RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUP54 (Homo sapiens)

Ensembl gene IDs: ENSG00000138750

Ensembl transcript IDs: ENST00000264883.8, ENST00000502850.5, ENST00000504173.1, ENST00000506098.5, ENST00000507257.5, ENST00000508583.5, ENST00000510569.5, ENST00000510884.5, ENST00000512151.5, ENST00000513352.1, ENST00000514307.5, ENST00000514901.5, ENST00000514987.5, ENST00000515460.5

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGAGTCCAGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTGAATaGAGAACCTGCAGTTGTAGATGTTGTCCCAAATCCTCCAAACCC +
Preference number: 1 (lower is better)
Translates to: KESSSACVSWGRKAE*RTCSCRCCPKSSKP
Trigger: GGGTTTGGAGGATTTGGGACAACATCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAACTAACACAGGCACTACTGGACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513352.1
3UTR GCA 90 bp AGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCCAAATCCTCCAAACCCACAGTACTA +
Preference number: 1 (lower is better)
Translates to: SSACVSWGRKAECRT*SCRCCPKSSKPTVL
Trigger: TAGTACTGTGGGTTTGGAGGATTTGGGACAACATCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAACTAACACAGGCACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513352.1
3UTR GCA 90 bp CCCTCTACATTTACAGTAAGGGTCTGGTTTCCTCCCAAAACTTTATaGAATGATTCTACCAACTGTTGTTGTTGGCTTCGAATCTCTGTT +
Preference number: 1 (lower is better)
Translates to: PSTFTVRVWFPPKTL*NDSTNCCCWLRISV
Trigger: AACAGAGATTCGAAGCCAACAACAACAGTTGGTAGAATCATTGCATAAAGTTTTGGGAGGAAACCAGACCCTTACTGTAAATGTAGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
3UTR TCA 90 bp TTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTG +
Preference number: 1 (lower is better)
Translates to: FLFPSMWSVSFLRKV*CSKKMHFTNLYTSL
Trigger: CAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
3UTR CCA 90 bp ACACCAAGTTGCTGCAATTGTGTTTTTATATTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTT +
Preference number: 1 (lower is better)
Translates to: TPSCCNCVFILACSK*AYSVVAGTLLEVPF
Trigger: AAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAATATAAAAACACAATTGCAGCAACTTGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR TCA 90 bp TTCCCGTTGTTGTGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACTTGGGGCAGAAAAGCTaGATGCAGAACCTGCAGTTG +
Preference number: 2 (lower is better)
Translates to: FPLLCQNQYQIQNLCSEYLGQKS*MQNLQL
Trigger: CAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAA...GTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTTGGCACAACAACGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513352.1
3UTR-3UTR GCA 90 bp TGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCCTAGTTTGCTGCTGCTaGTGTGTATTAAATCCTCCA +
Preference number: 2 (lower is better)
Translates to: WAYSVVAGTLLEVPFGERLVCCC*CVLNPP
Trigger: TGGAGGATTTAATACACAGCAGCAGCAGCAAACTAG...GCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502850.5
3UTR-3UTR TCA 90 bp CTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCAGCTGGAACTCTTCTTaGAGTACCATTTGGCGAACG +
Preference number: 2 (lower is better)
Translates to: LLSHLILNLQSSEKFLKTSWNSS*STIWRT
Trigger: CGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCT...GGTTTTAAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CCA 90 bp TTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATTTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCT +
Preference number: 2 (lower is better)
Translates to: FTLNRIQLNSQLLFISLNLACSK*AYSVVA
Trigger: AGCTACAACGCTATATGCCCATTTTGAACAAGCCAA...ATTCAGGCTGATGAAGAGCAGTTGCGAGTTCAGCTGGATACGATTCAGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp TTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATCCTCCCAAAACTTTATaGAATGATTCTACCAACTGT +
Preference number: 2 (lower is better)
Translates to: FTLNRIQLNSQLLFISLNPPKTL*NDSTNC
Trigger: ACAGTTGGTAGAATCATTGCATAAAGTTTTGGGAGG...ATTCAGGCTGATGAAGAGCAGTTGCGAGTTCAGCTGGATACGATTCAGGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp AAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACCACCAAAGAGTCCAGTGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCC +
Preference number: 2 (lower is better)
Translates to: KTSTKSKTFVLSTTKESSAECRT*SCRCCP
Trigger: GGGACAACATCTACAACTGCAGGTTCTGCATTCAGC...ACTGGACTCTTTGGTGGTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513352.1
3UTR-3UTR CCA 90 bp GAACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAATTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCT +
Preference number: 2 (lower is better)
Translates to: ELATALHQPEWHNHSSFELACSK*AYSVVA
Trigger: AGCTACAACGCTATATGCCCATTTTGAACAAGCCAA...TTCAAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAGAGCAGTTGCGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp TTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATGATGCAGTAAGAAGATaGATTTCACAAACCTTTACA +
Preference number: 2 (lower is better)
Translates to: FTLNRIQLNSQLLFISLNDAVRR*ISQTFT
Trigger: TGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATC...ATTCAGGCTGATGAAGAGCAGTTGCGAGTTCAGCTGGATACGATTCAGGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp GAACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAATTCTGTCTAGTTTGCTaGTGCTGCTGTGTATTAAAT +
Preference number: 2 (lower is better)
Translates to: ELATALHQPEWHNHSSFEFCLVC*CCCVLN
Trigger: ATTTAATACACAGCAGCAGCAGCAAACTAGACAGAA...TTCAAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAGAGCAGTTGCGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502850.5
3UTR-3UTR TCA 90 bp AGGGTTACACCAAGTTGCTGCAATTGTGTTTTTATATTGGCTTGTTCAAAATGGAGCTGGAACTCTTCTTaGAGTACCATTTGGCGAACG +
Preference number: 2 (lower is better)
Translates to: RVTPSCCNCVFILACSKWSWNSS*STIWRT
Trigger: CGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCT...CCATTTTGAACAAGCCAATATAAAAACACAATTGCAGCAACTTGGTGTAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp GAACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAAAGGGTTACACCAAGTTaGTGCAATTGTGTTTTTATA +
Preference number: 2 (lower is better)
Translates to: ELATALHQPEWHNHSSFERVTPS*CNCVFI
Trigger: TATAAAAACACAATTGCAGCAACTTGGTGTAACCCT...TTCAAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAGAGCAGTTGCGAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR CAA 90 bp GTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTTTTATATaGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTT +
Preference number: 2 (lower is better)
Translates to: VIERVTPSCCNCVFI*ACSKWAYSVVAGTL
Trigger: AAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAATATAAAAACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp ACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCCACCATTGGTACAGGAATTAACGATGCAGTAAGAAGATaGATTTCACAAACCTTTACA +
Preference number: 2 (lower is better)
Translates to: TFSLRRSSLKPTIGTGINDAVRR*ISQTFT
Trigger: TGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATC...GTTAATTCCTGTACCAATGGTGGGTTTTAAGGAACTTCTCCGAAGACTGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp ACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCCACCATTGGTACAGGAATTAACAGGGTTACACCAAGTTaGTGCAATTGTGTTTTTATA +
Preference number: 2 (lower is better)
Translates to: TFSLRRSSLKPTIGTGINRVTPS*CNCVFI
Trigger: TATAAAAACACAATTGCAGCAACTTGGTGTAACCCT...GTTAATTCCTGTACCAATGGTGGGTTTTAAGGAACTTCTCCGAAGACTGAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR TCA 90 bp TTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGTTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCAT +
Preference number: 2 (lower is better)
Translates to: FNDANQMAKAFLLLFQMLFLRKV*CSKKMH
Trigger: ATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAA...CAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000507257.5
3UTR-3UTR TCA 90 bp TTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCGCTACAGATGTAGTTTaGTTCTTTTGTAGCTCACTA +
Preference number: 2 (lower is better)
Translates to: LMMLIKWLRPSCCCFKCCATDVV*FFCSSL
Trigger: TAGTGAGCTACAAAAGAATCAAACTACATCTGTAGC...GCAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000512151.5
3UTR-3UTR TCA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCACCTTTCTTCAGATCTaGCTGCTCCAAAATGATTCT +
Preference number: 2 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCTFLQI*LLQNDS
Trigger: AGAATCATTTTGGAGCAGTCAGATCTGAAGAAAGGT...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR TCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTACCTTTCTTCAGATCTaGCTGCTCCAAAATGATTCT +
Preference number: 2 (lower is better)
Translates to: AVRRCISQTFTQVCELSTTFLQI*LLQNDS
Trigger: AGAATCATTTTGGAGCAGTCAGATCTGAAGAAAGGT...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR TCA 90 bp TTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGGTTTCAAATGCTGCTTaGTTTCTCGTAACAGATCTG +
Preference number: 2 (lower is better)
Translates to: FNDANQMAKAFLLLFQMLVSNAA*FLVTDL
Trigger: CAGATCTGTTACGAGAAATCAAGCAGCATTTGAAAC...CAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp TTGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTAAGGGTTACACCAAGTTaGTGCAATTGTGTTTTTATA +
Preference number: 2 (lower is better)
Translates to: LACSKWAYSVVAGTLLEVRVTPS*CNCVFI
Trigger: TATAAAAACACAATTGCAGCAACTTGGTGTAACCCT...TACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CCA 90 bp AGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTCTGTCTGATCATCTaGCAATGTTTTAGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: RFSLKSCEVTISDLMNSNFCLII*QCFSAL
Trigger: GAGGGCACTAAAACATTGCCAGATGATCAGACAGAA...ATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507257.5
3UTR-3UTR TCA 90 bp AGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCAT +
Preference number: 2 (lower is better)
Translates to: RFSLKSCEVTISDLMNSNFLRKV*CSKKMH
Trigger: ATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAA...ATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
3UTR-3UTR TCA 90 bp ATTTCATATTTACTTGGTATGGAAAGCAGAGTACAGGCTCAATGGACAATAATCTTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCAT +
Preference number: 2 (lower is better)
Translates to: ISYLLGMESRVQAQWTIIFLRKV*CSKKMH
Trigger: ATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAA...GATTATTGTCCATTGAGCCTGTACTCTGCTTTCCATACCAAGTAAATATGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
3UTR-3UTR CCA 90 bp TTCAATCCATGTTCGACCAGCTTTATATCTTCTAGATCGTCTTTAATGATGCTACATATTTACTTGGTATaGAAAGCAGAGTACAGGCTC +
Preference number: 2 (lower is better)
Translates to: FNPCSTSFISSRSSLMMLHIYLV*KAEYRL
Trigger: GAGCCTGTACTCTGCTTTCCATACCAAGTAAATATG...TAGCATCATTAAAGACGATCTAGAAGATATAAAGCTGGTCGAACATGGATTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507257.5
3UTR-3UTR CCA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTTTACAGTAAGGGTCTaGTTTCCTCCCAAAACTTTA +
Preference number: 2 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCFTVRV*FPPKTL
Trigger: TAAAGTTTTGGGAGGAAACCAGACCCTTACTGTAAA...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTGATGCAGTAAGAAGATaGATTTCACAAACCTTTACA +
Preference number: 2 (lower is better)
