Pregenerated sensors for NUP37 (Homo sapiens)
Ensembl gene IDs: ENSG00000075188Ensembl transcript IDs: ENST00000251074.5, ENST00000543021.5, ENST00000547269.1, ENST00000548994.1, ENST00000550459.1, ENST00000551200.5, ENST00000551744.2, ENST00000552283.6
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACAGCTTGTGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATaGCAGGACAGTCCAGATCCAACGGCTACAGAACCCATGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: NSLWSPPITHRGRVR*QDSPDPTATEPMRM Trigger: CATCCTCATGGGTTCTGTAGCCGTTGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCACAAGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR CCA 90 bp | GTACAGAAAACACTTTATACTTCAGTCACCCAAAACAACAGCTTGTaGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: VQKTLYTSVTQNNSL*SPPITHRGRVRCQD Trigger: GTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCACAAGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTTCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR TCA 90 bp | AAATGTGATACAGCTGTCTTAGATAACGTTGATTTTAATGATCTTTaGGAGGGTGAACACAGTTCCATTGCCAACAGGTCCCATCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: KCDTAVLDNVDFNDL*EGEHSSIANRSHLK Trigger: TTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCATTAAAATCAACGTTATCTAAGACAGCTGTATCACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR TCA 90 bp | CTTGCAGGAATGGGCAGTTTGTCAAAATGTATTGGATTCTGTATGTaGCTGACAAGCAGAACCATAATTTTATATGCTTCTGACTGTACC | + |
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Preference number: 1 (lower is better) Translates to: LAGMGSLSKCIGFCM*LTSRTIILYASDCT Trigger: GGTACAGTCAGAAGCATATAAAATTATGGTTCTGCTTGTCAGTCACATACAGAATCCAATACATTTTGACAAACTGCCCATTCCTGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR GCA 90 bp | CTGTACTTTACAAGAGGAAATGAAGCTTCAAAAAGGGCATTAACTTaGAGGAATGGGCAGTTTGTCAAAATGTATTGGATTCTGTATGTG | + |
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Preference number: 1 (lower is better) Translates to: LYFTRGNEASKRALT*RNGQFVKMYWILYV Trigger: CACATACAGAATCCAATACATTTTGACAAACTGCCCATTCCTGCAAGTTAATGCCCTTTTTGAAGCTTCATTTCCTCTTGTAAAGTACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGTTCGATGCCAGGACAGTCCAGATCCAACGGCTACAGAACCCATGAGGACTGGCTTGCCATTTTaGCAGGATAACCAGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GRVRCQDSPDPTATEPMRTGLPF*QDNQWL Trigger: CAACCACTGGTTATCCTGGCAAAATGGCAAGCCAGT...CCTCATGGGTTCTGTAGCCGTTGGATCTGGACTGTCCTGGCATCGAACTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR TCA 90 bp | ATGATCTTTGAGAGGGTGAACACAGTTCCATTGCCAACAGGTCCCATCTCAAAATCGCCCAGGCTGCAGTaGAGTGGCACGATCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: MIFERVNTVPLPTGPISKSPRLQ*SGTILA Trigger: AGCCAAGATCGTGCCACTTCACTGCAGCCTGGGCGA...TTTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGTTCGATGCCAGGACAGTCCAGATCCAACGGCTACAGAACCCATGAGGAATTTGAAACTGGCTTaGCATTTTGCCAGGATAACC | + |
|
Preference number: 2 (lower is better) Translates to: GRVRCQDSPDPTATEPMRNLKLA*HFARIT Trigger: GGTTATCCTGGCAAAATGGCAAGCCAGTTTCAAATT...CCTCATGGGTTCTGTAGCCGTTGGATCTGGACTGTCCTGGCATCGAACTCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR CCA 90 bp | CACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATCCAACGGCTACAGAACAGATTGGCAAGAATGTaGGATTTGGCATCAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: HTEGEFDARTVQIQRLQNRLARM*DLASKL Trigger: GAGTTTTGATGCCAAATCCCACATTCTTGCCAATCT...GTTCTGTAGCCGTTGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAGGAAATGAAGCTTCAAAAAGGGCATTAACTTGCAGGAATGGGCAGTTTCAGGCTGCAGTGAAGTaGCACGATCTTGGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: TRGNEASKRALTCRNGQFQAAVK*HDLGSL Trigger: CAGTGAGCCAAGATCGTGCCACTTCACTGCAGCCTG...AAACTGCCCATTCCTGCAAGTTAATGCCCTTTTTGAAGCTTCATTTCCTCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR CAA 90 bp | AAGGTACAGAAAACACTTTATACTTCAGTCACCCAAAACAACAGCTaGTGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KVQKTLYTSVTQNNS*WSPPITHRGRVRCQ Trigger: CTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCACAAGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTTCTGTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGATCCCATATATCAGATGTTCTAAGACTGTTAGAACACCTCGTCCAAAGGAAGTGGCACGATCTTaGCTCACTGTAACCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLIPYIRCSKTVRTPRPKEVARS*LTVTSA Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGTGCCACTTC...CTTTGGACGAGGTGTTCTAACAGTCTTAGAACATCTGATATATGGGATCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR-3UTR CCA 90 bp | AATAGCCTGTTGGGCCAAAAGATCATAAAACCGGATTGTTCCATTCTTCTCTGCATAGTAGTGGTAGATTaGCAAGAATGTGGGATTTGG | + |
