGAGGAATGTGAGCGGTACCTCCAGGACAGCACATTCGCCACCAGCCCTCACCTGGAGTCTCTCTTGAAGGTCTGGGAAGCAGTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS-3UTR CAA 90 bp GCTGGCCCCAGGTTGTCAATGAGATCCAAATCAGAAAAGCAGCCTCGCTCACAGGCCACAAACCACCAGTaGCTCAGGGCGATGCTGCAC +
Preference number: 5 (lower is better)
Translates to: AGPRLSMRSKSEKQPRSQATNHQ*LRAMLH
Trigger: GTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGC...CTGTGAGCGAGGCTGCTTTTCTGATTTGGATCTCATTGACAACCTGGGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CAA 90 bp GATGAGCAAACAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCTCATGTTGGGAACCCAGGCGATTGTaGCGGACGGCTTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: DEQTVPRRTPAGGTLSCWEPRRL*RTAFMA
Trigger: AGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTC...CCAACATGAGAGAGTTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CAA 90 bp GCCCAGCTCGGGGCAGTAATCAAAGTAATCGACCCCCAGCTGCCACAGGCTGGGATACTTTTGGAGGACTaGAAGGGCACCAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: AQLGAVIKVIDPQLPQAGILLED*KGTRKL
Trigger: CAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTAT...CCCAGCCTGTGGCAGCTGGGGGTCGATTACTTTGATTACTGCCCCGAGCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS GCA 90 bp CCAGAAGCTGTCATGTTTGCTTGGATTCTCACTGCCCAGAACATCTaGCGACAAACTGTCCACCTCGCACACATGGAGCCGGACCCAGTC +
Preference number: 5 (lower is better)
Translates to: PEAVMFAWILTAQNI*RQTVHLAHMEPDPV
Trigger: GACTGGGTCCGGCTCCATGTGTGCGAGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000578830.5
ENST00000579298.5
ENST00000579324.5
ENST00000583877.5
ENST00000583948.5
CDS GCA 90 bp CATCTTGCCCAACTCCCAGTGAAGTGCACCCCAGCTGTTTCCTCTTaGCAGACAGCAAGGAACTGGCCCGTCTTCAGAGGAAGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: HLAQLPVKCTPAVSS*QTARNWPVFRGSCK
Trigger: CTTACAGCTTCCTCTGAAGACGGGCCAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS GCA 90 bp GCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGATaGTGCAGATTCAGACACCAAGGCAAGAAGGAAAATCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: AGLSGGPQTTSCSGR*CRFRHQGKKENQGT
Trigger: TGTGCCCTGATTTTCCTTCTTGCCTTGGTGTCTGAATCTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582681.1
CDS GCA 90 bp GTCGGGCCTCATCCAGCCGGCCCAAGTTCCAGAAGCTGTCATGTTTaGTTGGATTCTCACTGCCCAGAACATCTGCCGACAAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: VGPHPAGPSSRSCHV*LDSHCPEHLPTNCP
Trigger: TGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGGCCGGCTGGATGAGGCCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583877.5
CDS CCA 90 bp GGCCTCATCCAGCCGGCCCAAGTTCCAGAAGCTGTCATGTTTGCTTaGATTCTCACTGCCCAGAACATCTGCCGACAAACTGTCCACCTC +
Preference number: 5 (lower is better)
Translates to: GLIQPAQVPEAVMFA*ILTAQNICRQTVHL
Trigger: GAGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGGCCGGCTGGATGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583877.5
CDS-3UTR CAA 90 bp CTTAGCACGGATGCTCCAAGAGAGGGCAGAACCCAGGCGATTGTTGCGGACGGCAGCTGTCATGTTTGCTaGGATTCTCACTGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LSTDAPREGRTQAIVADGSCHVC*DSHCPE
Trigger: TTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCT...GCCGTCCGCAACAATCGCCTGGGTTCTGCCCTCTCTTGGAGCATCCGTGCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CAA 90 bp CCGAGGCGTACTCCAGCAGGAGGAACTCTCTCATGTTGGAACCGAAATAGAGGTGCTGCCAACAAGATGTaGTCCAGGGGTTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PRRTPAGGTLSCWNRNRGAANKM*SRGSGL
Trigger: CAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGC...ACCTCTATTTCGGTTCCAACATGAGAGAGTTCCTCCTGCTGGAGTACGCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578830.5
ENST00000581104.5
CDS-3UTR CAA 90 bp CAGTCCCGAGGCGTACTCCAGCAGGAGGAACTCTCTCATGTTGGAACCGAAATAGAACCCAGGCGATTGTaGCGGACGGCTTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: QSRGVLQQEELSHVGTEIEPRRL*RTAFMA
Trigger: AGCCATGAAAGCCGTCCGCAACAATCGCCTGGGTTC...TATTTCGGTTCCAACATGAGAGAGTTCCTCCTGCTGGAGTACGCCTCGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578830.5
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CAA 90 bp GAGCTTGCAGTGGTCCAGCAGGTCTGTCAGGTGGGCCACAAACCACCAGTTGCTATGGCTGGCCCCAGGTaGTCAATGAGATCCAAATCA +
Preference number: 5 (lower is better)
Translates to: ELAVVQQVCQVGHKPPVAMAGPR*SMRSKS
Trigger: TGATTTGGATCTCATTGACAACCTGGGGCCAGCCAT...AGCAACTGGTGGTTTGTGGCCCACCTGACAGACCTGCTGGACCACTGCAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS TCA 90 bp GAAGAGAGCTCAGATCCCTTCCTGCTTGTGAGAGTGGAGAGAGGCTaGGACTGGGGGACTGCAAGCCTAATCATTCCTTGTCTGTGTCCG +
Preference number: 5 (lower is better)
Translates to: EESSDPFLLVRVERG*DWGTASLIIPCLCP
Trigger: CGGACACAGACAAGGAATGATTAGGCTTGCAGTCCCCCAGTCTCAGCCTCTCTCCACTCTCACAAGCAGGAAGGGATCTGAGCTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581335.1