Translates to: KELFSFSLHVVGFILKEGDAVRR*ISQTFT
Trigger: TGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATC...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
3UTR-3UTR GCA 90 bp TTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGTTTCCTCTTGTATTGTaGAATTTTGGCTACAGATGT +
Preference number: 2 (lower is better)
Translates to: FNDANQMAKAFLLLFQMLFPLVL*NFGYRC
Trigger: ACATCTGTAGCCAAAATTGCACAATACAAGAGGAAA...CAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000512151.5
3UTR-3UTR GCA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACGATGCAGTAAGAAGATaGATTTCACAAACCTTTACA +
Preference number: 2 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNDAVRR*ISQTFT
Trigger: TGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATC...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
3UTR-3UTR CCA 90 bp TTCAATCCATGTTCGACCAGCTTTATATCTTCTAGATCGTCTTTAATGATGCTAAGAGTACAGGCTCAATaGACAATAATCATTAAACAC +
Preference number: 2 (lower is better)
Translates to: FNPCSTSFISSRSSLMMLRVQAQ*TIIIKH
Trigger: GTGTTTAATGATTATTGTCCATTGAGCCTGTACTCT...TAGCATCATTAAAGACGATCTAGAAGATATAAAGCTGGTCGAACATGGATTGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507257.5
3UTR-3UTR CAA 90 bp TTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATTACCAACTGTTGTTGTaGGCTTCGAATCTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: FTLNRIQLNSQLLFISLNYQLLL*ASNLCF
Trigger: GAAACAGAGATTCGAAGCCAACAACAACAGTTGGTA...ATTCAGGCTGATGAAGAGCAGTTGCGAGTTCAGCTGGATACGATTCAGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
3UTR TCA 72 bp GTGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTaGGTACCACCAAAGAGTCCAGTAGTGCCTGTGTTA +
Preference number: 3 (lower is better)
Translates to: VPKPVPNPKPLF*VPPKSPVVPVL
Trigger: TAACACAGGCACTACTGGACTCTTTGGTGGTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTTGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513352.1
3UTR TCA 72 bp CCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCATTTCACAAACCTTTAC +
Preference number: 3 (lower is better)
Translates to: PSMWSVSFLRKV*CSKKMHFTNLY
Trigger: GTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
3UTR-3UTR CAA 90 bp GAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTTTCTTGAAGTACCATTaGGCGAACGCTCAACAACAT +
Preference number: 3 (lower is better)
Translates to: ESSVLVIERVTPSCCNCVFLKYH*ANAQQH
Trigger: ATGTTGTTGAGCGTTCGCCAAATGGTACTTCAAGAA...AACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CAA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTCAGGGTTATCTACCTaGGCCTGTTCCCAGATAATA +
Preference number: 3 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCSGLST*ACSQII
Trigger: TATTATCTGGGAACAGGCCAAGGTAGATAACCCTGA...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CAA 90 bp TTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCTTAGTCATCTGATCTaGAACCTTCAGTCTTCGGAG +
Preference number: 3 (lower is better)
Translates to: FNDANQMAKAFLLLFQMLLSHLI*NLQSSE
Trigger: CTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAG...CAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CAA 90 bp GAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTTACCAACTGTTGTTGTaGGCTTCGAATCTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: ESSVLVIERVTPSCCNCVYQLLL*ASNLCF
Trigger: GAAACAGAGATTCGAAGCCAACAACAACAGTTGGTA...AACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CAA 90 bp AGTACCATTTGGCGAACGCTCAACAACATAAATAACAACTTCTGTCTGATCATCTTCTACCAACTGTTGTaGTTGGCTTCGAATCTCTGT +
Preference number: 3 (lower is better)
Translates to: STIWRTLNNINNNFCLIIFYQLL*LASNLC
Trigger: ACAGAGATTCGAAGCCAACAACAACAGTTGGTAGAA...GATGATCAGACAGAAGTTGTTATTTATGTTGTTGAGCGTTCGCCAAATGGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CAA 90 bp TTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGTTCTGTAAAAGCTGTTaGATCTGTGCAGGAGAAAGT +
Preference number: 3 (lower is better)
Translates to: FNDANQMAKAFLLLFQMLFCKSC*ICAGES
Trigger: ACTTTCTCCTGCACAGATCAAACAGCTTTTACAGAA...CAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CAA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACTTCTACCAACTGTTGTaGTTGGCTTCGAATCTCTGT +
Preference number: 3 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNFYQLL*LASNLC
Trigger: ACAGAGATTCGAAGCCAACAACAACAGTTGGTAGAA...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507257.5
3UTR CCA 72 bp TGCTGCAATTGTGTTTTTATATTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAA +
Preference number: 3 (lower is better)
Translates to: CCNCVFILACSK*AYSVVAGTLLE
Trigger: TTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAATATAAAAACACAATTGCAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR CCA 72 bp ATATCTTCTAGATCGTCTTTAATGATGCTAATCAAATaGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGC +
Preference number: 3 (lower is better)
Translates to: ISSRSSLMMLIK*LRPSCCCFKCC
Trigger: GCAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGACGATCTAGAAGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR-3UTR CAA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTTGTTTCAAATGCTGCTaGATTTCTCGTAACAGATCT +
Preference number: 3 (lower is better)
Translates to: AVRRCISQTFTQVCELSTCFKCC*ISRNRS
Trigger: AGATCTGTTACGAGAAATCAAGCAGCATTTGAAACA...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
3UTR GCA 72 bp AGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTaGTGCAATTGTGTTTTTATATTGGCTTGTTCAAAA +
Preference number: 3 (lower is better)
Translates to: SSVLVIERVTPS*CNCVFILACSK
Trigger: TTTTGAACAAGCCAATATAAAAACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp CTGAGTACCACCAAAGAGTCCAGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTCAGCGGTACCGGAGGTaGCCGAGGGAGCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LSTTKESSSACVSWGRKAQRYRR*PREPQN
Trigger: ATTTTGGGGCTCCCTCGGGCACCTCCGGTACCGCTG...AGCTTTTCTGCCCCAACTAACACAGGCACTACTGGACTCTTTGGTGGTACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR GCA 90 bp TTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATCAGCGGTACCGGAGGTaGCCGAGGGAGCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: FTLNRIQLNSQLLFISLNQRYRR*PREPQN
Trigger: ATTTTGGGGCTCCCTCGGGCACCTCCGGTACCGCTG...ATTCAGGCTGATGAAGAGCAGTTGCGAGTTCAGCTGGATACGATTCAGGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp ACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCCACCATTGGTACAGGAATTAACCAGCGGTACCGGAGGTaGCCGAGGGAGCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TFSLRRSSLKPTIGTGINQRYRR*PREPQN
Trigger: ATTTTGGGGCTCCCTCGGGCACCTCCGGTACCGCTG...GTTAATTCCTGTACCAATGGTGGGTTTTAAGGAACTTCTCCGAAGACTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp CGTTGTTGTGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACCACCCACTGGCGGTGGAGTTaGCAGTCTCAAGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: RCCAKTSTKSKTFVLSTTHWRWS*QSQAHQ
Trigger: TTGGTGGGCTTGAGACTGCCAACTCCACCGCCAGTG...GGTGGTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTTGGCACAACAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR TCA 90 bp TGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACCACCAAAGAGTCAGGGAGCCCCAAAATTaGAGGCCATGTCGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: CQNQYQIQNLCSEYHQRVREPQN*RPCRES
Trigger: GCTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCT...GACTCTTTGGTGGTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR TCA 90 bp GCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCTCATTGGGGCAGAAAAGCTaGATGCAGAACCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: AYSVVAGTLLEVPFGERSLGQKS*MQNLQL
Trigger: CAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAA...TGAGCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp TTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATAGTCGGCCCTTGAACTaGGTAGGTGCATTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: FTLNRIQLNSQLLFISLNSRPLN*VGAFSS
Trigger: TGAACTAAATGCACCTACTCAGTTCAAGGGCCGACT...ATTCAGGCTGATGAAGAGCAGTTGCGAGTTCAGCTGGATACGATTCAGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: WAYSVVAGTLLEVPFGERAECRT*SCRCCP
Trigger: GGGACAACATCTACAACTGCAGGTTCTGCATTCAGC...GCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGAGGGAGCCCCAAAATTaGAGGCCATGTCGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLREPQN*RPCRES
Trigger: GCTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCT...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp ATTTCATATTTACTTGGTATGGAAAGCAGAGTACAGGCTCAATGGACAATAATCCAGCGGTACCGGAGGTaGCCGAGGGAGCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ISYLLGMESRVQAQWTIIQRYRR*PREPQN
Trigger: ATTTTGGGGCTCCCTCGGGCACCTCCGGTACCGCTG...GATTATTGTCCATTGAGCCTGTACTCTGCTTTCCATACCAAGTAAATATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
CDS-3UTR GCA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACCAGCGGTACCGGAGGTaGCCGAGGGAGCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNQRYRR*PREPQN
Trigger: ATTTTGGGGCTCCCTCGGGCACCTCCGGTACCGCTG...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR GCA 90 bp GAACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAAGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ELATALHQPEWHNHSSFEAECRT*SCRCCP
Trigger: GGGACAACATCTACAACTGCAGGTTCTGCATTCAGC...TTCAAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAGAGCAGTTGCGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGATCTCCCAACAGCGTTaGAGCAGAAAGAGCACTCGC +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQISQQR*SRKSTR
Trigger: GCGAGTGCTCTTTCTGCTCCAACGCTGTTGGGAGAT...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR TCA 90 bp AACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAATAGCTGGAACTCTTCTTaGAGTACCATTTGGCGAACG +
Preference number: 4 (lower is better)
Translates to: NSQLLFISLNGITTLPLNSWNSS*STIWRT
Trigger: CGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCT...ATTCAAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAGAGCAGTTGCGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp AACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAATGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: NSQLLFISLNGITTLPLNAECRT*SCRCCP
Trigger: GGGACAACATCTACAACTGCAGGTTCTGCATTCAGC...ATTCAAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAGAGCAGTTGCGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCCACTGGCGGTGGAGTTaGCAGTCTCAAGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCHWRWS*QSQAHQ
Trigger: TTGGTGGGCTTGAGACTGCCAACTCCACCGCCAGTG...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502850.5
CDS-3UTR TCA 90 bp AGGGTTACACCAAGTTGCTGCAATTGTGTTTTTATATTGGCTTGTTCAAAATGGAGGGAGCCCCAAAATTaGAGGCCATGTCGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: RVTPSCCNCVFILACSKWREPQN*RPCRES
Trigger: GCTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCT...CCATTTTGAACAAGCCAATATAAAAACACAATTGCAGCAACTTGGTGTAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAAAGGGAGCCCCAAAATTaGAGGCCATGTCGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEREPQN*RPCRES
