Pregenerated sensors for NUP62CL (Homo sapiens)
Ensembl gene IDs: ENSG00000198088Ensembl transcript IDs: ENST00000372466.8, ENST00000421752.1, ENST00000432145.5, ENST00000484614.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAACGACATGCTGAAGATATGGTCATTCACTAAAAAGCAGTGTTaGCATTGTGTGCATGCTCCTCGTGACGATAATCCTCGAAAACCC | + |
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Preference number: 1 (lower is better) Translates to: RNDMLKIWSFTKKQC*HCVHAPRDDNPRKP Trigger: GGGTTTTCGAGGATTATCGTCACGAGGAGCATGCACACAATGTCAACACTGCTTTTTAGTGAATGACCATATCTTCAGCATGTCGTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR-3UTR CCA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCAAGAATTCTGCAGATCTaGTGGAGATCTCCACATGCT | + |
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Preference number: 2 (lower is better) Translates to: RDDNPRKPVLPLLPSFAARILQI*WRSPHA Trigger: AGCATGTGGAGATCTCCACCAGATCTGCAGAATTCT...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| 3UTR-3UTR TCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGAACTAAAAAGCAGTGTTaGCATTGTGTGCATGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRTKKQC*HCVHAP Trigger: AGGAGCATGCACACAATGTCAACACTGCTTTTTAGT...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR-3UTR TCA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCACCAGAAACGACATGCTaGAGATATGGTCATTCACTA | + |
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Preference number: 2 (lower is better) Translates to: RDDNPRKPVLPLLPSFAAPETTC*RYGHSL Trigger: TAGTGAATGACCATATCTTCAGCATGTCGTTTCTGG...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGTTCCGATCAATCCACTaGAGGGAGTCCATATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QYLALYRLACTFGRHHPMFRSIH*RESIWA Trigger: TGCCCATATGGACTCCCTGCAGTGGATTGATCGGAA...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGCAGCATCTAAGAGGTTaGTGTCTGGACAAAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QYLALYRLACTFGRHHPMQHLRG*CLDKGA Trigger: AGCCCCTTTGTCCAGACAGCAACCTCTTAGATGCTG...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR-3UTR GCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGAAGAAATTCTAGTTCCTaGTGCTGTGACAGGATAAAA | + |
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Preference number: 2 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRRNSSS*CCDRIK Trigger: TTTTATCCTGTCACAGCAGCAGGAACTAGAATTTCT...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| 3UTR-3UTR CCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGAGACATGCTGAAGATATaGTCATTCACTAAAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRDMLKI*SFTKKQ Trigger: CTGCTTTTTAGTGAATGACCATATCTTCAGCATGTC...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR-3UTR TCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGACTAAAAAGCAGTGTTaGCATTGTGTGCATGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: YDSTGVRRMMCTDARESKTKKQC*HCVHAP Trigger: AGGAGCATGCACACAATGTCAACACTGCTTTTTAGT...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR-3UTR TCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGCCAGAAACGACATGCTaGAGATATGGTCATTCACTA | + |
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Preference number: 2 (lower is better) Translates to: YDSTGVRRMMCTDARESKPETTC*RYGHSL Trigger: TAGTGAATGACCATATCTTCAGCATGTCGTTTCTGG...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR-3UTR GCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGAATTCTAGTTCCTGCTaGTGTGACAGGATAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: YDSTGVRRMMCTDARESKNSSSC*CDRIKS Trigger: GGATTTTATCCTGTCACAGCAGCAGGAACTAGAATT...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGGACATGCTGAAGATATaGTCATTCACTAAAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QYLALYRLACTFGRHHPMDMLKI*SFTKKQ Trigger: CTGCTTTTTAGTGAATGACCATATCTTCAGCATGTC...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR GCA 72 bp | TGCAGATCTGGTGGAGATCTCCACATGCTCCTCATCTaGATCCTGCAGATAATGAAGTCCACTCTGGTCACG | + |