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Preference number: 2 (lower is better) Translates to: NSLLGQKIIKPDCSILLCIVVVD*QECGIW Trigger: CCAAATCCCACATTCTTGCCAATCTACCACTACTAT...GCAGAGAAGAATGGAACAATCCGGTTTTATGATCTTTTGGCCCAACAGGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR TCA 90 bp | ACAAGAGGAAATGAAGCTTCAAAAAGGGCATTAACTTGCAGGAATGGGCAGTTTATTGGATTCTGTATGTaGCTGACAAGCAGAACCATA | + |
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Preference number: 2 (lower is better) Translates to: TRGNEASKRALTCRNGQFIGFCM*LTSRTI Trigger: TATGGTTCTGCTTGTCAGTCACATACAGAATCCAAT...AAACTGCCCATTCCTGCAAGTTAATGCCCTTTTTGAAGCTTCATTTCCTCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR CAA 90 bp | ATAACGTTGATTTTAATGATCTTTGAGAGGGTGAACACAGTTCCATaGCCAACAGGTCCCATCTCAAAAACACTTAAGTTTCTTGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: ITLILMIFERVNTVP*PTGPISKTLKFLGK Trigger: CTTACCAAGAAACTTAAGTGTTTTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCATTAAAATCAACGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR GCA 72 bp | TGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATaGCAGGACAGTCCAGATCCAACGGCTACAGAACCC | + |
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Preference number: 3 (lower is better) Translates to: WSPPITHRGRVR*QDSPDPTATEP Trigger: GGGTTCTGTAGCCGTTGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR CAA 90 bp | ACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATCCAACGGCTACAGAACCGCAAGAATGTGGGATTaGGCATCAAAACTCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: TQRESSMPGQSRSNGYRTARMWD*ASKLLS Trigger: GCTCAGGAGTTTTGATGCCAAATCCCACATTCTTGC...GGTTCTGTAGCCGTTGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR CAA 90 bp | TGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATGAATTTGAAACTGGCTaGCCATTTTGCCAGGATAAC | + |
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Preference number: 3 (lower is better) Translates to: WSPPITHRGRVRCQDSPDEFETG*PFCQDN Trigger: GTTATCCTGGCAAAATGGCAAGCCAGTTTCAAATTC...ATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR CAA 90 bp | CTTTTGATCCCATATATCAGATGTTCTAAGACTGTTAGAACACCTCGTCCAAAGTTGGCCAGGTTGGTCTaGAACTCCTCACCTCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: LLIPYIRCSKTVRTPRPKLARLV*NSSPQV Trigger: CACTTGAGGTGAGGAGTTCAAGACCAACCTGGCCAA...CTTTGGACGAGGTGTTCTAACAGTCTTAGAACATCTGATATATGGGATCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR CCA 72 bp | ACACTTTATACTTCAGTCACCCAAAACAACAGCTTGTaGTCTCCTCCAATTACACACAGAGGGAGAGTTCGA | + |
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Preference number: 3 (lower is better) Translates to: TLYTSVTQNNSL*SPPITHRGRVR Trigger: TCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCACAAGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR CAA 90 bp | GTGAATCTAAGGTACAGAAAACACTTTATACTTCAGTCACCCAAAACAACAGCTTACCATTTAAACCTGTaGAGTGACCTGGAGTTATCT | + |
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Preference number: 3 (lower is better) Translates to: VNLRYRKHFILQSPKTTAYHLNL*SDLELS Trigger: AGATAACTCCAGGTCACTCAACAGGTTTAAATGGTA...AGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTTCTGTACCTTAGATTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR-3UTR CAA 90 bp | GAATCTAAGGTACAGAAAACACTTTATACTTCAGTCACCCAAAACAACAGCTTGGATCATAAAACCGGATaGTTCCATTCTTCTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ESKVQKTLYTSVTQNNSLDHKTG*FHSSLQ Trigger: TTGCAGAGAAGAATGGAACAATCCGGTTTTATGATC...CAAGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTTCTGTACCTTAGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| 3UTR GCA 72 bp | ACAAGAGGAAATGAAGCTTCAAAAAGGGCATTAACTTaGAGGAATGGGCAGTTTGTCAAAATGTATTGGATT | + |
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Preference number: 3 (lower is better) Translates to: TRGNEASKRALT*RNGQFVKMYWI Trigger: AATCCAATACATTTTGACAAACTGCCCATTCCTGCAAGTTAATGCCCTTTTTGAAGCTTCATTTCCTCTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR TCA 72 bp | GTGACTGACAAGCAGAACCATAATTTTATATGCTTCTaGCTGTACCATGATGTATCCCAAAAATGTGATACA | + |
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Preference number: 3 (lower is better) Translates to: VTDKQNHNFICF*LYHDVSQKCDT Trigger: TGTATCACATTTTTGGGATACATCATGGTACAGTCAGAAGCATATAAAATTATGGTTCTGCTTGTCAGTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR CCA 90 bp | ATGATCTTTGAGAGGGTGAACACAGTTCCATTGCCAACAGGTCCCATCTCAAAACAGGCTGGTCTTCCTTaGGGGCTGCCGCGACGCGCT | + |