Trigger: GCTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCT...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR TCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGTTGGGGCAGAAAAGCTaGATGCAGAACCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLLGQKS*MQNLQL
Trigger: CAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAA...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp AAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACCACCAAAGAGTCCAGTTTGGGGCAGAAAAGCTaGATGCAGAACCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KTSTKSKTFVLSTTKESSLGQKS*MQNLQL
Trigger: CAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAA...ACTGGACTCTTTGGTGGTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR TCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGAGCTGGAACTCTTCTTaGAGTACCATTTGGCGAACG +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQSWNSS*STIWRT
Trigger: CGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCT...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp TTGATGCTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTAGTCGGCCCTTGAACTaGGTAGGTGCATTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: LMLLSHLILNLQSSEKFLSRPLN*VGAFSS
Trigger: TGAACTAAATGCACCTACTCAGTTCAAGGGCCGACT...AAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAGCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp TTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATACCTTTCTTCAGATCTaGCTGCTCCAAAATGATTCT +
Preference number: 4 (lower is better)
Translates to: FTLNRIQLNSQLLFISLNTFLQI*LLQNDS
Trigger: AGAATCATTTTGGAGCAGTCAGATCTGAAGAAAGGT...ATTCAGGCTGATGAAGAGCAGTTGCGAGTTCAGCTGGATACGATTCAGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQAECRT*SCRCCP
Trigger: GGGACAACATCTACAACTGCAGGTTCTGCATTCAGC...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTCCCGTTGTTGTGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: FPLLCQNQYQIQNLCSEYAECRT*SCRCCP
Trigger: GGGACAACATCTACAACTGCAGGTTCTGCATTCAGC...GTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTTGGCACAACAACGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR GCA 90 bp TCCCGTTGTTGTGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACCGGCAGAAAAGCTGAATaGAGAACCTGCAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SRCCAKTSTKSKTFVLSTGRKAE*RTCSCR
Trigger: TCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCC...GGTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTTGGCACAACAACGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR GCA 90 bp CTGAGTACCACCAAAGAGTCCAGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTGTCAGTTTCTCATCATaGTCCACAACATCAAAAATG +
Preference number: 4 (lower is better)
Translates to: LSTTKESSSACVSWGRKAVSFSS*STTSKM
Trigger: CATTTTTGATGTTGTGGAGCATGATGAGAAACTGAC...AGCTTTTCTGCCCCAACTAACACAGGCACTACTGGACTCTTTGGTGGTACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR TCA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACAGGGAGCCCCAAAATTaGAGGCCATGTCGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNREPQN*RPCRES
Trigger: GCTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCT...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR TCA 90 bp AACTTCTGTCTGATCATCTGGCAATGTTTTAGTGCCCTCTACATTTACAGTAAGTTGGGGCAGAAAAGCTaGATGCAGAACCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: NFCLIIWQCFSALYIYSKLGQKS*MQNLQL
Trigger: CAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAA...CTTACTGTAAATGTAGAGGGCACTAAAACATTGCCAGATGATCAGACAGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTTGGGGCAGAAAAGCTaGATGCAGAACCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVLGQKS*MQNLQL
Trigger: CAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAA...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp TGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACCACCAAAGAGTCCCAAAACCTTTGTTCTaGGTACCACCAAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CQNQYQIQNLCSEYHQRVPKPLF*VPPKSP
Trigger: TGGACTCTTTGGTGGTACTCAGAACAAAGGTTTTGG...GACTCTTTGGTGGTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR TCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGAGTCGGCCCTTGAACTaGGTAGGTGCATTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLSRPLN*VGAFSS
Trigger: TGAACTAAATGCACCTACTCAGTTCAAGGGCCGACT...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMAECRT*SCRCCP
Trigger: GGGACAACATCTACAACTGCAGGTTCTGCATTCAGC...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGGGCAGAAAAGCTGAATaGAGAACCTGCAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQGRKAE*RTCSCR
Trigger: TCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCC...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp ACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCCACCATTGGTACAGGAATTAACGGCAGAAAAGCTGAATaGAGAACCTGCAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: TFSLRRSSLKPTIGTGINGRKAE*RTCSCR
Trigger: TCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCC...GTTAATTCCTGTACCAATGGTGGGTTTTAAGGAACTTCTCCGAAGACTGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCATGTGTTTCTGCACTTaGCAGACTGTTACCAAAATT +
Preference number: 4 (lower is better)
Translates to: WAYSVVAGTLLEVPFGERMCFCT*QTVTKI
Trigger: AATTTTGGTAACAGTCTGGCAAGTGCAGAAACACAT...GCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502850.5
CDS-3UTR GCA 90 bp AACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAATCTAGTTTGCTGCTGCTaGTGTGTATTAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: NSQLLFISLNGITTLPLNLVCCC*CVLNPP
Trigger: TGGAGGATTTAATACACAGCAGCAGCAGCAAACTAG...ATTCAAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAGAGCAGTTGCGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCTTCTGTCTAGTTTGCTaGTGCTGCTGTGTATTAAAT +
Preference number: 4 (lower is better)
Translates to: WAYSVVAGTLLEVPFGERFCLVC*CCCVLN
Trigger: ATTTAATACACAGCAGCAGCAGCAAACTAGACAGAA...GCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502850.5
CDS-3UTR CCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGGCAGTATTTATCAGCTaGTTGGACTGGGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLAVFIS*LDWVGA
Trigger: AGCTCCTACCCAGTCCAACCAGCTGATAAATACTGC...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTATCTCCCAACAGCGTTaGAGCAGAAAGAGCACTCGC +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGISQQR*SRKSTR
Trigger: GCGAGTGCTCTTTCTGCTCCAACGCTGTTGGGAGAT...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR TCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGCCAAAACCTTTGTTCTaGGTACCACCAAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLPKPLF*VPPKSP
Trigger: TGGACTCTTTGGTGGTACTCAGAACAAAGGTTTTGG...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR TCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTGGAGCTTGTGTAGGCTaGCTGAAGAGACCACCTAAT +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGGACVG*LKRPPN
Trigger: ATTAGGTGGTCTCTTCAGTCAGCCTACACAAGCTCC...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR TCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGAGGGATTTTCTTGTGTaGATTCCACTGGCGGAATAT +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQRDFLV*IPLAEY
Trigger: ATATTCCGCCAGTGGAATTCACACAAGAAAATCCCT...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR TCA 90 bp AGAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTAGCTGGAACTCTTCTTaGAGTACCATTTGGCGAACG +
Preference number: 4 (lower is better)
Translates to: RKFCSSHRKGYTKLLQLCSWNSS*STIWRT
Trigger: CGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCT...ACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp GCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCTCAGCTACAGATGTAGTTTaGTTCTTTTGTAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: AYSVVAGTLLEVPFGERSATDVV*FFCSSL
Trigger: TAGTGAGCTACAAAAGAATCAAACTACATCTGTAGC...TGAGCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000512151.5
CDS-3UTR TCA 90 bp AGTACCATTTGGCGAACGCTCAACAACATAAATAACAACTTCTGTCTGATCATCAGTCGGCCCTTGAACTaGGTAGGTGCATTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: STIWRTLNNINNNFCLIISRPLN*VGAFSS
Trigger: TGAACTAAATGCACCTACTCAGTTCAAGGGCCGACT...GATGATCAGACAGAAGTTGTTATTTATGTTGTTGAGCGTTCGCCAAATGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCAGTCGGCCCTTGAACTaGGTAGGTGCATTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVSRPLN*VGAFSS
Trigger: TGAACTAAATGCACCTACTCAGTTCAAGGGCCGACT...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGGGCAGAAAAGCTGAATaGAGAACCTGCAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMGRKAE*RTCSCR
Trigger: TCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCC...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGACAAGAATGTGTTTCTaGACTTGCCAGACTGTTACC +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQTRMCF*TCQTVT
Trigger: GGTAACAGTCTGGCAAGTGCAGAAACACATTCTTGT...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502850.5
CDS-3UTR GCA 90 bp TTGATGCTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTCTAGTTTGCTGCTGCTaGTGTGTATTAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LMLLSHLILNLQSSEKFLLVCCC*CVLNPP
Trigger: TGGAGGATTTAATACACAGCAGCAGCAGCAAACTAG...AAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAGCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TTGATGCTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTAACCTACTGCTAGTTTaGTGCTGCTGCTGTGTATTA +
Preference number: 4 (lower is better)
Translates to: LMLLSHLILNLQSSEKFLNLLLV*CCCCVL
Trigger: TAATACACAGCAGCAGCAGCAAACTAGCAGTAGGTT...AAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAGCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCGCAGTATTTATCAGCTaGTTGGACTGGGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVAVFIS*LDWVGA
Trigger: AGCTCCTACCCAGTCCAACCAGCTGATAAATACTGC...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CCA 90 bp GCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCTCATTTACAGTAAGGGTCTaGTTTCCTCCCAAAACTTTA +
Preference number: 4 (lower is better)
Translates to: AYSVVAGTLLEVPFGERSFTVRV*FPPKTL
Trigger: TAAAGTTTTGGGAGGAAACCAGACCCTTACTGTAAA...TGAGCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp TGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCAGAGTACAGGCTCAATaGACAATAATCATTAAACAC +
Preference number: 4 (lower is better)
Translates to: WAYSVVAGTLLEVPFGERRVQAQ*TIIIKH
Trigger: GTGTTTAATGATTATTGTCCATTGAGCCTGTACTCT...GCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507257.5
CDS-3UTR TCA 90 bp AGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGGGGCAGAAAAGCTaGATGCAGAACCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RFSLKSCEVTISDLMNSNLGQKS*MQNLQL
Trigger: CAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAA...ATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR TCA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACGGAGCTTGTGTAGGCTaGCTGAAGAGACCACCTAAT +
Preference number: 4 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNGACVG*LKRPPN
Trigger: ATTAGGTGGTCTCTTCAGTCAGCCTACACAAGCTCC...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264883.8
