RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUP214 (Homo sapiens)

Ensembl gene IDs: ENSG00000126883

Ensembl transcript IDs: ENST00000359428.10, ENST00000411637.6, ENST00000451030.5, ENST00000453861.6, ENST00000465486.6, ENST00000470765.5, ENST00000476004.5, ENST00000483497.6, ENST00000489260.1, ENST00000496921.2, ENST00000498010.2, ENST00000524578.5, ENST00000525384.1, ENST00000525561.1, ENST00000525980.5, ENST00000526346.5, ENST00000526412.1, ENST00000528114.1, ENST00000528406.1, ENST00000529286.1, ENST00000530491.1, ENST00000530630.1, ENST00000530843.1, ENST00000530863.1, ENST00000531584.1, ENST00000531600.1, ENST00000531929.5, ENST00000650694.1, ENST00000651022.1, ENST00000651334.1, ENST00000651639.1, ENST00000652454.1

Found 1971 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACG +
Preference number: 1 (lower is better)
Translates to: EEAEDAVGPRDRKAC*HALSFASHQNPGQT
Trigger: CGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
3UTR TCA 90 bp ACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTaGGACCACGGCACATTCGATGCTGTTTATCAACACCCGACGCTG +
Preference number: 1 (lower is better)
Translates to: TSIQPLPYVEGARSK*DHGTFDAVYQHPTL
Trigger: CAGCGTCGGGTGTTGATAAACAGCATCGAATGTGCCGTGGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 90 bp CAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTaGAGGGCGCTAGGTCCAAGTGAGACCACGGCACATTCGATGCTG +
Preference number: 1 (lower is better)
Translates to: QPQKDDPPAFNLFPM*RALGPSETTAHSML
Trigger: CAGCATCGAATGTGCCGTGGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 90 bp AAAGCGCTATGGCTGCTTCTGAAACTCAACTGCTGCTGGCATGAGTaGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATG +
Preference number: 1 (lower is better)
Translates to: KALWLLLKLNCCWHE*LPLPPLNRRVRPWM
Trigger: CATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 90 bp GGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTaGAAAGCGCTATGGCTGCTTCTGAAACTCAACTGCTGCTGGCAT +
Preference number: 1 (lower is better)
Translates to: GAALSCLTLATIVLY*KALWLLLKLNCCWH
Trigger: ATGCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 90 bp CGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTaGAACTCAACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCAC +
Preference number: 1 (lower is better)
Translates to: RWLLLYCTEKRYGCF*NSTAAGMSGFLCLH
Trigger: GTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR GCA 90 bp AGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTaGACTGTGGTTAGTAGACACTGGGTAGGTGTGGCTACCAATGTC +
Preference number: 1 (lower is better)
Translates to: SSVCLHTSWVYPRAI*TVVSRHWVGVATNV
Trigger: GACATTGGTAGCCACACCTACCCAGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 90 bp CTGCTAGTGTTGTCTGGCAACAGCAGTGTCTGTCTTCACACTTCCTaGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGG +
Preference number: 1 (lower is better)
Translates to: LLVLSGNSSVCLHTS*VYPRAICTVVSRHW
Trigger: CCAGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTTGCCAGACAACACTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 90 bp CCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGCCTaGAAGAGAAATTCTTACATCTGTTTTCAATGCGAGACGGTCCTT +
Preference number: 1 (lower is better)
Translates to: PAAHDPSQSTVRFWA*KRNSYICFQCETVL
Trigger: AAGGACCGTCTCGCATTGAAAACAGATGTAAGAATTTCTCTTTCAGGCCCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 90 bp AAAAGAACAAGGAGAGGAGATAACCAAGTTTCAGCCTCAAAAAGATaGCCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGG +
Preference number: 1 (lower is better)
Translates to: KRTRRGDNQVSASKR*PTSIQPLPYVEGAR
Trigger: CCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACTTGGTTATCTCCTCTCCTTGTTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 90 bp TCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATaGCTAAAAGAACAAGGAGAGGAGATAACCAAGTTTCAGCCTCAA +
Preference number: 1 (lower is better)
Translates to: STQSQSASLDGPDTQ*LKEQGEEITKFQPQ
Trigger: TTGAGGCTGAAACTTGGTTATCTCCTCTCCTTGTTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 90 bp GCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGATCTaGAAAAACCCACATACGTTCTGTACGGAAACAGACTGTTTAATA +
Preference number: 1 (lower is better)
Translates to: ASQSHRNGAIFLAVI*KNPHTFCTETDCLI
Trigger: TATTAAACAGTCTGTTTCCGTACAGAACGTATGTGGGTTTTTTCAGATCACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 90 bp AAGAGAAATTCTTACATCTGTTTTCAATGCGAGACGGTCCTTGTTTaGTGGCAACTATCTAGGATGTTACAGGCCTCAAAGATACTGCAT +
Preference number: 1 (lower is better)
Translates to: KRNSYICFQCETVLV*WQLSRMLQASKILH
Trigger: ATGCAGTATCTTTGAGGCCTGTAACATCCTAGATAGTTGCCATCAAACAAGGACCGTCTCGCATTGAAAACAGATGTAAGAATTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDASRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
3UTR-3UTR TCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGSRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
3UTR-3UTR TCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 2 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
3UTR-3UTR CCA 90 bp TGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCACAGCCACCAAAACCCTaGACAGACGAGTTATTTGAC +
Preference number: 2 (lower is better)
Translates to: WSQGSKGLLTRPQLRQPPQPPKP*TDELFD
Trigger: GTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG...TGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
3UTR-3UTR TCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCATCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPSRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTATTTGACCCAAAGCTaGACCCTCCTGTGCCTGATC +
Preference number: 2 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAYLTQS*TLLCLI
Trigger: GATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
3UTR-3UTR TCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
3UTR-3UTR TCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGGCGCTAGGTCCAAGTaGGACCACGGCACATTCGAT +
Preference number: 2 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTGARSK*DHGTFD
Trigger: ATCGAATGTGCCGTGGTCTCACTTGGACCTAGCGCC...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR TCA 90 bp TGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCATATTTGACCCAAAGCTaGACCCTGAAAAGCAGAATA +
Preference number: 2 (lower is better)
Translates to: WSQGSKGLLTRPQLRQPPYLTQS*TLKSRI
Trigger: TATTCTGCTTTTCAGGGTTCAGCTTTGGGTCAAATA...TGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
3UTR-3UTR TCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTCGCTATGGCTGCTTCTaGAACTCAACTGCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTRYGCF*NSTAAG
Trigger: GCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCG...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR CCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTTGCTGCTGGCATGAGTaGCTTCCTCTGCCTCCACTC +
Preference number: 2 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTCCWHE*LPLPPL
Trigger: GAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCA...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR TCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 2 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
3UTR-3UTR TCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTTTCTTGGCTGTGATCTaGAAAAACCCACATACGTTC +
Preference number: 2 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTFLAVI*KNPHTF
Trigger: GAACGTATGTGGGTTTTTTCAGATCACAGCCAAGAA...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR TCA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAATCACCAGATGATAACTaGCCGGATGCTGGTGTAGGC +
Preference number: 2 (lower is better)
Translates to: PEADGVEVTAVSILAVPESPDDN*PDAGVG
Trigger: GCCTACACCAGCATCCGGTCAGTTATCATCTGGTGA...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
3UTR-3UTR TCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR GCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTCTGAAACTCAACTGCTaGTGGCATGAGTGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTLKLNC*WHEWLP
Trigger: AGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAG...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR GCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTCTTCTGAAACTCAACTaGTGCTGGCATGAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTLLKLN*CWHEWL
Trigger: AAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAG...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR TCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCATTCTTGGCTGTGATCTaGAAAAACCCACATACGTTC +
Preference number: 2 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPFLAVI*KNPHTF
Trigger: GAACGTATGTGGGTTTTTTCAGATCACAGCCAAGAA...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR GCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGACCACGGCACATTCGATaGTGTTTATCAACACCCGAC +
Preference number: 2 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGPRHIR*CLSTPD
Trigger: GTCGGGTGTTGATAAACAGCATCGAATGTGCCGTGG...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp GAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCCAGCCACCAAAACCCT +
Preference number: 3 (lower is better)
Translates to: EDAVGPRDRKAC*HALSFASHQNP
Trigger: AGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
3UTR-3UTR CAA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGAAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 3 (lower is better)
Translates to: ERPADTPSASPATKTLDRKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
3UTR-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 3 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
3UTR-3UTR CAA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTCTTCTGATGCCATCCTaGAAGACACAGTGTTCTGGC +
Preference number: 3 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCLLMPS*KTQCSG
Trigger: GCCAGAACACTGTGTCTTCAAGGATGGCATCAGAAG...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 72 bp AGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTaGCTACTATTGTACTGTACTGAAAAGCGCTATGGC +
Preference number: 3 (lower is better)
Translates to: RPAKAQHCPASR*LLLYCTEKRYG
Trigger: GCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR CAA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 3 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR CAA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTTCGCAGAGTGCGTCCTaGGATGGTCCTGATACACAA +
Preference number: 3 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTSQSAS*DGPDTQ
Trigger: TTGTGTATCAGGACCATCCAAGGACGCACTCTGCGA...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 72 bp TGGCTGCTTCTGAAACTCAACTGCTGCTGGCATGAGTaGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGT +
Preference number: 3 (lower is better)
Translates to: WLLLKLNCCWHE*LPLPPLNRRVR
Trigger: ACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 72 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTaGAGGGCGCTAGGTCCAAGTGAGACCACGGCACAT +
Preference number: 3 (lower is better)
Translates to: KDDPPAFNLFPM*RALGPSETTAH
Trigger: ATGTGCCGTGGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 3 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
3UTR-3UTR CAA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGATCGTTCTGCTAGTGTaGTCTGGCAACAGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWIVLLV*SGNSSV
Trigger: GACACTGCTGTTGCCAGACAACACTAGCAGAACGAT...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp TTGGCTGTCCCTGAAGCTTTGTCACCAGATGATAACTaGCCGGATGCTGGTGTAGGCCCAGATGGCTTAAGG +
Preference number: 3 (lower is better)
Translates to: LAVPEALSPDDN*PDAGVGPDGLR
Trigger: CCTTAAGCCATCTGGGCCTACACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGGACAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526346.5
3UTR GCA 72 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTaGACTGTGGTTAGTAGACACTGGGTAGGTGTGGCT +
Preference number: 3 (lower is better)
Translates to: CLHTSWVYPRAI*TVVSRHWVGVA
Trigger: AGCCACACCTACCCAGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp TTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: FLGVCVLMATSV*TACSSISRGRS
Trigger: GCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
3UTR CCA 72 bp TACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTaGGTAGGTGTGGCTACCAATGTCACTGCCACATAC +
Preference number: 3 (lower is better)
Translates to: YPRAICTVVSRH*VGVATNVTATY
Trigger: GTATGTGGCAGTGACATTGGTAGCCACACCTACCCAGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 72 bp TTGTCTGGCAACAGCAGTGTCTGTCTTCACACTTCCTaGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGT +
Preference number: 3 (lower is better)
Translates to: LSGNSSVCLHTS*VYPRAICTVVS
Trigger: ACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTTGCCAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp CTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTaGAAAGCGCTATGGCTGCTTCTGAAACTCAACTGC +
Preference number: 3 (lower is better)
Translates to: LSCLTLATIVLY*KALWLLLKLNC
Trigger: GCAGTTGAGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp CTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTaGAACTCAACTGCTGCTGGCATGAGTGGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: LLYCTEKRYGCF*NSTAAGMSGFL
Trigger: GAGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CCA 72 bp TGTTGTCAAATCCAGCATCGTTCTGCTAGTGTTGTCTaGCAACAGCAGTGTCTGTCTTCACACTTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: CCQIQHRSASVV*QQQCLSSHFLG
Trigger: ACCCAGGAAGTGTGAAGACAGACACTGCTGTTGCCAGACAACACTAGCAGAACGATGCTGGATTTGACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp AGCCACAGAAACGGGGCAATCTTCTTGGCTGTGATCTaGAAAAACCCACATACGTTCTGTACGGAAACAGAC +
Preference number: 3 (lower is better)
Translates to: SHRNGAIFLAVI*KNPHTFCTETD
Trigger: GTCTGTTTCCGTACAGAACGTATGTGGGTTTTTTCAGATCACAGCCAAGAAGATTGCCCCGTTTCTGTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp AGGAGAGGAGATAACCAAGTTTCAGCCTCAAAAAGATaGCCCACCAGCATTCAACCTCTTCCCTATGTGGAG +
Preference number: 3 (lower is better)
Translates to: RRGDNQVSASKR*PTSIQPLPYVE
Trigger: CTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACTTGGTTATCTCCTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp TCTTACATCTGTTTTCAATGCGAGACGGTCCTTGTTTaGTGGCAACTATCTAGGATGTTACAGGCCTCAAAG +
Preference number: 3 (lower is better)
Translates to: SYICFQCETVLV*WQLSRMLQASK
Trigger: CTTTGAGGCCTGTAACATCCTAGATAGTTGCCATCAAACAAGGACCGTCTCGCATTGAAAACAGATGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR TCA 72 bp CAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTaGACCCTGAAAAGCAGAATAAGAGTGAAGTTAAAG +
Preference number: 3 (lower is better)
Translates to: QNPGQTSYLTQS*TLKSRIRVKLK
Trigger: CTTTAACTTCACTCTTATTCTGCTTTTCAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR GCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTGCTGCGGCAGCTGCCTaGGGGGCTGAGATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCAAAAA*GAEMGW
Trigger: CCACCCCATCTCAGCCCCGCAGGCAGCTGCCGCAGC...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTGGCCATCTGCCGCCTaGGTGCTGCTGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGWPSAA*VLLRQL
Trigger: CAGCTGCCGCAGCAGCACTCAGGCGGCAGATGGCCA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCTGCGGCAGCTGCCTaGGGGGCTGAGATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAAAAAA*GAEMGW
Trigger: CCACCCCATCTCAGCCCCGCAGGCAGCTGCCGCAGC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp GGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTGGTGCGGTGCTGGCTaGCACTTGCCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: GLLTRPQLRQPPKPWTDEWCGAG*HLPKHG
Trigger: CCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCA...CTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGGCCCAAACACGGGCGTaGCAGAGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTAQTRA*QRGQWL
Trigger: CAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGC...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTGCCTCCCACGGCCTTaGCCACGGAACCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVCLPRP*PRNPGR
Trigger: GCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTGCCTCCCACGGCCTTaGCCACGGAACCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVCLPRP*PRNPGR
Trigger: GCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCGAAGCAGCCAACGCTaGCTCCCACGGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTRSSQR*LPRPCP
Trigger: TGGGCAAGGCCGTGGGAGGCAGCGTTGGCTGCTTCG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTGGACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PADTPSASPATKTLDRRVGPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTCC...AACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTGCCTGGGGAGAGCCTaGCTTTGCCGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGCLGRA*LCRWRG
Trigger: ACCCCTCCAGCGGCAAAGCCAGGCTCTCCCCAGGCA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGCCCAAACACGGGCGTaGCAGAGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACAQTRA*QRGQWL
Trigger: CAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCCCAAACACGGGCGTaGCAGAGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAAQTRA*QRGQWL
Trigger: CAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGCTGCCCAAACAGACTTaGTGCGGTGCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLTRPQLRQPPKPWTDELPKQT*CGAGCH
Trigger: GTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAG...CTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGCGTGCCGAGGGGCCTaGACCACTGCCTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAACRGA*TTASSS
Trigger: AGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGCGTGCCGAGGGGCCTaGACCACTGCCTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAACRGA*TTASSS
Trigger: AGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCGTGCCGAGGGGCCTaGACCACTGCCTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAACRGA*TTASSS
Trigger: AGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTGGCCATCTGCCGCCTaGGTGCTGCTGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVWPSAA*VLLRQL
Trigger: CAGCTGCCGCAGCAGCACTCAGGCGGCAGATGGCCA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTTGGCCATCTGCCGCCTaGGTGCTGCTGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTWPSAA*VLLRQL
Trigger: CAGCTGCCGCAGCAGCACTCAGGCGGCAGATGGCCA...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTGGCCATCTGCCGCCTaGGTGCTGCTGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVWPSAA*VLLRQL
Trigger: CAGCTGCCGCAGCAGCACTCAGGCGGCAGATGGCCA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: PADTPSASPATKTLDRRVDRKAC*HALSFA
Trigger: GGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATC...AACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGDRKAC*HALSFA
Trigger: GGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp ATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: IERPADTPSASPATKTLDDRKAC*HALSFA
Trigger: GGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATC...GTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATTGCCTCCCACGGCCTTaGCCACGGAACCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDCLPRP*PRNPGR
Trigger: GCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCA...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGCTGGATGGAAGGAGTaGGAACCACGGGGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAAGWKE*EPRGRA
Trigger: GGCACGCCCCCGTGGTTCGCACTCCTTCCATCCAGC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCATCTGCCGCCTGAGTaGTGCTGCGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVHLPPE*CCGSCL
Trigger: CAGGCAGCTGCCGCAGCAGCACTCAGGCGGCAGATG...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTGGTGCGGTGCTGGCTaGCACTTGCCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTWCGAG*HLPKHG
Trigger: CCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGCACTGCTCGCCGACTaGCCAAAGACTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPALLAD*PKTEAC
Trigger: GCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTSCAGS*SALSEH
Trigger: GTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGAAACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLKPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTT...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTGCCTGGGGAGAGCCTaGCTTTGCCGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPACLGRA*LCRWRG
Trigger: ACCCCTCCAGCGGCAAAGCCAGGCTCTCCCCAGGCA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTACTGCCTCCGTCCTaGCATCAGGGACCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAVLPPS*HQGPPW
Trigger: CCACGGGGGTCCCTGATGCCAGGACGGAGGCAGTAC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGCCCAAACACGGGCGTaGCAGAGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERAQTRA*QRGQWL
Trigger: CAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCACGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: KLRMRLVPGIERPADTPSRILLR*QLQCPL
Trigger: GAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCG...TGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGGGAGCCACTGGAATATaGAGGGGGCTCCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTGATGI*RGLPSD
Trigger: GTCACTGGGGAGCCCCCTTCATATTCCAGTGGCTCC...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGTGCGTCCGGCTGGCTTaGCTCTTTAGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLCVRLA*LFSGGC
Trigger: ACACCCTCCACTAAAGAGTCAAGCCAGCCGGACGCA...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR TCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGTGGGCTGCTAAACCCTaGGCTGCTGACCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLWAAKP*AADLWC
Trigger: ACACCACAGGTCAGCAGCTCAGGGTTTAGCAGCCCA...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCGACTGCCCAAAGACTaGGGCCTGCCCGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGRLPKD*GLPEGC
Trigger: ACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCACGACTGCCCAAAGACTaGGGCCTGCCCGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KLRMRLVPGIERPADTPSRLPKD*GLPEGC
Trigger: ACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCG...TGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGCCCCACTGGCCGAGCTaGATGGGTTTTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLPHWPS*MGFCWL
Trigger: CAGCCAACAAAAACCCATTCAGCTCGGCCAGTGGGG...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTTGTAAAGGCTGGGGCTaGACCGAATGCTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCCKGWG*TECWHP
Trigger: GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACA...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGATGTAAAGGCTGGGGCTaGACCGAATGCTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: ERPADTPSASPATKTLDRCKGWG*TECWHP
Trigger: GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACA...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: WSQGSKGLLTRPQLRQPPMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...TGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCGAAGCAGCCAACGCTaGCTCCCACGGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVRSSQR*LPRPCP
Trigger: TGGGCAAGGCCGTGGGAGGCAGCGTTGGCTGCTTCG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGGGAGAGCCTGGCTTTaGCGCTGGAGGGGTTATCCT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPGRAWL*RWRGYP
Trigger: AGGATAACCCCTCCAGCGGCAAAGCCAGGCTCTCCC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCATCTGCCGCCTGAGTaGTGCTGCGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVHLPPE*CCGSCL
Trigger: CAGGCAGCTGCCGCAGCAGCACTCAGGCGGCAGATG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCGGCAGTTGAGGAAGTaGTGGTGGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGRQLRK*WWLLVV
Trigger: CACCACCAGCAGCCACCAGCACTTCCTCAACTGCCG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGGGAAGCAGGTGGTACTaGCTCCGTCCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTGSRWY*LRPGIR
Trigger: CCTGATGCCAGGACGGAGGCAGTACCACCTGCTTCC...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGTGCTGGCTGCCACTTaGCCAAACACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAVLAAT*PNTGVA
Trigger: TGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCAC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGTGCTGGCTGCCACTTaGCCAAACACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIVLAAT*PNTGVA
Trigger: TGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCAC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGTGCTGGCTGCCACTTaGCCAAACACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACVLAAT*PNTGVA
Trigger: TGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCAC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTGGTGCGGTGCTGGCTaGCACTTGCCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRWCGAG*HLPKHG
Trigger: CCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGCCAAAGACTGAGGCCTaGCCGAAGGTTGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLLTRPQLRQPPKPWTDEPKTEA*PKVVCP
Trigger: TGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGG...CTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGCACTGCTCGCCGACTaGCCAAAGACTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIALLAD*PKTEAC
Trigger: GCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVSCAGS*SALSEH
Trigger: GTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGA...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACSCAGS*SALSEH
Trigger: GTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGA...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRSCAGS*SALSEH
Trigger: GTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDASCAGS*SALSEH