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Preference number: 4 (lower is better) Translates to: MIFERVNTVPLPTGPISKQAGLP*GLPRRA Trigger: AGCGCGTCGCGGCAGCCCCCAAGGAAGACCAGCCTG...TTTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR TCA 90 bp | ATGATCTTTGAGAGGGTGAACACAGTTCCATTGCCAACAGGTCCCATCTCAAAACGGCTACAGAACCCATaGGGATGGGCTGAGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: MIFERVNTVPLPTGPISKRLQNP*GWAEGV Trigger: GACACCCTCAGCCCATCCTCATGGGTTCTGTAGCCG...TTTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR GCA 90 bp | TGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATGCCAGCACACACTCATaGCAGGAGAATGAAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: WSPPITHRGRVRCQDSPDASTHS*QENEEQ Trigger: TTGTTCTTCATTCTCCTGGCATGAGTGTGTGCTGGC...ATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR GCA 90 bp | CTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATCCAAACTGGCTTGCCATTTTaGCAGGATAACCAGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLQLHTEGEFDARTVQIQTGLPF*QDNQWL Trigger: CAACCACTGGTTATCCTGGCAAAATGGCAAGCCAGT...TTGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR CCA 90 bp | CACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATCCAACGGCTACAGAACCAAAACAACAGCTTGTaGTCTCCTCCAATTACACAC | + |
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Preference number: 4 (lower is better) Translates to: HTEGEFDARTVQIQRLQNQNNSL*SPPITH Trigger: GTGTGTAATTGGAGGAGACCACAAGCTGTTGTTTTG...GTTCTGTAGCCGTTGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR CCA 90 bp | GGCATTAACTTGCAGGAATGGGCAGTTTGTCAAAATGTATTGGATTCTGTATGTCGACCAGAGGCAGGCTaGTCTTCCTTGGGGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GINLQEWAVCQNVLDSVCRPEAG*SSLGAA Trigger: GGCAGCCCCCAAGGAAGACCAGCCTGCCTCTGGTCG...ACATACAGAATCCAATACATTTTGACAAACTGCCCATTCCTGCAAGTTAATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR TCA 90 bp | TCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTTCGCCCAGGCTGCAGTaGAGTGGCACGATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SKTVRTPRPKESAYNKQGSPRLQ*SGTILA Trigger: AGCCAAGATCGTGCCACTTCACTGCAGCCTGGGCGA...ACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR CCA 90 bp | ATGATCTTTGAGAGGGTGAACACAGTTCCATTGCCAACAGGTCCCATCTCAAAACAGGCTGCAGTGAAGTaGCACGATCTTGGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: MIFERVNTVPLPTGPISKQAAVK*HDLGSL Trigger: CAGTGAGCCAAGATCGTGCCACTTCACTGCAGCCTG...TTTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR TCA 90 bp | TGTGAATCTAAGGTACAGAAAACACTTTATACTTCAGTCACCCAAAACAACAGCCGGCTACAGAACCCATaGGGATGGGCTGAGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: CESKVQKTLYTSVTQNNSRLQNP*GWAEGV Trigger: GACACCCTCAGCCCATCCTCATGGGTTCTGTAGCCG...GCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTTCTGTACCTTAGATTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR GCA 90 bp | AATAGCCTGTTGGGCCAAAAGATCATAAAACCGGATTGTTCCATTCTTCTCTGCAGAGGGAGAGTTCGATaGCAGGACAGTCCAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: NSLLGQKIIKPDCSILLCRGRVR*QDSPDP Trigger: TGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCT...GCAGAGAAGAATGGAACAATCCGGTTTTATGATCTTTTGGCCCAACAGGCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR GCA 90 bp | AATAGCCTGTTGGGCCAAAAGATCATAAAACCGGATTGTTCCATTCTTCTCTGCAAAGTCTCCTCAGGATaGCAGCACACACTCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: NSLLGQKIIKPDCSILLCKVSSG*QHTLMP Trigger: TGGCATGAGTGTGTGCTGGCATCCTGAGGAGACTTT...GCAGAGAAGAATGGAACAATCCGGTTTTATGATCTTTTGGCCCAACAGGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR GCA 90 bp | AACAACAGCTTGTGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGAATTTGAAACTGGCTTaGCATTTTGCCAGGATAACC | + |
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Preference number: 4 (lower is better) Translates to: NNSLWSPPITHRGRVRCQNLKLA*HFARIT Trigger: GGTTATCCTGGCAAAATGGCAAGCCAGTTTCAAATT...CTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCACAAGCTGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR GCA 90 bp | CATATATCAGATGTTCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTAGAGGGAGAGTTCGATaGCAGGACAGTCCAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: HISDVLRLLEHLVQRNLRRGRVR*QDSPDP Trigger: TGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCT...ACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGAACATCTGATATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR CCA 90 bp | AACAACAGCTTGTGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGAGATTGGCAAGAATGTaGGATTTGGCATCAAAACTC | + |