CDS-3UTR TCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGAGGGATTTTCTTGTGTaGATTCCACTGGCGGAATAT +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMRDFLV*IPLAEY
Trigger: ATATTCCGCCAGTGGAATTCACACAAGAAAATCCCT...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR TCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTAGCTGGAACTCTTCTTaGAGTACCATTTGGCGAACG +
Preference number: 4 (lower is better)
Translates to: AVRRCISQTFTQVCELSTSWNSS*STIWRT
Trigger: CGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCT...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAAAGCTGGAACTCTTCTTaGAGTACCATTTGGCGAACG +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCESWNSS*STIWRT
Trigger: CGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCT...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR TCA 90 bp TTGATGCTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTACCTTTCTTCAGATCTaGCTGCTCCAAAATGATTCT +
Preference number: 4 (lower is better)
Translates to: LMLLSHLILNLQSSEKFLTFLQI*LLQNDS
Trigger: AGAATCATTTTGGAGCAGTCAGATCTGAAGAAAGGT...AAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAGCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCAT +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQFLRKV*CSKKMH
Trigger: ATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGGCAACTATAACCTACTaGCTTAAATCGGCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLATITY*LKSAKG
Trigger: CCCTTTTGCCGATTTAAGGCAGTAGGTTATAGTTGC...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR GCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTGTCTAGTTTGCTGCTaGTGCTGTGTATTAAATCCT +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQCLVCC*CCVLNP
Trigger: AGGATTTAATACACAGCAGCAGCAGCAAACTAGACA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502850.5
CDS-3UTR CCA 90 bp TTGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTATTCTGTCTGATCATCTaGCAATGTTTTAGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LACSKWAYSVVAGTLLEVFCLII*QCFSAL
Trigger: GAGGGCACTAAAACATTGCCAGATGATCAGACAGAA...TACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGCTTCATCAGCCTGAATaGCATAACCACTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLLHQPE*HNHSSF
Trigger: AAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAG...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCCAAAACCTTTGTTCTaGGTACCACCAAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGPKPLF*VPPKSP
Trigger: TGGACTCTTTGGTGGTACTCAGAACAAAGGTTTTGG...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR TCA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCCCAAAACCTTTGTTCTaGGTACCACCAAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCPKPLF*VPPKSP
Trigger: TGGACTCTTTGGTGGTACTCAGAACAAAGGTTTTGG...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGACCTTTCTTCAGATCTaGCTGCTCCAAAATGATTCT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLTFLQI*LLQNDS
Trigger: AGAATCATTTTGGAGCAGTCAGATCTGAAGAAAGGT...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp TTGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTAACCTTTCTTCAGATCTaGCTGCTCCAAAATGATTCT +
Preference number: 4 (lower is better)
Translates to: LACSKWAYSVVAGTLLEVTFLQI*LLQNDS
Trigger: AGAATCATTTTGGAGCAGTCAGATCTGAAGAAAGGT...TACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGGTTTCAAATGCTGCTTaGTTTCTCGTAACAGATCTG +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMVSNAA*FLVTDL
Trigger: CAGATCTGTTACGAGAAATCAAGCAGCATTTGAAAC...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCAT +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMFLRKV*CSKKMH
Trigger: ATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTTCTTTGAAGAGCTGTaGGGTGACTATTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQFFEEL*GDYFRF
Trigger: AAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR GCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTGGCAGAAAAGCTGAATaGAGAACCTGCAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGGRKAE*RTCSCR
Trigger: TCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCC...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTGGCAGAAAAGCTGAATaGAGAACCTGCAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: AVRRCISQTFTQVCELSTGRKAE*RTCSCR
Trigger: TCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCC...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGCTTTATTACTGGGCATaGAACTATAACCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLLYYWA*NYNLLP
Trigger: AGGCAGTAGGTTATAGTTGCATGCCCAGTAATAAAG...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR GCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCTTTATTACTGGGCATaGAACTATAACCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMLYYWA*NYNLLP
Trigger: AGGCAGTAGGTTATAGTTGCATGCCCAGTAATAAAG...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGACCAACTGTTGTTGTTaGCTTCGAATCTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLTNCCC*LRISVS
Trigger: AGAAACAGAGATTCGAAGCCAACAACAACAGTTGGT...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGACCAACTGTTGTTGTTaGCTTCGAATCTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMTNCCC*LRISVS
Trigger: AGAAACAGAGATTCGAAGCCAACAACAACAGTTGGT...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTTCTGTCTGATCATCTaGCAATGTTTTAGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVFCLII*QCFSAL
Trigger: GAGGGCACTAAAACATTGCCAGATGATCAGACAGAA...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMLACSK*AYSVVA
Trigger: AGCTACAACGCTATATGCCCATTTTGAACAAGCCAA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp TTGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTATTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LACSKWAYSVVAGTLLEVLACSK*AYSVVA
Trigger: AGCTACAACGCTATATGCCCATTTTGAACAAGCCAA...TACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGTTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLLACSK*AYSVVA
Trigger: AGCTACAACGCTATATGCCCATTTTGAACAAGCCAA...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp AGTACCATTTGGCGAACGCTCAACAACATAAATAACAACTTCTGTCTGATCATCCTTCATCAGCCTGAATaGCATAACCACTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: STIWRTLNNINNNFCLIILHQPE*HNHSSF
Trigger: AAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAG...GATGATCAGACAGAAGTTGTTATTTATGTTGTTGAGCGTTCGCCAAATGGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp TTGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTAATGATGCTAATCAAATaGCTAAGGCCTTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LACSKWAYSVVAGTLLEVMMLIK*LRPSCC
Trigger: ACAACAGGAAGGCCTTAGCCATTTGATTAGCATCAT...TACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGATGCTAATCAAATaGCTAAGGCCTTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLMMLIK*LRPSCC
Trigger: ACAACAGGAAGGCCTTAGCCATTTGATTAGCATCAT...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCATATTTACTTGGTATaGAAAGCAGAGTACAGGCTC +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMHIYLV*KAEYRL
Trigger: GAGCCTGTACTCTGCTTTCCATACCAAGTAAATATG...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
CDS-3UTR TCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGGCTACAGATGTAGTTTaGTTCTTTTGTAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMATDVV*FFCSSL
Trigger: TAGTGAGCTACAAAAGAATCAAACTACATCTGTAGC...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000514987.5
CDS-3UTR TCA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCACCTTTCTTCAGATCTaGCTGCTCCAAAATGATTCT +
Preference number: 4 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVTFLQI*LLQNDS
Trigger: AGAATCATTTTGGAGCAGTCAGATCTGAAGAAAGGT...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp AGTACCATTTGGCGAACGCTCAACAACATAAATAACAACTTCTGTCTGATCATCTTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCAT +
Preference number: 4 (lower is better)
Translates to: STIWRTLNNINNNFCLIIFLRKV*CSKKMH
Trigger: ATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAA...GATGATCAGACAGAAGTTGTTATTTATGTTGTTGAGCGTTCGCCAAATGGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507257.5
CDS-3UTR GCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAAGCAACTATAACCTACTaGCTTAAATCGGCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEATITY*LKSAKG
Trigger: CCCTTTTGCCGATTTAAGGCAGTAGGTTATAGTTGC...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR GCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCCTCCCAAAACTTTATaGAATGATTCTACCAACTGT +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMPPKTL*NDSTNC
Trigger: ACAGTTGGTAGAATCATTGCATAAAGTTTTGGGAGG...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTGATGCTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTTTTCCTCTTGTATTGTaGAATTTTGGCTACAGATGT +
Preference number: 4 (lower is better)
Translates to: LMLLSHLILNLQSSEKFLFPLVL*NFGYRC
Trigger: ACATCTGTAGCCAAAATTGCACAATACAAGAGGAAA...AAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAGCATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000512151.5
CDS-3UTR GCA 90 bp CTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCTTTCCTCTTGTATTGTaGAATTTTGGCTACAGATGT +
Preference number: 4 (lower is better)
Translates to: LLSHLILNLQSSEKFLKTFPLVL*NFGYRC
Trigger: ACATCTGTAGCCAAAATTGCACAATACAAGAGGAAA...GGTTTTAAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTTCTTCAGATCTGACTaGTCCAAAATGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMFFRSD*SKMILH
Trigger: ATGCAGAATCATTTTGGAGCAGTCAGATCTGAAGAA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGTTCTTCAGATCTGACTaGTCCAAAATGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLFFRSD*SKMILH
Trigger: ATGCAGAATCATTTTGGAGCAGTCAGATCTGAAGAA...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTGATGCTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTTGTTGTTTCAAATGCTaGTTGATTTCTCGTAACAGA +
Preference number: 4 (lower is better)
Translates to: LMLLSHLILNLQSSEKFLCCFKC*LISRNR
Trigger: TCTGTTACGAGAAATCAAGCAGCATTTGAAACAACA...AAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAGCATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTGTTGTTTCAAATGCTaGTTGATTTCTCGTAACAGA +
Preference number: 4 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQCCFKC*LISRNR
Trigger: TCTGTTACGAGAAATCAAGCAGCATTTGAAACAACA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp CTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCGATGCAGTAAGAAGATaGATTTCACAAACCTTTACA +
Preference number: 4 (lower is better)
Translates to: LLSHLILNLQSSEKFLKTDAVRR*ISQTFT
Trigger: TGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATC...GGTTTTAAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTAGTTTGCTGCTGCTaGTGTGTATTAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCELVCCC*CVLNPP
Trigger: TGGAGGATTTAATACACAGCAGCAGCAGCAAACTAG...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCTGCTAGTTTGCTGCTaGTGCTGTGTATTAAATCCT +
Preference number: 4 (lower is better)
Translates to: FNDANQMAKAFLLLFQMLLLVCC*CCVLNP