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Preference number: 3 (lower is better) Translates to: CRSGGDLHMLLI*ILQIMKSTLVT Trigger: CGTGACCAGAGTGGACTTCATTATCTGCAGGATGCAGATGAGGAGCATGTGGAGATCTCCACCAGATCTGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| 3UTR GCA 72 bp | TCCACTGCAGGGAGTCCATATGGGCATTCAGAATTCTaGAGATCTGGTGGAGATCTCCACATGCTCCTCATC | + |
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Preference number: 3 (lower is better) Translates to: STAGSPYGHSEF*RSGGDLHMLLI Trigger: GATGAGGAGCATGTGGAGATCTCCACCAGATCTGCAGAATTCTGAATGCCCATATGGACTCCCTGCAGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| 3UTR GCA 72 bp | TTCCTTCGCAGCATGCCTGAATTCCGATCAATCCACTaGAGGGAGTCCATATGGGCATTCAGAATTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: FLRSMPEFRSIH*RESIWAFRILQ Trigger: CTGCAGAATTCTGAATGCCCATATGGACTCCCTGCAGTGGATTGATCGGAATTCAGGCATGCTGCGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| 3UTR GCA 72 bp | TATGGTCATTCACTAAAAAGCAGTGTTGACATTGTGTaGATGCTCCTCGTGACGATAATCCTCGAAAACCCG | + |
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Preference number: 3 (lower is better) Translates to: YGHSLKSSVDIV*MLLVTIILENP Trigger: CGGGTTTTCGAGGATTATCGTCACGAGGAGCATGCACACAATGTCAACACTGCTTTTTAGTGAATGACCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | CAGAATTCTGCAGATCTGGTGGAGATCTCCACATGCTCCTCATCTGCATCCTGCGGGCGGGTCCGGACCTaGTCGAGCCGGAAAGAATCG | + |
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Preference number: 4 (lower is better) Translates to: QNSADLVEISTCSSSASCGRVRT*SSRKES Trigger: CGATTCTTTCCGGCTCGAGCAGGTCCGGACCCGCCC...GCAGGATGCAGATGAGGAGCATGTGGAGATCTCCACCAGATCTGCAGAATTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | TCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCTCGCTGTCCGGCCCTaGACTATACGGGCAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SSKTRVTTSTFLRSMPEFLAVRP*TIRAGL Trigger: GAGGCCTGCCCGTATAGTTCAGGGCCGGACAGCGAG...GAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TGCATGCTCCTCGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTGGGCGGGTCCGGACCTaGTCGAGCCGGAAAGAATCG | + |
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Preference number: 4 (lower is better) Translates to: CMLLVTIILENPCYHFYLGRVRT*SSRKES Trigger: CGATTCTTTCCGGCTCGAGCAGGTCCGGACCCGCCC...AAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACGAGGAGCATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | ATGCTCCTCATCTGCATCCTGCAGATAATGAAGTCCACTCTGGTCACGCGTAGAGGAGCCAAACCTTACTaGCAAGTCGCCGCCGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: MLLICILQIMKSTLVTRRGAKPY*QVAAAR Trigger: GCGAGCGGCGGCGACTTGCCAGTAAGGTTTGGCTCC...TCTACGCGTGACCAGAGTGGACTTCATTATCTGCAGGATGCAGATGAGGAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | ATGCTCCTCATCTGCATCCTGCAGATAATGAAGTCCACTCTGGTCACGCGTAGATGGGCAGGTTCCCGCTaGAGTGAAGCTAACCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: MLLICILQIMKSTLVTRRWAGSR*SEANRD Trigger: GTCTCGGTTAGCTTCACTTCAGCGGGAACCTGCCCA...TCTACGCGTGACCAGAGTGGACTTCATTATCTGCAGGATGCAGATGAGGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | GTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGATCAATCCACTTGGGCAGGTTCCCGCTaGAGTGAAGCTAACCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: VLPLLPSFAACLNSDQSTWAGSR*SEANRD Trigger: GTCTCGGTTAGCTTCACTTCAGCGGGAACCTGCCCA...AGTGGATTGATCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGCTCGCTGTCCGGCCCTaGACTATACGGGCAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QYLALYRLACTFGRHHPMLAVRP*TIRAGL Trigger: GAGGCCTGCCCGTATAGTTCAGGGCCGGACAGCGAG...