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Preference number: 4 (lower is better) Translates to: NNSLWSPPITHRGRVRCQRLARM*DLASKL Trigger: GAGTTTTGATGCCAAATCCCACATTCTTGCCAATCT...CTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCACAAGCTGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR CCA 90 bp | CATATATCAGATGTTCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTGAAGTGGCACGATCTTaGCTCACTGTAACCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: HISDVLRLLEHLVQRNLREVARS*LTVTSA Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGTGCCACTTC...ACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGAACATCTGATATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR TCA 90 bp | ATGATCTTTGAGAGGGTGAACACAGTTCCATTGCCAACAGGTCCCATCTCAAAAACGTACACGTGCCAATaGCCACATAATTATTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: MIFERVNTVPLPTGPISKTYTCQ*PHNYCH Trigger: GTGGCAATAATTATGTGGTCATTGGCACGTGTACGT...TTTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR TCA 90 bp | TCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTCAAATCCTGCAGGTGTaGTCGTCACTCACACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SKTVRTPRPKESAYNKQGQILQV*SSLTLA Trigger: TGCAAGTGTGAGTGACGATCACACCTGCAGGATTTG...ACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR CAA 72 bp | GCTGAGGGTGTCCTAAATGATGAATTTGAAACTGGCTaGCCATTTTGCCAGGATAACCAGTGGTTGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: AEGVLNDEFETG*PFCQDNQWLQT Trigger: TGTTTGCAACCACTGGTTATCCTGGCAAAATGGCAAGCCAGTTTCAAATTCATCATTTAGGACACCCTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
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| CDS-3UTR TCA 90 bp | ACAAGAGGAAATGAAGCTTCAAAAAGGGCATTAACTTGCAGGAATGGGCAGTTTCTATGCCATCAACCCTaGCTCCATGGTGAAATGTTC | + |
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Preference number: 4 (lower is better) Translates to: TRGNEASKRALTCRNGQFLCHQP*LHGEMF Trigger: GAACATTTCACCATGGAGTCAGGGTTGATGGCATAG...AAACTGCCCATTCCTGCAAGTTAATGCCCTTTTTGAAGCTTCATTTCCTCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR GCA 90 bp | TTTTTCCTTAGTCATCTCTTCTCTGGAGGTGAGCTGCTGAGTCAATATGATTTTAAAGTCTCCTCAGGATaGCAGCACACACTCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: FFLSHLFSGGELLSQYDFKVSSG*QHTLMP Trigger: TGGCATGAGTGTGTGCTGGCATCCTGAGGAGACTTT...AAAATCATATTGACTCAGCAGCTCACCTCCAGAGAAGAGATGACTAAGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR GCA 90 bp | GGCATTAACTTGCAGGAATGGGCAGTTTGTCAAAATGTATTGGATTCTGTATGTACTGGCTTGCCATTTTaGCAGGATAACCAGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GINLQEWAVCQNVLDSVCTGLPF*QDNQWL Trigger: CAACCACTGGTTATCCTGGCAAAATGGCAAGCCAGT...ACATACAGAATCCAATACATTTTGACAAACTGCCCATTCCTGCAAGTTAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| CDS-3UTR CCA 90 bp | GGCATTAACTTGCAGGAATGGGCAGTTTGTCAAAATGTATTGGATTCTGTATGTATCAAGTCTAGTCTCTaGGCTCCAAGCTATGCCATC | + |
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Preference number: 4 (lower is better) Translates to: GINLQEWAVCQNVLDSVCIKSSL*APSYAI Trigger: GATGGCATAGCTTGGAGCCCAGAGACTAGACTTGAT...ACATACAGAATCCAATACATTTTGACAAACTGCCCATTCCTGCAAGTTAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
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| 3UTR CAA 72 bp | AAAACACTTTATACTTCAGTCACCCAAAACAACAGCTaGTGGTCTCCTCCAATTACACACAGAGGGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLYTSVTQNNS*WSPPITHRGRV Trigger: AACTCTCCCTCTGTGTGTAATTGGAGGAGACCACAAGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
||