CDS GCA 90 bp CAAACTCAAAGGCTGCCAACAAGATGTTGTCCAGGGGTTCTGGGCTaGTCTCACCTCCCAGAAACAGGTCCAGGCTGGACTTCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: QTQRLPTRCCPGVLG*SHLPETGPGWTSRE
Trigger: CTCTCTTGAAGTCCAGCCTGGACCTGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583070.5
CDS CCA 90 bp TGCCACTGCTGCACTGGATGCCACAGCCCCCATAGGAAGCCAACATaGATGCAATCTGAACTGCTTCCCAGACCTTCAAGAGAGACTCCA +
Preference number: 5 (lower is better)
Translates to: CHCCTGCHSPHRKPT*MQSELLPRPSRETP
Trigger: TGGAGTCTCTCTTGAAGGTCTGGGAAGCAGTTCAGATTGCATCCATGTTGGCTTCCTATGGGGGCTGTGGCATCCAGTGCAGCAGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS CCA 90 bp GATGTCAAACTCAAAGGCTGCCAACAAGATGTTGTCCAGGGGTTCTaGGCTGCTCTCACCTCCCAGAAACAGGTCCAGGCTGGGCATAGT +
Preference number: 5 (lower is better)
Translates to: DVKLKGCQQDVVQGF*AALTSQKQVQAGHS
Trigger: ACTATGCCCAGCCTGGACCTGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS TCA 90 bp ATAATGCTCCTGCTCTCAGCTAAGGGCACCGGATTTCAACTAGTCTaGAAGCTCTCGCCATCACGGCAGAGCGACAGACAGCCCTATCCA +
Preference number: 5 (lower is better)
Translates to: IMLLLSAKGTGFQLV*KLSPSRQSDRQPYP
Trigger: TGGATAGGGCTGTCTGTCGCTCTGCCGTGATGGCGAGAGCTTTCAGACTAGTTGAAATCCGGTGCCCTTAGCTGAGAGCAGGAGCATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS GCA 90 bp GGCTCAAGTCCAGAAAGAGACACACTTCCCTGCCGCCCAGAACTGTaGATGGGTCTGACTGATACATCCCATGAGAAAACAAGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: GSSPERDTLPCRPEL*MGLTDTSHEKTSAH
Trigger: GTGGGCACTTGTTTTCTCATGGGATGTATCAGTCAGACCCATGCACAGTTCTGGGCGGCAGGGAAGTGTGTCTCTTTCTGGACTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS CCA 90 bp GATGTCAAACTCAAAGGCTGCCAACAAGATGTTGTCCAGGGGTTCTaGGCTGCTCTCACCTCCCAGAAACAGGTCCAGGCTGGACTTCAA +
Preference number: 5 (lower is better)
Translates to: DVKLKGCQQDVVQGF*AALTSQKQVQAGLQ
Trigger: TTGAAGTCCAGCCTGGACCTGTTTCTGGGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583070.5
CDS-3UTR CAA 90 bp ATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTATCCGCTCAATGACAAATGCTGCGAACTaGTTCAGTCATCTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: IRSTFRAFCSVFRGIRSMTNAAN*FSHLPL
Trigger: CAGCGGCAGATGACTGAACAAGTTCGCAGCATTTGT...CATTGAGCGGATACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CAA 90 bp GCTGCTCACAGATCCGCAGCACCTTCAGGGCTTTCTGCTCGGTGTTCAGAGGTACTCAGCATTTCCACCTaGGTGGTCTCTATGTCATCA +
Preference number: 5 (lower is better)
Translates to: AAHRSAAPSGLSARCSEVLSIST*VVSMSS
Trigger: TGATGACATAGAGACCACCAAGGTGGAAATGCTGAG...TACCTCTGAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS TCA 90 bp CAGAAAGAGACACACTTCCCTGCCGCCCAGAACTGTGCATGGGTCTaGCTGATACATCCCATGAGAAAACAAGTGCCCACAAGACCCCAA +
Preference number: 5 (lower is better)
Translates to: QKETHFPAAQNCAWV*LIHPMRKQVPTRPQ
Trigger: TTGGGGTCTTGTGGGCACTTGTTTTCTCATGGGATGTATCAGTCAGACCCATGCACAGTTCTGGGCGGCAGGGAAGTGTGTCTCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS CCA 90 bp GATAGAGGGCTGGAAATTCTGAATAATACCCAGCCTGAAGCCCAGTaGTTCGGTAGCTCACGTCACTGGAGTGAGACTCTTGGAACACGC +
Preference number: 5 (lower is better)
Translates to: DRGLEILNNTQPEAQ*FGSSRHWSETLGTR
Trigger: GCGTGTTCCAAGAGTCTCACTCCAGTGACGTGAGCTACCGAACCACTGGGCTTCAGGCTGGGTATTATTCAGAATTTCCAGCCCTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449421.6
CDS-3UTR CAA 90 bp TCTCAGCATTTCCACCTTGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTCATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: SQHFHLGGLYVIILELLGHAQVF*TSSPPD
Trigger: GTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATG...ACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CAA 90 bp TCGATACTTTTGGAGGACTTGAAGGGCACCAGGAAACTGCCGACATCTTGCCCAGCCACAAACCACCAGTaGCTCAGGGCGATGCTTTTA +
Preference number: 5 (lower is better)
Translates to: SILLEDLKGTRKLPTSCPATNHQ*LRAMLL
Trigger: TAAAAGCATCGCCCTGAGCAACTGGTGGTTTGTGGC...TGGGCAAGATGTCGGCAGTTTCCTGGTGCCCTTCAAGTCCTCCAAAAGTATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS GCA 90 bp CCTGCAGCACCAAGATGGTCACCAAGTTCCAGAAGCTGTCATGTTTaGTTGGATTCTCACTGCCCAGAACATCTGCCGACAAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: PAAPRWSPSSRSCHV*LDSHCPEHLPTNCP
Trigger: TGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGTGACCATCTTGGTGCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000579324.5
ENST00000583948.5
CDS GCA 90 bp AATACCAAAGGGCCATACTGGAGCTGCTCGGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCAAC +
Preference number: 5 (lower is better)
Translates to: NTKGPYWSCSVSDSP*TGLLDVKSSRHRIN
Trigger: GTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGTATGGCCCTTTGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS CCA 90 bp CAGCACCAAGATGGTCACCAAGTTCCAGAAGCTGTCATGTTTGCTTaGATTCTCACTGCCCAGAACATCTGCCGACAAACTGTCCACCTC +