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGAGGTGGCAACAGCAGCTaGTGGAGCCAAACCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRGGNSS*WSQTLL Trigger: CAGTAAGGTTTGGCTCCAGCAGCTGCTGTTGCCACC...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGATATGGTCCCAAGCATTaGCCTGAGTGGCCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRYGPKH*PEWPGE Trigger: TTCTCCAGGCCACTCAGGTCAATGCTTGGGACCATA...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372466.8 |
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| CDS-3UTR GCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGAGGTGGCAACAGCAGCTaGTGGAGCCAAACCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRGGNSS*WSQTCK Trigger: TTTACAGGTTTGGCTCCAGCAGCTGCTGTTGCCACC...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372466.8 |
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| CDS-3UTR GCA 90 bp | CAGAATTCTGCAGATCTGGTGGAGATCTCCACATGCTCCTCATCTGCATCCTGCTTCCGATCAATCCACTaGAGGGAGTCCATATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QNSADLVEISTCSSSASCFRSIH*RESIWA Trigger: TGCCCATATGGACTCCCTGCAGTGGATTGATCGGAA...GCAGGATGCAGATGAGGAGCATGTGGAGATCTCCACCAGATCTGCAGAATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | CAGAATTCTGCAGATCTGGTGGAGATCTCCACATGCTCCTCATCTGCATCCTGCCAGCATCTAAGAGGTTaGTGTCTGGACAAAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QNSADLVEISTCSSSASCQHLRG*CLDKGA Trigger: AGCCCCTTTGTCCAGACAGCAACCTCTTAGATGCTG...GCAGGATGCAGATGAGGAGCATGTGGAGATCTCCACCAGATCTGCAGAATTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGACTCCAAACCCTTACTaGCAAGTCGCCGCCGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: YDSTGVRRMMCTDARESKTPNPY*QVAAAR Trigger: GCGAGCGGCGGCGACTTGCCAGTAAGGGTTTGGAGT...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372466.8 |
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| CDS-3UTR CCA 90 bp | TGCATGCTCCTCGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTGGCAACAGCAGCTGCTaGAGCCAAACCTTACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CMLLVTIILENPCYHFYLGNSSC*SQTLLA Trigger: TGCCAGTAAGGTTTGGCTCCAGCAGCTGCTGTTGCC...AAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACGAGGAGCATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCAAAACTGCATGGTGCTTaGACTAGTGGTGGTGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: RDDNPRKPVLPLLPSFAAKLHGA*TSGGGN Trigger: GTTGCCACCACCACTAGTTCAAGCACCATGCAGTTT...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TGCATGCTCCTCGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTGTGGAGATCTCCACATaGTCCTCATCTGCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: CMLLVTIILENPCYHFYLVEIST*SSSASC Trigger: GCAGGATGCAGATGAGGAGCATGTGGAGATCTCCAC...AAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACGAGGAGCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGAGCAGACATCACCCTATaGTTCAACTGGAGTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRADITL*FNWSEK Trigger: CTTCTCACTCCAGTTGAATCATAGGGTGATGTCTGC...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | ATGCTCCTCATCTGCATCCTGCAGATAATGAAGTCCACTCTGGTCACGCGTAGATGCAGGGAGTCCATATaGGCATTCAGAATTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: MLLICILQIMKSTLVTRRCRESI*AFRILQ Trigger: CTGCAGAATTCTGAATGCCCATATGGACTCCCTGCA...TCTACGCGTGACCAGAGTGGACTTCATTATCTGCAGGATGCAGATGAGGAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCAATAAGACCCTCCAGATaGCCATATGTCATCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: RDDNPRKPVLPLLPSFAAIRPSR*PYVITG Trigger: TCCTGTGATGACATATGGTCATCTGGAGGGTCTTAT...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372466.8 |