| CDS-3UTR TCA 90 bp | CACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAAGTAGGCAGCATTTCTTaGGGCATCTTGCTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLVQRNLRIINRVEQYNQVGSIS*GILLHL Trigger: AAGATGAAGCAAGATGCCTCAAGAAATGCTGCCTAC...TTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR TCA 90 bp | TCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTCGAAGTGTTTTATACTaGATGCCTTCAACGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKTVRTPRPKESAYNKQGRSVLY*MPSTSA Trigger: AGCAGACGTTGAAGGCATTCAGTATAAAACACTTCG...ACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR TCA 90 bp | TCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTACCCTGACTCCATGGTaGAATGTTCGAAGTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SKTVRTPRPKESAYNKQGTLTPW*NVRSVL Trigger: TAAAACACTTCGAACATTTCACCATGGAGTCAGGGT...ACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR TCA 90 bp | CACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAAGATTACTGGAGGCAATaGATCAAGTCTAGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLVQRNLRIINRVEQYNQDYWRQ*IKSSLW Trigger: CCAGAGACTAGACTTGATTCATTGCCTCCAGTAATC...TTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR TCA 90 bp | CATATATCAGATGTTCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTATTGGATTCTGTATGTaGCTGACAAGCAGAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: HISDVLRLLEHLVQRNLRIGFCM*LTSRTI Trigger: TATGGTTCTGCTTGTCAGTCACATACAGAATCCAAT...ACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGAACATCTGATATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR GCA 90 bp | TCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTATCGTCACTCACACTTaGAATTTCTTGGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKTVRTPRPKESAYNKQGIVTHT*NFLAFF Trigger: AAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGAT...ACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR GCA 90 bp | GTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAATCACATCCAAGTTCCAAATCCTaGAGGTGTGATCGTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQRNLRIINRVEQYNQSHPSSKS*RCDRHS Trigger: TGAGTGACGATCACACCTGCAGGATTTGGAACTTGG...ATGTGATTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR GCA 90 bp | GTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAATCACATGCTCACTGTAACCTCTaGCTTCCAGGTTCAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQRNLRIINRVEQYNQSHAHCNL*LPGSSD Trigger: ATCACTTGAACCTGGAAGGCAGAGGTTACAGTGAGC...ATGTGATTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR TCA 90 bp | CTTTTGATCCCATATATCAGATGTTCTAAGACTGTTAGAACACCTCGTCCAAAGGATTTTAATGATCTTTaGGAGGGTGAACACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLIPYIRCSKTVRTPRPKDFNDL*EGEHSS Trigger: GGAACTGTGTTCACCCTCTCAAAGATCATTAAAATC...CTTTGGACGAGGTGTTCTAACAGTCTTAGAACATCTGATATATGGGATCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR GCA 90 bp | CATATATCAGATGTTCTAAGACTGTTAGAACACCTCGTCCAAAGGAATCTGCGTGTGTTTTATACTGAATaGCTTCAACGTCTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HISDVLRLLEHLVQRNLRVFYTE*LQRLLL Trigger: AAGAAGCAGACGTTGAAGGCATTCAGTATAAAACAC...ACGCAGATTCCTTTGGACGAGGTGTTCTAACAGTCTTAGAACATCTGATATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CCA 90 bp | GGCATTAACTTGCAGGAATGGGCAGTTTGTCAAAATGTATTGGATTCTGTATGTTTTCTTGGCCTTCTTTaGGATCAAACACCAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GINLQEWAVCQNVLDSVCFLGLL*DQTPNH Trigger: ATGGTTTGGTGTTTGATCCCAAAGAAGGCCAAGAAA...ACATACAGAATCCAATACATTTTGACAAACTGCCCATTCCTGCAAGTTAATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CCA 90 bp | CACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAAACACTTGCAATTTCTTaGCCTTCTTTGGGATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLVQRNLRIINRVEQYNQTLAIS*PSLGSN Trigger: GTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGT...TTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR TCA 90 bp | CTTTTGATCCCATATATCAGATGTTCTAAGACTGTTAGAACACCTCGTCCAAAGCTTTACAAGAGGAAATaGAGCTTCAAAAAGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLIPYIRCSKTVRTPRPKLYKRK*SFKKGI Trigger: AATGCCCTTTTTGAAGCTTCATTTCCTCTTGTAAAG...CTTTGGACGAGGTGTTCTAACAGTCTTAGAACATCTGATATATGGGATCAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CCA 90 bp | GTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAATCACATCAAAACAACAGCTTGTaGTCTCCTCCAATTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: VQRNLRIINRVEQYNQSHQNNSL*SPPITH Trigger: GTGTGTAATTGGAGGAGACCACAAGCTGTTGTTTTG...ATGTGATTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| 3UTR CAA 72 bp | ATTTTAATGATCTTTGAGAGGGTGAACACAGTTCCATaGCCAACAGGTCCCATCTCAAAAACACTTAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILMIFERVNTVP*PTGPISKTLKF Trigger: AAACTTAAGTGTTTTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCATTAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCTTAGTCATCTCTTCTCTGGAGGTGAGCTGCTGAGTCAATATGATTTTTTTCTTGAGGCATCTTaGTTCATCTTGTATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSHLFSGGELLSQYDFFLEAS*FILYVK Trigger: TTTGACATACAAGATGAAGCAAGATGCCTCAAGAAA...AAAATCATATTGACTCAGCAGCTCACCTCCAGAGAAGAGATGACTAAGGAAAAA 37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR GCA 90 bp | GTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAATCACATAATTTGAAACTGGCTTaGCATTTTGCCAGGATAACC | + |