Trigger: AGGATTTAATACACAGCAGCAGCAGCAAACTAGCAG...CAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTCTGCTAGTTTGCTGCTaGTGCTGTGTATTAAATCCT +
Preference number: 4 (lower is better)
Translates to: AVRRCISQTFTQVCELSTLLVCC*CCVLNP
Trigger: AGGATTTAATACACAGCAGCAGCAGCAAACTAGCAG...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTAACCTACTGCTAGTTTaGTGCTGCTGCTGTGTATTA +
Preference number: 4 (lower is better)
Translates to: AVRRCISQTFTQVCELSTNLLLV*CCCCVL
Trigger: TAATACACAGCAGCAGCAGCAAACTAGCAGTAGGTT...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TTGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACTTTATTACTGGGCATaGAACTATAACCTACTGCTA +
Preference number: 4 (lower is better)
Translates to: LACSKWAYSVVAGTLLEVLYYWA*NYNLLL
Trigger: TAGCAGTAGGTTATAGTTGCATGCCCAGTAATAAAG...TACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp TTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCACCAACTGTTGTTGTTaGCTTCGAATCTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LMMLIKWLRPSCCCFKCCTNCCC*LRISVS
Trigger: AGAAACAGAGATTCGAAGCCAACAACAACAGTTGGT...GCAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGTTTACAGTAAGGGTCTaGTTTCCTCCCAAAACTTTA +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLFTVRV*FPPKTL
Trigger: TAAAGTTTTGGGAGGAAACCAGACCCTTACTGTAAA...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTTTCTGTCTGATCATCTaGCAATGTTTTAGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGFCLII*QCFSAL
Trigger: GAGGGCACTAAAACATTGCCAGATGATCAGACAGAA...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTTCATCAGCCTGAATaGCATAACCACTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGLHQPE*HNHSSF
Trigger: AAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAG...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTCTTCATCAGCCTGAATaGCATAACCACTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AVRRCISQTFTQVCELSTLHQPE*HNHSSF
Trigger: AAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAG...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCCTTCATCAGCCTGAATaGCATAACCACTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCLHQPE*HNHSSF
Trigger: AAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAG...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp GAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTATGATGCTAATCAAATaGCTAAGGCCTTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ESSVLVIERVTPSCCNCVMMLIK*LRPSCC
Trigger: ACAACAGGAAGGCCTTAGCCATTTGATTAGCATCAT...AACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTGTTTCAAATGCTGCTTaGTTTCTCGTAACAGATCTG +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGVSNAA*FLVTDL
Trigger: CAGATCTGTTACGAGAAATCAAGCAGCATTTGAAAC...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR TCA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCGTTTCAAATGCTGCTTaGTTTCTCGTAACAGATCTG +
Preference number: 4 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCVSNAA*FLVTDL
Trigger: CAGATCTGTTACGAGAAATCAAGCAGCATTTGAAAC...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR TCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTTTCTTAAGGAAGGTCTaGTGCAGTAAGAAGATGCAT +
Preference number: 4 (lower is better)
Translates to: AVRRCISQTFTQVCELSTFLRKV*CSKKMH
Trigger: ATGCATCTTCTTACTGCATCAGACCTTCCTTAAGAA...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000507257.5
CDS-3UTR TCA 90 bp GAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTTTCTTTGAAGAGCTGTaGGGTGACTATTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: ESSVLVIERVTPSCCNCVFFEEL*GDYFRF
Trigger: AAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAA...AACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000507257.5
CDS-3UTR TCA 90 bp AACTTCTGTCTGATCATCTGGCAATGTTTTAGTGCCCTCTACATTTACAGTAAGTTCTTTGAAGAGCTGTaGGGTGACTATTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: NFCLIIWQCFSALYIYSKFFEEL*GDYFRF
Trigger: AAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAA...CTTACTGTAAATGTAGAGGGCACTAAAACATTGCCAGATGATCAGACAGAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507257.5
CDS-3UTR GCA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACGTAGTTTGCTGCTGCTaGTGTGTATTAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNVVCCC*CVLNPP
Trigger: TGGAGGATTTAATACACAGCAGCAGCAGCAAACTAC...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264883.8
CDS-3UTR GCA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCAATGTAGTTTGCTGCTaGTGCTGTGTATTAAATCCT +
Preference number: 4 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVNVVCC*CCVLNP
Trigger: AGGATTTAATACACAGCAGCAGCAGCAAACTACATT...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264883.8
CDS-3UTR GCA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACCCACCTAATGTAGTTTaGTGCTGCTGCTGTGTATTA +
Preference number: 4 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNPPNVV*CCCCVL
Trigger: TAATACACAGCAGCAGCAGCAAACTACATTAGGTGG...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264883.8
CDS-3UTR GCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGAGGGTTACACCAAGTTaGTGCAATTGTGTTTTTATA +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMRVTPS*CNCVFI
Trigger: TATAAAAACACAATTGCAGCAACTTGGTGTAACCCT...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGTTTCCTCTTGTATTGTaGAATTTTGGCTACAGATGT +
Preference number: 4 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLFPLVL*NFGYRC
Trigger: ACATCTGTAGCCAAAATTGCACAATACAAGAGGAAA...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000514987.5
CDS-3UTR GCA 90 bp AGAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTTCTTCAGATCTGACTaGTCCAAAATGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RKFCSSHRKGYTKLLQLCFFRSD*SKMILH
Trigger: ATGCAGAATCATTTTGGAGCAGTCAGATCTGAAGAA...ACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTGTTGTTTCAAATGCTaGTTGATTTCTCGTAACAGA +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMCCFKC*LISRNR
Trigger: TCTGTTACGAGAAATCAAGCAGCATTTGAAACAACA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGGATGCAGTAAGAAGATaGATTTCACAAACCTTTACA +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMDAVRR*ISQTFT
Trigger: TGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATC...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTCTACTGCTAGTTTGCTaGTGCTGCTGTGTATTAAAT +
Preference number: 4 (lower is better)
Translates to: AVRRCISQTFTQVCELSTLLLVC*CCCVLN
Trigger: ATTTAATACACAGCAGCAGCAGCAAACTAGCAGTAG...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp AGAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTCTTTATTACTGGGCATaGAACTATAACCTACTGCTA +
Preference number: 4 (lower is better)
Translates to: RKFCSSHRKGYTKLLQLCLYYWA*NYNLLL
Trigger: TAGCAGTAGGTTATAGTTGCATGCCCAGTAATAAAG...ACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTTGTGTGAATTCCACTaGCGGAATATTATTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMLCEFH*RNIIVE
Trigger: TTCAACAATAATATTCCGCCAGTGGAATTCACACAA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CCA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCTTCATCTTTATTACTaGGCATGCAACTATAACCTA +
Preference number: 4 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMLHLYY*ACNYNL
Trigger: TAGGTTATAGTTGCATGCCCAGTAATAAAGATGAAG...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTTTACAGTAAGGGTCTaGTTTCCTCCCAAAACTTTA +
Preference number: 4 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVFTVRV*FPPKTL
Trigger: TAAAGTTTTGGGAGGAAACCAGACCCTTACTGTAAA...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCLACSK*AYSVVA
Trigger: AGCTACAACGCTATATGCCCATTTTGAACAAGCCAA...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTATGATGCTAATCAAATaGCTAAGGCCTTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGMMLIK*LRPSCC
Trigger: ACAACAGGAAGGCCTTAGCCATTTGATTAGCATCAT...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTCATATTTACTTGGTATaGAAAGCAGAGTACAGGCTC +
Preference number: 4 (lower is better)
Translates to: AVRRCISQTFTQVCELSTHIYLV*KAEYRL
Trigger: GAGCCTGTACTCTGCTTTCCATACCAAGTAAATATG...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507257.5
CDS-3UTR TCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAAGCGGAATATTATTGTTaGAATACCCTTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEAEYYC*NTLFLF
Trigger: GAACAGGAAAAGGGTATTTCAACAATAATATTCCGC...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR TCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTGCTACAGATGTAGTTTaGTTCTTTTGTAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGATDVV*FFCSSL
Trigger: TAGTGAGCTACAAAAGAATCAAACTACATCTGTAGC...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000514987.5
CDS-3UTR GCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACCTAATGTAGTTTGCTaGTGCTGCTGTGTATTAAAT +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEPNVVC*CCCVLN
Trigger: ATTTAATACACAGCAGCAGCAGCAAACTACATTAGG...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264883.8
CDS-3UTR GCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCAGTTGATTCCATTTTaGCAAAATAGCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGQLIPF*QNSISL
Trigger: GAGAGAGATGCTATTTTGGCAAAATGGAATCAACTG...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR GCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCCTCCCAAAACTTTATaGAATGATTCTACCAACTGT +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGPPKTL*NDSTNC
Trigger: ACAGTTGGTAGAATCATTGCATAAAGTTTTGGGAGG...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTTTCTTCAGATCTGACTaGTCCAAAATGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGFFRSD*SKMILH
Trigger: ATGCAGAATCATTTTGGAGCAGTCAGATCTGAAGAA...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR GCA 90 bp TTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCTGTTGTTTCAAATGCTaGTTGATTTCTCGTAACAGA +
Preference number: 4 (lower is better)
Translates to: LMMLIKWLRPSCCCFKCCCCFKC*LISRNR
Trigger: TCTGTTACGAGAAATCAAGCAGCATTTGAAACAACA...GCAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp AGAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTGTTGTTTCAAATGCTaGTTGATTTCTCGTAACAGA +
Preference number: 4 (lower is better)
Translates to: RKFCSSHRKGYTKLLQLCCCFKC*LISRNR
Trigger: TCTGTTACGAGAAATCAAGCAGCATTTGAAACAACA...ACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp TTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCGATGCAGTAAGAAGATaGATTTCACAAACCTTTACA +
Preference number: 4 (lower is better)
Translates to: LMMLIKWLRPSCCCFKCCDAVRR*ISQTFT
Trigger: TGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATC...GCAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACCTACTGCTAGTTTGCTaGTGCTGCTGTGTATTAAAT +
Preference number: 4 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNLLLVC*CCCVLN
Trigger: ATTTAATACACAGCAGCAGCAGCAAACTAGCAGTAG...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507257.5
CDS-3UTR CCA 90 bp TTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCCTTCATCTTTATTACTaGGCATGCAACTATAACCTA +
Preference number: 4 (lower is better)
Translates to: LMMLIKWLRPSCCCFKCCLHLYY*ACNYNL