Preference number: 5 (lower is better)
Translates to: QHQDGHQVPEAVMFA*ILTAQNICRQTVHL
Trigger: GAGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGTGACCATCTTGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000579324.5
ENST00000583948.5
CDS CCA 90 bp AATAATACCCAGCCTGAAGCCCAGTGGTTCGGTAGCTCACGTCACTaGAGTGAGACTCTTGGAACACGCCATCCCATAAGGTGTCCATTA +
Preference number: 5 (lower is better)
Translates to: NNTQPEAQWFGSSRH*SETLGTRHPIRCPL
Trigger: TAATGGACACCTTATGGGATGGCGTGTTCCAAGAGTCTCACTCCAGTGACGTGAGCTACCGAACCACTGGGCTTCAGGCTGGGTATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449421.6
CDS TCA 90 bp AGTTCCTTCTGCTCTAACAAGGCAGCTTCGTCTCCCAGCATAATCTaGGGAGAGACATTTGTGCTGAACTCTGTCCTCCTCTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: SSFCSNKAASSPSII*GETFVLNSVLLSGV
Trigger: TACCCCTGAGAGGAGGACAGAGTTCAGCACAAATGTCTCTCCTCAGATTATGCTGGGAGACGAAGCTGCCTTGTTAGAGCAGAAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS GCA 90 bp ATCCCTGCACTCTTTGATTACTTGATGGATGTCAAACTCAAAGGCTaGCAACAAGATGTTGTCCAGGGGTTCTGGGCTGCTCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: IPALFDYLMDVKLKG*QQDVVQGFWAALTS
Trigger: GGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449421.6
CDS-3UTR CAA 90 bp AACCTGTCTGACACGAGCGTGGCAAAGGCGGCATCCTTAGCACGGATGCTCCAAACTCACTCGAACCAATaGAGATTTTCTGGATTTTCC +
Preference number: 5 (lower is better)
Translates to: NLSDTSVAKAASLARMLQTHSNQ*RFSGFS
Trigger: GGAAAATCCAGAAAATCTCAATTGGTTCGAGTGAGT...TTGGAGCATCCGTGCTAAGGATGCCGCCTTTGCCACGCTCGTGTCAGACAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CAA 90 bp TTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGAACTTGTTCAGCAGAACCCAGGCGATaGTTGCGGACGGCTTTCATG +
Preference number: 5 (lower is better)
Translates to: LLRTAFMAKILQMLRTCSAEPRR*LRTAFM
Trigger: CATGAAAGCCGTCCGCAACAATCGCCTGGGTTCTGC...TGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580879.5
ENST00000581104.5
CDS-3UTR CAA 90 bp GCATTTCCACCTTGGTGGTCTCTATGTCATCATCCTGGAGCTGCTCGGTATCAGCTCAGCATTTCCACCTaGGTGGTCTCTATGTCATCA +
Preference number: 5 (lower is better)
Translates to: AFPPWWSLCHHPGAARYQLSIST*VVSMSS
Trigger: TGATGACATAGAGACCACCAAGGTGGAAATGCTGAG...CTGATACCGAGCAGCTCCAGGATGATGACATAGAGACCACCAAGGTGGAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CAA 90 bp TACAAATGCTGCGAACTTGTTCAGTCATCTGCCGCTGCTCACAGATCCGCAGCATTTAGCTCGATACTTTaGGAGGACTTGAAGGGCACC +
Preference number: 5 (lower is better)
Translates to: YKCCELVQSSAAAHRSAAFSSIL*EDLKGT
Trigger: GGTGCCCTTCAAGTCCTCCAAAAGTATCGAGCTAAA...TGCTGCGGATCTGTGAGCAGCGGCAGATGACTGAACAAGTTCGCAGCATTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS TCA 90 bp ATACTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTTaGCGTCAAGTCCTCCAGACACCGCATCAACTCATAAGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: ILELLGIRFSMHRSS*RQVLQTPHQLISLF
Trigger: GAACAGACTTATGAGTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS GCA 90 bp GAAACTGCACTCTTTGATTACTTGATGGATGTCAAACTCAAAGGCTaGCAACAAGATGTTGTCCAGGGGTTCTGGGCTGCTCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: ETALFDYLMDVKLKG*QQDVVQGFWAALTS
Trigger: GGAGGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579557.5
CDS CCA 90 bp TTCGTCTCCCAGCATAATCAAGTTCCAGAAGCTGTCATGTTTGCTTaGATTCTCACTGCCCAGAACATCTGCCGACAAACTGTCCACCTC +
Preference number: 5 (lower is better)
Translates to: FVSQHNQVPEAVMFA*ILTAQNICRQTVHL
Trigger: GAGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGATTATGCTGGGAGACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS-3UTR CAA 90 bp TTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGGTGGTCTCTATGTCATCATCATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: FVPEKVSAFPPWWSLCHHHAQVF*TSSPPD
Trigger: GTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATG...ATGATGACATAGAGACCACCAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CAA 90 bp GCCATACAAAGATACCACATTGAAGCAGTTCTCAGGAACCTTCCAGTGAGCCTTCATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: AIQRYHIEAVLRNLPVSLHAQVF*TSSPPD
Trigger: GTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATG...AAGGCTCACTGGAAGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CAA 90 bp TTGTTGCGGACGGCTTTCATGGCTAAGATCTTACAAATGCTGCGAACTTGTTCACCCAGCTGTTTCCTCTaGCCAGACAGCAAGGAACTG +
Preference number: 5 (lower is better)
Translates to: LLRTAFMAKILQMLRTCSPSCFL*PDSKEL
Trigger: CAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGG...TGAACAAGTTCGCAGCATTTGTAAGATCTTAGCCATGAAAGCCGTCCGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS-3UTR CAA 90 bp GTTGCTCAGGGCGATGCTGCACTCTTTGATTACTTGATGGATGTCAAACTCAAACATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: VAQGDAALFDYLMDVKLKHAQVF*TSSPPD