Trigger: GTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGAAACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTKPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGACCCCTGCTTGGCTTaGTTAGCAGCCACTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPDPCLA*LAATGV
Trigger: GACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGACCCCTGCTTGGCTTaGTTAGCAGCCACTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGDPCLA*LAATGV
Trigger: GACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACGGAGCCTGGGGAAGCTaGGCTGACTGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IERPADTPSASPATKTLDGAWGS*ADCCSS
Trigger: AGAGGAGCAACAGTCAGCCCAGCTTCCCCAGGCTCC...GTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGACCCCCGTGGTGGCTaGGGTAGCCTCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRDPRGG*GSLCRK
Trigger: CTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACCCCCGTGGTGGCTaGGGTAGCCTCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPADPRGG*GSLCRK
Trigger: CTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGTACTGCCTCCGTCCTaGCATCAGGGACCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEVLPPS*HQGPPW
Trigger: CCACGGGGGTCCCTGATGCCAGGACGGAGGCAGTAC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTGTACTGCCTCCGTCCTaGCATCAGGGACCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ADTPSASPATKTLDRRVIVLPPS*HQGPPW
Trigger: CCACGGGGGTCCCTGATGCCAGGACGGAGGCAGTAC...AATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGCCCAAACACGGGCGTaGCAGAGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMAQTRA*QRGQWL
Trigger: CAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTGGCTGCATCCTGACTaGGTTTTCCTCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLTRPQLRQPPKPWTDEWLHPD*VFLQGH
Trigger: GTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCA...CTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGAAGGGCTGCCAAACACTaGAGCAGCACCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: ERPADTPSASPATKTLDRRAAKH*SSTEAT
Trigger: GGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCT...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCAGGGCTGCCAAACACTaGAGCAGCACCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPRAAKH*SSTEAT
Trigger: GGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVRILLR*QLQCPL
Trigger: GAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCG...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRRILLR*QLQCPL
Trigger: GAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCG...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCGGCCCCCTCCTCTCTaGAGTAGGACACATGGCACC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPARPPPL*SRTHGT
Trigger: GGTGCCATGTGTCCTACTCCAGAGAGGAGGGGGCCG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACTCGGAGACAGGCTCATaGCCAGGGACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDSETGS*PGTRIL
Trigger: GAGGATTCGGGTCCCTGGCCATGAGCCTGTCTCCGA...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGTTCCTCCTCCTGCCTTaGGCCTCATCAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLFLLLP*ASSATA
Trigger: GGCTGTTGCTGATGAGGCCCAAGGCAGGAGGAGGAA...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR TCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGGGAGTACTTCCTGGTaGCTTGGGCTGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRGSTSW*LGLSLS
Trigger: GGAGAGCGACAGCCCAAGTCACCAGGAAGTACTCCC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGGAGCCACTGGAATATaGAGGGGGCTCCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAGATGI*RGLPSD
Trigger: GTCACTGGGGAGCCCCCTTCATATTCCAGTGGCTCC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCTGAGACAGAAAGGCTaGTCGAGACAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPLRQKG*SRQAGW
Trigger: CCAGCCAGCCTGTCTCGATCAGCCTTTCTGTCTCAG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTTGCGTCCGGCTGGCTTaGCTCTTTAGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCCVRLA*LFSGGC
Trigger: ACACCCTCCACTAAAGAGTCAAGCCAGCCGGACGCA...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTGCGTCCGGCTGGCTTaGCTCTTTAGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTCVRLA*LFSGGC
Trigger: ACACCCTCCACTAAAGAGTCAAGCCAGCCGGACGCA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGCTTCCCCCACCAGATaGGAATGCGTCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERASPTR*ECVRLA
Trigger: AGCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACCACAGGGCCTGCACTTaGGATAGCAGCTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDHRACT*DSSCCD
Trigger: GTCACAGCAGCTGCTATCTCAAGTGCAGGCCCTGTG...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCACAGGGCCTGCACTTaGGATAGCAGCTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTHRACT*DSSCCD
Trigger: GTCACAGCAGCTGCTATCTCAAGTGCAGGCCCTGTG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTGGGCTGCTAAACCCTaGGCTGCTGACCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGWAAKP*AADLWC
Trigger: ACACCACAGGTCAGCAGCTCAGGGTTTAGCAGCCCA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCGACTGCCCAAAGACTaGGGCCTGCCCGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRRLPKD*GLPEGC
Trigger: ACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCG...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTCCCCACTGGCCGAGCTaGATGGGTTTTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCPHWPS*MGFCWL
Trigger: CAGCCAACAAAAACCCATTCAGCTCGGCCAGTGGGG...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTGTAAAGGCTGGGGCTaGACCGAATGCTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGICKGWG*TECWHP
Trigger: GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVDRKAC*HALSFA
Trigger: GGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEDRKAC*HALSFA
Trigger: GGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGISRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCCAACTGCTGCTGGCATaGGTGGCTTCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIQLLLA*VASSAS
Trigger: GGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGTTG...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCAACTGCTGCTGGCATaGGTGGCTTCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAQLLLA*VASSAS
Trigger: GGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGTTG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCGGGAGAGCCTGGCTTTaGCGCTGGAGGGGTTATCCT +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVGRAWL*RWRGYP
Trigger: AGGATAACCCCTCCAGCGGCAAAGCCAGGCTCTCCC...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGGGAGAGCCTGGCTTTaGCGCTGGAGGGGTTATCCT +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRGRAWL*RWRGYP
Trigger: AGGATAACCCCTCCAGCGGCAAAGCCAGGCTCTCCC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCTGGATGGAAGGAGTaGGAACCACGGGGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDAGWKE*EPRGRA
Trigger: GGCACGCCCCCGTGGTTCGCACTCCTTCCATCCAGC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGCTGGATGGAAGGAGTaGGAACCACGGGGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGAGWKE*EPRGRA
Trigger: GGCACGCCCCCGTGGTTCGCACTCCTTCCATCCAGC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGCTGCGGCAGCTGCCTaGGGGGCTGAGATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHAAAAA*GAEMGW
Trigger: CCACCCCATCTCAGCCCCGCAGGCAGCTGCCGCAGC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCATCTGCCGCCTGAGTaGTGCTGCGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDHLPPE*CCGSCL
Trigger: CAGGCAGCTGCCGCAGCAGCACTCAGGCGGCAGATG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCGGCAGTTGAGGAAGTaGTGGTGGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRRQLRK*WWLLVV
Trigger: CACCACCAGCAGCCACCAGCACTTCCTCAACTGCCG...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGACCCCAGAGGATCCTaGACTGGTGACTGGCAGACT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGDPRGS*TGDWQT
Trigger: AGTCTGCCAGTCACCAGTGCAGGATCCTCTGGGGTC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGGTACCAAATGCTGCTaGCTCTGCAGATGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACGTKCC*LCRWAG
Trigger: CCCGGCCCATCTGCAGAGGCAGCAGCATTTGGTACC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGAGACGGTACCAAATGCTaGTGCCTCTGCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: ERPADTPSASPATKTLDRDGTKC*CLCRWA
Trigger: GGCCCATCTGCAGAGGCAGCAGCATTTGGTACCGTC...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGACAGACTTGGTGCGGTaGTGGCTGCCACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGTDLVR*WLPLAQ
Trigger: TTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGGTGTGGCAGCTGCTGTaGTGGCTGTGCTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTVWQLL*WLCYQS
Trigger: AGACTGGTAGCACAGCCAGCACAGCAGCTGCCACAC...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGAGTGTGGCAGCTGCTGTaGTGGCTGTGCTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: ERPADTPSASPATKTLDRVWQLL*WLCYQS
Trigger: AGACTGGTAGCACAGCCAGCACAGCAGCTGCCACAC...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGTGTGGCAGCTGCTGTaGTGGCTGTGCTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGVWQLL*WLCYQS
Trigger: AGACTGGTAGCACAGCCAGCACAGCAGCTGCCACAC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGTGTGGCAGCTGCTGTaGTGGCTGTGCTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPVWQLL*WLCYQS
Trigger: AGACTGGTAGCACAGCCAGCACAGCAGCTGCCACAC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGCACTGCTCGCCGACTaGCCAAAGACTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVALLAD*PKTEAC
Trigger: GCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGGCTGAACCCAGAGGTTaGTGCTGTTGTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTAEPRG*CCCGGS
Trigger: GCTGCCACCACAACAGCAGCAACCTCTGGGTTCAGC...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCCTCTCCGAACACTTTaGCTCCCGTCGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAPLRTL*LPSSPE
Trigger: CTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAAACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACKPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGAGGATGTGGTGTTGCTaGTGCTCCCAAACCCGAATC +
Preference number: 4 (lower is better)
Translates to: GLLTRPQLRQPPKPWTDERMWCC*CSQTRI
Trigger: GATTCGGGTTTGGGAGCAGCAGCAACACCACATCCT...CTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR GCA 90 bp TGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAGGTGGCCAAGGGATCTaGTCTCATTGGACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: WSQGSKGLLTRPQLRQPPGGQGI*SHWTFS
Trigger: GGAGAAAGTCCAATGAGAGCAGATCCCTTGGCCACC...TGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTGTGGGGTGGCTGAGTaGTCCAGAAGCAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTCGVAE*SRSSWL
Trigger: AAGCCAGCTGCTTCTGGACCACTCAGCCACCCCACA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTGTGGGGTGGCTGAGTaGTCCAGAAGCAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGCGVAE*SRSSWL
Trigger: AAGCCAGCTGCTTCTGGACCACTCAGCCACCCCACA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTCGAGACAGGCTGGCTaGAGCAGTGGATCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGSRQAG*SSGSHW
Trigger: CCAGTGAGATCCACTGCTCCAGCCAGCCTGTCTCGA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTGCAAAAGGTGCTGCATaGGGCAAGAGACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCAKGAA*GKRLGW
Trigger: CCAGCCCAGTCTCTTGCCCCATGCAGCACCTTTTGC...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGGGGCTGAGATGGGGTaGGAAGGACTAGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRGAEMG*EGLGAP
Trigger: TGGTGCACCTAGTCCTTCCCACCCCATCTCAGCCCC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGGGGCTGAGATGGGGTaGGAAGGACTAGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAGAEMG*EGLGAP
Trigger: TGGTGCACCTAGTCCTTCCCACCCCATCTCAGCCCC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGGGCTGAGATGGGGTaGGAAGGACTAGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAGAEMG*EGLGAP
Trigger: TGGTGCACCTAGTCCTTCCCACCCCATCTCAGCCCC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGACCCCTGCTTGGCTTaGTTAGCAGCCACTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKADPCLA*LAATGV
Trigger: GACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGAAGCTCTCCCAGCTTaGACGGTGGGGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPEALPA*TVGFPA
Trigger: AGCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTGGTGGTGGGGCAGATaGGGGCACTGTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPWWWGR*GHCAIG
Trigger: ACCAATAGCACAGTGCCCCCATCTGCCCCACCACCA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAGTGGCAGCTGTAGTTaGTGGTGGGGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACSGSCS*WWGRWG
Trigger: CCCCCATCTGCCCCACCACCAACTACAGCTGCCACT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTACTGCCTCCGTCCTaGCATCAGGGACCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDVLPPS*HQGPPW
Trigger: CCACGGGGGTCCCTGATGCCAGGACGGAGGCAGTAC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGAAAGGAGGAAGCAGGTaGTACTGCCTCCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGKGGSR*YCLRPG
Trigger: GCCAGGACGGAGGCAGTACCACCTGCTTCCTCCTTT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGAGCAACAATGGACGTaGTGCTGGAGGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGEQQWT*CWRLWG
Trigger: CCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGCCGGGAGCAACAATaGACGTGGTGCTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAGREQQ*TWCWRL
Trigger: TAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGGCCGGGAGCAACAATaGACGTGGTGCTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRGREQQ*TWCWRL
Trigger: TAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCTGCCCAAACAGACTTaGTGCGGTGCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDALPKQT*CGAGCH
Trigger: GTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTGGCAGCTGCTGTGCTaGCTGTGCTACCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGWQLLC*LCYQSA
Trigger: AGCAGACTGGTAGCACAGCCAGCACAGCAGCTGCCA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTGGCAGCTGCTGTGCTaGCTGTGCTACCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTWQLLC*LCYQSA
Trigger: AGCAGACTGGTAGCACAGCCAGCACAGCAGCTGCCA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAGGGCTGCCAAACACTaGAGCAGCACCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPARAAKH*SSTEAT
Trigger: GGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAGGGCTGCCAAACACTaGAGCAGCACCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDARAAKH*SSTEAT
Trigger: GGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGCGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVRILLR*QLQCPL
Trigger: GAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCG...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERRILLR*QLQCPL
Trigger: GAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATGGAGCCACTGGAATATaGAGGGGGCTCCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDGATGI*RGLPSD
Trigger: GTCACTGGGGAGCCCCCTTCATATTCCAGTGGCTCC...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGGCTTGAACTGCCCTaGGCAGATCGTCCTGATGGT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAGLELP*ADRPDG
Trigger: ACCATCAGGACGATCTGCTCAGGGCAGTTCAAGCCC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGGGGTCAACACTGGGTaGGGTGTTTTGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIGVNTG*GVLAVE
Trigger: CTCCACAGCCAAAACACCTCACCCAGTGTTGACCCC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGCTTCCCCCACCAGATaGGAATGCGTCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWASPTR*ECVRLA
Trigger: AGCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGC...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCTTCCCCCACCAGATaGGAATGCGTCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDASPTR*ECVRLA
Trigger: AGCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGCTTCCCCCACCAGATaGGAATGCGTCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGASPTR*ECVRLA
Trigger: AGCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGCCAACCCGCAGTCCTaGAAAACTTCCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDANPQS*KTSQSL
Trigger: GAGACTCTGGGAAGTTTTTCAGGACTGCGGGTTGGC...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGCCAACCCGCAGTCCTaGAAAACTTCCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPANPQS*KTSQSL
Trigger: GAGACTCTGGGAAGTTTTTCAGGACTGCGGGTTGGC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCACAGGGCCTGCACTTaGGATAGCAGCTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAHRACT*DSSCCD
Trigger: GTCACAGCAGCTGCTATCTCAAGTGCAGGCCCTGTG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCCACAGGGCCTGCACTTaGGATAGCAGCTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACHRACT*DSSCCD
Trigger: GTCACAGCAGCTGCTATCTCAAGTGCAGGCCCTGTG...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCACAGGGCCTGCACTTaGGATAGCAGCTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAHRACT*DSSCCD
Trigger: GTCACAGCAGCTGCTATCTCAAGTGCAGGCCCTGTG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGAGCTGGTTGAAAGCTaGGCTAGAACTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPELVES*ARTGSR
Trigger: CCTGCTGCCAGTTCTAGCTCAGCTTTCAACCAGCTC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGAGCTGGTTGAAAGCTaGGCTAGAACTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGELVES*ARTGSR
Trigger: CCTGCTGCCAGTTCTAGCTCAGCTTTCAACCAGCTC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTGGGCTGCTAAACCCTaGGCTGCTGACCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIWAAKP*AADLWC
Trigger: ACACCACAGGTCAGCAGCTCAGGGTTTAGCAGCCCA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTGGGCTGCTAAACCCTaGGCTGCTGACCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAWAAKP*AADLWC
Trigger: ACACCACAGGTCAGCAGCTCAGGGTTTAGCAGCCCA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGGGCTGCTAAACCCTaGGCTGCTGACCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAWAAKP*AADLWC
Trigger: ACACCACAGGTCAGCAGCTCAGGGTTTAGCAGCCCA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTTCCTCCAAGGCCACTaGAGAAACCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPFLQGH*RNLPLF
Trigger: GAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTTCCTCCAAGGCCACTaGAGAAACCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTFLQGH*RNLPLF
Trigger: GAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ADTPSASPATKTLDRRVIKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...AATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTTCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTSRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTTCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ADTPSASPATKTLDRRVISRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...AATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERSRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: PADTPSASPATKTLDRRVMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...AACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTTTCCCACTGCCAGCTaGTTTCCTTTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGFPTAS*FPLGLQ
Trigger: CTGGAGCCCCAAAGGAAAGCAGCTGGCAGTGGGAAA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGCACTGGGCTTGAACTaGCCTGAGCAGATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAALGLN*PEQIVL
Trigger: CAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGCACTGGGCTTGAACTaGCCTGAGCAGATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIALGLN*PEQIVL
Trigger: CAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGGGAGAGCCTGGCTTTaGCGCTGGAGGGGTTATCCT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERGRAWL*RWRGYP
Trigger: AGGATAACCCCTCCAGCGGCAAAGCCAGGCTCTCCC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCTGCGGCAGCTGCCTaGGGGGCTGAGATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PEADGVEVTAVSILAVPEAAAAA*GAEMGW
Trigger: CCACCCCATCTCAGCCCCGCAGGCAGCTGCCGCAGC...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCGGCAGTTGAGGAAGTaGTGGTGGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVRQLRK*WWLLVV
Trigger: CACCACCAGCAGCCACCAGCACTTCCTCAACTGCCG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGACCCCAGAGGATCCTaGACTGGTGACTGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDADPRGS*TGDWQT
Trigger: AGTCTGCCAGTCACCAGTGCAGGATCCTCTGGGGTC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGACCCCAGAGGATCCTaGACTGGTGACTGGCAGACT +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACDPRGS*TGDWQT
Trigger: AGTCTGCCAGTCACCAGTGCAGGATCCTCTGGGGTC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACCCCAGAGGATCCTaGACTGGTGACTGGCAGACT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPADPRGS*TGDWQT
Trigger: AGTCTGCCAGTCACCAGTGCAGGATCCTCTGGGGTC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGGAAGCAGGTGGTACTaGCTCCGTCCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERGSRWY*LRPGIR
Trigger: CCTGATGCCAGGACGGAGGCAGTACCACCTGCTTCC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTGCTGTGACAGCAGTCTaGCCAGGCACAGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCAVTAV*PGTEKE
Trigger: CTCCTTTTCTGTGCCTGGGCAGACTGCTGTCACAGC...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTCAACAATGGACGTGGTaGTGGAGGCTATGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCQQWTW*WRLWGY
Trigger: GTACCCCCATAGCCTCCAGCACCACGTCCATTGTTG...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCAACAATGGACGTGGTaGTGGAGGCTATGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGQQWTW*WRLWGY
Trigger: GTACCCCCATAGCCTCCAGCACCACGTCCATTGTTG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAAATGCTGCTGCCTCTaGAGATGGGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACKCCCL*RWAGSN
Trigger: GTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCATTT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCACAGACTTGGTGCGGTaGTGGCTGCCACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGITDLVR*WLPLAQ
Trigger: TTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTACAGACTTGGTGCGGTaGTGGCTGCCACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPATDLVR*WLPLAQ
Trigger: TTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGACAGACTTGGTGCGGTaGTGGCTGCCACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRTDLVR*WLPLAQ
Trigger: TTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCCCAAACAGACTTGGTaGGGTGCTGGCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAPKQTW*GAGCHL
Trigger: CAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCACCAAAGACTGAGGCCTaGCCGAAGGTTGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KLRMRLVPGIERPADTPSPKTEA*PKVVCP
Trigger: TGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGG...TGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCAAAGACTGAGGCCTaGCCGAAGGTTGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTPKTEA*PKVVCP
Trigger: TGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGCACTGCTCGCCGACTaGCCAAAGACTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMALLAD*PKTEAC
Trigger: GCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCAAAAGCAGGAGCGTTaGTTTGGCCAAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGQKQER*FGQTAP
Trigger: GGGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCACAAAAGCAGGAGCGTTaGTTTGGCCAAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KLRMRLVPGIERPADTPSQKQER*FGQTAP
Trigger: GGGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTG...TGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCAAAGCCAGGACTCTaGCCAAAAGCAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTPKPGL*PKAGAL
Trigger: CAACGCTCCTGCTTTTGGGCAGAGTCCTGGCTTTGG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTCCAAAGCCAGGACTCTaGCCAAAAGCAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: PADTPSASPATKTLDRRVPKPGL*PKAGAL
Trigger: CAACGCTCCTGCTTTTGGGCAGAGTCCTGGCTTTGG...AACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCGCTGAACCCAGAGGTTaGTGCTGTTGTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVAEPRG*CCCGGS
Trigger: GCTGCCACCACAACAGCAGCAACCTCTGGGTTCAGC...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGCTGAACCCAGAGGTTaGTGCTGTTGTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAAEPRG*CCCGGS
Trigger: GCTGCCACCACAACAGCAGCAACCTCTGGGTTCAGC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGTGCCAGTGGGTTTCTaGTCTCCAAACGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGVPVGF*SPNDEL
Trigger: CAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCAC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCGCTGGCAGCTGCAGTaGCCTCTCCGAACACTTTGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVRWQLQ*PLRTLC
Trigger: GCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCGCTGGCAGCTGCAGTaGCCTCTCCGAACACTTTGC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAERWQLQ*PLRTLC
Trigger: GCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPRRMWC*CCSQTR
Trigger: TCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGISDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGGCGCAGCACTGTCCTaGCTCACGCTGGCTACTATT +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACGAALS*LTLATI
Trigger: AATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCAGCCATCACCACATCTaGAGACGTTTCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPSHHHI*RRFQGP
Trigger: GGGACCCTGGAAACGTCTCCAGATGTGGTGATGGCT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGAGAGAGGTGTGGGGTaGCTGAGTGGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRERGVG*LSGPEA
Trigger: TGCTTCTGGACCACTCAGCCACCCCACACCTCTCTC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGAGCAGTGGATCTCACTaGTGGGGTCTTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTSSGSH*WGLPLG