Trigger: TAGGTTATAGTTGCATGCCCAGTAATAAAGATGAAG...GCAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp AGAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTCTTCATCTTTATTACTaGGCATGCAACTATAACCTA +
Preference number: 4 (lower is better)
Translates to: RKFCSSHRKGYTKLLQLCLHLYY*ACNYNL
Trigger: TAGGTTATAGTTGCATGCCCAGTAATAAAGATGAAG...ACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp AGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATACCAACTGTTGTTGTTaGCTTCGAATCTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RFSLKSCEVTISDLMNSNTNCCC*LRISVS
Trigger: AGAAACAGAGATTCGAAGCCAACAACAACAGTTGGT...ATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
CDS-3UTR CCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTTTTACAGTAAGGGTCTaGTTTCCTCCCAAAACTTTA +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGFTVRV*FPPKTL
Trigger: TAAAGTTTTGGGAGGAAACCAGACCCTTACTGTAAA...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp TTCAATCCATGTTCGACCAGCTTTATATCTTCTAGATCGTCTTTAATGATGCTATTGGCTTGTTCAAAATaGGCATATAGCGTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: FNPCSTSFISSRSSLMMLLACSK*AYSVVA
Trigger: AGCTACAACGCTATATGCCCATTTTGAACAAGCCAA...TAGCATCATTAAAGACGATCTAGAAGATATAAAGCTGGTCGAACATGGATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CCA 90 bp ATTTCATATTTACTTGGTATGGAAAGCAGAGTACAGGCTCAATGGACAATAATCATGATGCTAATCAAATaGCTAAGGCCTTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ISYLLGMESRVQAQWTIIMMLIK*LRPSCC
Trigger: ACAACAGGAAGGCCTTAGCCATTTGATTAGCATCAT...GATTATTGTCCATTGAGCCTGTACTCTGCTTTCCATACCAAGTAAATATGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
CDS-3UTR TCA 90 bp AGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATGCGGAATATTATTGTTaGAATACCCTTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: RFSLKSCEVTISDLMNSNAEYYC*NTLFLF
Trigger: GAACAGGAAAAGGGTATTTCAACAATAATATTCCGC...ATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAAAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264883.8
CDS-3UTR TCA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACGCTACAGATGTAGTTTaGTTCTTTTGTAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNATDVV*FFCSSL
Trigger: TAGTGAGCTACAAAAGAATCAAACTACATCTGTAGC...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000502850.5
CDS-3UTR GCA 90 bp AGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATCAGTTGATTCCATTTTaGCAAAATAGCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RFSLKSCEVTISDLMNSNQLIPF*QNSISL
Trigger: GAGAGAGATGCTATTTTGGCAAAATGGAATCAACTG...ATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAAAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264883.8
CDS-3UTR GCA 90 bp AGGGTTACACCAAGTTGCTGCAATTGTGTTTTTATATTGGCTTGTTCAAAATGGAGGGTTACACCAAGTTaGTGCAATTGTGTTTTTATA +
Preference number: 4 (lower is better)
Translates to: RVTPSCCNCVFILACSKWRVTPS*CNCVFI
Trigger: TATAAAAACACAATTGCAGCAACTTGGTGTAACCCT...CCATTTTGAACAAGCCAATATAAAAACACAATTGCAGCAACTTGGTGTAACCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR GCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAAAGGGTTACACCAAGTTaGTGCAATTGTGTTTTTATA +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCERVTPS*CNCVFI
Trigger: TATAAAAACACAATTGCAGCAACTTGGTGTAACCCT...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR GCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAATTTCCTCTTGTATTGTaGAATTTTGGCTACAGATGT +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEFPLVL*NFGYRC
Trigger: ACATCTGTAGCCAAAATTGCACAATACAAGAGGAAA...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR GCA 90 bp ATTTCATATTTACTTGGTATGGAAAGCAGAGTACAGGCTCAATGGACAATAATCTTCTTCAGATCTGACTaGTCCAAAATGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ISYLLGMESRVQAQWTIIFFRSD*SKMILH
Trigger: ATGCAGAATCATTTTGGAGCAGTCAGATCTGAAGAA...GATTATTGTCCATTGAGCCTGTACTCTGCTTTCCATACCAAGTAAATATGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
CDS-3UTR GCA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAAGATGCAGTAAGAAGATaGATTTCACAAACCTTTACA +
Preference number: 4 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEDAVRR*ISQTFT
Trigger: TGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATC...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR CCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTTCATCTTTATTACTaGGCATGCAACTATAACCTA +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGLHLYY*ACNYNL
Trigger: TAGGTTATAGTTGCATGCCCAGTAATAAAGATGAAG...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CCA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTAGAGTACAGGCTCAATaGACAATAATCATTAAACAC +
Preference number: 4 (lower is better)
Translates to: KELFSFSLHVVGFILKEGRVQAQ*TIIIKH
Trigger: GTGTTTAATGATTATTGTCCATTGAGCCTGTACTCT...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
CDS-3UTR CAA 90 bp GTTCTGAGTACCACCAAAGAGTCCAGTAGTGCCTGTGTTAGTTGGGGCAGAAAACCACTGGCGGTGGAGTaGGCAGTCTCAAGCCCACCA +
Preference number: 5 (lower is better)
Translates to: VLSTTKESSSACVSWGRKPLAVE*AVSSPP
Trigger: TGGTGGGCTTGAGACTGCCAACTCCACCGCCAGTGG...TTTTCTGCCCCAACTAACACAGGCACTACTGGACTCTTTGGTGGTACTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS GCA 90 bp AGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCCAAATCCTCCAAACCCACCCGCGGG +
Preference number: 5 (lower is better)
Translates to: SSACVSWGRKAECRT*SCRCCPKSSKPTRG
Trigger: CCCGCGGGTGGGTTTGGAGGATTTGGGACAACATCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAACTAACACAGGCACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS GCA 90 bp AGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCCAAATCCTCCAAACCCACGCGCGGC +
Preference number: 5 (lower is better)
Translates to: SSACVSWGRKAECRT*SCRCCPKSSKPTRG
Trigger: GCCGCGCGTGGGTTTGGAGGATTTGGGACAACATCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAACTAACACAGGCACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514307.5
CDS TCA 90 bp GCAGTATTTATCAGCTGGTTGGACTGGGTAGGAGCTTGTGTAGGCTaGCTGAAGAGACCACCTAATGCAGTAGTGCCTGTGTTAGTTGGG +
Preference number: 5 (lower is better)
Translates to: AVFISWLDWVGACVG*LKRPPNAVVPVLVG
Trigger: CCCAACTAACACAGGCACTACTGCATTAGGTGGTCTCTTCAGTCAGCCTACACAAGCTCCTACCCAGTCCAACCAGCTGATAAATACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514987.5
CDS TCA 90 bp GCAGTATTTATCAGCTGGTTGGACTGGGTAGGAGCTTGTGTAGGCTaGCTGAAGAGACCACCTAATGTAGTTTGCTGCTGCTGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: AVFISWLDWVGACVG*LKRPPNVVCCCCCV
Trigger: TACACAGCAGCAGCAGCAAACTACATTAGGTGGTCTCTTCAGTCAGCCTACACAAGCTCCTACCCAGTCCAACCAGCTGATAAATACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000506098.5
ENST00000514307.5
ENST00000515460.5
CDS GCA 90 bp AGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCCAAATCCTCCAAACCCACCTGCACT +
Preference number: 5 (lower is better)
Translates to: SSACVSWGRKAECRT*SCRCCPKSSKPTCT
Trigger: AGTGCAGGTGGGTTTGGAGGATTTGGGACAACATCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAACTAACACAGGCACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506098.5
ENST00000514901.5
CDS GCA 90 bp AGTAGTGCCTGTGTTAGTTGGGGCAGAAAAGCTGAATGCAGAACCTaGAGTTGTAGATGTTGTCCCAAATCCTCCAAACCCACCTCCAAA +
Preference number: 5 (lower is better)
Translates to: SSACVSWGRKAECRT*SCRCCPKSSKPTSK
Trigger: TTTGGAGGTGGGTTTGGAGGATTTGGGACAACATCTACAACTGCAGGTTCTGCATTCAGCTTTTCTGCCCCAACTAACACAGGCACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502850.5
ENST00000510569.5
ENST00000510884.5
ENST00000515460.5
CDS-3UTR CAA 90 bp CTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCGAGGGAGCCCCAAAATaGAAGGCCATGTCGCGAAAG +
Preference number: 5 (lower is better)
Translates to: LLSHLILNLQSSEKFLKTEGAPK*KAMSRK
Trigger: CTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCTC...GGTTTTAAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp ACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCCACCATTGGTACAGGAATTAACGAGGGAGCCCCAAAATaGAAGGCCATGTCGCGAAAG +
Preference number: 5 (lower is better)
Translates to: TFSLRRSSLKPTIGTGINEGAPK*KAMSRK
Trigger: CTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCTC...GTTAATTCCTGTACCAATGGTGGGTTTTAAGGAACTTCTCCGAAGACTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AAACCAGTACTAGTTCCCGTTGTTGTGCCAAAACCAGTACCAAATCCAAAACCTGAGGGAGCCCCAAAATaGAAGGCCATGTCGCGAAAG +
Preference number: 5 (lower is better)
Translates to: KPVLVPVVVPKPVPNPKPEGAPK*KAMSRK
Trigger: CTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCTC...AGGTTTTGGATTTGGTACTGGTTTTGGCACAACAACGGGAACTAGTACTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR CAA 90 bp TTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCCACTGGCGGTGGAGTaGGCAGTCTCAAGCCCACCA +
Preference number: 5 (lower is better)
Translates to: FNDANQMAKAFLLLFQMLPLAVE*AVSSPP
Trigger: TGGTGGGCTTGAGACTGCCAACTCCACCGCCAGTGG...CAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502850.5
CDS-3UTR CAA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGGAGGGAGCCCCAAAATaGAAGGCCATGTCGCGAAAG +
Preference number: 5 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLEGAPK*KAMSRK
Trigger: CTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCTC...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCCTTAGTCATCTGATCTaGAACCTTCAGTCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: WAYSVVAGTLLEVPFGERLSHLI*NLQSSE
Trigger: CTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAG...GCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AGAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTGAGGGAGCCCCAAAATaGAAGGCCATGTCGCGAAAG +
Preference number: 5 (lower is better)
Translates to: RKFCSSHRKGYTKLLQLCEGAPK*KAMSRK
Trigger: CTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCTC...ACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp TTCACCCTGAATCGTATCCAGCTGAACTCGCAACTGCTCTTCATCAGCCTGAATTTCTTGAAGTACCATTaGGCGAACGCTCAACAACAT +
Preference number: 5 (lower is better)
Translates to: FTLNRIQLNSQLLFISLNFLKYH*ANAQQH
Trigger: ATGTTGTTGAGCGTTCGCCAAATGGTACTTCAAGAA...ATTCAGGCTGATGAAGAGCAGTTGCGAGTTCAGCTGGATACGATTCAGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp TGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCAAGGCCTTCCTGTTGTaGTTTCAAATGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: WAYSVVAGTLLEVPFGERKAFLL*FQMLLD
Trigger: ATCAAGCAGCATTTGAAACAACAACAGGAAGGCCTT...GCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCATCTCCCAACAGCGTaGGAGCAGAAAGAGCACTCG +
Preference number: 5 (lower is better)
Translates to: KELFSFSLHVVGFILKEGHLPTA*EQKEHS
Trigger: CGAGTGCTCTTTCTGCTCCAACGCTGTTGGGAGATG...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CAA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACATCTCCCAACAGCGTaGGAGCAGAAAGAGCACTCG +
Preference number: 5 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEHLPTA*EQKEHS
Trigger: CGAGTGCTCTTTCTGCTCCAACGCTGTTGGGAGATG...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CAA 90 bp GCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTACCATTTGGCGAACGCTCATTCTACCAACTGTTGTaGTTGGCTTCGAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: AYSVVAGTLLEVPFGERSFYQLL*LASNLC