|
Preference number: 4 (lower is better) Translates to: VQRNLRIINRVEQYNQSHNLKLA*HFARIT Trigger: GGTTATCCTGGCAAAATGGCAAGCCAGTTTCAAATT...ATGTGATTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CCA 90 bp | AATCTAAGGTACAGAAAACACTTTATACTTCAGTCACCCAAAACAACAGCTTGTATAGTAGTGGTAGATTaGCAAGAATGTGGGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLRYRKHFILQSPKTTACIVVVD*QECGIW Trigger: CCAAATCCCACATTCTTGCCAATCTACCACTACTAT...ACAAGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTTCTGTACCTTAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
||
| CDS-3UTR CAA 90 bp | TGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATAACAAAATGAGCTGTTaGCACTCCTTCCAAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WSPPITHRGRVRCQDSPDNKMSC*HSFQVP Trigger: TGGAACTTGGAAGGAGTGCAAACAGCTCATTTTGTT...ATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATCCAAGAATTTGAAACTGGCTaGCCATTTTGCCAGGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQLHTEGEFDARTVQIQEFETG*PFCQDN Trigger: GTTATCCTGGCAAAATGGCAAGCCAGTTTCAAATTC...TTGGATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
||
| CDS-3UTR CAA 90 bp | TGGTCTCCTCCAATTACACACAGAGGGAGAGTTCGATGCCAGGACAGTCCAGATGATCATAAAACCGGATaGTTCCATTCTTCTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WSPPITHRGRVRCQDSPDDHKTG*FHSSLQ Trigger: TTGCAGAGAAGAATGGAACAATCCGGTTTTATGATC...ATCTGGACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547269.1 |
||
| CDS-3UTR CAA 90 bp | ATGATCTTTGAGAGGGTGAACACAGTTCCATTGCCAACAGGTCCCATCTCAAAAGTGAACACAGTTCCATaGCCAACAGGTCCCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MIFERVNTVPLPTGPISKVNTVP*PTGPIS Trigger: TGAGATGGGACCTGTTGGCAATGGAACTGTGTTCAC...TTTTGAGATGGGACCTGTTGGCAATGGAACTGTGTTCACCCTCTCAAAGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | CCTGTTGGGCCAAAAGATCATAAAACCGGATTGTTCCATTCTTCTCTGCAACCAGCAAGAATGTGGGATTaGGCATCAAAACTCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PVGPKDHKTGLFHSSLQPARMWD*ASKLLS Trigger: GCTCAGGAGTTTTGATGCCAAATCCCACATTCTTGC...TGGTTGCAGAGAAGAATGGAACAATCCGGTTTTATGATCTTTTGGCCCAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547269.1 |
||
| CDS GCA 90 bp | TCCTTCCAAGTTCCAAATCCTGCAGGTGTGATCGTCACTCACACTTaGAATTTCTTGGCCTTCTTTGGGATCAAACACCAAACCATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SFQVPNPAGVIVTHT*NFLAFFGIKHQTIN Trigger: ATTAATGGTTTGGTGTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGATCACACCTGCAGGATTTGGAACTTGGAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000251074.5 ENST00000543021.5 ENST00000551200.5 ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | AGGTACAGAAAACACTTTATACTTCAGTCACCCAAAACAACAGCTTGTGGTCTCACCCAAAACAACAGCTaGTGGTCTCCTCCAATTACA | + |
|
Preference number: 5 (lower is better) Translates to: RYRKHFILQSPKTTACGLTQNNS*WSPPIT Trigger: TGTAATTGGAGGAGACCACAAGCTGTTGTTTTGGGT...GAGACCACAAGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTTCTGTACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547269.1 |
||
| CDS-3UTR CAA 90 bp | GTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAATCACATTTGGCCAGGTTGGTCTaGAACTCCTCACCTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQRNLRIINRVEQYNQSHLARLV*NSSPQV Trigger: CACTTGAGGTGAGGAGTTCAAGACCAACCTGGCCAA...ATGTGATTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | GGCATTAACTTGCAGGAATGGGCAGTTTGTCAAAATGTATTGGATTCTGTATGTTGTAGGCAGCATTTCTaGAGGCATCTTGCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GINLQEWAVCQNVLDSVCCRQHF*RHLASS Trigger: AGATGAAGCAAGATGCCTCAAGAAATGCTGCCTACA...ACATACAGAATCCAATACATTTTGACAAACTGCCCATTCCTGCAAGTTAATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | CACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAAACCCAAAACAACAGCTaGTGGTCTCCTCCAATTACA | + |
|