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| CDS-3UTR GCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGGTGGAGATCTCCACATaGTCCTCATCTGCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: YDSTGVRRMMCTDARESKVEIST*SSSASC Trigger: GCAGGATGCAGATGAGGAGCATGTGGAGATCTCCAC...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | TGCATGCTCCTCGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTATTCTGCAGATCTGGTaGAGATCTCCACATGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CMLLVTIILENPCYHFYLILQIW*RSPHAP Trigger: AGGAGCATGTGGAGATCTCCACCAGATCTGCAGAAT...AAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACGAGGAGCATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGAAGAATTCTGCAGATCTaGTGGAGATCTCCACATGCT | + |
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Preference number: 4 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRRILQI*WRSPHA Trigger: AGCATGTGGAGATCTCCACCAGATCTGCAGAATTCT...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | TCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCAGAAAGTACTTCTCTTaGTCTTCCAGCTCAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSKTRVTTSTFLRSMPEFRKYFS*SSSSRF Trigger: GAACCTTGAGCTGGAAGATCAAGAGAAGTACTTTCT...GAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372466.8 |
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| CDS-3UTR TCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGTCCCAAGCATTGACCTaGGTGGCCTGGAGAAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: QYLALYRLACTFGRHHPMSQALT*VAWRRK Trigger: CTTTCTTCTCCAGGCCACTCAGGTCAATGCTTGGGA...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372466.8 |
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| CDS-3UTR TCA 90 bp | ATGCTCCTCATCTGCATCCTGCAGATAATGAAGTCCACTCTGGTCACGCGTAGACCAGAAACGACATGCTaGAGATATGGTCATTCACTA | + |
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Preference number: 4 (lower is better) Translates to: MLLICILQIMKSTLVTRRPETTC*RYGHSL Trigger: TAGTGAATGACCATATCTTCAGCATGTCGTTTCTGG...TCTACGCGTGACCAGAGTGGACTTCATTATCTGCAGGATGCAGATGAGGAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | GTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGATCAATCCACTGACTTAGGTGAAACATaGAACACAGGAGACCAGACT | + |
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Preference number: 4 (lower is better) Translates to: VLPLLPSFAACLNSDQSTDLGET*NTGDQT Trigger: AGTCTGGTCTCCTGTGTTTCATGTTTCACCTAAGTC...AGTGGATTGATCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TGCATGCTCCTCGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTAGTGTTGACATTGTGTaGATGCTCCTCGTGACGATA | + |
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Preference number: 4 (lower is better) Translates to: CMLLVTIILENPCYHFYLSVDIV*MLLVTI Trigger: TATCGTCACGAGGAGCATGCACACAATGTCAACACT...AAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACGAGGAGCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCAGTTGGCATGTACTTTTaGCAGACATCACCCTATGAT | + |
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Preference number: 4 (lower is better) Translates to: RDDNPRKPVLPLLPSFAAVGMYF*QTSPYD Trigger: ATCATAGGGTGATGTCTGCCAAAAGTACATGCCAAC...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | TCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCGTTGGCATGTACTTTTaGCAGACATCACCCTATGAT | + |