Trigger: ACAGAGATTCGAAGCCAACAACAACAGTTGGTAGAA...TGAGCGTTCGCCAAATGGTACTTCAAGAAGAGTTCCAGCTACAACGCTATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp GAACTCGCAACTGCTCTTCATCAGCCTGAATGGCATAACCACTCTTCCTTTGAAAAGGCCTTCCTGTTGTaGTTTCAAATGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: ELATALHQPEWHNHSSFEKAFLL*FQMLLD
Trigger: ATCAAGCAGCATTTGAAACAACAACAGGAAGGCCTT...TTCAAAGGAAGAGTGGTTATGCCATTCAGGCTGATGAAGAGCAGTTGCGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AAACCAGTACTAGTTCCCGTTGTTGTGCCAAAACCAGTACCAAATCCAAAACCTAGACTGTTACCAAAATaGAACGGAGTCGCCGAGGTA +
Preference number: 5 (lower is better)
Translates to: KPVLVPVVVPKPVPNPKPRLLPK*NGVAEV
Trigger: TACCTCGGCGACTCCGTTCAATTTTGGTAACAGTCT...AGGTTTTGGATTTGGTACTGGTTTTGGCACAACAACGGGAACTAGTACTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR CAA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGGCAAAAGGGATTTTCTaGTGTGAATTCCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMAKGIF*CEFHWR
Trigger: CCGCCAGTGGAATTCACACAAGAAAATCCCTTTTGC...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CAA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTCAGGGTTATCTACCTaGGCCTGTTCCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQSGLST*ACSQII
Trigger: TATTATCTGGGAACAGGCCAAGGTAGATAACCCTGA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTACCAACTGTTGTTGTaGGCTTCGAATCTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQYQLLL*ASNLCF
Trigger: GAAACAGAGATTCGAAGCCAACAACAACAGTTGGTA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTTCTACCAACTGTTGTaGTTGGCTTCGAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQFYQLL*LASNLC
Trigger: ACAGAGATTCGAAGCCAACAACAACAGTTGGTAGAA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp CTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCTTCTTGAAGTACCATTaGGCGAACGCTCAACAACAT +
Preference number: 5 (lower is better)
Translates to: LLSHLILNLQSSEKFLKTFLKYH*ANAQQH
Trigger: ATGTTGTTGAGCGTTCGCCAAATGGTACTTCAAGAA...GGTTTTAAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp TGCCAAAACCAGTACCAAATCCAAAACCTTTGTTCTGAGTACCACCAAAGAGTCATAGCAGATCTGCACTaGCCAGACTGTTACCAAAAT +
Preference number: 5 (lower is better)
Translates to: CQNQYQIQNLCSEYHQRVIADLH*PDCYQN
Trigger: ATTTTGGTAACAGTCTGGCAAGTGCAGATCTGCTAT...GACTCTTTGGTGGTACTCAGAACAAAGGTTTTGGATTTGGTACTGGTTTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS-3UTR CAA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTACCAACTGTTGTTGTaGGCTTCGAATCTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMYQLLL*ASNLCF
Trigger: GAAACAGAGATTCGAAGCCAACAACAACAGTTGGTA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp ACCTTCAGTCTTCGGAGAAGTTCCTTAAAACCCACCATTGGTACAGGAATTAACTTCTGTAAAAGCTGTTaGATCTGTGCAGGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: TFSLRRSSLKPTIGTGINFCKSC*ICAGES
Trigger: ACTTTCTCCTGCACAGATCAAACAGCTTTTACAGAA...GTTAATTCCTGTACCAATGGTGGGTTTTAAGGAACTTCTCCGAAGACTGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp GAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTTCAGGGTTATCTACCTaGGCCTGTTCCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: ESSVLVIERVTPSCCNCVSGLST*ACSQII
Trigger: TATTATCTGGGAACAGGCCAAGGTAGATAACCCTGA...AACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGGAGTTTCCTCTTGTATaGTGCAATTTTGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQEFPLV*CNFGYR
Trigger: TCTGTAGCCAAAATTGCACAATACAAGAGGAAACTC...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TTGATGCTGCTTAGTCATCTGATCTTGAACCTTCAGTCTTCGGAGAAGTTCCTTGAGTTTCCTCTTGTATaGTGCAATTTTGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: LMLLSHLILNLQSSEKFLEFPLV*CNFGYR
Trigger: TCTGTAGCCAAAATTGCACAATACAAGAGGAAACTC...AAGGAACTTCTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAGCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000512151.5
CDS-3UTR CAA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTCCATGAGTTTCCTCTaGTATTGTGCAATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQSMSFL*YCAILA
Trigger: AGCCAAAATTGCACAATACAAGAGGAAACTCATGGA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000514987.5
CDS-3UTR CAA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGAAGGCCTTCCTGTTGTaGTTTCAAATGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLKAFLL*FQMLLD
Trigger: ATCAAGCAGCATTTGAAACAACAACAGGAAGGCCTT...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp AACTTCTGTCTGATCATCTGGCAATGTTTTAGTGCCCTCTACATTTACAGTAAGGCTAAGGCCTTCCTGTaGTTGTTTCAAATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: NFCLIIWQCFSALYIYSKAKAFL*LFQMLL
Trigger: AAGCAGCATTTGAAACAACAACAGGAAGGCCTTAGC...CTTACTGTAAATGTAGAGGGCACTAAAACATTGCCAGATGATCAGACAGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp GAAAGTTCTGTTCTAGTCATAGAAAGGGTTACACCAAGTTGCTGCAATTGTGTTGCTAAGGCCTTCCTGTaGTTGTTTCAAATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: ESSVLVIERVTPSCCNCVAKAFL*LFQMLL
Trigger: AAGCAGCATTTGAAACAACAACAGGAAGGCCTTAGC...AACACAATTGCAGCAACTTGGTGTAACCCTTTCTATGACTAGAACAGAACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp TTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGCAGTTTCAAAGGTTTTCTTaGAAGAGCTGTGAGGTGACT +
Preference number: 5 (lower is better)
Translates to: FSFSLHVVGFILKEGLMQFQRFS*KSCEVT
Trigger: AGTCACCTCACAGCTCTTCAAAGAAAACCTTTGAAA...CTGCATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR CAA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAAAGACTGTTACCAAAATaGAACGGAGTCGCCGAGGTA +
Preference number: 5 (lower is better)
Translates to: RSDAVRRCISQTFTQVCERLLPK*NGVAEV
Trigger: TACCTCGGCGACTCCGTTCAATTTTGGTAACAGTCT...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502850.5
CDS-3UTR CAA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACGCAAAAGGGATTTTCTaGTGTGAATTCCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNAKGIF*CEFHWR
Trigger: CCGCCAGTGGAATTCACACAAGAAAATCCCTTTTGC...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264883.8
CDS-3UTR CAA 90 bp TTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTGCTTCTACCAACTGTTGTaGTTGGCTTCGAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: LMMLIKWLRPSCCCFKCCFYQLL*LASNLC
Trigger: ACAGAGATTCGAAGCCAACAACAACAGTTGGTAGAA...GCAGCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTTCTACCAACTGTTGTaGTTGGCTTCGAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVFYQLL*LASNLC
Trigger: ACAGAGATTCGAAGCCAACAACAACAGTTGGTAGAA...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTTCTTGAAGTACCATTaGGCGAACGCTCAACAACAT +
Preference number: 5 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVFLKYH*ANAQQH
Trigger: ATGTTGTTGAGCGTTCGCCAAATGGTACTTCAAGAA...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGTTCTGTAAAAGCTGTTaGATCTGTGCAGGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLFCKSC*ICAGES
Trigger: ACTTTCTCCTGCACAGATCAAACAGCTTTTACAGAA...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp GCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTGTCAACTTCAGGGTTATCTACCTaGGCCTGTTCCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: AVRRCISQTFTQVCELSTSGLST*ACSQII
Trigger: TATTATCTGGGAACAGGCCAAGGTAGATAACCCTGA...AGTTGACAGTTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAATCAGGGTTATCTACCTaGGCCTGTTCCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: RSDAVRRCISQTFTQVCESGLST*ACSQII
Trigger: TATTATCTGGGAACAGGCCAAGGTAGATAACCCTGA...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR CAA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAACTTAGTCATCTGATCTaGAACCTTCAGTCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: RSDAVRRCISQTFTQVCELSHLI*NLQSSE
Trigger: CTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAG...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR CAA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTTAGTCATCTGATCTaGAACCTTCAGTCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: KELFSFSLHVVGFILKEGLSHLI*NLQSSE
Trigger: CTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAG...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGGAGTTTCCTCTTGTATaGTGCAATTTTGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMEFPLV*CNFGYR
Trigger: TCTGTAGCCAAAATTGCACAATACAAGAGGAAACTC...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TTGGCTTGTTCAAAATGGGCATATAGCGTTGTAGCTGGAACTCTTCTTGAAGTATCCATGAGTTTCCTCTaGTATTGTGCAATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LACSKWAYSVVAGTLLEVSMSFL*YCAILA
Trigger: AGCCAAAATTGCACAATACAAGAGGAAACTCATGGA...TACTTCAAGAAGAGTTCCAGCTACAACGCTATATGCCCATTTTGAACAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502850.5
ENST00000512151.5
CDS-3UTR CAA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTCCATGAGTTTCCTCTaGTATTGTGCAATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMSMSFL*YCAILA
Trigger: AGCCAAAATTGCACAATACAAGAGGAAACTCATGGA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCGCTAAGGCCTTCCTGTaGTTGTTTCAAATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCAKAFL*LFQMLL
Trigger: AAGCAGCATTTGAAACAACAACAGGAAGGCCTTAGC...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTGCTAAGGCCTTCCTGTaGTTGTTTCAAATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: KELFSFSLHVVGFILKEGAKAFL*LFQMLL
Trigger: AAGCAGCATTTGAAACAACAACAGGAAGGCCTTAGC...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTTTCAAAGGTTTTCTTaGAAGAGCTGTGAGGTGACT +
Preference number: 5 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMFQRFS*KSCEVT
Trigger: AGTCACCTCACAGCTCTTCAAAGAAAACCTTTGAAA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR CAA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGGGCGGAATATTATTGTaGAAATACCCTTTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLGGILL*KYPFPV
Trigger: AACAGGAAAAGGGTATTTCAACAATAATATTCCGCC...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CAA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGACTGGCGGAATATTATaGTTGAAATACCCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMTGGIL*LKYPFP
Trigger: AGGAAAAGGGTATTTCAACAATAATATTCCGCCAGT...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CAA 90 bp AGGGTTACACCAAGTTGCTGCAATTGTGTTTTTATATTGGCTTGTTCAAAATGGTACCAACTGTTGTTGTaGGCTTCGAATCTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RVTPSCCNCVFILACSKWYQLLL*ASNLCF
Trigger: GAAACAGAGATTCGAAGCCAACAACAACAGTTGGTA...CCATTTTGAACAAGCCAATATAAAAACACAATTGCAGCAACTTGGTGTAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAATTCTTGAAGTACCATTaGGCGAACGCTCAACAACAT +
Preference number: 5 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEFLKYH*ANAQQH
Trigger: ATGTTGTTGAGCGTTCGCCAAATGGTACTTCAAGAA...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR CAA 90 bp ATTTCATATTTACTTGGTATGGAAAGCAGAGTACAGGCTCAATGGACAATAATCCTTAGTCATCTGATCTaGAACCTTCAGTCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: ISYLLGMESRVQAQWTIILSHLI*NLQSSE
Trigger: CTCCGAAGACTGAAGGTTCAAGATCAGATGACTAAG...GATTATTGTCCATTGAGCCTGTACTCTGCTTTCCATACCAAGTAAATATGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
