Pregenerated sensors for NUP43 (Homo sapiens)
Ensembl gene IDs: ENSG00000120253Ensembl transcript IDs: ENST00000340413.7, ENST00000367402.6, ENST00000367404.8, ENST00000403890.7, ENST00000543637.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCACTAAGAGACGGAGGTTaGAGTGAGCTGAGATCATGC | + |
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Preference number: 2 (lower is better) Translates to: GETLSSLLIQKSAGSSGSLRDGG*SELRSC Trigger: GCATGATCTCAGCTCACTGCAACCTCCGTCTCTTAG...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCATCCCATAACCACCATTaGTGTGTTAATTCCCACAAC | + |
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Preference number: 2 (lower is better) Translates to: GETLSSLLIQKSAGSSGSSHNHH*CVNSHN Trigger: GTTGTGGGAATTAACACATCAATGGTGGTTATGGGA...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| 3UTR-3UTR CCA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTCGGGCTGATTACCTGTaGTCAGGAGTTCGAGACCAG | + |
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Preference number: 2 (lower is better) Translates to: TIEGMMKFRLEMITKVLSRADYL*SGVRDQ Trigger: CTGGTCTCGAACTCCTGACCACAGGTAATCAGCCCG...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| 3UTR-3UTR GCA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCAGGCAACTTTCAGCTATaGTGTGAAGCTAAACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: GETLSSLLIQKSAGSSGSGNFQL*CEAKQK Trigger: CTTTTGTTTAGCTTCACAGCATAGCTGAAAGTTGCC...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| 3UTR-3UTR CAA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCAAGTCAAAACTGGGCATaGACATTAATGGTAGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: GETLSSLLIQKSAGSSGSSQNWA*TLMVVY Trigger: GTAAACTACCATTAATGTCAATGCCCAGTTTTGACT...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| 3UTR-3UTR CAA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTAGGCAGGAGAATTGCTaGAACCTAAGAGACGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TIEGMMKFRLEMITKVLSRQENC*NLRDGG Trigger: ACCTCCGTCTCTTAGGTTCAAGCAATTCTCCTGCCT...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| 3UTR-3UTR CAA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTTCTAATAGCAGTGATTaGTCATTAAGGTCTCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: TIEGMMKFRLEMITKVLSSNSSD*SLRSQV Trigger: GACCTGAGACCTTAATGACAAATCACTGCTATTAGA...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CCA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCAGGAGGTCGAGGCGGGTaGATCATGAGGTCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GETLSSLLIQKSAGSSGSGGRGG*IMRSRD Trigger: ATCTCTTGACCTCATGATCCACCCGCCTCGACCTCC...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CCA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCAGTAATCACAGCACTTTaGGAGGTCGAGGCGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GETLSSLLIQKSAGSSGSVITAL*EVEAGG Trigger: TCCACCCGCCTCGACCTCCCAAAGTGCTGTGATTAC...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGGAGGCCGAGGCGGGCTaGTTACCTGTGGTCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALEAEAG*LPVVRS Trigger: ACTCCTGACCACAGGTAATCAGCCCGCCTCGGCCTC...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATGTGGAAGCATCCCAGTaGCAGAGGGATCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHVEASQ*QRDPSS Trigger: TGAAGATGGATCCCTCTGGCACTGGGATGCTTCCAC...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR CCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATGCTGTAGTCCACTGCTaGTTGACTGACAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHAVVHC*LTDRVW Trigger: CCAGACTCTGTCAGTCAACCAGCAGTGGACTACAGC...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR CCA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCAATAACAACTGGTGATTaGCTCATCTCACAGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GETLSSLLIQKSAGSSGSITTGD*LISQAH Trigger: GTGAGCCTGTGAGATGAGCCAATCACCAGTTGTTAT...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATCCACTGCTGGTTGACTaGCAGAGTCTGGTTATTTGG | + |