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Preference number: 4 (lower is better) Translates to: SSKTRVTTSTFLRSMPEFVGMYF*QTSPYD Trigger: ATCATAGGGTGATGTCTGCCAAAAGTACATGCCAAC...GAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | TCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCTTTTCCTCCCTGCTCTaGATCTCTATAACACACTTT | + |
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Preference number: 4 (lower is better) Translates to: SSKTRVTTSTFLRSMPEFFSSLL*ISITHF Trigger: AAAGTGTGTTATAGAGATTCAGAGCAGGGAGGAAAA...GAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGAGATATTGAGGTAAACTaGATGGTGCTTGAACTAGTG | + |
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Preference number: 4 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRDIEVN*MVLELV Trigger: CACTAGTTCAAGCACCATGCAGTTTACCTCAATATC...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCAAATTCTAGTTCCTGCTaGTGTGACAGGATAAAATCC | + |
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Preference number: 4 (lower is better) Translates to: RDDNPRKPVLPLLPSFAANSSSC*CDRIKS Trigger: GGATTTTATCCTGTCACAGCAGCAGGAACTAGAATT...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGGGGCATTCAGAATTCTaGAGATCTGGTGGAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: YDSTGVRRMMCTDARESKGHSEF*RSGGDL Trigger: GAGATCTCCACCAGATCTGCAGAATTCTGAATGCCC...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCAGATAACAGTTGGTTTTaGTTCACAGTAAAGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: RDDNPRKPVLPLLPSFAADNSWF*FTVKPL Trigger: CAGTGGCTTTACTGTGAACCAAAACCAACTGTTATC...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGGCAGACATCACCCTATaGTTCAACTGGAGTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QYLALYRLACTFGRHHPMADITL*FNWSEK Trigger: CTTCTCACTCCAGTTGAATCATAGGGTGATGTCTGC...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGGACTTAGGTGAAACATaGAACACAGGAGACCAGACT | + |
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Preference number: 4 (lower is better) Translates to: YDSTGVRRMMCTDARESKDLGET*NTGDQT Trigger: AGTCTGGTCTCCTGTGTTTCATGTTTCACCTAAGTC...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TGCATGCTCCTCGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTGATATTGAGGTAAACTaGATGGTGCTTGAACTAGTG | + |
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Preference number: 4 (lower is better) Translates to: CMLLVTIILENPCYHFYLDIEVN*MVLELV Trigger: CACTAGTTCAAGCACCATGCAGTTTACCTCAATATC...AAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACGAGGAGCATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGCACATGCTCCTCATCTaGATCCTGCAGATAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: YDSTGVRRMMCTDARESKHMLLI*ILQIMK Trigger: CTTCATTATCTGCAGGATGCAGATGAGGAGCATGTG...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGAGTGTTGACATTGTGTaGATGCTCCTCGTGACGATA | + |
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Preference number: 4 (lower is better) Translates to: YDSTGVRRMMCTDARESKSVDIV*MLLVTI Trigger: TATCGTCACGAGGAGCATGCACACAATGTCAACACT...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | GTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGATCAATCCACTGATAACAGTTGGTTTTaGTTCACAGTAAAGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: VLPLLPSFAACLNSDQSTDNSWF*FTVKPL Trigger: CAGTGGCTTTACTGTGAACCAAAACCAACTGTTATC...AGTGGATTGATCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGTGCAGGGAGTCCATATaGGCATTCAGAATTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QYLALYRLACTFGRHHPMCRESI*AFRILQ Trigger: CTGCAGAATTCTGAATGCCCATATGGACTCCCTGCA...