CDS-3UTR CAA 90 bp GAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGTGTTTCAAATGCTGCTaGATTTCTCGTAACAGATCT +
Preference number: 5 (lower is better)
Translates to: ELFSFSLHVVGFILKEGLCFKCC*ISRNRS
Trigger: AGATCTGTTACGAGAAATCAAGCAGCATTTGAAACA...CAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCTGATGTGTTTCAAATGCTGCTaGATTTCTCGTAACAGATCT +
Preference number: 5 (lower is better)
Translates to: LFSFSLHVVGFILKEGLMCFKCC*ISRNRS
Trigger: AGATCTGTTACGAGAAATCAAGCAGCATTTGAAACA...CATCAGACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000514987.5
CDS-3UTR CAA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAAAAGGCCTTCCTGTTGTaGTTTCAAATGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEKAFLL*FQMLLD
Trigger: ATCAAGCAGCATTTGAAACAACAACAGGAAGGCCTT...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR CAA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACGCTAAGGCCTTCCTGTaGTTGTTTCAAATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNAKAFL*LFQMLL
Trigger: AAGCAGCATTTGAAACAACAACAGGAAGGCCTTAGC...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS TCA 90 bp ATGAGTTTCCTCTTGTATTGTGCAATTTTGGCTACAGATGTAGTTTaGTTCTTTTGTAGCTCACTAATATCTTCAGATATGATCCGCGGG +
Preference number: 5 (lower is better)
Translates to: MSFLLYCAILATDVV*FFCSSLISSDMIRG
Trigger: CCCGCGGATCATATCTGAAGATATTAGTGAGCTACAAAAGAATCAAACTACATCTGTAGCCAAAATTGCACAATACAAGAGGAAACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504173.1
CDS-3UTR CAA 90 bp AAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTCACTGGCGGAATATTATaGTTGAAATACCCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: KNCFLFPSMWSVSFLRKVTGGIL*LKYPFP
Trigger: AGGAAAAGGGTATTTCAACAATAATATTCCGCCAGT...GACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CAA 90 bp AGGTCTGATGCAGTAAGAAGATGCATTTCACAAACCTTTACACAAGTTTGTGAATTCTGTAAAAGCTGTTaGATCTGTGCAGGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: RSDAVRRCISQTFTQVCEFCKSC*ICAGES
Trigger: ACTTTCTCCTGCACAGATCAAACAGCTTTTACAGAA...TTCACAAACTTGTGTAAAGGTTTGTGAAATGCATCTTCTTACTGCATCAGACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS-3UTR CAA 90 bp TCTTTAATGATGCTAATCAAATGGCTAAGGCCTTCCTGTTGTTGTTTCAAATGCTTCTGTAAAAGCTGTTaGATCTGTGCAGGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: SLMMLIKWLRPSCCCFKCFCKSC*ICAGES
Trigger: ACTTTCTCCTGCACAGATCAAACAGCTTTTACAGAA...GCATTTGAAACAACAACAGGAAGGCCTTAGCCATTTGATTAGCATCATTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTTCCATGAGTTTCCTCTaGTATTGTGCAATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KELFSFSLHVVGFILKEGSMSFL*YCAILA
Trigger: AGCCAAAATTGCACAATACAAGAGGAAACTCATGGA...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000514987.5
CDS-3UTR CAA 90 bp AGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATAAGGCCTTCCTGTTGTaGTTTCAAATGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: RFSLKSCEVTISDLMNSNKAFLL*FQMLLD
Trigger: ATCAAGCAGCATTTGAAACAACAACAGGAAGGCCTT...ATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS-3UTR CAA 90 bp AAAGAATTGTTTTCTTTTTCCCTCCATGTGGTCGGTTTCATTCTTAAGGAAGGTGGCGGAATATTATTGTaGAAATACCCTTTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KELFSFSLHVVGFILKEGGGILL*KYPFPV
Trigger: AACAGGAAAAGGGTATTTCAACAATAATATTCCGCC...ACCTTCCTTAAGAATGAAACCGACCACATGGAGGGAAAAAGAAAACAATTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000514987.5
CDS-3UTR CAA 90 bp AAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTTGTCAGTAAACGAGTTTCCTCTTGTATaGTGCAATTTTGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: KSCEVTISDLMNSNLSVNEFPLV*CNFGYR
Trigger: TCTGTAGCCAAAATTGCACAATACAAGAGGAAACTC...GTTTACTGACAAATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000502850.5
CDS-3UTR CAA 90 bp AGGGTTACACCAAGTTGCTGCAATTGTGTTTTTATATTGGCTTGTTCAAAATGGTGTTTCAAATGCTGCTaGATTTCTCGTAACAGATCT +
Preference number: 5 (lower is better)
Translates to: RVTPSCCNCVFILACSKWCFKCC*ISRNRS
Trigger: AGATCTGTTACGAGAAATCAAGCAGCATTTGAAACA...CCATTTTGAACAAGCCAATATAAAAACACAATTGCAGCAACTTGGTGTAACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502850.5
ENST00000507257.5
ENST00000512151.5
CDS-3UTR CAA 90 bp ATTTCATATTTACTTGGTATGGAAAGCAGAGTACAGGCTCAATGGACAATAATCTTTCAAAGGTTTTCTTaGAAGAGCTGTGAGGTGACT +
Preference number: 5 (lower is better)
Translates to: ISYLLGMESRVQAQWTIIFQRFS*KSCEVT
Trigger: AGTCACCTCACAGCTCTTCAAAGAAAACCTTTGAAA...GATTATTGTCCATTGAGCCTGTACTCTGCTTTCCATACCAAGTAAATATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264883.8
ENST00000507257.5
CDS-3UTR CAA 90 bp AGGTTTTCTTTGAAGAGCTGTGAGGTGACTATTTCAGATTTGATGAACAGTAATTGTTTCAAATGCTGCTaGATTTCTCGTAACAGATCT +
Preference number: 5 (lower is better)
Translates to: RFSLKSCEVTISDLMNSNCFKCC*ISRNRS
Trigger: AGATCTGTTACGAGAAATCAAGCAGCATTTGAAACA...ATTACTGTTCATCAAATCTGAAATAGTCACCTCACAGCTCTTCAAAGAAAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000502850.5
ENST00000507257.5
CDS GCA 72 bp AAATCCTCCAAACCCACCCGCGGGGGCCGCGGTGGCTaGAGCGGTACCGGAGGTGCCCGAGGGAGCCCCAAA +
Preference number: 6 (lower is better)
Translates to: KSSKPTRGGRGG*SGTGGARGSPK
Trigger: TTTGGGGCTCCCTCGGGCACCTCCGGTACCGCTGCAGCCACCGCGGCCCCCGCGGGTGGGTTTGGAGGATTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000507257.5
ENST00000512151.5
ENST00000514987.5
CDS GCA 72 bp CCCCGTGGCCTCCTCGGGTGCCGCCTCGGCCCACTCTaGCGCCGCCCGCCCTTTTCCAATGCCTCTAAAGTC +
Preference number: 6 (lower is better)
Translates to: PRGLLGCRLGPL*RRPPFSNASKV
Trigger: GACTTTAGAGGCATTGGAAAAGGGCGGGCGGCGGCAGAGTGGGCCGAGGCGGCACCCGAGGAGGCCACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510884.5
ENST00000514307.5
CDS GCA 72 bp ATATCTTCAGATATGATCCGCGGGGGCCGCGGTGGCTaGAGCGGTACCGGAGGTGCCCGAGGGAGCCCCAAA +
Preference number: 6 (lower is better)
Translates to: ISSDMIRGGRGG*SGTGGARGSPK
Trigger: TTTGGGGCTCCCTCGGGCACCTCCGGTACCGCTGCAGCCACCGCGGCCCCCGCGGATCATATCTGAAGATAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504173.1
CDS CCA 72 bp ACTAATATCTTCAGATATGATCCGCGGGGGCCGCGGTaGCTGCAGCGGTACCGGAGGTGCCCGAGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: TNIFRYDPRGPR*LQRYRRCPREP
Trigger: GGGCTCCCTCGGGCACCTCCGGTACCGCTGCAGCCACCGCGGCCCCCGCGGATCATATCTGAAGATATTAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504173.1
CDS CCA 72 bp AATGTTTTAGTAATAGCAGATCCGCGGGGGCCGCGGTaGCTGCAGCGGTACCGGAGGTGCCCGAGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: NVLVIADPRGPR*LQRYRRCPREP
Trigger: GGGCTCCCTCGGGCACCTCCGGTACCGCTGCAGCCACCGCGGCCCCCGCGGATCTGCTATTACTAAAACATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508583.5
CDS TCA 72 bp CAGCGGTACCGGAGGTGCCCGAGGGAGCCCCAAAATTaGAGGCCATGTCGCGAAAGCAGGAGACCAAGTAGG +
Preference number: 6 (lower is better)
Translates to: QRYRRCPREPQN*RPCRESRRPSR
Trigger: CCTACTTGGTCTCCTGCTTTCGCGACATGGCCTTCAATTTTGGGGCTCCCTCGGGCACCTCCGGTACCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502850.5
ENST00000504173.1
ENST00000507257.5
ENST00000508583.5
CDS TCA 72 bp ATCAGCTGGTTGGACTGGGTAGGAGCTTGTGTAGGCTaGCTGAAGAGACCACCTAATGCAGTAGTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: ISWLDWVGACVG*LKRPPNAVVPV
Trigger: CACAGGCACTACTGCATTAGGTGGTCTCTTCAGTCAGCCTACACAAGCTCCTACCCAGTCCAACCAGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514987.5
CDS TCA 72 bp ATCAGCTGGTTGGACTGGGTAGGAGCTTGTGTAGGCTaGCTGAAGAGACCACCTAATGTAGTTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ISWLDWVGACVG*LKRPPNVVCCC
Trigger: GCAGCAGCAAACTACATTAGGTGGTCTCTTCAGTCAGCCTACACAAGCTCCTACCCAGTCCAACCAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264883.8
ENST00000506098.5
ENST00000514307.5
ENST00000515460.5
CDS CAA 72 bp CCAAACCCACCTGCACTTGCCAGACTGTTACCAAAATaGAACGGAGTCGCCGAGGTAGTAGAAACACCGAAA +
Preference number: 6 (lower is better)
Translates to: PNPPALARLLPK*NGVAEVVETPK
Trigger: TTTCGGTGTTTCTACTACCTCGGCGACTCCGTTCAATTTTGGTAACAGTCTGGCAAGTGCAGGTGGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506098.5
ENST00000514901.5
CDS CAA 90 bp CCAAATCCTCCAAACCCACCTGCACTTGCCAGACTGTTACCAAAATaGAACGGAGTCGCCGAGGTAGTAGAAACACCGAAATTCCCAATA +
Preference number: 6 (lower is better)
Translates to: PNPPNPPALARLLPK*NGVAEVVETPKFPI
Trigger: TATTGGGAATTTCGGTGTTTCTACTACCTCGGCGACTCCGTTCAATTTTGGTAACAGTCTGGCAAGTGCAGGTGGGTTTGGAGGATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506098.5
ENST00000514901.5
CDS CAA 72 bp GAATGTGTTTCTGCACTTGCCAGACTGTTACCAAAATaGAACGGAGTCGCCGAGGTAGTAGAAACACCGAAA +
Preference number: 6 (lower is better)
Translates to: ECVSALARLLPK*NGVAEVVETPK
Trigger: TTTCGGTGTTTCTACTACCTCGGCGACTCCGTTCAATTTTGGTAACAGTCTGGCAAGTGCAGAAACACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502850.5
CDS CAA 72 bp AATAGCAGATCTGCACTTGCCAGACTGTTACCAAAATaGAACGGAGTCGCCGAGGTAGTAGAAACACCGAAA +
Preference number: 6 (lower is better)
Translates to: NSRSALARLLPK*NGVAEVVETPK
Trigger: TTTCGGTGTTTCTACTACCTCGGCGACTCCGTTCAATTTTGGTAACAGTCTGGCAAGTGCAGATCTGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS GCA 72 bp GCATGCAACTATAACCTACTGCTAGTTTGCTGCTGCTaGTGTGTATTAAATCCTCCAAATCCCAGTCCAGTT +
Preference number: 6 (lower is better)
Translates to: ACNYNLLLVCCC*CVLNPPNPSPV
Trigger: AACTGGACTGGGATTTGGAGGATTTAATACACAGCAGCAGCAGCAAACTAGCAGTAGGTTATAGTTGCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS GCA 72 bp AAACCACTAGCCCATCTTCATCTTTATTACTGGGCATaGAACTATAACCTACTGCTAGTTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: KPLAHLHLYYWA*NYNLLLVCCCC
Trigger: GCAGCAGCAGCAAACTAGCAGTAGGTTATAGTTGCATGCCCAGTAATAAAGATGAAGATGGGCTAGTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS CAA 90 bp TGTTTTAGTAATAGCAGATCTGCACTTGCCAGACTGTTACCAAAATaGAACGGAGTCGCCGAGGTAGTAGAAACACCGAAATTCCCAATA +
Preference number: 6 (lower is better)
Translates to: CFSNSRSALARLLPK*NGVAEVVETPKFPI
Trigger: TATTGGGAATTTCGGTGTTTCTACTACCTCGGCGACTCCGTTCAATTTTGGTAACAGTCTGGCAAGTGCAGATCTGCTATTACTAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513352.1
CDS CCA 72 bp AAACTAAAACCACTAGCCCATCTTCATCTTTATTACTaGGCATGCAACTATAACCTACTGCTAGTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: KLKPLAHLHLYY*ACNYNLLLVCC
Trigger: GCAGCAAACTAGCAGTAGGTTATAGTTGCATGCCCAGTAATAAAGATGAAGATGGGCTAGTGGTTTTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507257.5
ENST00000512151.5
CDS CAA 90 bp CATGCAACTATAACCTACTGCCTTAAATCGGCAAAAGGGATTTTCTaGTGTGAATTCCACTGGCGGAATATTATTGTTGAAATACCCTTT +
Preference number: 6 (lower is better)
Translates to: HATITYCLKSAKGIF*CEFHWRNIIVEIPF
Trigger: AAAGGGTATTTCAACAATAATATTCCGCCAGTGGAATTCACACAAGAAAATCCCTTTTGCCGATTTAAGGCAGTAGGTTATAGTTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000514987.5
ENST00000515460.5
CDS CAA 72 bp ATAACCTACTGCCTTAAATCGGCAAAAGGGATTTTCTaGTGTGAATTCCACTGGCGGAATATTATTGTTGAA +
Preference number: 6 (lower is better)
Translates to: ITYCLKSAKGIF*CEFHWRNIIVE
Trigger: TTCAACAATAATATTCCGCCAGTGGAATTCACACAAGAAAATCCCTTTTGCCGATTTAAGGCAGTAGGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264883.8
ENST00000514987.5
ENST00000515460.5