Trigger: GTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATG...TTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGCATCGCCCTGAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CAA 90 bp TCAGATTCTCCATGCACAGGTCTTCTTGACGTCAAGTCCTCCAGACACCGCATCTACAAAGATACCACATaGAAGCAGTTCTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: SDSPCTGLLDVKSSRHRIYKDTT*KQFSGT
Trigger: GGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTA...GATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CAA 90 bp TCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTaGGTGGTCTCTATGTCATCA +
Preference number: 5 (lower is better)
Translates to: SSEPSLIIARARFRARESLSIST*VVSMSS
Trigger: TGATGACATAGAGACCACCAAGGTGGAAATGCTGAG...ACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CAA 90 bp ATAATTGCCCGAGCAAGATTTCGTGCCAGAGAAAGTCTCAGCATTTCCACCTTGCTCAGCATTTCCACCTaGGTGGTCTCTATGTCATCA +
Preference number: 5 (lower is better)
Translates to: IIARARFRARESLSISTLLSIST*VVSMSS
Trigger: TGATGACATAGAGACCACCAAGGTGGAAATGCTGAG...CAAGGTGGAAATGCTGAGACTTTCTCTGGCACGAAATCTTGCTCGGGCAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CAA 90 bp CTTCGCAATAGTGTGCTTTGTATACGAATACCTCATTTCAAATCAAGCAGTGTTGCTGCCAACAAGATGTaGTCCAGGGGTTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LRNSVLCIRIPHFKSSSVAANKM*SRGSGL
Trigger: CAGCCCAGAACCCCTGGACAACATCTTGTTGGCAGC...AACACTGCTTGATTTGAAATGAGGTATTCGTATACAAAGCACACTATTGCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS-3UTR CAA 90 bp AGCAGTTCTCAGGAACCTTCCAGTGAGCCTTCTCTTATAATTGCCCGAGCAAGATACAAAGATACCACATaGAAGCAGTTCTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: SSSQEPSSEPSLIIARARYKDTT*KQFSGT
Trigger: GGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTA...TCTTGCTCGGGCAATTATAAGAGAAGGCTCACTGGAAGGTTCCTGAGAACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000581104.5
ENST00000584155.1
CDS-3UTR CAA 90 bp TCTATGTCATCATCCTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTTACAAAGATACCACATaGAAGCAGTTCTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: SMSSSWSCSVSDSPCTGLYKDTT*KQFSGT
Trigger: GGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTA...AAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGGATGATGACATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000581104.5
ENST00000584155.1
CDS CCA 90 bp CGCCATCCCATAAGGTGTCCATTAGGTGCCAAGAAACAGGCTTGCTaGCTTTTTCTAGATTTTAAATGTCAAAGTAGTTTCCCGCGATGT +
Preference number: 5 (lower is better)
Translates to: RHPIRCPLGAKKQAC*LFLDFKCQSSFPRC
Trigger: ACATCGCGGGAAACTACTTTGACATTTAAAATCTAGAAAAAGCCAGCAAGCCTGTTTCTTGGCACCTAATGGACACCTTATGGGATGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449421.6
CDS CCA 90 bp TGGACCCCAGTCAAAATACATTTGGTTCTTCTTGGAATTCACGCCTaGAATCAATCTAACAGGCTGGTGTACAGTGGTGTAATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: WTPVKIHLVLLGIHA*NQSNRLVYSGVISA
Trigger: AGCTGAGATTACACCACTGTACACCAGCCTGTTAGATTGATTCCAGGCGTGAATTCCAAGAAGAACCAAATGTATTTTGACTGGGGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582833.5
CDS TCA 90 bp AGCAATTGCAACCTGGTGCATTTCCTCCATACATGCTCTGATGACTaGTCGGTAGTTTTTACTCACTCGAACCAATTGAGATTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SNCNLVHFLHTCSDD*SVVFTHSNQLRFSG
Trigger: TCCAGAAAATCTCAATTGGTTCGAGTGAGTAAAAACTACCGATCAGTCATCAGAGCATGTATGGAGGAAATGCACCAGGTTGCAATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000577208.5
ENST00000579298.5
ENST00000579324.5
ENST00000581104.5
ENST00000583548.1
ENST00000583569.5
ENST00000583948.5
CDS-3UTR CAA 90 bp TATACATTGCCATACAAAGATACCACATTGAAGCAGTTCTCAGGAACCTTCCAGTACAAAGATACCACATaGAAGCAGTTCTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: YTLPYKDTTLKQFSGTFQYKDTT*KQFSGT
Trigger: GGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTA...CTGGAAGGTTCCTGAGAACTGCTTCAATGTGGTATCTTTGTATGGCAATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578987.1
ENST00000579900.5
ENST00000584155.1
CDS CAA 72 bp CATATGCCTGCAGAGGCGGGGCTGGCATCGGCTTCCTaGGAGAGCATCTGTCGGGCCTCATCCAGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: HMPAEAGLASAS*ESICRASSSRP
Trigger: GGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000577561.1
ENST00000579324.5
ENST00000579557.5
ENST00000581104.5
ENST00000583877.5
ENST00000583948.5
CDS CCA 72 bp ATATGCCTGCAGAGGCGGGGCTGGCATCGGCTTCCTTaGAGAGCATCTGTCGGGCCTCATCCAGCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: ICLQRRGWHRLP*RASVGPHPAGP
Trigger: AGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000577561.1
ENST00000579324.5
ENST00000579557.5
ENST00000581104.5
ENST00000583948.5
CDS CCA 72 bp ATATGCCTGCAGAGGCGGGGCTGGCATCGGCTTCCTTaGAGAGCATCTGTCGGGCCTCATCCAGCCGGCCCA +
Preference number: 6 (lower is better)