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Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHPLLVD*QSLVIW Trigger: CCAAATAACCAGACTCTGTCAGTCAACCAGCAGTGG...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR TCA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTCCCTGGCCAACATGGTaGAACCCTGTCGTCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: VHNLLPSVIYRILQLFGSPWPTW*NPVVST Trigger: AGTAGAGACGACAGGGTTTCACCATGTTGGCCAGGG...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCTGATCTCGAACTCTTaGCCTCAGGTGCTTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGLISNS*PQVLHP Trigger: TGGGTGAAGCACCTGAGGTCAAGAGTTCGAGATCAG...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATAAATTTCCTCCATaGCGAAAGCGGCCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGHKFPP*RKRPQQ Trigger: CTGCTGCGGCCGCTTTCGGCATGGAGGAAATTTATG...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR GCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGCATAAATTTCCTCCATaGCGAAAGCGGCCGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALHKFPP*RKRPQQ Trigger: CTGCTGCGGCCGCTTTCGGCATGGAGGAAATTTATG...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR GCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGTGCTATAGGAAGGACTaGCAGGGCCTGTGTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGCYRKD*QGLCGS Trigger: ACTACCACACAGGCCCTGGCAGTCCTTCCTATAGCA...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR GCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGGTGGAAGCATCCCAGTaGCAGAGGGATCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALVEASQ*QRDPSS Trigger: TGAAGATGGATCCCTCTGGCACTGGGATGCTTCCAC...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR GCA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTGGTCACTGCAACCTCTaGCTCCCGGGTTTGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TIEGMMKFRLEMITKVLSGHCNL*LPGLSN Trigger: ATTGCTCAAACCCGGGAGGCAGAGGTTGCAGTGACC...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CCA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTCAGGCTGGAGTGAAGTaGCACGATCTTGGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VHNLLPSVIYRILQLFGSQAGVK*HDLGSL Trigger: CAGTGACCCAAGATCGTGCCACTTCACTCCAGCCTG...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGGCCAGCGGGTTTTGCTaGTTTTCTGGGACACAAACT | + |
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Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALASGFC*FSGTQT Trigger: AGTTTGTGTCCCAGAAAATCAGCAAAACCCGCTGGC...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR TCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGTCGGTCACCAGTCAGTaGCAATATCTGAGAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALSVTSQ*QYLRRL Trigger: GAGCCTTCTCAGATATTGTCACTGACTGGTGACCGA...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATGAACATAACAACTGGTaGTTGGCTCATCTCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHEHNNW*LAHLTG Trigger: GCCTGTGAGATGAGCCAATCACCAGTTGTTATGTTC...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCTGTACATGGTGCACTaGTATAGGAAGGACTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGLYMVH*YRKDCQ Trigger: CTGGCAGTCCTTCCTATAGCAGTGCACCATGTACAG...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR TCA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTGCCAGCGGGTTTTGCTaGTTTTCTGGGACACAAACT | + |
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Preference number: 4 (lower is better) Translates to: TIEGMMKFRLEMITKVLSASGFC*FSGTQT Trigger: AGTTTGTGTCCCAGAAAATCAGCAAAACCCGCTGGC...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTCCTTGGTGAAAGAGTaGCGACTTTTCAGGTACATC | + |
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Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHSLVKE*RLFRYI Trigger: GATGTACCTGAAAAGTCGTCACTCTTTCACCAAGGA...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR GCA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCAGAGTGTACTACTATCTaGATTGTCTATGGTTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: GETLSSLLIQKSAGSSGSECTTI*IVYGSY Trigger: GTAAGAACCATAGACAATGCAGATAGTAGTACACTC...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCATCTAGTAACATAAATTaGTTCTGCATCGGTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: GETLSSLLIQKSAGSSGSSSNIN*FCIGST Trigger: TGTGGAACCGATGCAGAAGCAATTTATGTTACTAGA...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTCTAAGAGACGGAGGTTaGAGTGAGCTGAGATCATGC | + |