Trigger: GCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCAGAGACTGGGCTGGATaGAAGGAGTGCGAACCACGG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIRDWAG*KECEPR
Trigger: CCGTGGTTCGCACTCCTTCCATCCAGCCCAGTCTCT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAGAGACTGGGCTGGATaGAAGGAGTGCGAACCACGG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACRDWAG*KECEPR
Trigger: CCGTGGTTCGCACTCCTTCCATCCAGCCCAGTCTCT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAGAGACTGGGCTGGATaGAAGGAGTGCGAACCACGG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKARDWAG*KECEPR
Trigger: CCGTGGTTCGCACTCCTTCCATCCAGCCCAGTCTCT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGCAAAAGGTGCTGCATaGGGCAAGAGACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACAKGAA*GKRLGW
Trigger: CCAGCCCAGTCTCTTGCCCCATGCAGCACCTTTTGC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCTGGGTGAGGTGTTTTaGCTGTGGAGTAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTLGEVF*LWSRAL
Trigger: CAGTGCCCTACTCCACAGCCAAAACACCTCACCCAG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCTGGGTGAGGTGTTTTaGCTGTGGAGTAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPLGEVF*LWSRAL
Trigger: CAGTGCCCTACTCCACAGCCAAAACACCTCACCCAG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGATTGGTTAGCAGCCACTaGGGTCAACACTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ERPADTPSASPATKTLDRLVSSH*GQHWVR
Trigger: CCTCACCCAGTGTTGACCCCAGTGGCTGCTAACCAA...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAAGCTCTCCCAGCTTaGACGGTGGGGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAEALPA*TVGFPA
Trigger: AGCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGAAGCTCTCCCAGCTTaGACGGTGGGGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMREALPA*TVGFPA
Trigger: AGCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTGGTGGTGGGGCAGATaGGGGCACTGTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAWWWGR*GHCAIG
Trigger: ACCAATAGCACAGTGCCCCCATCTGCCCCACCACCA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGGTGGTGGGGCAGATaGGGGCACTGTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAWWWGR*GHCAIG
Trigger: ACCAATAGCACAGTGCCCCCATCTGCCCCACCACCA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTGGTGGTGGGGCAGATaGGGGCACTGTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIWWWGR*GHCAIG
Trigger: ACCAATAGCACAGTGCCCCCATCTGCCCCACCACCA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAGCTGTAGTTGGTGGTaGGGCAGATGGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPASCSWW*GRWGHC
Trigger: ACAGTGCCCCCATCTGCCCCACCACCAACTACAGCT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCGGAGCCTGGGGAAGCTaGGCTGACTGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETGAWGS*ADCCSS
Trigger: AGAGGAGCAACAGTCAGCCCAGCTTCCCCAGGCTCC...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGAGCCTGGGGAAGCTaGGCTGACTGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVGAWGS*ADCCSS
Trigger: AGAGGAGCAACAGTCAGCCCAGCTTCCCCAGGCTCC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGGAGCCTGGGGAAGCTaGGCTGACTGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEGAWGS*ADCCSS
Trigger: AGAGGAGCAACAGTCAGCCCAGCTTCCCCAGGCTCC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAAAGGAGGAAGCAGGTaGTACTGCCTCCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAKGGSR*YCLRPG
Trigger: GCCAGGACGGAGGCAGTACCACCTGCTTCCTCCTTT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCAATGGACGTGGTGCTaGAGGCTATGGGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPQWTWC*RLWGYL
Trigger: CAAGTACCCCCATAGCCTCCAGCACCACGTCCATTG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACCAATGGACGTGGTGCTaGAGGCTATGGGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDQWTWC*RLWGYL
Trigger: CAAGTACCCCCATAGCCTCCAGCACCACGTCCATTG...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGGCCGGGAGCAACAATaGACGTGGTGCTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEGREQQ*TWCWRL
Trigger: TAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGCCCAAACACGGGCGTaGCAGAGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFAQTRA*QRGQWL
Trigger: CAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACDLVRC*LPLAQT
Trigger: TGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKADLVRC*LPLAQT
Trigger: TGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIDLVRC*LPLAQT
Trigger: TGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCTGCCCAAACAGACTTaGTGCGGTGCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVLPKQT*CGAGCH
Trigger: GTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGGCAGCTGCTGTGCTaGCTGTGCTACCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACWQLLC*LCYQSA
Trigger: AGCAGACTGGTAGCACAGCCAGCACAGCAGCTGCCA...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCTGTCCAAAGACCCCTaGGGCTGTGGTACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPLSKDP*GCGTKS
Trigger: GCTTTTGGTACCACAGCCCCAGGGGTCTTTGGACAG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCTGTCCAAAGACCCCTaGGGCTGTGGTACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTLSKDP*GCGTKS
Trigger: GCTTTTGGTACCACAGCCCCAGGGGTCTTTGGACAG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTGGCTGCATCCTGACTaGGTTTTCCTCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGWLHPD*VFLQGH
Trigger: GTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAGGGCTGCCAAACACTaGAGCAGCACCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERRAAKH*SSTEAT
Trigger: GGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTTCGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LTRPQLRQPPKPWTDELFRILLR*QLQCPL
Trigger: GAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCG...AAATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTGCTGCTGGCATGAGTaGCTTCCTCTGCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPACCWHE*LPLPPL
Trigger: GAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGCTGGCATGAGTaGCTTCCTCTGCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKACCWHE*LPLPPL
Trigger: GAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATGGGCTTGAACTGCCCTaGGCAGATCGTCCTGATGGT +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDGLELP*ADRPDG
Trigger: ACCATCAGGACGATCTGCTCAGGGCAGTTCAAGCCC...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359428.10
CDS-3UTR TCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATCTGAGACAGAAAGGCTaGTCGAGACAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDLRQKG*SRQAGW
Trigger: CCAGCCAGCCTGTCTCGATCAGCCTTTCTGTCTCAG...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAATGGCCATCTGCCGCCTaGGTGCTGCTGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PEADGVEVTAVSILAVPEWPSAA*VLLRQL
Trigger: CAGCTGCCGCAGCAGCACTCAGGCGGCAGATGGCCA...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTGCGTCCGGCTGGCTTaGCTCTTTAGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERCVRLA*LFSGGC
Trigger: ACACCCTCCACTAAAGAGTCAAGCCAGCCGGACGCA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTGTTTGATGCGGATGTaGTTCCTGAGGGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTCLMRM*FLREVS
Trigger: GCTCACCTCCCTCAGGAATCACATCCGCATCAAACA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTTGTTTGATGCGGATGTaGTTCCTGAGGGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCCLMRM*FLREVS
Trigger: GCTCACCTCCCTCAGGAATCACATCCGCATCAAACA...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTGTTTGATGCGGATGTaGTTCCTGAGGGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPCLMRM*FLREVS
Trigger: GCTCACCTCCCTCAGGAATCACATCCGCATCAAACA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGCCAACCCGCAGTCCTaGAAAACTTCCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAANPQS*KTSQSL
Trigger: GAGACTCTGGGAAGTTTTTCAGGACTGCGGGTTGGC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCACAGGGCCTGCACTTaGGATAGCAGCTGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEHRACT*DSSCCD
Trigger: GTCACAGCAGCTGCTATCTCAAGTGCAGGCCCTGTG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCCGGATGAGCCAGAAGTaGCGGTACCAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACRMSQK*RYQMLL
Trigger: CAGCAGCATTTGGTACCGTCACTTCTGGCTCATCCG...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCGAGCTGGTTGAAAGCTaGGCTAGAACTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVELVES*ARTGSR
Trigger: CCTGCTGCCAGTTCTAGCTCAGCTTTCAACCAGCTC...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGAGCTGGTTGAAAGCTaGGCTAGAACTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAELVES*ARTGSR
Trigger: CCTGCTGCCAGTTCTAGCTCAGCTTTCAACCAGCTC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGAGCTGGTTGAAAGCTaGGCTAGAACTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAELVES*ARTGSR
Trigger: CCTGCTGCCAGTTCTAGCTCAGCTTTCAACCAGCTC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTGGGCTGCTAAACCCTaGGCTGCTGACCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVWAAKP*AADLWC
Trigger: ACACCACAGGTCAGCAGCTCAGGGTTTAGCAGCCCA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGGAGCTACTGGTACTTaGGGCGGCACCAAAGACACT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAGATGT*GGTKDT
Trigger: AGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGCCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTA +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLPVLAA*PNTEPV
Trigger: TACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGG...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTTCCTCCAAGGCCACTaGAGAAACCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAFLQGH*RNLPLF
Trigger: GAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTTCCTCCAAGGCCACTaGAGAAACCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAFLQGH*RNLPLF
Trigger: GAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTTCCTCCAAGGCCACTaGAGAAACCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAFLQGH*RNLPLF
Trigger: GAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCCCCACTGGCCGAGCTaGATGGGTTTTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVPHWPS*MGFCWL
Trigger: CAGCCAACAAAAACCCATTCAGCTCGGCCAGTGGGG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTFLLQS*KCQWVS
Trigger: AGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATTGTAAAGGCTGGGGCTaGACCGAATGCTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDCKGWG*TECWHP
Trigger: GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACA...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDSLLGQ*SESGGI
Trigger: AATGCCCCCACTTTCGGATCACTGTCCCAACAGACT...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGACACAGTGTTCTGGCTaGTGGAGGCTCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDATQCSG*WRLCWL
Trigger: AAGCCAGCAGAGCCTCCATCAGCCAGAACACTGTGT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCACACAGTGTTCTGGCTaGTGGAGGCTCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVTQCSG*WRLCWL
Trigger: AAGCCAGCAGAGCCTCCATCAGCCAGAACACTGTGT...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAACACCCGACGCTGGTaGCTTCTGATGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACNTRRW*LLMPSL
Trigger: CAAGGATGGCATCAGAAGTCACCAGCGTCGGGTGTT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCGCTATGGCTGCTTCTaGAACTCAACTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVRYGCF*NSTAAG
Trigger: GCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCG...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTCCCACTGCCAGCTaGTTTCCTTTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRFPTAS*FPLGLQ
Trigger: CTGGAGCCCCAAAGGAAAGCAGCTGGCAGTGGGAAA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTGGCGACATCGGGGGTaGGCTCTGGGAGCTACTAAC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMWRHRG*ALGATN
Trigger: GTTAGTAGCTCCCAGAGCGCACCCCCGATGTCGCCA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000451030.5
CDS-3UTR GCA 90 bp TCTTGGCTGTCCCTGAAGCTTTGTCACCAGATGATAACTGACCGGATGCTGGTGCATCTGCCGCCTGAGTaGTGCTGCGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SWLSLKLCHQMITDRMLVHLPPE*CCGSCL
Trigger: CAGGCAGCTGCCGCAGCAGCACTCAGGCGGCAGATG...CACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGGACAGCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCAGTGTTTACAGCTGGTaGCTGACTGGCCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGISVYSW*LTGHLP
Trigger: CGGCAGATGGCCAGTCAGGCACCAGCTGTAAACACT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGAAAGGCTTGCTGAACTaGCCAGAAGCAGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLKGLLN*PEADGV
Trigger: AACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTT...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCAGCAGTTCCAGAAGGTaGCACAGGTCTGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPSSSRR*HRSAAR
Trigger: TCTAGCAGCAGACCTGTGGCACCTTCTGGAACTGCT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCGGCAGTTGAGGAAGTaGTGGTGGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDRQLRK*WWLLVV
Trigger: CACCACCAGCAGCCACCAGCACTTCCTCAACTGCCG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCAGATGGGGGCACTGTaGTATTGGTCTGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTQMGAL*YWSVGF
Trigger: GAAGCCAACAGACCAATAGCACAGTGCCCCCATCTG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCACAGAGTCAGAAGTTTaGGGAGGAGCCTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGITESEV*GGAWGS
Trigger: GCTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGGAAGCAGGTGGTACTaGCTCCGTCCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGGSRWY*LRPGIR
Trigger: CCTGATGCCAGGACGGAGGCAGTACCACCTGCTTCC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCAAATGCTGCTGCCTCTaGAGATGGGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETKCCCL*RWAGSN
Trigger: GTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCATTT...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGTACCAAATGCTGCTaGCTCTGCAGATGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDGTKCC*LCRWAG
Trigger: CCCGGCCCATCTGCAGAGGCAGCAGCATTTGGTACC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTGACGGTACCAAATGCTaGTGCCTCTGCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTDGTKC*CLCRWA
Trigger: GGCCCATCTGCAGAGGCAGCAGCATTTGGTACCGTC...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGACGGTACCAAATGCTaGTGCCTCTGCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERDGTKC*CLCRWA
Trigger: GGCCCATCTGCAGAGGCAGCAGCATTTGGTACCGTC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTGGTGCGGTGCTGGCTaGCACTTGCCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKWCGAG*HLPKHG
Trigger: CCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCCCAAACAGACTTGGTaGGGTGCTGGCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEPKQTW*GAGCHL
Trigger: CAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGCTGTGCTACCAGTCTaGTGCCCAAACAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPAVLPV*CPNRLG
Trigger: ACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACAGC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGTGTGGCAGCTGCTGTaGTGGCTGTGCTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERVWQLL*WLCYQS
Trigger: AGACTGGTAGCACAGCCAGCACAGCAGCTGCCACAC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCCAAAGACTGAGGCCTaGCCGAAGGTTGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRPKTEA*PKVVCP
Trigger: TGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGG...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAGACACTTGCAGCACTaGTCGCCGACTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACRHLQH*SPTAQR
Trigger: TCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAGACACTTGCAGCACTaGTCGCCGACTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRRHLQH*SPTAQR
Trigger: TCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGAAGGAAAAGACACTTaGAGCACTGCTCGCCGACTG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGEGKDT*STARRL
Trigger: CAGTCGGCGAGCAGTGCTGCAAGTGTCTTTTCCTTC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCAAAAGCAGGAGCGTTaGTTTGGCCAAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVQKQER*FGQTAP
Trigger: GGGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTG...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCCAAAAGCAGGAGCGTTaGTTTGGCCAAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIQKQER*FGQTAP
Trigger: GGGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTG...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCAAAAGCAGGAGCGTTaGTTTGGCCAAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAQKQER*FGQTAP
Trigger: GGGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCCAAAGCCAGGACTCTaGCCAAAAGCAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAPKPGL*PKAGAL
Trigger: CAACGCTCCTGCTTTTGGGCAGAGTCCTGGCTTTGG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGCTGAACCCAGAGGTTaGTGCTGTTGTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVAEPRG*CCCGGS
Trigger: GCTGCCACCACAACAGCAGCAACCTCTGGGTTCAGC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGCTGAACCCAGAGGTTaGTGCTGTTGTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVAEPRG*CCCGGS
Trigger: GCTGCCACCACAACAGCAGCAACCTCTGGGTTCAGC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGTGCCAGTGGGTTTCTaGTCTCCAAACGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACVPVGF*SPNDEL
Trigger: CAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCAC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATGTGGTGTTGCTGCTaGTCCCAAACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGMWCCC*SQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACAT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDARRMWC*CCSQTR
Trigger: TCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVSDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAESDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTGGCGACATCGGGGGTaGGCTCTGGGAGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVWRHRG*ALGAIF
Trigger: GAAAATAGCTCCCAGAGCGCACCCCCGATGTCGCCA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGACAAACTGCCACCATaGAGGGGACAGTGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVDKLPP*RGQWGS
Trigger: GGAACCCCACTGTCCCCTCCATGGTGGCAGTTTGTC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGCCAGCTGCTTTCCTTTaGGGCTCCAGCACACAGAGG +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVPAAFL*GSSTQR
Trigger: CCTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGG...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCAGACACACTTGGCACTaGTGTGCTTTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPRHTWH*CAFQGR
Trigger: CCTACCCTGGAAAGCACACCAGTGCCAAGTGTGTCT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCATCGGGGGTGCGCTCTaGGAGCTACTAACAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIIGGAL*ELLTGV
Trigger: TACTCCTGTTAGTAGCTCCCAGAGCGCACCCCCGAT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000451030.5
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGAGAGAGGTGTGGGGTaGCTGAGTGGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEERGVG*LSGPEA
Trigger: TGCTTCTGGACCACTCAGCCACCCCACACCTCTCTC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGAGAGAGGTGTGGGGTaGCTGAGTGGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVERGVG*LSGPEA
Trigger: TGCTTCTGGACCACTCAGCCACCCCACACCTCTCTC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCAGTGTCTCTCGCTCTaGCACAAGCAGGTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAQCLSL*HKQVPL
Trigger: CAAAGGCACCTGCTTGTGCCAGAGCGAGAGACACTG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAGCAGTGGATCTCACTaGTGGGGTCTTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACSSGSH*WGLPLG
Trigger: GCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTTGGTTAGCAGCCACTaGGGTCAACACTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPALVSSH*GQHWVR
Trigger: CCTCACCCAGTGTTGACCCCAGTGGCTGCTAACCAA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGACCCCTGCTTGGCTTaGTTAGCAGCCACTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDDPCLA*LAATGV
Trigger: GACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGAGAGAATGCGTCCGGCTaGCTTGACTCTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ERPADTPSASPATKTLDRENASG*LDSLVE
Trigger: CTCCACTAAAGAGTCAAGCCAGCCGGACGCATTCTC...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGAAGCTCTCCCAGCTTaGACGGTGGGGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVEALPA*TVGFPA
Trigger: AGCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTTGAGGAAGTGCTGGTaGCTGCTGGTGGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGILRKCW*LLVVLL
Trigger: CAGTAGCACCACCAGCAGCCACCAGCACTTCCTCAA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCAGTTGAGGAAGTGCTaGTGGCTGCTGGTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAQLRKC*WLLVVL
Trigger: TAGCACCACCAGCAGCCACCAGCACTTCCTCAACTG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCAGTTGAGGAAGTGCTaGTGGCTGCTGGTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAQLRKC*WLLVVL
Trigger: TAGCACCACCAGCAGCCACCAGCACTTCCTCAACTG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAGCTGTAGTTGGTGGTaGGGCAGATGGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERSCSWW*GRWGHC
Trigger: ACAGTGCCCCCATCTGCCCCACCACCAACTACAGCT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTAGTGGCAGCTGTAGTTaGTGGTGGGGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGSGSCS*WWGRWG
Trigger: CCCCCATCTGCCCCACCACCAACTACAGCTGCCACT...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGACCCCCGTGGTGGCTaGGGTAGCCTCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKDPRGG*GSLCRK
Trigger: CTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGTACTGCCTCCGTCCTaGCATCAGGGACCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHVLPPS*HQGPPW
Trigger: CCACGGGGGTCCCTGATGCCAGGACGGAGGCAGTAC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGAAAGGAGGAAGCAGGTaGTACTGCCTCCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEKGGSR*YCLRPG
Trigger: GCCAGGACGGAGGCAGTACCACCTGCTTCCTCCTTT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTAAAGGAGGAAGCAGGTaGTACTGCCTCCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTKGGSR*YCLRPG
Trigger: GCCAGGACGGAGGCAGTACCACCTGCTTCCTCCTTT...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCAATGGACGTGGTGCTaGAGGCTATGGGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAQWTWC*RLWGYL
Trigger: CAAGTACCCCCATAGCCTCCAGCACCACGTCCATTG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTGCCCAAACAGACTTaGTGCGGTGCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGLPKQT*CGAGCH
Trigger: GTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAG...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp ATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACACTTCCACTGGTaGATGTGGGAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: IERPADTPSASPATKTLDRHFHW*MWEWRK
Trigger: CTTCCTCCACTCCCACATCCACCAGTGGAAGTGTCT...GTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACAAAGACACTTCCACTaGTGGATGTGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ERPADTPSASPATKTLDRQRHFH*WMWEWR
Trigger: CCTCCACTCCCACATCCACCAGTGGAAGTGTCTTTG...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGAGGAACTGGAGCTACTaGTACTTGAGGCGGCACCAA +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTRNWSY*YLRRHQ
Trigger: TTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTTGCTGCTGTTGTGGTaGCAGCTGAGGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTLLLLW*QLRYHQ
Trigger: TTGGTGGTACCTCAGCTGCCACCACAACAGCAGCAA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCACTATTCCACCAGTACTaGCTGCTTGACCAAACACAG +
Preference number: 4 (lower is better)
Translates to: WSQGSKGLLTRPQLRQPPLFHQY*LLDQTQ
Trigger: CTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAG...TGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTGGCTGCATCCTGACTaGGTTTTCCTCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAWLHPD*VFLQGH
Trigger: GTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGAGGGCTGCCAAACACTaGAGCAGCACCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMRAAKH*SSTEAT
Trigger: GGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp ATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: IERPADTPSASPATKTLDTVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...GTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGATACTAACTTCTGTTaGAGCCGCAGATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGDTNFC*SRRCCQ
Trigger: CTGGCAGCATCTGCGGCTTCAACAGAAGTTAGTATC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCTGAGACAGAAAGGCTaGTCGAGACAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLRQKG*SRQAGW
Trigger: CCAGCCAGCCTGTCTCGATCAGCCTTTCTGTCTCAG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGGCGTGCCGAGGGGCCTaGACCACTGCCTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKACRGA*TTASSS
Trigger: AGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGC...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTCCCATCACACCAGGTaGAGAACCATGAACCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGISHHTR*RTMNQV
Trigger: CACCTGGTTCATGGTTCTTCACCTGGTGTGATGGGA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTCACCAGATGATAACTaGCCGGATGCTGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPASPDDN*PDAGVG
Trigger: GCCTACACCAGCATCCGGTCAGTTATCATCTGGTGA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTGCGTCCGGCTGGCTTaGCTCTTTAGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGCVRLA*LFSGGC
Trigger: ACACCCTCCACTAAAGAGTCAAGCCAGCCGGACGCA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGCTTCCCCCACCAGATaGGAATGCGTCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHASPTR*ECVRLA