Translates to: ICLQRRGWHRLP*RASVGPHPAGP
Trigger: TGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583877.5
CDS CAA 90 bp ATGATTCGGCATATGCCTGCAGAGGCGGGGCTGGCATCGGCTTCCTaGGAGAGCATCTGTCGGGCCTCATCCAGCCGGCCCTGCAGCACC +
Preference number: 6 (lower is better)
Translates to: MIRHMPAEAGLASAS*ESICRASSSRPCST
Trigger: GGTGCTGCAGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000577561.1
ENST00000579324.5
ENST00000579557.5
ENST00000581104.5
ENST00000583948.5
CDS CCA 72 bp GCAGCAGTCTCAGGCCCACCTCAACCACCCAGTCCCTaGGAAGCCAACACTAGCGGCACCCACCTGTCTGAC +
Preference number: 6 (lower is better)
Translates to: AAVSGPPQPPSP*EANTSGTHLSD
Trigger: GTCAGACAGGTGGGTGCCGCTAGTGTTGGCTTCCCAGGGACTGGGTGGTTGAGGTGGGCCTGAGACTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578294.1
CDS CAA 90 bp ATGATTCGGCATATGCCTGCAGAGGCGGGGCTGGCATCGGCTTCCTaGGAGAGCATCTGTCGGGCCTCATCCAGCCGGCCCAAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: MIRHMPAEAGLASAS*ESICRASSSRPKFQ
Trigger: CTGGAACTTGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAAGGAAGCCGATGCCAGCCCCGCCTCTGCAGGCATATGCCGAATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583877.5
CDS GCA 72 bp TTGGAGAGCATCTGTCGGGCCTCATCCAGCCGGCCCTaGAGCACCAAGATGGTCACCTGGGGCCACTTCAAT +
Preference number: 6 (lower is better)
Translates to: LESICRASSSRP*STKMVTWGHFN
Trigger: ATTGAAGTGGCCCCAGGTGACCATCTTGGTGCTGCAGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581104.5
CDS CCA 72 bp CCAGGCTGGACTTCAAGAGAGACTCCAGGTGAGGGCTaGTGGCGAATGTGCTGTCCTGGAGGTACCGCTCAC +
Preference number: 6 (lower is better)
Translates to: PGWTSRETPGEG*WRMCCPGGTAH
Trigger: GTGAGCGGTACCTCCAGGACAGCACATTCGCCACCAGCCCTCACCTGGAGTCTCTCTTGAAGTCCAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583070.5
CDS GCA 72 bp TTGGAGAGCATCTGTCGGGCCTCATCCAGCCGGCCCTaGAGCACCAAGATGGTCACCAAGTTCCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LESICRASSSRP*STKMVTKFQKL
Trigger: CAGCTTCTGGAACTTGGTGACCATCTTGGTGCTGCAGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000579324.5
ENST00000583948.5
CDS CCA 72 bp CTTCCCAGACCTTCAAGAGAGACTCCAGGTGAGGGCTaGTGGCGAATGTGCTGTCCTGGAGGTACCGCTCAC +
Preference number: 6 (lower is better)
Translates to: LPRPSRETPGEG*WRMCCPGGTAH
Trigger: GTGAGCGGTACCTCCAGGACAGCACATTCGCCACCAGCCCTCACCTGGAGTCTCTCTTGAAGGTCTGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS TCA 72 bp CCAAATCAGAAAAGCAGCCTCGCTCACAGTAATCCCTaGGGAACCTGCAGGGCCCGGCCCAGAGATCAGAGC +
Preference number: 6 (lower is better)
Translates to: PNQKSSLAHSNP*GTCRARPRDQS
Trigger: GCTCTGATCTCTGGGCCGGGCCCTGCAGGTTCCTCAGGGATTACTGTGAGCGAGGCTGCTTTTCTGATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578294.1
CDS TCA 72 bp AACAGGTCCAGGCTGGACTTCAAGAGAGACTCCAGGTaGGGGCTGGTGGCGAATGTGCTGTCCTGGAGGTAC +
Preference number: 6 (lower is better)
Translates to: NRSRLDFKRDSR*GLVANVLSWRY
Trigger: GTACCTCCAGGACAGCACATTCGCCACCAGCCCTCACCTGGAGTCTCTCTTGAAGTCCAGCCTGGACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583070.5
CDS TCA 72 bp AATCAGGGCACAGGCCGCGTCCCACAAGAGTGGGGGTaGGCAAGAAACCCCACATGTCCTGTCCCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: NQGTGRVPQEWG*ARNPTCPVPQR
Trigger: TCTTTGAGGGACAGGACATGTGGGGTTTCTTGCTCACCCCCACTCTTGTGGGACGCGGCCTGTGCCCTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582681.1
CDS GCA 72 bp CAAGGAGGACCAAGCTCCTGCCACTGCTGCACTGGATaGCACAGCCCCCATAGGAAGCCAACATGGATGCAA +
Preference number: 6 (lower is better)
Translates to: QGGPSSCHCCTG*HSPHRKPTWMQ
Trigger: TTGCATCCATGTTGGCTTCCTATGGGGGCTGTGGCATCCAGTGCAGCAGTGGCAGGAGCTTGGTCCTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS CAA 90 bp ACATCTTGCCCAACTCCCAGTGAAGTGCACCCCAGCTGTTTCCTCTaGCCAGACAGCAAGGAACTGGCCCGTCTTCAGAGGAAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: TSCPTPSEVHPSCFL*PDSKELARLQRKLH
Trigger: GTGCAGCTTCCTCTGAAGACGGGCCAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580879.5
CDS CCA 72 bp AGAACATCTGCCGACAAACTGTCCACCTCGCACACATaGAGCCGGACCCAGTCAAGGAGATGGAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: RTSADKLSTSHT*SRTQSRRWRRR
Trigger: TCTCCTCCTCCATCTCCTTGACTGGGTCCGGCTCCATGTGTGCGAGGTGGACAGTTTGTCGGCAGATGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000578830.5
ENST00000579298.5
ENST00000579324.5
ENST00000583948.5
CDS CCA 72 bp CAGCCTGAAGCCCAGTGGTTCGGTAGCTCACGTCACTaGAGTGAGACTCTTGGAACACGCCATCCCATAAGG +
Preference number: 6 (lower is better)
Translates to: QPEAQWFGSSRH*SETLGTRHPIR
Trigger: CCTTATGGGATGGCGTGTTCCAAGAGTCTCACTCCAGTGACGTGAGCTACCGAACCACTGGGCTTCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449421.6
CDS CAA 90 bp GGGCCTCATCCAGCCGGCCCAAGTTCCAGAAGCTGTCATGTTTGCTaGGATTCTCACTGCCCAGAACATCTGCCGACAAACTGTCCACCT +