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Preference number: 4 (lower is better) Translates to: VHNLLPSVIYRILQLFGSLRDGG*SELRSC Trigger: GCATGATCTCAGCTCACTGCAACCTCCGTCTCTTAG...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCTGAGGCAGGAGAATTaGTTGAACCTAAGAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGLRQEN*LNLRDG Trigger: TCCGTCTCTTAGGTTCAAGCAATTCTCCTGCCTCAG...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGTCCTTGGTGAAAGAGTaGCGACTTTTCAGGTACATC | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGSLVKE*RLFRYI Trigger: GATGTACCTGAAAAGTCGTCACTCTTTCACCAAGGA...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR TCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCTTCTTCCTCCTTGGTaGAAGAGTGACGACTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGLLPPW*KSDDFS Trigger: TGAAAAGTCGTCACTCTTTCACCAAGGAGGAAGAAG...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR CCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATGGTAAAAAGATGTTCTaGGTTGGATGGGTGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHGKKMF*VGWVKV Trigger: CACTTTCACCCATCCAACCCAGAACATCTTTTTACC...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR CCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATGTTACAAATACTAAGTaGCTCACGCCTGTAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHVTNTK*LTPVIP Trigger: TGGGATTACAGGCGTGAGCCACTTAGTATTTGTAAC...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTCTTCTTCCTCCTTGGTaGAAGAGTGACGACTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TIEGMMKFRLEMITKVLSLLPPW*KSDDFS Trigger: TGAAAAGTCGTCACTCTTTCACCAAGGAGGAAGAAG...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGGGAAGTAAGCTTGTaGTTTCAATTCGGTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHWEVSL*FQFGLL Trigger: CAAAAGACCGAATTGAAATCACAAGCTTACTTCCCA...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR TCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGTCCCATAACCACCATTaGTGTGTTAATTCCCACAAC | + |
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Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALSHNHH*CVNSHN Trigger: GTTGTGGGAATTAACACATCAATGGTGGTTATGGGA...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTCCAGTAGCTACAACATaGTGTTGGTTGGGATGTCTA | + |
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Preference number: 4 (lower is better) Translates to: VHNLLPSVIYRILQLFGSPVATT*CWLGCL Trigger: TAGACATCCCAACCAACAGCATGTTGTAGCTACTGG...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGGGTAAAAAGATGTTCTaGGTTGGATGGGTGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGGKKMF*VGWVKV Trigger: CACTTTCACCCATCCAACCCAGAACATCTTTTTACC...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR CCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGGAACTTCCCACACTATaGTTCTTACAGCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALELPTL*FLQLPC Trigger: ACAAGGAAGCTGTAAGAACCATAGTGTGGGAAGTTC...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367404.8 |
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| CDS-3UTR TCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGTGGGAAGTAAGCTTGTaGTTTCAATTCGGTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGWEVSL*FQFGLL Trigger: CAAAAGACCGAATTGAAATCACAAGCTTACTTCCCA...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR TCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGTTGGGTCTAACAAGCTaGAAGAGTTCTGCTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGLGLTS*KSSAQK Trigger: TTTTTGAGCAGAACTCTTTCAGCTTGTTAGACCCAA...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTAGATCCTGCAACCCTTaGAAGACACTCTATTTGACA | + |
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Preference number: 4 (lower is better) Translates to: VHNLLPSVIYRILQLFGSRSCNP*KTLYLT Trigger: TGTCAAATAGAGTGTCTTTCAAGGGTTGCAGGATCT...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTCTAGTAACATAAATTaGTTCTGCATCGGTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: RILQLFGSVRLTKVKTGHSSNIN*FCIGST Trigger: TGTGGAACCGATGCAGAAGCAATTTATGTTACTAGA...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR GCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGGGCAACTTTCAGCTATaGTGTGAAGCTAAACAAAAG | + |