Preference number: 5 (lower is better) Translates to: HLVQRNLRIINRVEQYNQTQNNS*WSPPIT Trigger: TGTAATTGGAGGAGACCACAAGCTGTTGTTTTGGGT...TTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS GCA 90 bp | TCTCTTATTTTGAGGATAACTGCAGGTGTGATCGTCACTCACACTTaGAATTTCTTGGCCTTCTTTGGGATCAAACACCAAACCATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLILRITAGVIVTHT*NFLAFFGIKHQTIN Trigger: ATTAATGGTTTGGTGTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGATCACACCTGCAGTTATCCTCAAAATAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551744.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCTTAGTCATCTCTTCTCTGGAGGTGAGCTGCTGAGTCAATATGATTTTATTTCTTGGCCTTCTTaGGGATCAAACACCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: FFLSHLFSGGELLSQYDFISWPS*GSNTKP Trigger: TGGTTTGGTGTTTGATCCCAAAGAAGGCCAAGAAAT...AAAATCATATTGACTCAGCAGCTCACCTCCAGAGAAGAGATGACTAAGGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | CACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAACACACTTGCAATTTCTaGGCCTTCTTTGGGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLVQRNLRIINRVEQYNQHTCNF*AFFGIK Trigger: TTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTG...TTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | GGCATTAACTTGCAGGAATGGGCAGTTTGTCAAAATGTATTGGATTCTGTATGTAACAAAATGAGCTGTTaGCACTCCTTCCAAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GINLQEWAVCQNVLDSVCNKMSC*HSFQVP Trigger: TGGAACTTGGAAGGAGTGCAAACAGCTCATTTTGTT...ACATACAGAATCCAATACATTTTGACAAACTGCCCATTCCTGCAAGTTAATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCTTAGTCATCTCTTCTCTGGAGGTGAGCTGCTGAGTCAATATGATTTTGAATTTGAAACTGGCTaGCCATTTTGCCAGGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: FFLSHLFSGGELLSQYDFEFETG*PFCQDN Trigger: GTTATCCTGGCAAAATGGCAAGCCAGTTTCAAATTC...AAAATCATATTGACTCAGCAGCTCACCTCCAGAGAAGAGATGACTAAGGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | CACCTCGTCCAAAGGAATCTGCGTATAATAAACAGGGTTGAGCAATATAATCAAGCAGGAATGGGCAGTTaGTCAAAATGTATTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: HLVQRNLRIINRVEQYNQAGMGS*SKCIGF Trigger: GAATCCAATACATTTTGACAAACTGCCCATTCCTGC...TTGATTATATTGCTCAACCCTGTTTATTATACGCAGATTCCTTTGGACGAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS CCA 90 bp | CAACATTGCACAGATCCAAGATTTCCTCTTTTGCACTGTCCTTTCTaGGTTACTCCCAGAGTAAATCTGCATAGCAAGTTTATGTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: QHCTDPRFPLLHCPF*VTPRVNLHSKFMLY Trigger: ATATAACATAAACTTGCTATGCAGATTTACTCTGGGAGTAACCCAGAAAGGACAGTGCAAAAGAGGAAATCTTGGATCTGTGCAATGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551200.5 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCTTAGTCATCTCTTCTCTGGAGGTGAGCTGCTGAGTCAATATGATTTTGATCATAAAACCGGATaGTTCCATTCTTCTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FFLSHLFSGGELLSQYDFDHKTG*FHSSLQ Trigger: TTGCAGAGAAGAATGGAACAATCCGGTTTTATGATC...AAAATCATATTGACTCAGCAGCTCACCTCCAGAGAAGAGATGACTAAGGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000552283.6 |
||
| CDS-3UTR CAA 90 bp | AATCTAAGGTACAGAAAACACTTTATACTTCAGTCACCCAAAACAACAGCTTGTTACCATTTAAACCTGTaGAGTGACCTGGAGTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: NLRYRKHFILQSPKTTACYHLNL*SDLELS Trigger: AGATAACTCCAGGTCACTCAACAGGTTTAAATGGTA...ACAAGCTGTTGTTTTGGGTGACTGAAGTATAAAGTGTTTTCTGTACCTTAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547269.1 |
||
| CDS CAA 90 bp | CCAGCACACACTCATGCCAGGAGAATGAAGAACAAAATGAGCTGTTaGCACTCCTTCCAAGTTCCAAATCCTGCAGGTGTGATCGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PAHTHARRMKNKMSC*HSFQVPNPAGVIVT Trigger: AGTGACGATCACACCTGCAGGATTTGGAACTTGGAAGGAGTGCAAACAGCTCATTTTGTTCTTCATTCTCCTGGCATGAGTGTGTGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000251074.5 ENST00000543021.5 ENST00000551200.5 ENST00000552283.6 |
||
| CDS GCA 72 bp | GTTCCAAATCCTGCAGGTGTGATCGTCACTCACACTTaGAATTTCTTGGCCTTCTTTGGGATCAAACACCAA | + |
|
Preference number: 6 (lower is better) Translates to: VPNPAGVIVTHT*NFLAFFGIKHQ Trigger: TTGGTGTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGATCACACCTGCAGGATTTGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000251074.5 ENST00000543021.5 ENST00000551200.5 ENST00000552283.6 |
||
| CDS CAA 72 bp | AGTTCCAAATCCTGCAGGTGTGATCGTCACTCACACTaGCAATTTCTTGGCCTTCTTTGGGATCAAACACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSKSCRCDRHSH*QFLGLLWDQTP Trigger: TGGTGTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGATCACACCTGCAGGATTTGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000251074.5 ENST00000543021.5 ENST00000551200.5 ENST00000552283.6 |
||
| CDS GCA 72 bp | TTGAGGATAACTGCAGGTGTGATCGTCACTCACACTTaGAATTTCTTGGCCTTCTTTGGGATCAAACACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LRITAGVIVTHT*NFLAFFGIKHQ Trigger: TTGGTGTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGATCACACCTGCAGTTATCCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551744.2 |
||