Preference number: 6 (lower is better)
Translates to: GPHPAGPSSRSCHVC*DSHCPEHLPTNCPP
Trigger: AGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGGCCGGCTGGATGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583877.5
CDS CAA 90 bp ACATCTTGCCCAACTCCCAGTGAAGTGCACCCCAGCTGTTTCCTCTaGCCAGACAGCAAGGAACTGGCCCGTCTTCAGAGGAAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: TSCPTPSEVHPSCFL*PDSKELARLQRKRA
Trigger: AGCTCTCTTCCTCTGAAGACGGGCCAGTTCCTTGCTGTCTGGCAAGAGGAAACAGCTGGGGTGCACTTCACTGGGAGTTGGGCAAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581335.1
CDS TCA 72 bp CTGCTCTCAGCTAAGGGCACCGGATTTCAACTAGTCTaGAAGCTCTCGCCATCACGGCAGAGCGACAGACAG +
Preference number: 6 (lower is better)
Translates to: LLSAKGTGFQLV*KLSPSRQSDRQ
Trigger: CTGTCTGTCGCTCTGCCGTGATGGCGAGAGCTTTCAGACTAGTTGAAATCCGGTGCCCTTAGCTGAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS TCA 72 bp CTTCAGAGGAAGAGAGCTCAGATCCCTTCCTGCTTGTaGGAGTGGAGAGAGGCTGAGACTGGGGGACTGCAA +
Preference number: 6 (lower is better)
Translates to: LQRKRAQIPSCL*EWREAETGGLQ
Trigger: TTGCAGTCCCCCAGTCTCAGCCTCTCTCCACTCTCACAAGCAGGAAGGGATCTGAGCTCTCTTCCTCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581335.1
CDS TCA 72 bp TTTCCCACTAACAGAGCTCAGATCCCTTCCTGCTTGTaGGAGTGGAGAGAGGCTGAGACTGGGGGACTGCAA +
Preference number: 6 (lower is better)
Translates to: FPTNRAQIPSCL*EWREAETGGLQ
Trigger: TTGCAGTCCCCCAGTCTCAGCCTCTCTCCACTCTCACAAGCAGGAAGGGATCTGAGCTCTGTTAGTGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS GCA 72 bp GTCATGTTTGCTTGGATTCTCACTGCCCAGAACATCTaGCGACAAACTGTCCACCTCGCACACATGGAGCCG +
Preference number: 6 (lower is better)
Translates to: VMFAWILTAQNI*RQTVHLAHMEP
Trigger: CGGCTCCATGTGTGCGAGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000578830.5
ENST00000579298.5
ENST00000579324.5
ENST00000583877.5
ENST00000583948.5
CDS GCA 72 bp ACAGCCTCTGAGTCAGGATCCCCTGGCTGCCTTTTCTaGCCCTTAGGGTCTGGCACGATTATTGACATAGGA +
Preference number: 6 (lower is better)
Translates to: TASESGSPGCLF*PLGSGTIIDIG
Trigger: TCCTATGTCAATAATCGTGCCAGACCCTAAGGGGCAGAAAAGGCAGCCAGGGGATCCTGACTCAGAGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS GCA 72 bp GGGCCATACTGGAGCTGCTCGGTATCAGATTCTCCATaGACAGGTCTTCTTGACGTCAAGTCCTCCAGACAC +
Preference number: 6 (lower is better)
Translates to: GPYWSCSVSDSP*TGLLDVKSSRH
Trigger: GTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGTATGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS GCA 72 bp GCCCCCATAGGAAGCCAACATGGATGCAATCTGAACTaGTTCCCAGACCTTCAAGAGAGACTCCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: APIGSQHGCNLN*FPDLQERLQVR
Trigger: CCTCACCTGGAGTCTCTCTTGAAGGTCTGGGAAGCAGTTCAGATTGCATCCATGTTGGCTTCCTATGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS GCA 72 bp GGTGGGCCACAAACCACCAGTTGCTCAGGGCGATGCTaGAGATTCAGACACCAAGGCAAGAAGGAAAATCAG +
Preference number: 6 (lower is better)
Translates to: GGPQTTSCSGRC*RFRHQGKKENQ
Trigger: CTGATTTTCCTTCTTGCCTTGGTGTCTGAATCTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582681.1
CDS GCA 72 bp CATCCAGCCGGCCCAAGTTCCAGAAGCTGTCATGTTTaGTTGGATTCTCACTGCCCAGAACATCTGCCGACA +
Preference number: 6 (lower is better)
Translates to: HPAGPSSRSCHV*LDSHCPEHLPT
Trigger: TGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGGCCGGCTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583877.5
CDS CAA 72 bp GACAAAATGGAGACCTGGCTGCTGAACTGGCGGCCATaGGCTGGATCTTTAGCAGCAATTGCAACCTGGTGC +
Preference number: 6 (lower is better)
Translates to: DKMETWLLNWRP*AGSLAAIATWC
Trigger: GCACCAGGTTGCAATTGCTGCTAAAGATCCAGCCAATGGCCGCCAGTTCAGCAGCCAGGTCTCCATTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000577208.5
ENST00000579298.5
ENST00000579324.5
ENST00000581104.5
ENST00000583548.1
ENST00000583569.5
ENST00000583948.5
CDS CAA 72 bp AGGCTGAGACTGGGGGACTGCAAGCCTAATCATTCCTaGTCTGTGTCCGGCACGAGAGTGATGTTGTTCACC +
Preference number: 6 (lower is better)
Translates to: RLRLGDCKPNHS*SVSGTRVMLFT
Trigger: GGTGAACAACATCACTCTCGTGCCGGACACAGACAAGGAATGATTAGGCTTGCAGTCCCCCAGTCTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540768.5
ENST00000581335.1
CDS CAA 72 bp CCAGCCGGCCCAAGTTCCAGAAGCTGTCATGTTTGCTaGGATTCTCACTGCCCAGAACATCTGCCGACAAAC +
Preference number: 6 (lower is better)
Translates to: PAGPSSRSCHVC*DSHCPEHLPTN
Trigger: GTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGGCCGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583877.5
CDS CAA 90 bp AGTGGAGAGAGGCTGAGACTGGGGGACTGCAAGCCTAATCATTCCTaGTCTGTGTCCGGCACGAGAGTGATGTTGTTCACCCCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: SGERLRLGDCKPNHS*SVSGTRVMLFTPLH
Trigger: ATGAAGAGGGGTGAACAACATCACTCTCGTGCCGGACACAGACAAGGAATGATTAGGCTTGCAGTCCCCCAGTCTCAGCCTCTCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540768.5