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Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALGNFQL*CEAKQK Trigger: CTTTTGTTTAGCTTCACAGCATAGCTGAAAGTTGCC...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGTGGTTATTTGGATGGTaGAGGAAAACTGTTACACAT | + |
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Preference number: 4 (lower is better) Translates to: DSTTVWECQANKSQNWALWLFGW*RKTVTH Trigger: ATGTGTAACAGTTTTCCTTCACCATCCAAATAACCA...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR TCA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTCTGTCAATAATACTCTaGAGGCAACCTATTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: VHNLLPSVIYRILQLFGSLSIIL*RQPIHQ Trigger: CTGATGAATAGGTTGCCTTCAGAGTATTATTGACAG...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CCA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGTATCTGCATTGTCTATaGTTCTTACAGCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: YRILQLFGSVRLTKVKTGYLHCL*FLQLPC Trigger: ACAAGGAAGCTGTAAGAACCATAGACAATGCAGATA...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR TCA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTTGGTTATTTGGATGGTaGAGGAAAACTGTTACACAT | + |
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Preference number: 4 (lower is better) Translates to: TIEGMMKFRLEMITKVLSWLFGW*RKTVTH Trigger: ATGTGTAACAGTTTTCCTTCACCATCCAAATAACCA...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR GCA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTCACACACTAAAACCCTaGCATAAAGTTGTATCAATT | + |
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Preference number: 4 (lower is better) Translates to: TIEGMMKFRLEMITKVLSHTLKP*HKVVSI Trigger: AATTGATACAACTTTATGGCAGGGTTTTAGTGTGTG...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| 3UTR CAA 72 bp | ACCAAGGTACTTTCTATCTCTAAGATCCTGCAACCCTaGAAAGACACTCTATTTGACAGTTTCATGAATAAA | + |
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Preference number: 4 (lower is better) Translates to: TKVLSISKILQP*KDTLFDSFMNK Trigger: TTTATTCATGAAACTGTCAAATAGAGTGTCTTTCAAGGGTTGCAGGATCTTAGAGATAGAAAGTACCTTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS TCA 90 bp | CGGTCTGTAAACTTCCCGGAGGCAGCGGTCGCCAGCGGGTTTTGCTaGTTTTCTGGGACACAAACTTCGCATAAATTTCCTCCATGCCGA | + |
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Preference number: 5 (lower is better) Translates to: RSVNFPEAAVASGFC*FSGTQTSHKFPPCR Trigger: TCGGCATGGAGGAAATTTATGCGAAGTTTGTGTCCCAGAAAATCAGCAAAACCCGCTGGCGACCGCTGCCTCCGGGAAGTTTACAGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000340413.7 ENST00000367402.6 ENST00000367404.8 ENST00000403890.7 ENST00000543637.1 |
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| CDS-3UTR CAA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATGGTCGCCAGCGGGTTTaGCTGATTTTCTGGGACACA | + |
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Preference number: 5 (lower is better) Translates to: RILQLFGSVRLTKVKTGHGRQRV*LIFWDT Trigger: TGTGTCCCAGAAAATCAGCAAAACCCGCTGGCGACC...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR CAA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTCGGGGTTTCGCCATGTaGGCCAGGCTGATCTCGAAC | + |
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Preference number: 5 (lower is better) Translates to: VHNLLPSVIYRILQLFGSRGFAM*ARLISN Trigger: GTTCGAGATCAGCCTGGCCAACATGGCGAAACCCCG...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCTCTGCCTCCCGGGTTaGAGCAATTCTCCTGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: YRILQLFGSVRLTKVKTGLCLPG*SNSPAS Trigger: TGAGGCAGGAGAATTGCTCAAACCCGGGAGGCAGAG...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | TATCGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGGGTCGCCAGCGGGTTTaGCTGATTTTCTGGGACACA | + |
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Preference number: 5 (lower is better) Translates to: YRILQLFGSVRLTKVKTGGRQRV*LIFWDT Trigger: TGTGTCCCAGAAAATCAGCAAAACCCGCTGGCGACC...CCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000340413.7 ENST00000367404.8 |