| CDS CAA 72 bp | CCTGCAGGTGTGATCGTCACTCACACTTGCAATTTCTaGGCCTTCTTTGGGATCAAACACCAAACCATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: PAGVIVTHTCNF*AFFGIKHQTIN Trigger: ATTAATGGTTTGGTGTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGATCACACCTGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000251074.5 ENST00000543021.5 ENST00000551200.5 ENST00000552283.6 |
||
| CDS CAA 72 bp | TTTGAGGATAACTGCAGGTGTGATCGTCACTCACACTaGCAATTTCTTGGCCTTCTTTGGGATCAAACACCA | + |
|
Preference number: 6 (lower is better) Translates to: FEDNCRCDRHSH*QFLGLLWDQTP Trigger: TGGTGTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGATCACACCTGCAGTTATCCTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551744.2 |
||
| CDS TCA 72 bp | CGTCTGCTTCTTCTTCCTGAAACGTACACGTGCCAATaGCCACATAATTATTGCCACCATATGCAATTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLLLLPETYTCQ*PHNYCHHMQLG Trigger: ACCTAATTGCATATGGTGGCAATAATTATGTGGTCATTGGCACGTGTACGTTTCAGGAAGAAGAAGCAGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000251074.5 ENST00000543021.5 ENST00000551200.5 ENST00000551744.2 ENST00000552283.6 |
||
| CDS CAA 72 bp | ACTGCAGGTGTGATCGTCACTCACACTTGCAATTTCTaGGCCTTCTTTGGGATCAAACACCAAACCATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: TAGVIVTHTCNF*AFFGIKHQTIN Trigger: ATTAATGGTTTGGTGTTTGATCCCAAAGAAGGCCAAGAAATTGCAAGTGTGAGTGACGATCACACCTGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551744.2 |
||
| CDS GCA 72 bp | CTCCATGGTGAAATGTTCGAAGTGTTTTATACTGAATaGCTTCAACGTCTGCTTCTTCTTCCTGAAACGTAC | + |
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Preference number: 6 (lower is better) Translates to: LHGEMFEVFYTE*LQRLLLLPETY Trigger: GTACGTTTCAGGAAGAAGAAGCAGACGTTGAAGGCATTCAGTATAAAACACTTCGAACATTTCACCATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000251074.5 ENST00000543021.5 ENST00000551200.5 ENST00000551744.2 ENST00000552283.6 |
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| CDS CCA 72 bp | ACAGATCCAAGATTTCCTCTTTTGCACTGTCCTTTCTaGGTTACTCCCAGAGTAAATCTGCATAGCAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: TDPRFPLLHCPF*VTPRVNLHSKF Trigger: AAACTTGCTATGCAGATTTACTCTGGGAGTAACCCAGAAAGGACAGTGCAAAAGAGGAAATCTTGGATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551200.5 |
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| CDS CAA 90 bp | CCACATGCACATAATCTTCACAATCCACAGTGTAGGCAGCATTTCTaGAGGCATCTTGCTTCATCTTGTATGTCAAAATTCAAGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: PHAHNLHNPQCRQHF*RHLASSCMSKFKQL Trigger: CAACTGCTTGAATTTTGACATACAAGATGAAGCAAGATGCCTCAAGAAATGCTGCCTACACTGTGGATTGTGAAGATTATGTGCATGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000251074.5 ENST00000543021.5 ENST00000548994.1 ENST00000550459.1 ENST00000551200.5 ENST00000551744.2 ENST00000552283.6 |
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| CDS CAA 90 bp | TTTTCCAATATAAGTCAACATTGCACAGATCCAAGATTTCCTCTTTaGCACTGTCCTTTCTGGGTTACTCCCAGAGTAAATCTGCATAGC | + |
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Preference number: 6 (lower is better) Translates to: FSNISQHCTDPRFPL*HCPFWVTPRVNLHS Trigger: GCTATGCAGATTTACTCTGGGAGTAACCCAGAAAGGACAGTGCAAAAGAGGAAATCTTGGATCTGTGCAATGTTGACTTATATTGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551200.5 |
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| CDS TCA 72 bp | ATGGAACTTGAAGGTTCTGAAACGTACACGTGCCAATaGCCACATAATTATTGCCACCATATGCAATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: MELEGSETYTCQ*PHNYCHHMQLG Trigger: ACCTAATTGCATATGGTGGCAATAATTATGTGGTCATTGGCACGTGTACGTTTCAGAACCTTCAAGTTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548994.1 |
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| CDS TCA 72 bp | CTTCCTTTACTTAGTTTTCTCTCAAGACAAGAGGCATaGAACTGGGTGCAATGGAACTTGAAGGTTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LPLLSFLSRQEA*NWVQWNLKVLK Trigger: TTTCAGAACCTTCAAGTTCCATTGCACCCAGTTTCATGCCTCTTGTCTTGAGAGAAAACTAAGTAAAGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548994.1 |
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| CDS CAA 72 bp | ATAAGTCAACATTGCACAGATCCAAGATTTCCTCTTTaGCACTGTCCTTTCTGGGTTACTCCCAGAGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: ISQHCTDPRFPL*HCPFWVTPRVN Trigger: ATTTACTCTGGGAGTAACCCAGAAAGGACAGTGCAAAAGAGGAAATCTTGGATCTGTGCAATGTTGACTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551200.5 |
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