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | TCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCGACATGCTGAAGATATaGTCATTCACTAAAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSKTRVTTSTFLRSMPEFDMLKI*SFTKKQ Trigger: CTGCTTTTTAGTGAATGACCATATCTTCAGCATGTC...GAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGCACATGCTCCTCATCTaGATCCTGCAGATAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: QYLALYRLACTFGRHHPMHMLLI*ILQIMK Trigger: CTTCATTATCTGCAGGATGCAGATGAGGAGCATGTG...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CCA 90 bp | TGCATGCTCCTCGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTGACATGCTGAAGATATaGTCATTCACTAAAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CMLLVTIILENPCYHFYLDMLKI*SFTKKQ Trigger: CTGCTTTTTAGTGAATGACCATATCTTCAGCATGTC...AAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACGAGGAGCATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGACTAAAAAGCAGTGTTaGCATTGTGTGCATGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QYLALYRLACTFGRHHPMTKKQC*HCVHAP Trigger: AGGAGCATGCACACAATGTCAACACTGCTTTTTAGT...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGCCAGAAACGACATGCTaGAGATATGGTCATTCACTA | + |
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Preference number: 4 (lower is better) Translates to: QYLALYRLACTFGRHHPMPETTC*RYGHSL Trigger: TAGTGAATGACCATATCTTCAGCATGTCGTTTCTGG...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR TCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGTTTTCCTCCCTGCTCTaGATCTCTATAACACACTTT | + |
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Preference number: 4 (lower is better) Translates to: YDSTGVRRMMCTDARESKFSSLL*ISITHF Trigger: AAAGTGTGTTATAGAGATTCAGAGCAGGGAGGAAAA...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGAGAAATTCTAGTTCCTaGTGCTGTGACAGGATAAAA | + |
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Preference number: 4 (lower is better) Translates to: YDSTGVRRMMCTDARESKRNSSS*CCDRIK Trigger: TTTTATCCTGTCACAGCAGCAGGAACTAGAATTTCT...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR GCA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGAGAAATTCTAGTTCCTaGTGCTGTGACAGGATAAAA | + |
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Preference number: 4 (lower is better) Translates to: QYLALYRLACTFGRHHPMRNSSS*CCDRIK Trigger: TTTTATCCTGTCACAGCAGCAGGAACTAGAATTTCT...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| 3UTR CAA 72 bp | GGAGAAGAGACTTTACAGTATCTAGCACTATATAGGTaGGCATGTACTTTTGGCAGACATCACCCTATGATT | + |
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Preference number: 4 (lower is better) Translates to: GEETLQYLALYR*ACTFGRHHPMI Trigger: AATCATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTGTAAAGTCTCTTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CAA 90 bp | TCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGATCAGCATCTAAGAGGTaGCTGTCTGGACAAAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SKTRVTTSTFLRSMPEFRSASKR*LSGQRG Trigger: GCCCCTTTGTCCAGACAGCAACCTCTTAGATGCTGA...TCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CAA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCAATTGTGGTAGTAGTGTaGGTGGTGAAAGTGGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: RDDNPRKPVLPLLPSFAAIVVVV*VVKVAV Trigger: CACCGCCACTTTCACCACCAACACTACTACCACAAT...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CAA 90 bp | ATGCTCCTCATCTGCATCCTGCAGATAATGAAGTCCACTCTGGTCACGCGTAGAATTGTGGTAGTAGTGTaGGTGGTGAAAGTGGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: MLLICILQIMKSTLVTRRIVVVV*VVKVAV Trigger: CACCGCCACTTTCACCACCAACACTACTACCACAAT...TCTACGCGTGACCAGAGTGGACTTCATTATCTGCAGGATGCAGATGAGGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484614.5 |