Trigger: AGCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTGTTTGATGCGGATGTaGTTCCTGAGGGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDACLMRM*FLREVS
Trigger: GCTCACCTCCCTCAGGAATCACATCCGCATCAAACA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGCCAACCCGCAGTCCTaGAAAACTTCCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVANPQS*KTSQSL
Trigger: GAGACTCTGGGAAGTTTTTCAGGACTGCGGGTTGGC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGGAGGGGGTAGTTGCTaGACTCAGGAGGCTACCAAA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERGGGSC*TQEATK
Trigger: TTTGGTAGCCTCCTGAGTTCAGCAACTACCCCCTCC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGGCTATGGGGGTACTTaGTGTTTCGACGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMGYGGT*CFDGHR
Trigger: CCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGGCTATGGGGGTACTTaGTGTTTCGACGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGGYGGT*CFDGHR
Trigger: CCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCCTGAGCAAAGACGGATaGGCCAGAAGTGACGGTACC +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETLSKDG*ARSDGT
Trigger: GGTACCGTCACTTCTGGCTCATCCGTCTTTGCTCAG...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCTGAGCAAAGACGGATaGGCCAGAAGTGACGGTACC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVLSKDG*ARSDGT
Trigger: GGTACCGTCACTTCTGGCTCATCCGTCTTTGCTCAG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGGAGCTACTGGTACTTaGGGCGGCACCAAAGACACT +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEGATGT*GGTKDT
Trigger: AGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTGGAGCTACTGGTACTTaGGGCGGCACCAAAGACACT +
Preference number: 4 (lower is better)
Translates to: ADTPSASPATKTLDRRVIGATGT*GGTKDT
Trigger: AGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCC...AATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTGTTGTGGTGGCAGCTaGGGTACCACCAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRCCGGS*GTTKDR
Trigger: TCTGTCTTTGGTGGTACCTCAGCTGCCACCACAACA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGTTGTGGTGGCAGCTaGGGTACCACCAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACCCGGS*GTTKDR
Trigger: TCTGTCTTTGGTGGTACCTCAGCTGCCACCACAACA...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPPVLAA*PNTEPV
Trigger: TACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTTCCTCCAAGGCCACTaGAGAAACCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVFLQGH*RNLPLF
Trigger: GAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACFLLQS*KCQWVS
Trigger: AGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAA...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTGTAAAGGCTGGGGCTaGACCGAATGCTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGCKGWG*TECWHP
Trigger: GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDASLLGQ*SESGGI
Trigger: AATGCCCCCACTTTCGGATCACTGTCCCAACAGACT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKSRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCGCTATGGCTGCTTCTaGAACTCAACTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVRYGCF*NSTAAG
Trigger: GCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGGCTGTCTTCTCAAGTaGCCGGCCCCCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFGCLLK*PAPSSL
Trigger: CAGAGAGGAGGGGGCCGGTCACTTGAGAAGACAGCC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCATCAGCCAGACAAACTaGCACCATGGAGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVISQTN*HHGGDS
Trigger: ACTGTCCCCTCCATGGTGGCAGTTTGTCTGGCTGAT...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGGATGCTGTCTCTCCGTaGAGCTGCCATAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVDAVSP*SCHNRA
Trigger: AGCCCTGTTATGGCAGCTGCACGGAGAGACAGCATC...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGCTGGATGGAAGGAGTaGGAACCACGGGGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTAGWKE*EPRGRA
Trigger: GGCACGCCCCCGTGGTTCGCACTCCTTCCATCCAGC...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGGCTGGATGGAAGGAGTaGGAACCACGGGGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKAGWKE*EPRGRA
Trigger: GGCACGCCCCCGTGGTTCGCACTCCTTCCATCCAGC...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTCGTGGCAAGCATTGTaGTATCGGCCCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASWQAL*YRPLEE
Trigger: TTCCTCAAGGGGCCGATAGCACAATGCTTGCCACGA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGCTGCGGCAGCTGCCTaGGGGGCTGAGATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGAAAAA*GAEMGW
Trigger: CCACCCCATCTCAGCCCCGCAGGCAGCTGCCGCAGC...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGAGTGTTTACAGCTGGTaGCTGACTGGCCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVSVYSW*LTGHLP
Trigger: CGGCAGATGGCCAGTCAGGCACCAGCTGTAAACACT...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCAAAGGCTTGCTGAACTaGCCAGAAGCAGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPKGLLN*PEADGV
Trigger: AACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAGCAGTTCCAGAAGGTaGCACAGGTCTGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASSSRR*HRSAAR
Trigger: TCTAGCAGCAGACCTGTGGCACCTTCTGGAACTGCT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGTTTTGTAGAATCATCTaGTTGGCCAACCCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLFCRII*LANPQS
Trigger: GGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAA...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCGGCAGTTGAGGAAGTaGTGGTGGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKRQLRK*WWLLVV
Trigger: CACCACCAGCAGCCACCAGCACTTCCTCAACTGCCG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCAGATGGGGGCACTGTaGTATTGGTCTGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAQMGAL*YWSVGF
Trigger: GAAGCCAACAGACCAATAGCACAGTGCCCCCATCTG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAGCTGGGCTGACTGTTaGTCCTCTAGAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRSWADC*SSRSEA
Trigger: AGCCTCACTTCTAGAGGAGCAACAGTCAGCCCAGCT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCACAGAGTCAGAAGTTTaGGGAGGAGCCTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVTESEV*GGAWGS
Trigger: GCTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGT...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGACAGAGTCAGAAGTTTaGGGAGGAGCCTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAETESEV*GGAWGS
Trigger: GCTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTACAGAGTCAGAAGTTTaGGGAGGAGCCTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVTESEV*GGAWGS
Trigger: GCTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGCTGTGACAGCAGTCTaGCCAGGCACAGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVAVTAV*PGTEKE
Trigger: CTCCTTTTCTGTGCCTGGGCAGACTGCTGTCACAGC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGCTGTGACAGCAGTCTaGCCAGGCACAGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERAVTAV*PGTEKE
Trigger: CTCCTTTTCTGTGCCTGGGCAGACTGCTGTCACAGC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGCTGTGACAGCAGTCTaGCCAGGCACAGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVAVTAV*PGTEKE
Trigger: CTCCTTTTCTGTGCCTGGGCAGACTGCTGTCACAGC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCAACAATGGACGTGGTaGTGGAGGCTATGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVQQWTW*WRLWGY
Trigger: GTACCCCCATAGCCTCCAGCACCACGTCCATTGTTG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATAAATGCTGCTGCCTCTaGAGATGGGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDKCCCL*RWAGSN
Trigger: GTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCATTT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGGTACCAAATGCTGCTaGCTCTGCAGATGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKGTKCC*LCRWAG
Trigger: CCCGGCCCATCTGCAGAGGCAGCAGCATTTGGTACC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGACGGTACCAAATGCTaGTGCCTCTGCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMDGTKC*CLCRWA
Trigger: GGCCCATCTGCAGAGGCAGCAGCATTTGGTACCGTC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGTGCTGGCTGCCACTTaGCCAAACACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFVLAAT*PNTGVA
Trigger: TGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCAC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCCCAAACAGACTTGGTaGGGTGCTGGCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDPKQTW*GAGCHL
Trigger: CAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGCTGTGCTACCAGTCTaGTGCCCAAACAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAAVLPV*CPNRLG
Trigger: ACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACAGC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGCTGTGCTACCAGTCTaGTGCCCAAACAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRAVLPV*CPNRLG
Trigger: ACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACAGC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGCCAAAGACTGAGGCCTaGCCGAAGGTTGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVPKTEA*PKVVCP
Trigger: TGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGG...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAAAGACTGAGGCCTaGCCGAAGGTTGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVPKTEA*PKVVCP
Trigger: TGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGCACTGCTCGCCGACTaGCCAAAGACTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQALLAD*PKTEAC
Trigger: GCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGAGACACTTGCAGCACTaGTCGCCGACTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAERHLQH*SPTAQR
Trigger: TCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAGACACTTGCAGCACTaGTCGCCGACTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERRHLQH*SPTAQR
Trigger: TCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGAAGGAAAAGACACTTaGAGCACTGCTCGCCGACTG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMREGKDT*STARRL
Trigger: CAGTCGGCGAGCAGTGCTGCAAGTGTCTTTTCCTTC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGAAGGAAAAGACACTTaGAGCACTGCTCGCCGACTG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACEGKDT*STARRL
Trigger: CAGTCGGCGAGCAGTGCTGCAAGTGTCTTTTCCTTC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCAAAAGCAGGAGCGTTaGTTTGGCCAAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERQKQER*FGQTAP
Trigger: GGGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAAAGCCAGGACTCTaGCCAAAAGCAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVPKPGL*PKAGAL
Trigger: CAACGCTCCTGCTTTTGGGCAGAGTCCTGGCTTTGG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGCTGAACCCAGAGGTTaGTGCTGTTGTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMAEPRG*CCCGGS
Trigger: GCTGCCACCACAACAGCAGCAACCTCTGGGTTCAGC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGTGCCAGTGGGTTTCTaGTCTCCAAACGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEVPVGF*SPNDEL
Trigger: CAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCAC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGTGCCAGTGGGTTTCTaGTCTCCAAACGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVVPVGF*SPNDEL
Trigger: CAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCAC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCCTCTCCGAACACTTTaGCTCCCGTCGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGPLRTL*LPSSPE
Trigger: CTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCGCTGGCAGCTGCAGTaGCCTCTCCGAACACTTTGC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGRWQLQ*PLRTLC
Trigger: GCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSCAGS*SALSEH
Trigger: GTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGAAACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKKPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCATGTGGTGTTGCTGCTaGTCCCAAACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAMWCCC*SQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACAT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCATGTGGTGTTGCTGCTaGTCCCAAACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIMWCCC*SQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACAT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAERRMWC*CCSQTR
Trigger: TCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCTGAAACTCAACTGCTaGTGGCATGAGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPLKLNC*WHEWLP
Trigger: AGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGCCCGCTCGGGAATCATaGCATCCATCTCGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWPARES*HPSRLP
Trigger: TGGGAGACGAGATGGATGCCATGATTCCCGAGCGGG...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAAATCTGCAAGCCACTaGCTCCACCAGCGAAGACCA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAKSASH*LHQRRP
Trigger: TGGTCTTCGCTGGTGGAGCCAGTGGCTTGCAGATTT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAAATCTGCAAGCCACTaGCTCCACCAGCGAAGACCA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAKSASH*LHQRRP
Trigger: TGGTCTTCGCTGGTGGAGCCAGTGGCTTGCAGATTT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCCAGCTGCTTTCCTTTaGGGCTCCAGCACACAGAGG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMPAAFL*GSSTQR
Trigger: CCTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGG...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAGCCATCACCACATCTaGAGACGTTTCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERSHHHI*RRFQGP
Trigger: GGGACCCTGGAAACGTCTCCAGATGTGGTGATGGCT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTACTTCCTGGTGACTTaGGCTGTCGCTCTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPYFLVT*AVALLL
Trigger: TAGAAGGAGAGCGACAGCCCAAGTCACCAGGAAGTA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAGACACACTTGGCACTaGTGTGCTTTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACRHTWH*CAFQGR
Trigger: CCTACCCTGGAAAGCACACCAGTGCCAAGTGTGTCT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTGGAGCAGACACACTTaGCACTGGTGTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIWSRHT*HWCAFQ
Trigger: CTGGAAAGCACACCAGTGCCAAGTGTGTCTGCTCCA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTGGAGCAGACACACTTaGCACTGGTGTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRWSRHT*HWCAFQ
Trigger: CTGGAAAGCACACCAGTGCCAAGTGTGTCTGCTCCA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCATCGGGGGTGCGCTCTaGGAGCTACTAACAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVIGGAL*ELLTGV
Trigger: TACTCCTGTTAGTAGCTCCCAGAGCGCACCCCCGAT...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000451030.5
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGGAGGCAGAAGAGAATaGCGACATCGGGGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGGGRRE*RHRGCA
Trigger: AGCGCACCCCCGATGTCGCCATTCTCTTCTGCCTCC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGTGTGGGGTGGCTGAGTaGTCCAGAAGCAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWCGVAE*SRSSWL
Trigger: AAGCCAGCTGCTTCTGGACCACTCAGCCACCCCACA...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTGCCTGGGGAGAGCCTaGCTTTGCCGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSCLGRA*LCRWRG
Trigger: ACCCCTCCAGCGGCAAAGCCAGGCTCTCCCCAGGCA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCAGTGTCTCTCGCTCTaGCACAAGCAGGTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEQCLSL*HKQVPL
Trigger: CAAAGGCACCTGCTTGTGCCAGAGCGAGAGACACTG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGGGGGACAGTTTGGCTaGTACTTTGGGCAAGGATTT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPGGQFG*YFGQGF
Trigger: AAATCCTTGCCCAAAGTACCAGCCAAACTGTCCCCC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTCATGGGGGACAGTTTaGCTGGTACTTTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRSWGTV*LVLWAR
Trigger: CCTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTCATGGGGGACAGTTTaGCTGGTACTTTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASWGTV*LVLWAR
Trigger: CCTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTCATGGGGGACAGTTTaGCTGGTACTTTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPASWGTV*LVLWAR
Trigger: CCTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCAGTGGATCTCACTGGTaGGGTCTTCCTCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGISGSHW*GLPLGQ
Trigger: TTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCTGATCGAGACAGGCTaGCTGGAGCAGTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVLIETG*LEQWIS
Trigger: TGAGATCCACTGCTCCAGCCAGCCTGTCTCGATCAG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCTGATCGAGACAGGCTaGCTGGAGCAGTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERLIETG*LEQWIS
Trigger: TGAGATCCACTGCTCCAGCCAGCCTGTCTCGATCAG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCTGATCGAGACAGGCTaGCTGGAGCAGTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAELIETG*LEQWIS
Trigger: TGAGATCCACTGCTCCAGCCAGCCTGTCTCGATCAG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGCAAAAGGTGCTGCATaGGGCAAGAGACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMAKGAA*GKRLGW
Trigger: CCAGCCCAGTCTCTTGCCCCATGCAGCACCTTTTGC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCAAAGTGTTTACAGCTaGTGCCTGACTGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTQSVYS*CLTGHL
Trigger: CAGATGGCCAGTCAGGCACCAGCTGTAAACACTTTG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCACTGGGGTCAACACTaGGTGAGGTGTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRHWGQH*VRCFGC
Trigger: ACAGCCAAAACACCTCACCCAGTGTTGACCCCAGTG...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTTTGGTTAGCAGCCACTaGGGTCAACACTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTLVSSH*GQHWVR
Trigger: CCTCACCCAGTGTTGACCCCAGTGGCTGCTAACCAA...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGAGAATGCGTCCGGCTaGCTTGACTCTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACENASG*LDSLVE
Trigger: CTCCACTAAAGAGTCAAGCCAGCCGGACGCATTCTC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTCCCAGCTTGGACGGTaGGGTTTCCAGCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDASQLGR*GFQLTR
Trigger: TCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGACGTCTTGGTTGGCTaGGTACTAGTTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: KLRMRLVPGIERPADTPSDVLVG*VLVRLV
Trigger: CACAAGCCTAACTAGTACCCAGCCAACCAAGACGTC...TGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTTGAGGAAGTGCTGGTaGCTGCTGGTGGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVLRKCW*LLVVLL
Trigger: CAGTAGCACCACCAGCAGCCACCAGCACTTCCTCAA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCAGTTGAGGAAGTGCTaGTGGCTGCTGGTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERQLRKC*WLLVVL
Trigger: TAGCACCACCAGCAGCCACCAGCACTTCCTCAACTG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTCCTGCACTGGTGACTaGCAGACTGCCAAAAACGGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSCTGD*QTAKNG
Trigger: GCCGTTTTTGGCAGTCTGCCAGTCACCAGTGCAGGA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTGGGGCACTGTGCTATTaGTCTGTTGGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCGALCY*SVGFQM
Trigger: CATTTGGAAGCCAACAGACCAATAGCACAGTGCCCC...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGAGCTGTAGTTGGTGGTaGGGCAGATGGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMSCSWW*GRWGHC
Trigger: ACAGTGCCCCCATCTGCCCCACCACCAACTACAGCT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATAGCTGTAGTTGGTGGTaGGGCAGATGGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDSCSWW*GRWGHC
Trigger: ACAGTGCCCCCATCTGCCCCACCACCAACTACAGCT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAGTACTGCCTCCGTCCTaGCATCAGGGACCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRVLPPS*HQGPPW
Trigger: CCACGGGGGTCCCTGATGCCAGGACGGAGGCAGTAC...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCAATGGACGTGGTGCTaGAGGCTATGGGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVQWTWC*RLWGYL
Trigger: CAAGTACCCCCATAGCCTCCAGCACCACGTCCATTG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCAATGGACGTGGTGCTaGAGGCTATGGGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVQWTWC*RLWGYL
Trigger: CAAGTACCCCCATAGCCTCCAGCACCACGTCCATTG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGCCCAAACACGGGCGTaGCAGAGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLAQTRA*QRGQWL
Trigger: CAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMDLVRC*LPLAQT
Trigger: TGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTGGCAGCTGCTGTGCTaGCTGTGCTACCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMWQLLC*LCYQSA
Trigger: AGCAGACTGGTAGCACAGCCAGCACAGCAGCTGCCA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTGGCAGCTGCTGTGCTaGCTGTGCTACCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGWQLLC*LCYQSA
Trigger: AGCAGACTGGTAGCACAGCCAGCACAGCAGCTGCCA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGCTGTCCAAAGACCCCTaGGGCTGTGGTACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVLSKDP*GCGTKS
Trigger: GCTTTTGGTACCACAGCCCCAGGGGTCTTTGGACAG...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAGACACTTCCACTGGTaGATGTGGGAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDARHFHW*MWEWRK
Trigger: CTTCCTCCACTCCCACATCCACCAGTGGAAGTGTCT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAGACACTTCCACTGGTaGATGTGGGAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRRHFHW*MWEWRK
Trigger: CTTCCTCCACTCCCACATCCACCAGTGGAAGTGTCT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCAGGAACTGGAGCTACTaGTACTTGAGGCGGCACCAA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIRNWSY*YLRRHQ
Trigger: TTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAGGAACTGGAGCTACTaGTACTTGAGGCGGCACCAA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKARNWSY*YLRRHQ
Trigger: TTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAGGAACTGGAGCTACTaGTACTTGAGGCGGCACCAA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACRNWSY*YLRRHQ
Trigger: TTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGCTGCTGTTGTGGTaGCAGCTGAGGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRLLLLW*QLRYHQ
Trigger: TTGGTGGTACCTCAGCTGCCACCACAACAGCAGCAA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTTGCTGCTGTTGTGGTaGCAGCTGAGGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKALLLLW*QLRYHQ
Trigger: TTGGTGGTACCTCAGCTGCCACCACAACAGCAGCAA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCAAACACGCTACCACTaGAAGAGGATGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGQTRYH*KRMIAG
Trigger: GCCAGCAATCATCCTCTTCCAGTGGTAGCGTGTTTG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGAAAACCCAAAGCCTTaGGATGCCACACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGENPKP*DATLPP
Trigger: AGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGAAAACCCAAAGCCTTaGGATGCCACACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPENPKP*DATLPP
Trigger: AGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAGGGCTGCCAAACACTaGAGCAGCACCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGRAAKH*SSTEAT
Trigger: GGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRTVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCGGCCCCCTCCTCTCTaGAGTAGGACACATGGCACC +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFRPPPL*SRTHGT
Trigger: GGTGCCATGTGTCCTACTCCAGAGAGGAGGGGGCCG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTTGTCTTCACACTTCCTaGGTCTACCCAAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCCLHTS*VYPRAI
Trigger: GATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGGGAGTACTTCCTGGTaGCTTGGGCTGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHGSTSW*LGLSLS
Trigger: GGAGAGCGACAGCCCAAGTCACCAGGAAGTACTCCC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCACTGAGACAGAAAGGCTaGTCGAGACAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPLRQKG*SRQAGW
Trigger: CCAGCCAGCCTGTCTCGATCAGCCTTTCTGTCTCAG...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGTGCTATCGGCCCCTTaGGGAATAATTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGVLSAP*GIILLA
Trigger: TGCTAGCAAAATTATTCCTCAAGGGGCCGATAGCAC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGGGGTCAACACTGGGTaGGGTGTTTTGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKGVNTG*GVLAVE
Trigger: CTCCACAGCCAAAACACCTCACCCAGTGTTGACCCC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGTCACCAGATGATAACTaGCCGGATGCTGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVSPDDN*PDAGVG
Trigger: GCCTACACCAGCATCCGGTCAGTTATCATCTGGTGA...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTCACCAGATGATAACTaGCCGGATGCTGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSPDDN*PDAGVG
Trigger: GCCTACACCAGCATCCGGTCAGTTATCATCTGGTGA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGATGAGAAAGGCTTGCTaGACTGCCCAGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRMRKAC*TAQKQM
Trigger: CATCTGCTTCTGGGCAGTTCAGCAAGCCTTTCTCAT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTATGAGAAAGGCTTGCTaGACTGCCCAGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAMRKAC*TAQKQM
Trigger: CATCTGCTTCTGGGCAGTTCAGCAAGCCTTTCTCAT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTGTTTGATGCGGATGTaGTTCCTGAGGGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVCLMRM*FLREVS
Trigger: GCTCACCTCCCTCAGGAATCACATCCGCATCAAACA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGCCAACCCGCAGTCCTaGAAAACTTCCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMANPQS*KTSQSL
Trigger: GAGACTCTGGGAAGTTTTTCAGGACTGCGGGTTGGC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCGGATGAGCCAGAAGTaGCGGTACCAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDRMSQK*RYQMLL
Trigger: CAGCAGCATTTGGTACCGTCACTTCTGGCTCATCCG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTGAGCAAAGACGGATaGGCCAGAAGTGACGGTACC +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGLSKDG*ARSDGT