ENST00000581335.1
CDS TCA 72 bp ACACACTTCCCTGCCGCCCAGAACTGTGCATGGGTCTaGCTGATACATCCCATGAGAAAACAAGTGCCCACA +
Preference number: 6 (lower is better)
Translates to: THFPAAQNCAWV*LIHPMRKQVPT
Trigger: TGTGGGCACTTGTTTTCTCATGGGATGTATCAGTCAGACCCATGCACAGTTCTGGGCGGCAGGGAAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS GCA 72 bp CAGGCAGGGCTGCTGTATAACGAACCCCAGAGAAGGTaGCTTGTTCTTTCACTAAGGGCCAAAGGAAAGGGT +
Preference number: 6 (lower is better)
Translates to: QAGLLYNEPQRR*LVLSLRAKGKG
Trigger: ACCCTTTCCTTTGGCCCTTAGTGAAAGAACAAGGCACCTTCTCTGGGGTTCGTTATACAGCAGCCCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583948.5
CDS GCA 72 bp TCAGGTGGGCCACAAACCACCAGTTGCTCAGGGCGATaGTGCAGATTCAGACACCAAGGCAAGAAGGAAAAT +
Preference number: 6 (lower is better)
Translates to: SGGPQTTSCSGR*CRFRHQGKKEN
Trigger: ATTTTCCTTCTTGCCTTGGTGTCTGAATCTGCAGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582681.1
CDS CCA 72 bp TGCACTGGATGCCACAGCCCCCATAGGAAGCCAACATaGATGCAATCTGAACTGCTTCCCAGACCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: CTGCHSPHRKPT*MQSELLPRPSR
Trigger: TCTTGAAGGTCTGGGAAGCAGTTCAGATTGCATCCATGTTGGCTTCCTATGGGGGCTGTGGCATCCAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS CCA 72 bp CAGCCGGCCCAAGTTCCAGAAGCTGTCATGTTTGCTTaGATTCTCACTGCCCAGAACATCTGCCGACAAACT +
Preference number: 6 (lower is better)
Translates to: QPAQVPEAVMFA*ILTAQNICRQT
Trigger: AGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGGCCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583877.5
CDS CAA 90 bp GCAGCACCAAGATGGTCACCAAGTTCCAGAAGCTGTCATGTTTGCTaGGATTCTCACTGCCCAGAACATCTGCCGACAAACTGTCCACCT +
Preference number: 6 (lower is better)
Translates to: AAPRWSPSSRSCHVC*DSHCPEHLPTNCPP
Trigger: AGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGTGACCATCTTGGTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000579324.5
ENST00000583948.5
CDS GCA 72 bp CCAGAAAGAGACACACTTCCCTGCCGCCCAGAACTGTaGATGGGTCTGACTGATACATCCCATGAGAAAACA +
Preference number: 6 (lower is better)
Translates to: PERDTLPCRPEL*MGLTDTSHEKT
Trigger: TGTTTTCTCATGGGATGTATCAGTCAGACCCATGCACAGTTCTGGGCGGCAGGGAAGTGTGTCTCTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS CCA 72 bp CGAGCTCACTCACCTGGGCATAGTAGTGCAGATCAATaGGTTTTACTGTGGGATTGGAGTACAAGAGCCGAG +
Preference number: 6 (lower is better)
Translates to: RAHSPGHSSADQ*VLLWDWSTRAE
Trigger: CTCGGCTCTTGTACTCCAATCCCACAGTAAAACCCATTGATCTGCACTACTATGCCCAGGTGAGTGAGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577561.1
CDS CCA 72 bp GTTCCCGGGCAAGTTCCAGAAGCTGTCATGTTTGCTTaGATTCTCACTGCCCAGAACATCTGCCGACAAACT +
Preference number: 6 (lower is better)
Translates to: VPGQVPEAVMFA*ILTAQNICRQT
Trigger: AGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGCCCGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579298.5
CDS CAA 72 bp TGTTCCCGGGCAAGTTCCAGAAGCTGTCATGTTTGCTaGGATTCTCACTGCCCAGAACATCTGCCGACAAAC +
Preference number: 6 (lower is better)
Translates to: CSRASSRSCHVC*DSHCPEHLPTN
Trigger: GTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGCCCGGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579298.5
CDS TCA 72 bp TGCTCTAACAAGGCAGCTTCGTCTCCCAGCATAATCTaGGGAGAGACATTTGTGCTGAACTCTGTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: CSNKAASSPSII*GETFVLNSVLL
Trigger: GAGGAGGACAGAGTTCAGCACAAATGTCTCTCCTCAGATTATGCTGGGAGACGAAGCTGCCTTGTTAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577645.5
CDS GCA 72 bp CCAAGATGGTCACCAAGTTCCAGAAGCTGTCATGTTTaGTTGGATTCTCACTGCCCAGAACATCTGCCGACA +
Preference number: 6 (lower is better)
Translates to: PRWSPSSRSCHV*LDSHCPEHLPT
Trigger: TGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGTGACCATCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000579324.5
ENST00000583948.5
CDS CCA 72 bp CTGGAAATTCTGAATAATACCCAGCCTGAAGCCCAGTaGTTCGGTAGCTCACGTCACTGGAGTGAGACTCTT +
Preference number: 6 (lower is better)
Translates to: LEILNNTQPEAQ*FGSSRHWSETL
Trigger: AAGAGTCTCACTCCAGTGACGTGAGCTACCGAACCACTGGGCTTCAGGCTGGGTATTATTCAGAATTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449421.6
CDS CCA 72 bp AAACAGGTCCAGGCTGGGCATAGTAGTGCAGATCAATaGGTTTTACTGTGGGATTGGAGTACAAGAGCCGAG +
Preference number: 6 (lower is better)
Translates to: KQVQAGHSSADQ*VLLWDWSTRAE
Trigger: CTCGGCTCTTGTACTCCAATCCCACAGTAAAACCCATTGATCTGCACTACTATGCCCAGCCTGGACCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578830.5
CDS CCA 72 bp GGAAAGGGTCTTCCTGGGCATAGTAGTGCAGATCAATaGGTTTTACTGTGGGATTGGAGTACAAGAGCCGAG +
Preference number: 6 (lower is better)
Translates to: GKGLPGHSSADQ*VLLWDWSTRAE
Trigger: CTCGGCTCTTGTACTCCAATCCCACAGTAAAACCCATTGATCTGCACTACTATGCCCAGGAAGACCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583948.5