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| CDS-3UTR CAA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATAGGCAGGAGAATTGCTaGAACCTAAGAGACGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RILQLFGSVRLTKVKTGHRQENC*NLRDGG Trigger: ACCTCCGTCTCTTAGGTTCAAGCAATTCTCCTGCCT...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCAAAGATCCTGCAACCCTaGAAAGACACTCTATTTGAC | + |
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Preference number: 5 (lower is better) Translates to: GETLSSLLIQKSAGSSGSKILQP*KDTLFD Trigger: GTCAAATAGAGTGTCTTTCAAGGGTTGCAGGATCTT...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | GGTGAAACCCTGTCGTCTCTACTAATACAAAAATCAGCCGGGAGCAGTGGCTCATCTAATAGCAGTGATTaGTCATTAAGGTCTCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: GETLSSLLIQKSAGSSGSSNSSD*SLRSQV Trigger: GACCTGAGACCTTAATGACAAATCACTGCTATTAGA...TGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGACAGGGTTTCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | CGGATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATAACCCTGCCATAAAGTaGTATCAATTAGGGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: RILQLFGSVRLTKVKTGHNPAIK*YQLGLF Trigger: GAACAGCCCTAATTGATACAACTTTATGGCAGGGTT...ATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTAGCTACAACATGCTGTaGGTTGGGATGTCTATCAAC | + |
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Preference number: 5 (lower is better) Translates to: VHNLLPSVIYRILQLFGSSYNML*VGMSIN Trigger: GTTGATAGACATCCCAACCAACAGCATGTTGTAGCT...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTAATTGTAGGAACCCATaGGTAGTTCCCATAACCACC | + |
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Preference number: 5 (lower is better) Translates to: TIEGMMKFRLEMITKVLSNCRNP*VVPITT Trigger: GGTGGTTATGGGAACTACCAATGGGTTCCTACAATT...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | GATTCTACAACTGTTTGGGAGTGTCAGGCTAACAAAAGTCAAAACTGGGCATTGGTACTACTATCTGCATaGTCTATGGTTCTTACAGCT | + |
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Preference number: 5 (lower is better) Translates to: DSTTVWECQANKSQNWALVLLSA*SMVLTA Trigger: AGCTGTAAGAACCATAGACAATGCAGATAGTAGTAC...CAATGCCCAGTTTTGACTTTTGTTAGCCTGACACTCCCAAACAGTTGTAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | GTTCACAATCTTTTGCCATCAGTCATCTATCGGATTCTACAACTGTTTGGGAGTCACAGCTACACATCTTaGTCATTTTTGCTCTACTCA | + |
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Preference number: 5 (lower is better) Translates to: VHNLLPSVIYRILQLFGSHSYTS*SFLLYS Trigger: TGAGTAGAGCAAAAATGACAAAGATGTGTAGCTGTG...ACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS-3UTR CAA 90 bp | ACCATAGAAGGGATGATGAAATTTAGGCTGGAGATGATCACCAAGGTACTTTCTAGTCAAAACTGGGCATaGACATTAATGGTAGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: TIEGMMKFRLEMITKVLSSQNWA*TLMVVY Trigger: GTAAACTACCATTAATGTCAATGCCCAGTTTTGACT...AGAAAGTACCTTGGTGATCATCTCCAGCCTAAATTTCATCATCCCTTCTATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340413.7 |
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| CDS GCA 72 bp | AATTTCCTCCATGCCGAAAGCGGCCGCAGCAGGTACTaGAAAAAGCAAGCACAGTACGCGCCTCTCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: NFLHAESGRSRY*KKQAQYAPLST Trigger: GGTGCTGAGAGGCGCGTACTGTGCTTGCTTTTTGCAGTACCTGCTGCGGCCGCTTTCGGCATGGAGGAAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000403890.7 |
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| CDS TCA 72 bp | AACTTCCCGGAGGCAGCGGTCGCCAGCGGGTTTTGCTaGTTTTCTGGGACACAAACTTCGCATAAATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NFPEAAVASGFC*FSGTQTSHKFP Trigger: AGGAAATTTATGCGAAGTTTGTGTCCCAGAAAATCAGCAAAACCCGCTGGCGACCGCTGCCTCCGGGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000340413.7 ENST00000367402.6 ENST00000367404.8 ENST00000403890.7 ENST00000543637.1 |
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| CDS GCA 72 bp | TTTTCTGGGACACAAACTTCGCATAAATTTCCTCCATaGCGAAAGCGGCCGCAGCAGGTACTGCAAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSGTQTSHKFPP*RKRPQQVLQKA Trigger: TGCTTTTTGCAGTACCTGCTGCGGCCGCTTTCGGCATGGAGGAAATTTATGCGAAGTTTGTGTCCCAGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367402.6 ENST00000403890.7 ENST00000543637.1 |
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