Trigger: GGTACCGTCACTTCTGGCTCATCCGTCTTTGCTCAG...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCGACTGCCCAAAGACTaGGGCCTGCCCGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQRLPKD*GLPEGC
Trigger: ACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCGACTGCCCAAAGACTaGGGCCTGCCCGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFRLPKD*GLPEGC
Trigger: ACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGGAGCTACTGGTACTTaGGGCGGCACCAAAGACACT +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGGATGT*GGTKDT
Trigger: AGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGACTAGACCCAAAACCTaGAGCTTGGCAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GIERPADTPSASPATKTLTRPKT*SLAKAE
Trigger: TTCAGCTTTTGCCAAGCTTCAGGTTTTGGGTCTAGT...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR TCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCCCCACTGGCCGAGCTaGATGGGTTTTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGPHWPS*MGFCWL
Trigger: CAGCCAACAAAAACCCATTCAGCTCGGCCAGTGGGG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDFLLQS*KCQWVS
Trigger: AGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAA...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSLLGQ*SESGGI
Trigger: AATGCCCCCACTTTCGGATCACTGTCCCAACAGACT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAESLLGQ*SESGGI
Trigger: AATGCCCCCACTTTCGGATCACTGTCCCAACAGACT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCGACAGACGAGTTATTTaGCCCAAAGCTGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVDRRVI*PKAEPS
Trigger: GGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTC...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGACAGACGAGTTATTTaGCCCAAAGCTGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRDRRVI*PKAEPS
Trigger: GGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQSRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCCTCAAAAAGATaGCCCACCAGCATTCAACCT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPSASKR*PTSIQP
Trigger: AGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGCTGTCTTCTCAAGTaGCCGGCCCCCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSGCLLK*PAPSSL
Trigger: CAGAGAGGAGGGGGCCGGTCACTTGAGAAGACAGCC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGACCACCTCCTGTGCCTaGTCCAAAACCAGAGAATCC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAETTSCA*SKTRES
Trigger: GGATTCTCTGGTTTTGGATCAGGCACAGGAGGTGGT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTATCAGCCAGACAAACTaGCACCATGGAGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVISQTN*HHGGDS
Trigger: ACTGTCCCCTCCATGGTGGCAGTTTGTCTGGCTGAT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCACACAGAGGTTACTaGTACCGTGGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAAHRGY*YRGRKS
Trigger: ACTCTTCCTTCCACGGTAGCAGTAACCTCTGTGTGC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTTCCAGGGTCCCATCTaGAGCAGCATACACTATGGC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVFQGPI*SSIHYG
Trigger: GCCATAGTGTATGCTGCTGCAGATGGGACCCTGGAA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTCTCCTTCTGAAAGTGTaGAATCTCCTCCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCLLLKV*NLLPNS
Trigger: GGAATTGGGGAGGAGATTGCACACTTTCAGAAGGAG...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTTTACAGGACGTCCGTaGATCTTCACTCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGFTGRP*IFTLQR
Trigger: TCTCTGGAGAGTGAAGATGCACGGACGTCCTGTAAA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTCGTGGCAAGCATTGTaGTATCGGCCCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERSWQAL*YRPLEE
Trigger: TTCCTCAAGGGGCCGATAGCACAATGCTTGCCACGA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTTTATTAGAGACCCCTaGTTGGCTTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTFIRDP*LAWLAA
Trigger: GGCTGCTAACCAAGCCAAGCAGGGGTCTCTAATAAA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAAAGGCTTGCTGAACTaGCCAGAAGCAGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAKGLLN*PEADGV
Trigger: AACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTTTAGTGGAGGGTGTTaGCCCTTGTGCAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAFSGGC*PLCSSE
Trigger: TTCACTGCTGCACAAGGGGCAACACCCTCCACTAAA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTTAGTGGAGGGTGTTaGCCCTTGTGCAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACFSGGC*PLCSSE
Trigger: TTCACTGCTGCACAAGGGGCAACACCCTCCACTAAA...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCCTCATAAGAAGGTTTaGTTCCCCCACCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPPHKKV*FPHQMR
Trigger: TCTCATCTGGTGGGGGAAGCAAACCTTCTTATGAGG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTTTTGTAGAATCATCTaGTTGGCCAACCCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTFCRII*LANPQS
Trigger: GGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCAGATGGGGGCACTGTaGTATTGGTCTGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVQMGAL*YWSVGF
Trigger: GAAGCCAACAGACCAATAGCACAGTGCCCCCATCTG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATAGCTGGGCTGACTGTTaGTCCTCTAGAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDSWADC*SSRSEA
Trigger: AGCCTCACTTCTAGAGGAGCAACAGTCAGCCCAGCT...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAGCTGGGCTGACTGTTaGTCCTCTAGAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSWADC*SSRSEA
Trigger: AGCCTCACTTCTAGAGGAGCAACAGTCAGCCCAGCT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGGAAGCAGGTGGTACTaGCTCCGTCCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFGSRWY*LRPGIR
Trigger: CCTGATGCCAGGACGGAGGCAGTACCACCTGCTTCC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGCTGTGACAGCAGTCTaGCCAGGCACAGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMAVTAV*PGTEKE
Trigger: CTCCTTTTCTGTGCCTGGGCAGACTGCTGTCACAGC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGCTGTGACAGCAGTCTaGCCAGGCACAGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGAVTAV*PGTEKE
Trigger: CTCCTTTTCTGTGCCTGGGCAGACTGCTGTCACAGC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCAACAATGGACGTGGTaGTGGAGGCTATGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDQQWTW*WRLWGY
Trigger: GTACCCCCATAGCCTCCAGCACCACGTCCATTGTTG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAATGCTGCTGCCTCTaGAGATGGGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGKCCCL*RWAGSN
Trigger: GTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCATTT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGACAGACTTGGTGCGGTaGTGGCTGCCACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGTDLVR*WLPLAQ
Trigger: TTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGCTGTGCTACCAGTCTaGTGCCCAAACAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVAVLPV*CPNRLG
Trigger: ACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACAGC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGTGTGGCAGCTGCTGTaGTGGCTGTGCTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKVWQLL*WLCYQS
Trigger: AGACTGGTAGCACAGCCAGCACAGCAGCTGCCACAC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATAGACACTTGCAGCACTaGTCGCCGACTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDRHLQH*SPTAQR
Trigger: TCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTTAGACACTTGCAGCACTaGTCGCCGACTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LTRPQLRQPPKPWTDELFRHLQH*SPTAQR
Trigger: TCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCT...AAATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATGAAGGAAAAGACACTTaGAGCACTGCTCGCCGACTG +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDEGKDT*STARRL
Trigger: CAGTCGGCGAGCAGTGCTGCAAGTGTCTTTTCCTTC...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCCAAAGCCAGGACTCTaGCCAAAAGCAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDPKPGL*PKAGAL
Trigger: CAACGCTCCTGCTTTTGGGCAGAGTCCTGGCTTTGG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTCCACCAGTACTGGCTaGTTGACCAAACACAGAACC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPASTSTG*LTKHRT
Trigger: GGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTGGGTTTTTGTTGGCTaGATCCTGACTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTWVFVG*ILTGFS
Trigger: GGAAAACCCAGTCAGGATGCAGCCAACAAAAACCCA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGTGCCAGTGGGTTTCTaGTCTCCAAACGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMVPVGF*SPNDEL
Trigger: CAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCAC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCCTCTCCGAACACTTTaGCTCCCGTCGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFPLRTL*LPSSPE
Trigger: CTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCCACCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTCCTCCTCTCCGAACACTTTaGCTCCCGTCGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QPPKPWTDELFDPKLNPPPLRTL*LPSSPE
Trigger: CTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGG...AGGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCCTCTCCGAACACTTTaGCTCCCGTCGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQPLRTL*LPSSPE
Trigger: CTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACAAACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHKPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTT...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCAGGATGTGGTGTTGCTaGTGCTCCCAAACCCGAATC +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETRMWCC*CSQTRI
Trigger: GATTCGGGTTTGGGAGCAGCAGCAACACCACATCCT...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGRRMWC*CCSQTR
Trigger: TCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCG...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGATGAGTGGCTTCCTCTaGCTCCACTCAATCGCAGAG +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERMSGFL*LHSIAE
Trigger: CTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCAT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGACTCGAGCGTTCCTTaGGCAATTCCTCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGDSSVP*AIPQGS
Trigger: ACTCCCCTGAGGAATTGCCCAAGGAACGCTCGAGTC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTACTTCCTGGTGACTTaGGCTGTCGCTCTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAYFLVT*AVALLL
Trigger: TAGAAGGAGAGCGACAGCCCAAGTCACCAGGAAGTA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGGCTTGAGAGGAGGTTaGGGTAGTGGGAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMGLRGG*GSGSTS
Trigger: GGAAGTACTCCCACTACCCCAACCTCCTCTCAAGCC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGGAGGCAGAAGAGAATaGCGACATCGGGGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHGGRRE*RHRGCA
Trigger: AGCGCACCCCCGATGTCGCCATTCTCTTCTGCCTCC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGAGGCAGAAGAGAATaGCGACATCGGGGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGGRRE*RHRGCA
Trigger: AGCGCACCCCCGATGTCGCCATTCTCTTCTGCCTCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGGAGGCAGAAGAGAATaGCGACATCGGGGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFGGRRE*RHRGCA
Trigger: AGCGCACCCCCGATGTCGCCATTCTCTTCTGCCTCC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTTGGTCCAGAAGCAGCTaGCTTGGAGGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTWSRSS*LGGRRE
Trigger: TTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGGACCA...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTGTGGGGTGGCTGAGTaGTCCAGAAGCAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGCGVAE*SRSSWL
Trigger: AAGCCAGCTGCTTCTGGACCACTCAGCCACCCCACA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCAGTGTCTCTCGCTCTaGCACAAGCAGGTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGQCLSL*HKQVPL
Trigger: CAAAGGCACCTGCTTGTGCCAGAGCGAGAGACACTG...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGTTTGGCTGGTACTTTaGGCAAGGATTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPVWLVL*ARIWCE
Trigger: CTCACACCAAATCCTTGCCCAAAGTACCAGCCAAAC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTCATGGGGGACAGTTTaGCTGGTACTTTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSWGTV*LVLWAR
Trigger: CCTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGTTGTGCCTGTTTCATaGGGGACAGTTTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAVVPVS*GTVWLV
Trigger: TACCAGCCAAACTGTCCCCCATGAAACAGGCACAAC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCAGTGGATCTCACTGGTaGGGTCTTCCTCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETSGSHW*GLPLGQ
Trigger: TTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACT...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAGTGGATCTCACTGGTaGGGTCTTCCTCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSGSHW*GLPLGQ
Trigger: TTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTCGAGACAGGCTGGCTaGAGCAGTGGATCTCACTGG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKSRQAG*SSGSHW
Trigger: CCAGTGAGATCCACTGCTCCAGCCAGCCTGTCTCGA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCTGATCGAGACAGGCTaGCTGGAGCAGTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLIETG*LEQWIS
Trigger: TGAGATCCACTGCTCCAGCCAGCCTGTCTCGATCAG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCAAAGTGTTTACAGCTaGTGCCTGACTGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRQSVYS*CLTGHL
Trigger: CAGATGGCCAGTCAGGCACCAGCTGTAAACACTTTG...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGAGGTGTTTTGGCTGTaGAGTAGGGCACTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAEVFWL*SRALKN
Trigger: GTTCTTCAGTGCCCTACTCCACAGCCAAAACACCTC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTCCCAGCTTGGACGGTaGGGTTTCCAGCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSQLGR*GFQLTR
Trigger: TCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTCCAGCCAAAGAACTTaGAAACAGAAGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGSSQRT*KQKLSQ
Trigger: CTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGGA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGACGTCTTGGTTGGCTaGGTACTAGTTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACDVLVG*VLVRLV
Trigger: CACAAGCCTAACTAGTACCCAGCCAACCAAGACGTC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTTGAGGAAGTGCTGGTaGCTGCTGGTGGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMLRKCW*LLVVLL
Trigger: CAGTAGCACCACCAGCAGCCACCAGCACTTCCTCAA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTCCTGCACTGGTGACTaGCAGACTGCCAAAAACGGC +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGSCTGD*QTAKNG
Trigger: GCCGTTTTTGGCAGTCTGCCAGTCACCAGTGCAGGA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTCCTGCACTGGTGACTaGCAGACTGCCAAAAACGGC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMSCTGD*QTAKNG
Trigger: GCCGTTTTTGGCAGTCTGCCAGTCACCAGTGCAGGA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGGGGCACTGTGCTATTaGTCTGTTGGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACGALCY*SVGFQM
Trigger: CATTTGGAAGCCAACAGACCAATAGCACAGTGCCCC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTGGTGGTGGGGCAGATaGGGGCACTGTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGWWWGR*GHCAIG
Trigger: ACCAATAGCACAGTGCCCCCATCTGCCCCACCACCA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAGCTGTAGTTGGTGGTaGGGCAGATGGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGSCSWW*GRWGHC
Trigger: ACAGTGCCCCCATCTGCCCCACCACCAACTACAGCT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACAGTGGCAGCTGTAGTTaGTGGTGGGGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHSGSCS*WWGRWG
Trigger: CCCCCATCTGCCCCACCACCAACTACAGCTGCCACT...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTCCTGTGCCTAGTGGCAGCTGTAGTTaGTGGTGGGGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: PKPWTDELFDPKLNPPVPSGSCS*WWGRWG
Trigger: CCCCCATCTGCCCCACCACCAACTACAGCTGCCACT...AGGCACAGGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGGAGCCTGGGGAAGCTaGGCTGACTGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHGAWGS*ADCCSS
Trigger: AGAGGAGCAACAGTCAGCCCAGCTTCCCCAGGCTCC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGACCCCCGTGGTGGCTaGGGTAGCCTCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSDPRGG*GSLCRK
Trigger: CTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTGGTGCTGGAGGCTATaGGGGTACTTGATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIWCWRL*GYLMFR
Trigger: TCGAAACATCAAGTACCCCCATAGCCTCCAGCACCA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGCCGGGAGCAACAATaGACGTGGTGCTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGREQQ*TWCWRL
Trigger: TAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCTGTCCAAAGACCCCTaGGGCTGTGGTACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLSKDP*GCGTKS
Trigger: GCTTTTGGTACCACAGCCCCAGGGGTCTTTGGACAG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATAGACACTTCCACTGGTaGATGTGGGAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDRHFHW*MWEWRK
Trigger: CTTCCTCCACTCCCACATCCACCAGTGGAAGTGTCT...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAGACACTTCCACTGGTaGATGTGGGAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVRHFHW*MWEWRK
Trigger: CTTCCTCCACTCCCACATCCACCAGTGGAAGTGTCT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGCAAAGACACTTCCACTaGTGGATGTGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVQRHFH*WMWEWR
Trigger: CCTCCACTCCCACATCCACCAGTGGAAGTGTCTTTG...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAGGAACTGGAGCTACTaGTACTTGAGGCGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVRNWSY*YLRRHQ
Trigger: TTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTTGCTGCTGTTGTGGTaGCAGCTGAGGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVLLLLW*QLRYHQ
Trigger: TTGGTGGTACCTCAGCTGCCACCACAACAGCAGCAA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTTGCTGCTGTTGTGGTaGCAGCTGAGGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERLLLLW*QLRYHQ
Trigger: TTGGTGGTACCTCAGCTGCCACCACAACAGCAGCAA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCTATTCCACCAGTACTaGCTGCTTGACCAAACACAG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGLFHQY*LLDQTQ
Trigger: CTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCAAACACGCTACCACTaGAAGAGGATGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAQTRYH*KRMIAG
Trigger: GCCAGCAATCATCCTCTTCCAGTGGTAGCGTGTTTG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCAAACACGCTACCACTaGAAGAGGATGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAQTRYH*KRMIAG
Trigger: GCCAGCAATCATCCTCTTCCAGTGGTAGCGTGTTTG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTGGCTGCATCCTGACTaGGTTTTCCTCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGWLHPD*VFLQGH
Trigger: GTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATTGGCTGCATCCTGACTaGGTTTTCCTCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDWLHPD*VFLQGH
Trigger: GTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCA...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCACTGGCCGAGCTGAATaGGTTTTTGTTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVTGRAE*VFVGCI
Trigger: GATGCAGCCAACAAAAACCCATTCAGCTCGGCCAGT...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAAAACCCAAAGCCTTaGGATGCCACACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAENPKP*DATLPP
Trigger: AGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERTVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAAACTCAACTGCTGCTaGCATGAGTGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACKLNCC*HEWLPL
Trigger: CAGAGGAAGCCACTCATGCCAGCAGCAGTTGAGTTT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGGTGGTTAGTAGACACTaGGTAGGTGTGGCTACCAAT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTVVSRH*VGVATN
Trigger: ATTGGTAGCCACACCTACCCAGTGTCTACTAACCAC...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGTGCAGTGATGAGCTCTaGGCCGTCCTAGCAAACACT +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAECSDEL*AVLANT
Trigger: AGTGTTTGCTAGGACGGCCCAGAGCTCATCACTGCA...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGGGATCTGCTCTCATTaGACTTTCTCCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMGICSH*TFSQER
Trigger: CCGCTCCTGGGAGAAAGTCCAATGAGAGCAGATCCC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCCTCTGTGCTTCTTGTaGGAAGCCCTCCGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFPLCFL*EALRAS
Trigger: GGAGGCACGGAGGGCTTCCCACAAGAAGCACAGAGG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGATCGGGGGTGCGCTCTaGGAGTTTTCACTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERIGGAL*EFSLRL
Trigger: CAACCTTAGTGAAAACTCCCAGAGCGCACCCCCGAT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652454.1
CDS-3UTR TCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTTTAGCGCTCTAAACTaGAAATCCTTCATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPFSALN*KSFISR
Trigger: GCGGGAGATGAAGGATTTTCAGTTTAGAGCGCTAAA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCCAGCTCAAGGCCAGGTaGTGGATTGGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIQLKAR*WIGNFI
Trigger: TATGAAATTCCCAATCCATCACCTGGCCTTGAGCTG...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTGCACGCAGAGAGTGTaGGGTTATCACAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMCTQRV*GYHSSR
Trigger: CCTTGAGCTGTGATAACCTCACACTCTCTGCGTGCA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCTTTCACTGTTTCCGTaGCTTGCAGGACAGCAATAC +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPALSLFP*LAGQQY
Trigger: GTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTCTGACAGGATGATCTaGCTCATAAAACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTSDRMI*LIKRRT
Trigger: TGTCCTCCGTTTTATGAGTCAGATCATCCTGTCAGA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATACTAACTTCTGTTaGAGCCGCAGATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEDTNFC*SRRCCQ
Trigger: CTGGCAGCATCTGCGGCTTCAACAGAAGTTAGTATC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGGGAGTACTTCCTGGTaGCTTGGGCTGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTGSTSW*LGLSLS
Trigger: GGAGAGCGACAGCCCAAGTCACCAGGAAGTACTCCC...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTCTACTTATATCTCCATaGAGCGACTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCLLISP*SDSVVS
Trigger: AGAGACCACAGAGTCGCTTCATGGAGATATAAGTAG...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCTACTTATATCTCCATaGAGCGACTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGLLISP*SDSVVS
Trigger: AGAGACCACAGAGTCGCTTCATGGAGATATAAGTAG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTCACTGTCAAAACTGTaGATGCTGCTCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDASLSKL*MLLWEG
Trigger: TCCTTCCCAGAGCAGCATTCACAGTTTTGACAGTGA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCAGATGACGTTGAGCTaGCTTCATCCAAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGQMTLS*LHPSLH
Trigger: ATGAAGACTTGGATGAAGTCAGCTCAACGTCATCTG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCAGATGACGTTGAGCTaGCTTCATCCAAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTQMTLS*LHPSLH
Trigger: ATGAAGACTTGGATGAAGTCAGCTCAACGTCATCTG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGCGTGCCGAGGGGCCTaGACCACTGCCTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETACRGA*TTASSS
Trigger: AGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTCCCATCACACCAGGTaGAGAACCATGAACCAGGTG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMSHHTR*RTMNQV
Trigger: CACCTGGTTCATGGTTCTTCACCTGGTGTGATGGGA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGTGCTATCGGCCCCTTaGGGAATAATTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIVLSAP*GIILLA
Trigger: TGCTAGCAAAATTATTCCTCAAGGGGCCGATAGCAC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGGGTCAACACTGGGTaGGGTGTTTTGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGVNTG*GVLAVE
Trigger: CTCCACAGCCAAAACACCTCACCCAGTGTTGACCCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGGGGTCAACACTGGGTaGGGTGTTTTGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHGVNTG*GVLAVE
Trigger: CTCCACAGCCAAAACACCTCACCCAGTGTTGACCCC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGAGAAGCAGATGGGGTTaGAGTCACAGCTGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTRSRWG*SHSCFY
Trigger: ATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGATGAGAAAGGCTTGCTaGACTGCCCAGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEMRKAC*TAQKQM
Trigger: CATCTGCTTCTGGGCAGTTCAGCAAGCCTTTCTCAT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTGCGTCCGGCTGGCTTaGCTCTTTAGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHCVRLA*LFSGGC
Trigger: ACACCCTCCACTAAAGAGTCAAGCCAGCCGGACGCA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATTGTTTGATGCGGATGTaGTTCCTGAGGGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDCLMRM*FLREVS
Trigger: GCTCACCTCCCTCAGGAATCACATCCGCATCAAACA...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGCCAACCCGCAGTCCTaGAAAACTTCCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGANPQS*KTSQSL
Trigger: GAGACTCTGGGAAGTTTTTCAGGACTGCGGGTTGGC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGGAGGGGGTAGTTGCTaGACTCAGGAGGCTACCAAA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKGGGSC*TQEATK
Trigger: TTTGGTAGCCTCCTGAGTTCAGCAACTACCCCCTCC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACCAGTGCCAGAGTTGCTaGCTGCAGGCTGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHQCQSC*LQAGQE
Trigger: TTCTTGCCCAGCCTGCAGTCAGCAACTCTGGCACTG...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCAGTGCCAGAGTTGCTaGCTGCAGGCTGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQQCQSC*LQAGQE
Trigger: TTCTTGCCCAGCCTGCAGTCAGCAACTCTGGCACTG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGGCTATGGGGGTACTTaGTGTTTCGACGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFGYGGT*CFDGHR