CDS CAA 90 bp CATACTGGAGCTGCTCGGTATCAGATTCTCCATGCACAGGTCTTCTaGACGTCAAGTCCTCCAGACACCGCATCAACTCATAAGTCTGTT +
Preference number: 6 (lower is better)
Translates to: HTGAARYQILHAQVF*TSSPPDTASTHKSV
Trigger: AACAGACTTATGAGTTGATGCGGTGTCTGGAGGACTTGACGTCAAGAAGACCTGTGCATGGAGAATCTGATACCGAGCAGCTCCAGTATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579900.5
CDS CCA 72 bp GATGGTCACCAAGTTCCAGAAGCTGTCATGTTTGCTTaGATTCTCACTGCCCAGAACATCTGCCGACAAACT +
Preference number: 6 (lower is better)
Translates to: DGHQVPEAVMFA*ILTAQNICRQT
Trigger: AGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGTGACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000579324.5
ENST00000583948.5
CDS CAA 72 bp AGATGGTCACCAAGTTCCAGAAGCTGTCATGTTTGCTaGGATTCTCACTGCCCAGAACATCTGCCGACAAAC +
Preference number: 6 (lower is better)
Translates to: RWSPSSRSCHVC*DSHCPEHLPTN
Trigger: GTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATGACAGCTTCTGGAACTTGGTGACCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000579324.5
ENST00000583948.5
CDS CAA 72 bp GCACACTTCCTAAAACTGCTACTGCCTCTGAAGACATaGCAGCCCATTTCACAATTCCTGGGACAAGCTCTG +
Preference number: 6 (lower is better)
Translates to: AHFLKLLLPLKT*QPISQFLGQAL
Trigger: CAGAGCTTGTCCCAGGAATTGTGAAATGGGCTGCAATGTCTTCAGAGGCAGTAGCAGTTTTAGGAAGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540768.5
CDS TCA 72 bp AGCCTAATCATTCCTTGTCTGTGTCCGGCACGAGAGTaGTGTTGTTCACCCCTCTTCATGGTACTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: SLIIPCLCPARE*CCSPLFMVLLF
Trigger: AAAGAGAAGTACCATGAAGAGGGGTGAACAACATCACTCTCGTGCCGGACACAGACAAGGAATGATTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540768.5
ENST00000581335.1
CDS GCA 72 bp TCTTGGAACACGCCATCCCATAAGGTGTCCATTAGGTaGCAAGAAACAGGCTTGCTGGCTTTTTCTAGATTT +
Preference number: 6 (lower is better)
Translates to: SWNTPSHKVSIR*QETGLLAFSRF
Trigger: AAATCTAGAAAAAGCCAGCAAGCCTGTTTCTTGGCACCTAATGGACACCTTATGGGATGGCGTGTTCCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449421.6
CDS CAA 72 bp AATCATTCCTTGTCTGTGTCCGGCACGAGAGTGATGTaGTTCACCCCTCTTCATGGTACTTCTCTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: NHSLSVSGTRVM*FTPLHGTSLSL
Trigger: AAGAGAAAGAGAAGTACCATGAAGAGGGGTGAACAACATCACTCTCGTGCCGGACACAGACAAGGAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540768.5
ENST00000581335.1
CDS TCA 72 bp AACCTGGTGCATTTCCTCCATACATGCTCTGATGACTaGTCGGTAGTTTTTACTCACTCGAACCAATTGAGA +
Preference number: 6 (lower is better)
Translates to: NLVHFLHTCSDD*SVVFTHSNQLR
Trigger: TCTCAATTGGTTCGAGTGAGTAAAAACTACCGATCAGTCATCAGAGCATGTATGGAGGAAATGCACCAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000577208.5
ENST00000579298.5
ENST00000579324.5
ENST00000581104.5
ENST00000583548.1
ENST00000583569.5
ENST00000583948.5
CDS TCA 72 bp CTCATGTTGGAACCGAAACTGCACTCTTTGATTACTTaGTGGATGTCAAACTCAAAGGCTGCCAACAAGATG +
Preference number: 6 (lower is better)
Translates to: LMLEPKLHSLIT*WMSNSKAANKM
Trigger: CATCTTGTTGGCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGTTTCGGTTCCAACATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579557.5
CDS CCA 72 bp GTCAAAATACATTTGGTTCTTCTTGGAATTCACGCCTaGAATCAATCTAACAGGCTGGTGTACAGTGGTGTA +
Preference number: 6 (lower is better)
Translates to: VKIHLVLLGIHA*NQSNRLVYSGV
Trigger: TACACCACTGTACACCAGCCTGTTAGATTGATTCCAGGCGTGAATTCCAAGAAGAACCAAATGTATTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582833.5
CDS CAA 72 bp TCTCATGTTGGAACCGAAACTGCACTCTTTGATTACTaGATGGATGTCAAACTCAAAGGCTGCCAACAAGAT +
Preference number: 6 (lower is better)
Translates to: SHVGTETALFDY*MDVKLKGCQQD
Trigger: ATCTTGTTGGCAGCCTTTGAGTTTGACATCCATCAAGTAATCAAAGAGTGCAGTTTCGGTTCCAACATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579557.5
CDS CAA 90 bp GCCCAGAAAGATTCCATGGGATTCATTGAAGAGTTTTCTCAAGATTaGAGAGTAAACATCTACATCCTTACGGATGATATAGATAAAGGG +
Preference number: 6 (lower is better)
Translates to: AQKDSMGFIEEFSQD*RVNIYILTDDIDKG
Trigger: CCCTTTATCTATATCATCCGTAAGGATGTAGATGTTTACTCTCAAATCTTGAGAAAACTCTTCAATGAATCCCATGGAATCTTTCTGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000577208.5
ENST00000579298.5
ENST00000579324.5
ENST00000581104.5
ENST00000583548.1
ENST00000583569.5
ENST00000583948.5
CDS CAA 72 bp GATTCCATGGGATTCATTGAAGAGTTTTCTCAAGATTaGAGAGTAAACATCTACATCCTTACGGATGATATA +
Preference number: 6 (lower is better)
Translates to: DSMGFIEEFSQD*RVNIYILTDDI
Trigger: TATATCATCCGTAAGGATGTAGATGTTTACTCTCAAATCTTGAGAAAACTCTTCAATGAATCCCATGGAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245544.9
ENST00000449421.6
ENST00000577208.5
ENST00000579298.5
ENST00000579324.5
ENST00000581104.5
ENST00000583548.1
ENST00000583569.5
ENST00000583948.5