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| CDS GCA 90 bp | CCAATAGCAGCAGTGGAGGTCAAAGAATTTGATATTGAGGTAAACTaGATGGTGCTTGAACTAGTGGTGGTGGCAACAGCAGCTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PIAAVEVKEFDIEVN*MVLELVVVATAAAG Trigger: TCCAGCAGCTGCTGTTGCCACCACCACTAGTTCAAGCACCATGCAGTTTACCTCAATATCAAATTCTTTGACCTCCACTGCTGCTATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372466.8 ENST00000421752.1 ENST00000484614.5 |
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| CDS-3UTR CAA 90 bp | CGTGACGATAATCCTCGAAAACCCGTGTTACCACTTCTACCTTCCTTCGCAGCACTAGCACTATATAGGTaGGCATGTACTTTTGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RDDNPRKPVLPLLPSFAALALYR*ACTFGR Trigger: TCTGCCAAAAGTACATGCCAACCTATATAGTGCTAG...TGCTGCGAAGGAAGGTAGAAGTGGTAACACGGGTTTTCGAGGATTATCGTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CAA 90 bp | GTGTTACCACTTCTACCTTCCTTCGCAGCATGCCTGAATTCCGATCAATCCACTGGTTTTCAAACCCTCTaGATAACAGTTGGTTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: VLPLLPSFAACLNSDQSTGFQTL*ITVGFG Trigger: ACCAAAACCAACTGTTATCAAGAGGGTTTGAAAACC...AGTGGATTGATCGGAATTCAGGCATGCTGCGAAGGAAGGTAGAAGTGGTAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS TCA 90 bp | TACGAATCATCTCACCATTCTCAATCAATGTATGGTCCCAAGCATTaGCCTGAGTGGCCTGGAGAAGAAAGTACTTCTCTTGATCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: YESSHHSQSMYGPKH*PEWPGEESTSLDLP Trigger: TGGAAGATCAAGAGAAGTACTTTCTTCTCCAGGCCACTCAGGTCAATGCTTGGGACCATACATTGATTGAGAATGGTGAGATGATTCGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372466.8 ENST00000421752.1 ENST00000432145.5 |
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| CDS-3UTR CAA 90 bp | TATGATTCAACTGGAGTGAGAAGGATGATGTGTACTGATGCCAGGGAGAGTAAGGGTTTTCAAACCCTCTaGATAACAGTTGGTTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: YDSTGVRRMMCTDARESKGFQTL*ITVGFG Trigger: ACCAAAACCAACTGTTATCAAGAGGGTTTGAAAACC...CTTACTCTCCCTGGCATCAGTACACATCATCCTTCTCACTCCAGTTGAATCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS-3UTR CAA 90 bp | CAGTATCTAGCACTATATAGGTTGGCATGTACTTTTGGCAGACATCACCCTATGCTAGCACTATATAGGTaGGCATGTACTTTTGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: QYLALYRLACTFGRHHPMLALYR*ACTFGR Trigger: TCTGCCAAAAGTACATGCCAACCTATATAGTGCTAG...CATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000484614.5 |
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| CDS CAA 90 bp | GTCCCAAGCATTGACCTGAGTGGCCTGGAGAAGAAAGTACTTCTCTaGATCTTCCAGCTCAAGGTTCCACTCATTTATAAGACCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VPSIDLSGLEKKVLL*IFQLKVPLIYKTLQ Trigger: CTGGAGGGTCTTATAAATGAGTGGAACCTTGAGCTGGAAGATCAAGAGAAGTACTTTCTTCTCCAGGCCACTCAGGTCAATGCTTGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372466.8 ENST00000421752.1 ENST00000432145.5 |
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| CDS CAA 72 bp | TTCACAGTAAAGCCACTGGTGATTGTGGTAGTAGTGTaGGTGGTGAAAGTGGCGGTGGTAGTCGTTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: FTVKPLVIVVVV*VVKVAVVVVEV Trigger: AACTTCAACGACTACCACCGCCACTTTCACCACCAACACTACTACCACAATCACCAGTGGCTTTACTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372466.8 ENST00000421752.1 ENST00000484614.5 |
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| CDS TCA 72 bp | AGCTCAAGGTTCCACTCATTTATAAGACCCTCCAGATaGCCATATGTCATCACAGGAGTTGCTACTACACTA | + |
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Preference number: 6 (lower is better) Translates to: SSRFHSFIRPSR*PYVITGVATTL Trigger: TAGTGTAGTAGCAACTCCTGTGATGACATATGGTCATCTGGAGGGTCTTATAAATGAGTGGAACCTTGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372466.8 ENST00000421752.1 |
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