Trigger: CCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCGGATGAGCCAGAAGTaGCGGTACCAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGRMSQK*RYQMLL
Trigger: CAGCAGCATTTGGTACCGTCACTTCTGGCTCATCCG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCTGAGCAAAGACGGATaGGCCAGAAGTGACGGTACC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGLSKDG*ARSDGT
Trigger: GGTACCGTCACTTCTGGCTCATCCGTCTTTGCTCAG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTGGGCTGCTAAACCCTaGGCTGCTGACCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHWAAKP*AADLWC
Trigger: ACACCACAGGTCAGCAGCTCAGGGTTTAGCAGCCCA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACGACTGCCCAAAGACTaGGGCCTGCCCGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRRLPKD*GLPEGC
Trigger: ACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCG...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGGAGCTACTGGTACTTaGGGCGGCACCAAAGACACT +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKGATGT*GGTKDT
Trigger: AGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGACTAGACCCAAAACCTaGAGCTTGGCAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTTRPKT*SLAKAE
Trigger: TTCAGCTTTTGCCAAGCTTCAGGTTTTGGGTCTAGT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCCCCACTGGCCGAGCTaGATGGGTTTTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFPHWPS*MGFCWL
Trigger: CAGCCAACAAAAACCCATTCAGCTCGGCCAGTGGGG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMFLLQS*KCQWVS
Trigger: AGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGTATTTGACCCAAAGCTaGACCCTCCTGTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVYLTQS*TLLCLI
Trigger: GATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATA...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTATTTGACCCAAAGCTaGACCCTCCTGTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVYLTQS*TLLCLI
Trigger: GATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTATTTGACCCAAAGCTaGACCCTCCTGTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERYLTQS*TLLCLI
Trigger: GATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGACAGACGAGTTATTTaGCCCAAAGCTGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEDRRVI*PKAEPS
Trigger: GGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACACTCCCCGCTGCTCATaGCCCAAGCCAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHTPRCS*PKPKHC
Trigger: ACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGT...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACGGGCTTGAACTGCCCTaGGCAGATCGTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHGLELP*ADRPAD
Trigger: ATCAGCAGGACGATCTGCTCAGGGCAGTTCAAGCCC...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTTAGTAGGAAAAATCTaGAAGCCACTGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGLVGKI*KPLAPP
Trigger: TGGTGGAGCCAGTGGCTTGCAGATTTTTCCTACTAA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCACTGTTTCCGTGACTTaGAGGACAGCAATACTACCA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPTVSVT*RTAILP
Trigger: TGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGGAAGGAGGGCTTCATTaGTATATTTGGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTEGGLH*YIWSRH
Trigger: GTGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTC...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCTCCTTCTGAAAGTGTaGAATCTCCTCCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKALLLKV*NLLPNS
Trigger: GGAATTGGGGAGGAGATTGCACACTTTCAGAAGGAG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCTCCTTCTGAAAGTGTaGAATCTCCTCCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDALLLKV*NLLPNS
Trigger: GGAATTGGGGAGGAGATTGCACACTTTCAGAAGGAG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTCATCTCCTCAGAAGTaGCCACTTGGAAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPASSPQK*PLGNRL
Trigger: AAGCCTGTTTCCAAGTGGGCACTTCTGAGGAGATGA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATCAAAACTGTGAATGCTaGTCTGGGAAGGAACAGCCG +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDQNCEC*SGKEQP
Trigger: CGGCTGTTCCTTCCCAGAGCAGCATTCACAGTTTTG...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAAGTTTCTCAGTTGTaGCTGTTTCATGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAEVSQL*LFHGGQ
Trigger: CTGTCCCCCATGAAACAGGCACAACTGAGAAACTTC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCGTGGGAAGGACTAGGTaGACCATGTTTCACGGTTTT +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVVGRTR*TMFHGF
Trigger: AAAACCGTGAAACATGGTGCACCTAGTCCTTCCCAC...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGTGGGAAGGACTAGGTaGACCATGTTTCACGGTTTT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAVGRTR*TMFHGF
Trigger: AAAACCGTGAAACATGGTGCACCTAGTCCTTCCCAC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTGGCTGTAGAAGGGGTTaGAGGGTTATTCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCGCRRG*RVILQF
Trigger: GAATTGAAGAATAACCCTGCAACCCCTTCTACAGCC...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGGCTGTAGAAGGGGTTaGAGGGTTATTCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPGCRRG*RVILQF
Trigger: GAATTGAAGAATAACCCTGCAACCCCTTCTACAGCC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAAAGGCTTGCTGAACTaGCCAGAAGCAGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERKGLLN*PEADGV
Trigger: AACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGGGTGTTGCCCCTTGTaGAGCAGTGAAATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACGCCPL*SSEIRR
Trigger: TCTTCTAATTTCACTGCTGCACAAGGGGCAACACCC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGGTGTTGCCCCTTGTaGAGCAGTGAAATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAGCCPL*SSEIRR
Trigger: TCTTCTAATTTCACTGCTGCACAAGGGGCAACACCC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGGGTGTTGCCCCTTGTaGAGCAGTGAAATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAGCCPL*SSEIRR
Trigger: TCTTCTAATTTCACTGCTGCACAAGGGGCAACACCC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGTTTAGTGGAGGGTGTTaGCCCTTGTGCAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEFSGGC*PLCSSE
Trigger: TTCACTGCTGCACAAGGGGCAACACCCTCCACTAAA...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCCTCATAAGAAGGTTTaGTTCCCCCACCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAPHKKV*FPHQMR
Trigger: TCTCATCTGGTGGGGGAAGCAAACCTTCTTATGAGG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCCTCATAAGAAGGTTTaGTTCCCCCACCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAPHKKV*FPHQMR
Trigger: TCTCATCTGGTGGGGGAAGCAAACCTTCTTATGAGG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATAGCAGTTCCAGAAGGTaGCACAGGTCTGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDSSSRR*HRSAAR
Trigger: TCTAGCAGCAGACCTGTGGCACCTTCTGGAACTGCT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCGGCAGTTGAGGAAGTaGTGGTGGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSRQLRK*WWLLVV
Trigger: CACCACCAGCAGCCACCAGCACTTCCTCAACTGCCG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGACCCCAGAGGATCCTaGACTGGTGACTGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQDPRGS*TGDWQT
Trigger: AGTCTGCCAGTCACCAGTGCAGGATCCTCTGGGGTC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATAGCTGGGCTGACTGTTaGTCCTCTAGAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDSWADC*SSRSEA
Trigger: AGCCTCACTTCTAGAGGAGCAACAGTCAGCCCAGCT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGACTAGTACTAGATGCTaGAGTGCCAGAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDATSTRC*SARVAD
Trigger: GTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGAAGACTAGTACTAGATaGTGCAGTGCCAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGKTSTR*CSARVA
Trigger: AGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCAACAATGGACGTGGTaGTGGAGGCTATGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGQQWTW*WRLWGY
Trigger: GTACCCCCATAGCCTCCAGCACCACGTCCATTGTTG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGAAATGCTGCTGCCTCTaGAGATGGGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQKCCCL*RWAGSN
Trigger: GTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCATTT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGTGCTGGCTGCCACTTaGCCAAACACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLVLAAT*PNTGVA
Trigger: TGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCAC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGACAGACTTGGTGCGGTaGTGGCTGCCACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQTDLVR*WLPLAQ
Trigger: TTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCCCAAACAGACTTGGTaGGGTGCTGGCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQPKQTW*GAGCHL
Trigger: CAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGCTGTGCTACCAGTCTaGTGCCCAAACAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWAVLPV*CPNRLG
Trigger: ACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACAGC...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGTGTGGCAGCTGCTGTaGTGGCTGTGCTACCAGTCT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHVWQLL*WLCYQS
Trigger: AGACTGGTAGCACAGCCAGCACAGCAGCTGCCACAC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAGACACTTGCAGCACTaGTCGCCGACTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGRHLQH*SPTAQR
Trigger: TCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGAAGGAAAAGACACTTaGAGCACTGCTCGCCGACTG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMEGKDT*STARRL
Trigger: CAGTCGGCGAGCAGTGCTGCAAGTGTCTTTTCCTTC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCCAAAGCCAGGACTCTaGCCAAAAGCAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGPKPGL*PKAGAL
Trigger: CAACGCTCCTGCTTTTGGGCAGAGTCCTGGCTTTGG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGCTGAACCCAGAGGTTaGTGCTGTTGTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQAEPRG*CCCGGS
Trigger: GCTGCCACCACAACAGCAGCAACCTCTGGGTTCAGC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTCCACCAGTACTGGCTaGTTGACCAAACACAGAACC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVSTSTG*LTKHRT
Trigger: GGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCTGGAAGAGGATGATTaGTGGCCAAAGACTATTCCA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPLEEDD*WPKTIP
Trigger: TGGAATAGTCTTTGGCCAGCAATCATCCTCTTCCAG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACCTGGAAGAGGATGATTaGTGGCCAAAGACTATTCCA +
Preference number: 4 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDLEEDD*WPKTIP
Trigger: TGGAATAGTCTTTGGCCAGCAATCATCCTCTTCCAG...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCTGGGTTTTTGTTGGCTaGATCCTGACTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVWVFVG*ILTGFS
Trigger: GGAAAACCCAGTCAGGATGCAGCCAACAAAAACCCA...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTGGGTTTTTGTTGGCTaGATCCTGACTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIWVFVG*ILTGFS
Trigger: GGAAAACCCAGTCAGGATGCAGCCAACAAAAACCCA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGGGTTTTTGTTGGCTaGATCCTGACTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACWVFVG*ILTGFS
Trigger: GGAAAACCCAGTCAGGATGCAGCCAACAAAAACCCA...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGTGCCAGTGGGTTTCTaGTCTCCAAACGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKVPVGF*SPNDEL
Trigger: CAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCAC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCCTCTCCGAACACTTTaGCTCCCGTCGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSPLRTL*LPSSPE
Trigger: CTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCGCTGGCAGCTGCAGTaGCCTCTCCGAACACTTTGC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSRWQLQ*PLRTLC
Trigger: GCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGATGTGGTGTTGCTGCTaGTCCCAAACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMMWCCC*SQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACAT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTAGGATGTGGTGTTGCTaGTGCTCCCAAACCCGAATC +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGRMWCC*CSQTRI
Trigger: GATTCGGGTTTGGGAGCAGCAGCAACACCACATCCT...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCCACCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTCCTTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: QPPKPWTDELFDPKLNPPSDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...AGGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCTGAAACTCAACTGCTaGTGGCATGAGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVLKLNC*WHEWLP
Trigger: AGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCTCCCTTCCTCCTCCTaGCTTGGGCCTCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFLPSSS*LGPHQQ
Trigger: TTGCTGATGAGGCCCAAGGCAGGAGGAGGAAGGGAG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGTCTGCCCTCCTCTGTaGTTCTTGTGGGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHVCPPL*FLWEAL
Trigger: GAGGGCTTCCCACAAGAAGCACAGAGGAGGGCAGAC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTGGCGACATCGGGGGTaGGCTCTGGGAGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHWRHRG*ALGVFT
Trigger: AGTGAAAACTCCCAGAGCGCACCCCCGATGTCGCCA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACCCCGCTCGGGAATCATaGCATCCATCTCGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHPARES*HPSRLP
Trigger: TGGGAGACGAGATGGATGCCATGATTCCCGAGCGGG...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTGGAACCATATTCACTaGACATCATGCACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTWNHIH*TSCTQR
Trigger: TCTCTGCGTGCATGATGTCCAGTGAATATGGTTCCA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCCATGGAGGGGACAGTaGGGTTCCACTTCATATCAA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEPWRGQ*GSTSYQ
Trigger: TTGATATGAAGTGGAACCCCACTGTCCCCTCCATGG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGCTACGACAACTCCCATaGGCAAGGAGTCATCACTCT +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVLRQLP*ARSHHS
Trigger: AGAGTGATGACTCCTTGCCCATGGGAGTTGTCGTAG...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCTACGACAACTCCCATaGGCAAGGAGTCATCACTCT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERLRQLP*ARSHHS
Trigger: AGAGTGATGACTCCTTGCCCATGGGAGTTGTCGTAG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGGCTTGAGAGGAGGTTaGGGTAGTGGGAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKGLRGG*GSGSTS
Trigger: GGAAGTACTCCCACTACCCCAACCTCCTCTCAAGCC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGAAGAAAAAGTGGCAATaGGAGCAGCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTKKKWQ*EQQVMK
Trigger: CTTCATCACCTGCTGCTCCCATTGCCACTTTTTCTT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAGCTGTCGGAGCCACTaGAATATGAAGGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSCRSH*NMKGAP
Trigger: GGGAGCCCCCTTCATATTCCAGTGGCTCCGACAGCT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCTGGAGGGGTTATCCTaGGTGATTTCTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPALEGLS*VISVPL
Trigger: CAATGGTACAGAAATCACCCAGGATAACCCCTCCAG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCTGGAGGGGTTATCCTaGGTGATTTCTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRLEGLS*VISVPL
Trigger: CAATGGTACAGAAATCACCCAGGATAACCCCTCCAG...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTTGCCTGGGGAGAGCCTaGCTTTGCCGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETCLGRA*LCRWRG
Trigger: ACCCCTCCAGCGGCAAAGCCAGGCTCTCCCCAGGCA...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCTTTGGGCAAGGATTTaGTGTGAGATTCTATGGTGG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGLWARI*CEILWW
Trigger: CCACCATAGAATCTCACACCAAATCCTTGCCCAAAG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGTTTGGCTGGTACTTTaGGCAAGGATTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAVWLVL*ARIWCE
Trigger: CTCACACCAAATCCTTGCCCAAAGTACCAGCCAAAC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGTTTGGCTGGTACTTTaGGCAAGGATTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRVWLVL*ARIWCE
Trigger: CTCACACCAAATCCTTGCCCAAAGTACCAGCCAAAC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGGGGGGACAGTTTGGCTaGTACTTTGGGCAAGGATTT +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVGGQFG*YFGQGF
Trigger: AAATCCTTGCCCAAAGTACCAGCCAAACTGTCCCCC...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGTTGTGCCTGTTTCATaGGGGACAGTTTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVVVPVS*GTVWLV
Trigger: TACCAGCCAAACTGTCCCCCATGAAACAGGCACAAC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTTCGAGACAGGCTGGCTaGAGCAGTGGATCTCACTGG +
Preference number: 4 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTSRQAG*SSGSHW
Trigger: CCAGTGAGATCCACTGCTCCAGCCAGCCTGTCTCGA...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTCGAGACAGGCTGGCTaGAGCAGTGGATCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQSRQAG*SSGSHW
Trigger: CCAGTGAGATCCACTGCTCCAGCCAGCCTGTCTCGA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGTTTCACGGTTTTCGTaGCAAGCATTGTGCTATCGG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAVSRFS*QALCYR
Trigger: CCGATAGCACAATGCTTGCCACGAAAACCGTGAAAC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGTTTCACGGTTTTCGTaGCAAGCATTGTGCTATCGG +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACVSRFS*QALCYR
Trigger: CCGATAGCACAATGCTTGCCACGAAAACCGTGAAAC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGGGGCTGAGATGGGGTaGGAAGGACTAGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PEADGVEVTAVSILAVPEGAEMG*EGLGAP
Trigger: TGGTGCACCTAGTCCTTCCCACCCCATCTCAGCCCC...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGAGGTGTTTTGGCTGTaGAGTAGGGCACTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVEVFWL*SRALKN
Trigger: GTTCTTCAGTGCCCTACTCCACAGCCAAAACACCTC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGAGGTGTTTTGGCTGTaGAGTAGGGCACTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVEVFWL*SRALKN
Trigger: GTTCTTCAGTGCCCTACTCCACAGCCAAAACACCTC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGCACTGGGGTCAACACTaGGTGAGGTGTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWHWGQH*VRCFGC
Trigger: ACAGCCAAAACACCTCACCCAGTGTTGACCCCAGTG...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCACTGGGGTCAACACTaGGTGAGGTGTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMHWGQH*VRCFGC
Trigger: ACAGCCAAAACACCTCACCCAGTGTTGACCCCAGTG...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTTGGTTAGCAGCCACTaGGGTCAACACTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGLVSSH*GQHWVR
Trigger: CCTCACCCAGTGTTGACCCCAGTGGCTGCTAACCAA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGTGAGCTTTCAGGAATaGCCTCATAAGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPVSFQE*PHKKVC
Trigger: GCAAACCTTCTTATGAGGCCATTCCTGAAAGCTCAC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCTCCAGCCAAAGAACTTaGAAACAGAAGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGISSQRT*KQKLSQ
Trigger: CTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGGA...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTCCAGCCAAAGAACTTaGAAACAGAAGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASSQRT*KQKLSQ
Trigger: CTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGGA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGGTAGAATCATCTGCTTaGCCAACCCGCAGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVVESSA*PTRSPE
Trigger: TTCAGGACTGCGGGTTGGCCAAGCAGATGATTCTAC...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGTAGAATCATCTGCTTaGCCAACCCGCAGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVVESSA*PTRSPE
Trigger: TTCAGGACTGCGGGTTGGCCAAGCAGATGATTCTAC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGTAGAATCATCTGCTTaGCCAACCCGCAGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEVESSA*PTRSPE
Trigger: TTCAGGACTGCGGGTTGGCCAAGCAGATGATTCTAC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGACGTCTTGGTTGGCTaGGTACTAGTTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEDVLVG*VLVRLV
Trigger: CACAAGCCTAACTAGTACCCAGCCAACCAAGACGTC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTTGAGGAAGTGCTGGTaGCTGCTGGTGGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKLRKCW*LLVVLL
Trigger: CAGTAGCACCACCAGCAGCCACCAGCACTTCCTCAA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTTGAGGAAGTGCTGGTaGCTGCTGGTGGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGLRKCW*LLVVLL
Trigger: CAGTAGCACCACCAGCAGCCACCAGCACTTCCTCAA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGGGGCACTGTGCTATTaGTCTGTTGGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVGALCY*SVGFQM
Trigger: CATTTGGAAGCCAACAGACCAATAGCACAGTGCCCC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCAGCTGTAGTTGGTGGTaGGGCAGATGGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFSCSWW*GRWGHC
Trigger: ACAGTGCCCCCATCTGCCCCACCACCAACTACAGCT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAAAGGAGGAAGCAGGTaGTACTGCCTCCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHKGGSR*YCLRPG
Trigger: GCCAGGACGGAGGCAGTACCACCTGCTTCCTCCTTT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTGGTGCTGGAGGCTATaGGGGTACTTGATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERWCWRL*GYLMFR
Trigger: TCGAAACATCAAGTACCCCCATAGCCTCCAGCACCA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGAGCAACAATGGACGTaGTGCTGGAGGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFEQQWT*CWRLWG
Trigger: CCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGCCGGGAGCAACAATaGACGTGGTGCTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSGREQQ*TWCWRL
Trigger: TAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCTGCCCAAACAGACTTaGTGCGGTGCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSLPKQT*CGAGCH
Trigger: GTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGTCCAAAGACCCCTaGGGCTGTGGTACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKLSKDP*GCGTKS
Trigger: GCTTTTGGTACCACAGCCCCAGGGGTCTTTGGACAG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGAGACACTTCCACTGGTaGATGTGGGAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWRHFHW*MWEWRK
Trigger: CTTCCTCCACTCCCACATCCACCAGTGGAAGTGTCT...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCAAATGAGAAGGAACTaGAGCTACTGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPQMRRN*SYWYLR
Trigger: CCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCAAATGAGAAGGAACTaGAGCTACTGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTQMRRN*SYWYLR
Trigger: CCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACAAATGAGAAGGAACTaGAGCTACTGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: ERPADTPSASPATKTLDRQMRRN*SYWYLR
Trigger: CCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTG...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTATTCCACCAGTACTaGCTGCTTGACCAAACACAG +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVLFHQY*LLDQTQ
Trigger: CTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAG...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCAAACACGCTACCACTaGAAGAGGATGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVQTRYH*KRMIAG
Trigger: GCCAGCAATCATCCTCTTCCAGTGGTAGCGTGTTTG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCAAACACGCTACCACTaGAAGAGGATGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVQTRYH*KRMIAG
Trigger: GCCAGCAATCATCCTCTTCCAGTGGTAGCGTGTTTG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTGGCTGCATCCTGACTaGGTTTTCCTCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGWLHPD*VFLQGH
Trigger: GTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCTCCAAACGACGAGCTaGCAAATCCACCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKALQTTS*QIHQMS
Trigger: AGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGAAAACCCAAAGCCTTaGGATGCCACACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERENPKP*DATLPP
Trigger: AGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTGCGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLRILLR*QLQCPL
Trigger: GAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCG...CAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528406.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGTVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGAAACCAGAAGTCTGTTaGGACAGTGATCCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGKPEVC*DSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCAGCCACCAAAACCCTaGACAGACGAGTTATTTGAC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAQPPKP*TDELFD
Trigger: GTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCGCAGAGTGCGTCCTTaGATGGTCCTGATACACAAT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVRRVRP*MVLIHN
Trigger: ATTGTGTATCAGGACCATCCAAGGACGCACTCTGCG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATCGCAGAGTGCGTCCTTaGATGGTCCTGATACACAAT +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDRRVRP*MVLIHN
Trigger: ATTGTGTATCAGGACCATCCAAGGACGCACTCTGCG...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAAACTCAACTGCTGCTaGCATGAGTGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVKLNCC*HEWLPL
Trigger: CAGAGGAAGCCACTCATGCCAGCAGCAGTTGAGTTT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGCAGCTCAAGGCCAGGTaGTGGATTGGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVQLKAR*WIGNFI
Trigger: TATGAAATTCCCAATCCATCACCTGGCCTTGAGCTG...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTCTGACAGGATGATCTaGCTCATAAAACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPASDRMI*LIKRRT
Trigger: TGTCCTCCGTTTTATGAGTCAGATCATCCTGTCAGA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTCTGACAGGATGATCTaGCTCATAAAACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASDRMI*LIKRRT
Trigger: TGTCCTCCGTTTTATGAGTCAGATCATCCTGTCAGA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAGCCATTACAGGATCTaGATCTTTCCACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASHYRI*IFPLMS
Trigger: GGACATCAGTGGAAAGATTCAGATCCTGTAATGGCT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGGTATGCAAGTCATCTaGTTCTGTTCGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAGMQVI*FCSQHL
Trigger: AAGATGCTGCGAACAGAATCAGATGACTTGCATACC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTACTTATATCTCCATaGAGCGACTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVLLISP*SDSVVS
Trigger: AGAGACCACAGAGTCGCTTCATGGAGATATAAGTAG...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCAGATGACGTTGAGCTaGCTTCATCCAAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAQMTLS*LHPSLH
Trigger: ATGAAGACTTGGATGAAGTCAGCTCAACGTCATCTG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGTGCTATCGGCCCCTTaGGGAATAATTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEVLSAP*GIILLA
Trigger: TGCTAGCAAAATTATTCCTCAAGGGGCCGATAGCAC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTGCACATTTACCACTTaGGGGACATTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTCTFTT*GTFFNV
Trigger: AACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCATCACCAGATGATAACTaGCCGGATGCTGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPSPDDN*PDAGVG
Trigger: GCCTACACCAGCATCCGGTCAGTTATCATCTGGTGA...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAGAAGCAGATGGGGTTaGAGTCACAGCTGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKARSRWG*SHSCFY
Trigger: ATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAGAAGCAGATGGGGTTaGAGTCACAGCTGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRRSRWG*SHSCFY
Trigger: ATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGATGAGAAAGGCTTGCTaGACTGCCCAGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMMRKAC*TAQKQM
Trigger: CATCTGCTTCTGGGCAGTTCAGCAAGCCTTTCTCAT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGGAGGGGGTAGTTGCTaGACTCAGGAGGCTACCAAA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFGGGSC*TQEATK
Trigger: TTTGGTAGCCTCCTGAGTTCAGCAACTACCCCCTCC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGAGGGGGTAGTTGCTaGACTCAGGAGGCTACCAAA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGGGSC*TQEATK
Trigger: TTTGGTAGCCTCCTGAGTTCAGCAACTACCCCCTCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAGGCTATGGGGGTACTTaGTGTTTCGACGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRGYGGT*CFDGHR
Trigger: CCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCC...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATCTGAGCAAAGACGGATaGGCCAGAAGTGACGGTACC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHLSKDG*ARSDGT
Trigger: GGTACCGTCACTTCTGGCTCATCCGTCTTTGCTCAG...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCTGAGCAAAGACGGATaGGCCAGAAGTGACGGTACC +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFLSKDG*ARSDGT
Trigger: GGTACCGTCACTTCTGGCTCATCCGTCTTTGCTCAG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGGAGCTACTGGTACTTaGGGCGGCACCAAAGACACT +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFGATGT*GGTKDT
Trigger: AGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTGTTGTGGTGGCAGCTaGGGTACCACCAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKCCGGS*GTTKDR
Trigger: TCTGTCTTTGGTGGTACCTCAGCTGCCACCACAACA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCACTAGACCCAAAACCTaGAGCTTGGCAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGITRPKT*SLAKAE
Trigger: TTCAGCTTTTGCCAAGCTTCAGGTTTTGGGTCTAGT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTTCCTCCAAGGCCACTaGAGAAACCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFFLQGH*RNLPLF
Trigger: GAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGFLLQS*KCQWVS
Trigger: AGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTGTAAAGGCTGGGGCTaGACCGAATGCTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLCKGWG*TECWHP
Trigger: GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTGAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...CAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528406.1
CDS-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGACAGACGAGTTATTTaGCCCAAAGCTGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMDRRVI*PKAEPS
Trigger: GGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLDRKAC*HALSFA
Trigger: GGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGCGCTAGGTCCAAGTaGGACCACGGCACATTCGAT +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSGARSK*DHGTFD
Trigger: ATCGAATGTGCCGTGGTCTCACTTGGACCTAGCGCC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAACTCCCCGCTGCTCATaGCCCAAGCCAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRTPRCS*PKPKHC
Trigger: ACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGT...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCGCAAAGGTCTTAAATaGTGCTGGCTTTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKRKGLK*CWLSAP
Trigger: CGGGGCTGAAAGCCAGCATCATTTAAGACCTTTGCG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451030.5
CDS-3UTR TCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTACCTCCTTCTCATGTaGGGCGTACATGATACCAAC +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERYLLLM*GVHDTN
Trigger: GTTGGTATCATGTACGCCTCACATGAGAAGGAGGTA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTACTGTTTCCGTGACTTaGAGGACAGCAATACTACCA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPATVSVT*RTAILP
Trigger: TGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTTTCCCACTGCCAGCTaGTTTCCTTTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFFPTAS*FPLGLQ
Trigger: CTGGAGCCCCAAAGGAAAGCAGCTGGCAGTGGGAAA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCTCATCTCCTCAGAAGTaGCCACTTGGAAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETSSPQK*PLGNRL
Trigger: AAGCCTGTTTCCAAGTGGGCACTTCTGAGGAGATGA...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTGTCAAAACTGTGAATaGTGCTCTGGGAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPACQNCE*CSGKEQ
Trigger: CTGTTCCTTCCCAGAGCAGCATTCACAGTTTTGACA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCTTTACAGGACGTCCGTaGATCTTCACTCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETFTGRP*IFTLQR
Trigger: TCTCTGGAGAGTGAAGATGCACGGACGTCCTGTAAA...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAGGGGCCTGAACCACTaGCTCGTCATCTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGRGLNH*LVIFTG
Trigger: TCCTGTAAAGATGACGAGGCAGTGGTTCAGGCCCCT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGAGGGGCCTGAACCACTaGCTCGTCATCTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKRGLNH*LVIFTG
Trigger: TCCTGTAAAGATGACGAGGCAGTGGTTCAGGCCCCT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCAGATTTAGCAAAAGGTaGTGCATGGGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVRFSKR*CMGQET
Trigger: AGTCTCTTGCCCCATGCAGCACCTTTTGCTAAATCT...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAGATTTAGCAAAAGGTaGTGCATGGGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPARFSKR*CMGQET
Trigger: AGTCTCTTGCCCCATGCAGCACCTTTTGCTAAATCT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTCGTGGCAAGCATTGTaGTATCGGCCCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKSWQAL*YRPLEE
Trigger: TTCCTCAAGGGGCCGATAGCACAATGCTTGCCACGA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAGTGTTTACAGCTGGTaGCTGACTGGCCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSVYSW*LTGHLP
Trigger: CGGCAGATGGCCAGTCAGGCACCAGCTGTAAACACT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGTTTATTAGAGACCCCTaGTTGGCTTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEFIRDP*LAWLAA
Trigger: GGCTGCTAACCAAGCCAAGCAGGGGTCTCTAATAAA...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTTTATTAGAGACCCCTaGTTGGCTTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVFIRDP*LAWLAA
Trigger: GGCTGCTAACCAAGCCAAGCAGGGGTCTCTAATAAA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATAAAGGCTTGCTGAACTaGCCAGAAGCAGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDKGLLN*PEADGV
Trigger: AACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGGTGTTGCCCCTTGTaGAGCAGTGAAATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVGCCPL*SSEIRR
Trigger: TCTTCTAATTTCACTGCTGCACAAGGGGCAACACCC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTTTTGTAGAATCATCTaGTTGGCCAACCCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVFCRII*LANPQS
Trigger: GGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGACTAGTACTAGATGCTaGAGTGCCAGAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERTSTRC*SARVAD
Trigger: GTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCACTAGTACTAGATGCTaGAGTGCCAGAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVTSTRC*SARVAD
Trigger: GTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGT...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCAAGACTAGTACTAGATaGTGCAGTGCCAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVKTSTR*CSARVA
Trigger: AGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTT...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCAGCCTCTGCAGAAAGTaGTACAAGACTAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPSLCRK*YKTSTR
Trigger: TCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCAACAATGGACGTGGTaGTGGAGGCTATGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQQQWTW*WRLWGY
Trigger: GTACCCCCATAGCCTCCAGCACCACGTCCATTGTTG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGAAATGCTGCTGCCTCTaGAGATGGGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSKCCCL*RWAGSN
Trigger: GTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCATTT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGACGGTACCAAATGCTaGTGCCTCTGCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSDGTKC*CLCRWA
Trigger: GGCCCATCTGCAGAGGCAGCAGCATTTGGTACCGTC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTGGTGCGGTGCTGGCTaGCACTTGCCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLWCGAG*HLPKHG
Trigger: CCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATCCAAAGACTGAGGCCTaGCCGAAGGTTGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHPKTEA*PKVVCP
Trigger: TGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGG...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGAAGGAAAAGACACTTaGAGCACTGCTCGCCGACTG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKEGKDT*STARRL
Trigger: CAGTCGGCGAGCAGTGCTGCAAGTGTCTTTTCCTTC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATTCCACCAGTACTGGCTaGTTGACCAAACACAGAACC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDSTSTG*LTKHRT
Trigger: GGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGA...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTCCACCAGTACTGGCTaGTTGACCAAACACAGAACC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMSTSTG*LTKHRT
Trigger: GGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCTGGAAGAGGATGATTaGTGGCCAAAGACTATTCCA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKALEEDD*WPKTIP
Trigger: TGGAATAGTCTTTGGCCAGCAATCATCCTCTTCCAG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTGGGTTTTTGTTGGCTaGATCCTGACTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVWVFVG*ILTGFS
Trigger: GGAAAACCCAGTCAGGATGCAGCCAACAAAAACCCA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CCACCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTGAAAAGCCTCTCCGAACACTTTaGCTCCCGTCGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PPKPWTDELFDPKLNPEKPLRTL*LPSSPE
Trigger: CTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGG...CTTTTCAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLSCAGS*SALSEH
Trigger: GTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTGAAACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLKPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTT...CAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528406.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAGGATGTGGTGTTGCTaGTGCTCCCAAACCCGAATC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGRMWCC*CSQTRI
Trigger: GATTCGGGTTTGGGAGCAGCAGCAACACCACATCCT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQRRMWC*CCSQTR
Trigger: TCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHRRMWC*CCSQTR
Trigger: TCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCG...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSSDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATCTTCTGAAACTCAACTaGTGCTGGCATGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDLLKLN*CWHEWL
Trigger: AAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAG...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCTTCTGAAACTCAACTaGTGCTGGCATGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERLLKLN*CWHEWL
Trigger: AAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGAGGATGTGGTGTTGCTaGTGCTCCCAAACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTRMWCC*CSQTFN
Trigger: ATTAAAAGTTTGGGAGCAGCAGCAACACCACATCCT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR GCA 90 bp AATAAGAGTGAAGTTAAAGCACGCATCCACTCGAAAGACAAAGGTGGTCCCCATGTGGGAAGCCCTCCGTaGCTCCACCACCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: NKSEVKARIHSKDKGGPHVGSPP*LHHLLC
Trigger: GCACAGGAGGTGGTGGAGGCACGGAGGGCTTCCCAC...ATGGGGACCACCTTTGTCTTTCGAGTGGATGCGTGCTTTAACTTCACTCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAGGTTACTGCTACCGTaGAAGGAAGAGTTGCACATA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDARLLLP*KEELHI
Trigger: TATGTGCAACTCTTCCTTCCACGGTAGCAGTAACCT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACCAGCTGCTTTCCTTTaGGGCTCCAGCACACAGAGG +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRPAAFL*GSSTQR
Trigger: CCTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGG...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCAGCAGCATACACTATaGCGAAGACGTAGGTACCAA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVQQHTL*RRRRYQ
Trigger: TTGGTACCTACGTCTTCGCCATAGTGTATGCTGCTG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTACTTCCTGGTGACTTaGGCTGTCGCTCTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGYFLVT*AVALLL
Trigger: TAGAAGGAGAGCGACAGCCCAAGTCACCAGGAAGTA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAAGAAAAAGTGGCAATaGGAGCAGCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAKKKWQ*EQQVMK
Trigger: CTTCATCACCTGCTGCTCCCATTGCCACTTTTTCTT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGAAGCAAAGAAAAAGTaGCAATGGGAGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEEAKKK*QWEQQV
Trigger: CACCTGCTGCTCCCATTGCCACTTTTTCTTTGCTTC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGAGCTGTCGGAGCCACTaGAATATGAAGGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSSCRSH*NMKGAP
Trigger: GGGAGCCCCCTTCATATTCCAGTGGCTCCGACAGCT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCTTCATTGCTATATTTaGAGCAGACACACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGLHCYI*SRHTWH
Trigger: GTGCCAAGTGTGTCTGCTCCAAATATAGCAATGAAG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCTTGGAAACAGGCTTTaGAAGTTCGGGCTTTTAACT +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPLGNRL*KFGLLT
Trigger: AGTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCAGTGTCTCTCGCTCTaGCACAAGCAGGTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFQCLSL*HKQVPL
Trigger: CAAAGGCACCTGCTTGTGCCAGAGCGAGAGACACTG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCTTTGGGCAAGGATTTaGTGTGAGATTCTATGGTGG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPALWARI*CEILWW
Trigger: CCACCATAGAATCTCACACCAAATCCTTGCCCAAAG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGTTTGGCTGGTACTTTaGGCAAGGATTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERVWLVL*ARIWCE
Trigger: CTCACACCAAATCCTTGCCCAAAGTACCAGCCAAAC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGAGAGACTGGGCTGGATaGAAGGAGTGCGAACCACGG +
Preference number: 4 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKRDWAG*KECEPR
Trigger: CCGTGGTTCGCACTCCTTCCATCCAGCCCAGTCTCT...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CCA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCAAAAGGTGCTGCATaGGGCAAGAGACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PEADGVEVTAVSILAVPEAKGAA*GKRLGW
Trigger: CCAGCCCAGTCTCTTGCCCCATGCAGCACCTTTTGC...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACCTGGGTGAGGTGTTTTaGCTGTGGAGTAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHLGEVF*LWSRAL
Trigger: CAGTGCCCTACTCCACAGCCAAAACACCTCACCCAG...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTTGGTTAGCAGCCACTaGGGTCAACACTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFLVSSH*GQHWVR
Trigger: CCTCACCCAGTGTTGACCCCAGTGGCTGCTAACCAA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTCCCAGCTTGGACGGTaGGGTTTCCAGCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGSQLGR*GFQLTR
Trigger: TCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATTCCAGCCAAAGAACTTaGAAACAGAAGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDSSQRT*KQKLSQ
Trigger: CTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGGA...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTCCAGCCAAAGAACTTaGAAACAGAAGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVSSQRT*KQKLSQ
Trigger: CTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGGA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTAGAATCATCTGCTTaGCCAACCCGCAGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDVESSA*PTRSPE
Trigger: TTCAGGACTGCGGGTTGGCCAAGCAGATGATTCTAC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTCCTGCACTGGTGACTaGCAGACTGCCAAAAACGGC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSCTGD*QTAKNG
Trigger: GCCGTTTTTGGCAGTCTGCCAGTCACCAGTGCAGGA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCCTGCACTGGTGACTaGCAGACTGCCAAAAACGGC +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFSCTGD*QTAKNG
Trigger: GCCGTTTTTGGCAGTCTGCCAGTCACCAGTGCAGGA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTCCTGCACTGGTGACTaGCAGACTGCCAAAAACGGC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQSCTGD*QTAKNG
Trigger: GCCGTTTTTGGCAGTCTGCCAGTCACCAGTGCAGGA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGGGCACTGTGCTATTaGTCTGTTGGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDGALCY*SVGFQM
Trigger: CATTTGGAAGCCAACAGACCAATAGCACAGTGCCCC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCAGTGGCAGCTGTAGTTaGTGGTGGGGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLSGSCS*WWGRWG
Trigger: CCCCCATCTGCCCCACCACCAACTACAGCTGCCACT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGTTGCTGACTGCAGGCTaGGCAAGAACAGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERLLTAG*ARTGSF
Trigger: AAAAGAACCTGTTCTTGCCCAGCCTGCAGTCAGCAA...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGACCCCCGTGGTGGCTaGGGTAGCCTCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETDPRGG*GSLCRK
Trigger: CTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATTGGTGCTGGAGGCTATaGGGGTACTTGATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDWCWRL*GYLMFR
Trigger: TCGAAACATCAAGTACCCCCATAGCCTCCAGCACCA...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGAGCAACAATGGACGTaGTGCTGGAGGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSEQQWT*CWRLWG
Trigger: CCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGTGTTGTTGGTGAGCTaGTTGAAAGCTGAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAVLLVS*LKAELE
Trigger: TTCTAGCTCAGCTTTCAACCAGCTCACCAACAACAC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGTGTTGTTGGTGAGCTaGTTGAAAGCTGAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIVLLVS*LKAELE
Trigger: TTCTAGCTCAGCTTTCAACCAGCTCACCAACAACAC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSDLVRC*LPLAQT
Trigger: TGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCTGCCCAAACAGACTTaGTGCGGTGCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLLPKQT*CGAGCH
Trigger: GTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCAAAGACACTTCCACTaGTGGATGTGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKQRHFH*WMWEWR
Trigger: CCTCCACTCCCACATCCACCAGTGGAAGTGTCTTTG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCAAAGACACTTCCACTaGTGGATGTGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGQRHFH*WMWEWR
Trigger: CCTCCACTCCCACATCCACCAGTGGAAGTGTCTTTG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCTATTCCACCAGTACTaGCTGCTTGACCAAACACAG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVLFHQY*LLDQTQ
Trigger: CTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGAAGAGGATGATTGCTaGCCAAAGACTATTCCACCA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACEEDDC*PKTIPP
Trigger: TGGTGGAATAGTCTTTGGCCAGCAATCATCCTCTTC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCAAACACGCTACCACTaGAAGAGGATGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDQTRYH*KRMIAG
Trigger: GCCAGCAATCATCCTCTTCCAGTGGTAGCGTGTTTG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCTCCAAACGACGAGCTaGCAAATCCACCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAELQTTS*QIHQMS
Trigger: AGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGAAAACCCAAAGCCTTaGGATGCCACACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDENPKP*DATLPP
Trigger: AGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAAACCAGAAGTCTGTTaGGACAGTGATCCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAKPEVC*DSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAAACCAGAAGTCTGTTaGGACAGTGATCCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAKPEVC*DSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAACCTCTTCCCTATGTaGAGGGCGCTAGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPNLFPM*RALGPS
Trigger: ACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTT...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCTCTGCTAGTGTTGTCTaGCAACAGCAGTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETSASVV*QQQCLS
Trigger: AGACAGACACTGCTGTTGCCAGACAACACTAGCAGA...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCAGCTGTTTCTATCTTaGCTGTCCCTGGCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEQLFLS*LSLASE
Trigger: TTCACTTGCCAGGGACAGCCAAGATAGAAACAGCTG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTGCACGCAGAGAGTGTaGGGTTATCACAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHCTQRV*GYHSSR
Trigger: CCTTGAGCTGTGATAACCTCACACTCTCTGCGTGCA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGCTTTCACTGTTTCCGTaGCTTGCAGGACAGCAATAC +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWLSLFP*LAGQQY
Trigger: GTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAG...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGATTCCTCAATGTAACTaGGGTAGTAATGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: GKKLRMRLVPGIERPADTIPQCN*GSNDAV
Trigger: GACAGCATCATTACTACCTCAGTTACATTGAGGAAT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCTGTTGAAAGTAACATaGGAACTGGAGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVLLKVT*ELEQEE
Trigger: TTCCTCCTGCTCCAGTTCTCATGTTACTTTCAACAG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATCTGTTGAAAGTAACATaGGAACTGGAGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDLLKVT*ELEQEE
Trigger: TTCCTCCTGCTCCAGTTCTCATGTTACTTTCAACAG...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGGGCTTGAACTGCCCTaGGCAGATCGTCCTGATGGT +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLGLELP*ADRPDG
Trigger: ACCATCAGGACGATCTGCTCAGGGCAGTTCAAGCCC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAGCCATTACAGGATCTaGATCTTTCCACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVSHYRI*IFPLMS
Trigger: GGACATCAGTGGAAAGATTCAGATCCTGTAATGGCT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGGTATGCAAGTCATCTaGTTCTGTTCGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERGMQVI*FCSQHL
Trigger: AAGATGCTGCGAACAGAATCAGATGACTTGCATACC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATTTTTGTTCCAGATGCTaGTCCCACTCCAAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDFCSRC*SHSKSR
Trigger: TCTAGACTTGGAGTGGGATCAGCATCTGGAACAAAA...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTTTTGTTCCAGATGCTaGTCCCACTCCAAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVFCSRC*SHSKSR
Trigger: TCTAGACTTGGAGTGGGATCAGCATCTGGAACAAAA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCGGCAAGGATTTGGTGTaGGATTCTATGGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETGKDLV*DSMVVF
Trigger: GAAAACCACCATAGAATCTCACACCAAATCCTTGCC...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TCTTGGCTGTCCCTGAAGCTTTGTCACCAGATGATAACTGACCGGATGCTGGTGTCACCAGATGATAACTaGCCGGATGCTGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SWLSLKLCHQMITDRMLVSPDDN*PDAGVG
Trigger: GCCTACACCAGCATCCGGTCAGTTATCATCTGGTGA...CACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGGACAGCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATAGAAGCAGATGGGGTTaGAGTCACAGCTGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDRSRWG*SHSCFY
Trigger: ATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCT...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTGCCAGAGTTGCTaGCTGCAGGCTGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLQCQSC*LQAGQE
Trigger: TTCTTGCCCAGCCTGCAGTCAGCAACTCTGGCACTG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCGGATGAGCCAGAAGTaGCGGTACCAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSRMSQK*RYQMLL
Trigger: CAGCAGCATTTGGTACCGTCACTTCTGGCTCATCCG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTGTTGTGGTGGCAGCTaGGGTACCACCAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQCCGGS*GTTKDR
Trigger: TCTGTCTTTGGTGGTACCTCAGCTGCCACCACAACA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTGTTGTGGTGGCAGCTaGGGTACCACCAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFCCGGS*GTTKDR
Trigger: TCTGTCTTTGGTGGTACCTCAGCTGCCACCACAACA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTGTTGTGGTGGCAGCTaGGGTACCACCAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHCCGGS*GTTKDR
Trigger: TCTGTCTTTGGTGGTACCTCAGCTGCCACCACAACA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFFLLQS*KCQWVS
Trigger: AGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTGTAAAGGCTGGGGCTaGACCGAATGCTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLCKGWG*TECWHP
Trigger: GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQSLLGQ*SESGGI
Trigger: AATGCCCCCACTTTCGGATCACTGTCCCAACAGACT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFSLLGQ*SESGGI
Trigger: AATGCCCCCACTTTCGGATCACTGTCCCAACAGACT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGACAGACGAGTTATTTaGCCCAAAGCTGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKDRRVI*PKAEPS
Trigger: GGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTGTCCTTGGATGGTCCTaGTACACAATGGCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTVLGWS*YTMAKR
Trigger: TCTTTTAGCCATTGTGTATCAGGACCATCCAAGGAC...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGAGACGGTCCTTGTTTaGTGGCAACTATCTAGGATG +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWETVLV*WQLSRM
Trigger: CATCCTAGATAGTTGCCATCAAACAAGGACCGTCTC...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTTAGTAGGAAAAATCTaGAAGCCACTGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVLVGKI*KPLAPP
Trigger: TGGTGGAGCCAGTGGCTTGCAGATTTTTCCTACTAA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGACTGTTTCCGTGACTTaGAGGACAGCAATACTACCA +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVTVSVT*RTAILP
Trigger: TGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGT...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGCACACAGAGGTTACTaGTACCGTGGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGAHRGY*YRGRKS
Trigger: ACTCTTCCTTCCACGGTAGCAGTAACCTCTGTGTGC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTTCCAGGGTCCCATCTaGAGCAGCATACACTATGGC +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHFQGPI*SSIHYG
Trigger: GCCATAGTGTATGCTGCTGCAGATGGGACCCTGGAA...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTTCCAGGGTCCCATCTaGAGCAGCATACACTATGGC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQFQGPI*SSIHYG
Trigger: GCCATAGTGTATGCTGCTGCAGATGGGACCCTGGAA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAGATGCTGTCTCTCCGTaGAGCTGCCATAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRDAVSP*SCHNRA
Trigger: AGCCCTGTTATGGCAGCTGCACGGAGAGACAGCATC...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGAAGGAGGGCTTCATTaGTATATTTGGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVEGGLH*YIWSRH
Trigger: GTGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCAGGAGTAGAGGTAGCTaGAGCAGTAAACTTTTCACT +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIRSRGS*SSKLFT
Trigger: AGTGAAAAGTTTACTGCTGCAGCTACCTCTACTCCT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000451030.5
CDS-3UTR GCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAATGGCGACATCGGGGGTaGGCTCTGGGAGCTACTAAC +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEWRHRG*ALGATN
Trigger: GTTAGTAGCTCCCAGAGCGCACCCCCGATGTCGCCA...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359428.10
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGCACTGGGCTTGAACTaGCCTGAGCAGATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLALGLN*PEQIVL
Trigger: CAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTGTCAAAACTGTGAATaGTGCTCTGGGAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVCQNCE*CSGKEQ
Trigger: CTGTTCCTTCCCAGAGCAGCATTCACAGTTTTGACA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGAAGTTTCTCAGTTGTaGCTGTTTCATGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGEVSQL*LFHGGQ
Trigger: CTGTCCCCCATGAAACAGGCACAACTGAGAAACTTC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTTTACAGGACGTCCGTaGATCTTCACTCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGFTGRP*IFTLQR
Trigger: TCTCTGGAGAGTGAAGATGCACGGACGTCCTGTAAA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAGATTTAGCAAAAGGTaGTGCATGGGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERRFSKR*CMGQET
Trigger: AGTCTCTTGCCCCATGCAGCACCTTTTGCTAAATCT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGTGGGAAGGACTAGGTaGACCATGTTTCACGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWVGRTR*TMFHGF
Trigger: AAAACCGTGAAACATGGTGCACCTAGTCCTTCCCAC...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGTGGGAAGGACTAGGTaGACCATGTTTCACGGTTTT +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMVGRTR*TMFHGF
Trigger: AAAACCGTGAAACATGGTGCACCTAGTCCTTCCCAC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGAGTGTTTACAGCTGGTaGCTGACTGGCCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKSVYSW*LTGHLP
Trigger: CGGCAGATGGCCAGTCAGGCACCAGCTGTAAACACT...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGGTGTTGCCCCTTGTaGAGCAGTGAAATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDGCCPL*SSEIRR
Trigger: TCTTCTAATTTCACTGCTGCACAAGGGGCAACACCC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTTTAGTGGAGGGTGTTaGCCCTTGTGCAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKFSGGC*PLCSSE
Trigger: TTCACTGCTGCACAAGGGGCAACACCCTCCACTAAA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACAGCAGTTCCAGAAGGTaGCACAGGTCTGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHSSSRR*HRSAAR
Trigger: TCTAGCAGCAGACCTGTGGCACCTTCTGGAACTGCT...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAGCAGTTCCAGAAGGTaGCACAGGTCTGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSSSRR*HRSAAR
Trigger: TCTAGCAGCAGACCTGTGGCACCTTCTGGAACTGCT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTTTTGTAGAATCATCTaGTTGGCCAACCCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMFCRII*LANPQS
Trigger: GGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAAGACTAGTACTAGATaGTGCAGTGCCAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVKTSTR*CSARVA
Trigger: AGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAGCCTCTGCAGAAAGTaGTACAAGACTAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDASLCRK*YKTSTR
Trigger: TCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAGCCTCTGCAGAAAGTaGTACAAGACTAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASLCRK*YKTSTR
Trigger: TCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAGCCTCTGCAGAAAGTaGTACAAGACTAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPASLCRK*YKTSTR
Trigger: TCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAGCCTCTGCAGAAAGTaGTACAAGACTAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACSLCRK*YKTSTR
Trigger: TCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAGGAAGCAGGTGGTACTaGCTCCGTCCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEGSRWY*LRPGIR
Trigger: CCTGATGCCAGGACGGAGGCAGTACCACCTGCTTCC...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGGTACCAAATGCTGCTaGCTCTGCAGATGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLGTKCC*LCRWAG
Trigger: CCCGGCCCATCTGCAGAGGCAGCAGCATTTGGTACC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTCCACCAGTACTGGCTaGTTGACCAAACACAGAACC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGSTSTG*LTKHRT
Trigger: GGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTCTGGAAGAGGATGATTaGTGGCCAAAGACTATTCCA +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTLEEDD*WPKTIP
Trigger: TGGAATAGTCTTTGGCCAGCAATCATCCTCTTCCAG...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCTGGAAGAGGATGATTaGTGGCCAAAGACTATTCCA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAELEEDD*WPKTIP
Trigger: TGGAATAGTCTTTGGCCAGCAATCATCCTCTTCCAG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAAAACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEKPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTT...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGAGGATGTGGTGTTGCTaGTGCTCCCAAACCCGAATC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQRMWCC*CSQTRI
Trigger: GATTCGGGTTTGGGAGCAGCAGCAACACCACATCCT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTACCCAAGGGCTATCTaGACTGTGGTTAGTAGACAC +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGYPRAI*TVVSRH
Trigger: GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTCATCAGCAACAGCCTaGCCTTCAGGGTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSSSATA*PSGSET
Trigger: TGTCTCCGACCCTGAAGGGCAGGCTGTTGCTGATGA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR GCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGCAAGTCACACTACTTaGCCAGACATGCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERASHTT*PDMHKA
Trigger: TGCTTTATGCATGTCTGGGCAAGTAGTGTGACTTGC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCCCGCTCGGGAATCATaGCATCCATCTCGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLPARES*HPSRLP
Trigger: TGGGAGACGAGATGGATGCCATGATTCCCGAGCGGG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGACTCGAGCGTTCCTTaGGCAATTCCTCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSDSSVP*AIPQGS
Trigger: ACTCCCCTGAGGAATTGCCCAAGGAACGCTCGAGTC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCACCATGGAGGGGACAGTaGGGTTCCACTTCATATCAA +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPPWRGQ*GSTSYQ
Trigger: TTGATATGAAGTGGAACCCCACTGTCCCCTCCATGG...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGACAAACTGCCACCATaGAGGGGACAGTGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLDKLPP*RGQWGS
Trigger: GGAACCCCACTGTCCCCTCCATGGTGGCAGTTTGTC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGAAGAAAAAGTGGCAATaGGAGCAGCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEKKKWQ*EQQVMK
Trigger: CTTCATCACCTGCTGCTCCCATTGCCACTTTTTCTT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGAAGCAAAGAAAAAGTaGCAATGGGAGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWEAKKK*QWEQQV
Trigger: CACCTGCTGCTCCCATTGCCACTTTTTCTTTGCTTC...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCAGCTGTCGGAGCCACTaGAATATGAAGGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLSCRSH*NMKGAP
Trigger: GGGAGCCCCCTTCATATTCCAGTGGCTCCGACAGCT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAGACACACTTGGCACTaGTGTGCTTTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHRHTWH*CAFQGR
Trigger: CCTACCCTGGAAAGCACACCAGTGCCAAGTGTGTCT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTGGAGCAGACACACTTaGCACTGGTGTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFWSRHT*HWCAFQ
Trigger: CTGGAAAGCACACCAGTGCCAAGTGTGTCTGCTCCA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTTGGTCCAGAAGCAGCTaGCTTGGAGGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTWSRSS*LGGRRE
Trigger: TTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGGACCA...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTGGTCCAGAAGCAGCTaGCTTGGAGGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQWSRSS*LGGRRE
Trigger: TTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGGACCA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTGGTCCAGAAGCAGCTaGCTTGGAGGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFWSRSS*LGGRRE
Trigger: TTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGGACCA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCTGGAGGGGTTATCCTaGGTGATTTCTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMLEGLS*VISVPL
Trigger: CAATGGTACAGAAATCACCCAGGATAACCCCTCCAG...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCTTGGAAACAGGCTTTaGAAGTTCGGGCTTTTAACT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKALGNRL*KFGLLT
Trigger: AGTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCTTGGAAACAGGCTTTaGAAGTTCGGGCTTTTAACT +
Preference number: 4 (lower is better)
Translates to: FSGKKLRMRLVPGIERPALGNRL*KFGLLT
Trigger: AGTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGCTGAGCTTCACTCTTaGGATCCAGTGGTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERAELHS*DPVVFY
Trigger: ATAAAAGACCACTGGATCCCAAGAGTGAAGCTCAGC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCTTTGGGCAAGGATTTaGTGTGAGATTCTATGGTGG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVLWARI*CEILWW
Trigger: CCACCATAGAATCTCACACCAAATCCTTGCCCAAAG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAGTGGATCTCACTGGTaGGGTCTTCCTCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSGSHW*GLPLGQ
Trigger: TTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCAGAGACTGGGCTGGATaGAAGGAGTGCGAACCACGG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLRDWAG*KECEPR
Trigger: CCGTGGTTCGCACTCCTTCCATCCAGCCCAGTCTCT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTTTCACGGTTTTCGTaGCAAGCATTGTGCTATCGG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDVSRFS*QALCYR
Trigger: CCGATAGCACAATGCTTGCCACGAAAACCGTGAAAC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCACAAAGTGTTTACAGCTaGTGCCTGACTGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPQSVYS*CLTGHL
Trigger: CAGATGGCCAGTCAGGCACCAGCTGTAAACACTTTG...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGACCCCTGCTTGGCTTaGTTAGCAGCCACTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLDPCLA*LAATGV
Trigger: GACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACGAGAATGCGTCCGGCTaGCTTGACTCTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHENASG*LDSLVE
Trigger: CTCCACTAAAGAGTCAAGCCAGCCGGACGCATTCTC...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGACGTCTTGGTTGGCTaGGTACTAGTTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGDVLVG*VLVRLV
Trigger: CACAAGCCTAACTAGTACCCAGCCAACCAAGACGTC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTCAGTTGAGGAAGTGCTaGTGGCTGCTGGTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTQLRKC*WLLVVL
Trigger: TAGCACCACCAGCAGCCACCAGCACTTCCTCAACTG...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTACCAAATGACAATGTaGGGAATGATGTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRYQMTM*GMMLEG
Trigger: CCCTTCCAACATCATTCCCCACATTGTCATTTGGTA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGGAGCCTGGGGAAGCTaGGCTGACTGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLGAWGS*ADCCSS
Trigger: AGAGGAGCAACAGTCAGCCCAGCTTCCCCAGGCTCC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATTTGCTGACTGCAGGCTaGGCAAGAACAGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLLTAG*ARTGSF
Trigger: AAAAGAACCTGTTCTTGCCCAGCCTGCAGTCAGCAA...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTGGTGCTGGAGGCTATaGGGGTACTTGATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKWCWRL*GYLMFR
Trigger: TCGAAACATCAAGTACCCCCATAGCCTCCAGCACCA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCAATGGACGTGGTGCTaGAGGCTATGGGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSQWTWC*RLWGYL
Trigger: CAAGTACCCCCATAGCCTCCAGCACCACGTCCATTG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGAGCAACAATGGACGTaGTGCTGGAGGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLEQQWT*CWRLWG
Trigger: CCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGGCCGGGAGCAACAATaGACGTGGTGCTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLGREQQ*TWCWRL
Trigger: TAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGTGTTGTTGGTGAGCTaGTTGAAAGCTGAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEVLLVS*LKAELE
Trigger: TTCTAGCTCAGCTTTCAACCAGCTCACCAACAACAC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLDLVRC*LPLAQT
Trigger: TGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCTGTCCAAAGACCCCTaGGGCTGTGGTACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSLSKDP*GCGTKS
Trigger: GCTTTTGGTACCACAGCCCCAGGGGTCTTTGGACAG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCAGACACTTCCACTGGTaGATGTGGGAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFRHFHW*MWEWRK
Trigger: CTTCCTCCACTCCCACATCCACCAGTGGAAGTGTCT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCAGGAACTGGAGCTACTaGTACTTGAGGCGGCACCAA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFRNWSY*YLRRHQ
Trigger: TTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCAAATGAGAAGGAACTaGAGCTACTGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVQMRRN*SYWYLR
Trigger: CCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCAAATGAGAAGGAACTaGAGCTACTGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEQMRRN*SYWYLR
Trigger: CCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCAAATGAGAAGGAACTaGAGCTACTGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERQMRRN*SYWYLR
Trigger: CCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTTGCTGCTGTTGTGGTaGCAGCTGAGGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQLLLLW*QLRYHQ
Trigger: TTGGTGGTACCTCAGCTGCCACCACAACAGCAGCAA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCTATTCCACCAGTACTaGCTGCTTGACCAAACACAG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLFHQY*LLDQTQ
Trigger: CTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGAAGAGGATGATTGCTaGCCAAAGACTATTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVEEDDC*PKTIPP
Trigger: TGGTGGAATAGTCTTTGGCCAGCAATCATCCTCTTC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGAAGAGGATGATTGCTaGCCAAAGACTATTCCACCA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIEREEDDC*PKTIPP
Trigger: TGGTGGAATAGTCTTTGGCCAGCAATCATCCTCTTC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTGGCTGCATCCTGACTaGGTTTTCCTCCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSWLHPD*VFLQGH
Trigger: GTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGACTGGCCGAGCTGAATaGGTTTTTGTTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKTGRAE*VFVGCI
Trigger: GATGCAGCCAACAAAAACCCATTCAGCTCGGCCAGT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCATCCACCAAATGTCTTaGCCCCACTGTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAIHQMS*PHCFQI
Trigger: TATTTGGAAACAGTGGGGCCAAGACATTTGGTGGAT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCTCCAAACGACGAGCTaGCAAATCCACCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMLQTTS*QIHQMS
Trigger: AGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAG...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCTCCAAACGACGAGCTaGCAAATCCACCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLQTTS*QIHQMS
Trigger: AGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCAGCCACCAAAACCCTaGACAGACGAGTTATTTGAC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDQPPKP*TDELFD
Trigger: GTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGGTCCTGATACACAATaGCTAAAAGAACAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAGPDTQ*LKEQGE
Trigger: CTCTCCTTGTTCTTTTAGCCATTGTGTATCAGGACC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGTGTCCTGCCTCACGCTaGCTACTATTGTACTGTACT +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWCPASR*LLLYCT
Trigger: AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACA...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTTCTTTCCATACAAAGGTaGCCAAGGGATCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LTRPQLRQPPKPWTDELFLSIQR*PRDLLS
Trigger: TGAGAGCAGATCCCTTGGCCACCTTTGTATGGAAAG...AAATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR TCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTTTAGCGCTCTAAACTaGAAATCCTTCATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMFSALN*KSFISR
Trigger: GCGGGAGATGAAGGATTTTCAGTTTAGAGCGCTAAA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTGCACGCAGAGAGTGTaGGGTTATCACAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSCTQRV*GYHSSR
Trigger: CCTTGAGCTGTGATAACCTCACACTCTCTGCGTGCA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGCAAGGATTTGGTGTaGGATTCTATGGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDGKDLV*DSMVVF
Trigger: GAAAACCACCATAGAATCTCACACCAAATCCTTGCC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGTCCCATCACACCAGGTaGAGAACCATGAACCAGGTG +
Preference number: 4 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKSHHTR*RTMNQV
Trigger: CACCTGGTTCATGGTTCTTCACCTGGTGTGATGGGA...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTGCACATTTACCACTTaGGGGACATTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVCTFTT*GTFFNV
Trigger: AACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTTGGCTGTCCCTGAAGCTTTGTCACCAGATGATAACTGACCGGATGCTGGTGATGAGAAAGGCTTGCTaGACTGCCCAGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: SWLSLKLCHQMITDRMLVMRKAC*TAQKQM
Trigger: CATCTGCTTCTGGGCAGTTCAGCAAGCCTTTCTCAT...CACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGGACAGCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAACAGTGCCAGAGTTGCTaGCTGCAGGCTGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEQCQSC*LQAGQE
Trigger: TTCTTGCCCAGCCTGCAGTCAGCAACTCTGGCACTG...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGGCTATGGGGGTACTTaGTGTTTCGACGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLGYGGT*CFDGHR
Trigger: CCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCGGATGAGCCAGAAGTaGCGGTACCAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLRMSQK*RYQMLL
Trigger: CAGCAGCATTTGGTACCGTCACTTCTGGCTCATCCG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGACTAGACCCAAAACCTaGAGCTTGGCAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWTRPKT*SLAKAE
Trigger: TTCAGCTTTTGCCAAGCTTCAGGTTTTGGGTCTAGT...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTACTAGACCCAAAACCTaGAGCTTGGCAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGTRPKT*SLAKAE
Trigger: TTCAGCTTTTGCCAAGCTTCAGGTTTTGGGTCTAGT...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CAGCCACCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTCCTCCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTA +
Preference number: 4 (lower is better)
Translates to: QPPKPWTDELFDPKLNPPPVLAA*PNTEPV
Trigger: TACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGG...AGGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFPVLAA*PNTEPV
Trigger: TACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCCCCACTGGCCGAGCTaGATGGGTTTTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLPHWPS*MGFCWL
Trigger: CAGCCAACAAAAACCCATTCAGCTCGGCCAGTGGGG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTATTTGACCCAAAGCTaGACCCTCCTGTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHYLTQS*TLLCLI
Trigger: GATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTATTTGACCCAAAGCTaGACCCTCCTGTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFYLTQS*TLLCLI
Trigger: GATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTTCTTGGCTGTGATCTaGAAAAACCCACATACGTTC +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVFLAVI*KNPHTF
Trigger: GAACGTATGTGGGTTTTTTCAGATCACAGCCAAGAA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGGCGCTAGGTCCAAGTaGGACCACGGCACATTCGAT +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLGARSK*DHGTFD
Trigger: ATCGAATGTGCCGTGGTCTCACTTGGACCTAGCGCC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGACTATTGTACTGTACTaGAAAGCGCTATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVTIVLY*KALWLL
Trigger: AAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGT...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCATGTGAGGCGTACATaGTACCAACTGTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGHVRRT*YQLWFH
Trigger: ATGGAACCACAGTTGGTATCATGTACGCCTCACATG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR GCA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCAATCACCATGCCTCCTaGATCTTTCAAAAGCTTATG +
Preference number: 4 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGINHHAS*IFQKLM
Trigger: CATAAGCTTTTGAAAGATGCAGGAGGCATGGTGATT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAATCACCATGCCTCCTaGATCTTTCAAAAGCTTATG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKANHHAS*IFQKLM
Trigger: CATAAGCTTTTGAAAGATGCAGGAGGCATGGTGATT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCATATCAATCACCATaGCTCCTGCATCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: KKLRMRLVPGIERPADTPSYQSP*LLHLSK
Trigger: TTTTGAAAGATGCAGGAGGCATGGTGATTGATATGA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGAAGGAGGGCTTCATTaGTATATTTGGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMEGGLH*YIWSRH
Trigger: GTGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGCACTGGGCTTGAACTaGCCTGAGCAGATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETALGLN*PEQIVL
Trigger: CAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACCAAAACTGTGAATGCTaGTCTGGGAAGGAACAGCCG +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHQNCEC*SGKEQP
Trigger: CGGCTGTTCCTTCCCAGAGCAGCATTCACAGTTTTG...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTGTCAAAACTGTGAATaGTGCTCTGGGAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGCQNCE*CSGKEQ
Trigger: CTGTTCCTTCCCAGAGCAGCATTCACAGTTTTGACA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp GAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCTTCGTGGCAAGCATTGTaGTATCGGCCCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: EADGVEVTAVSILAVPEASWQAL*YRPLEE
Trigger: TTCCTCAAGGGGCCGATAGCACAATGCTTGCCACGA...AGCTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCATTTATTAGAGACCCCTaGTTGGCTTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPFIRDP*LAWLAA
Trigger: GGCTGCTAACCAAGCCAAGCAGGGGTCTCTAATAAA...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TCTTGGCTGTCCCTGAAGCTTTGTCACCAGATGATAACTGACCGGATGCTGGTGAAAGGCTTGCTGAACTaGCCAGAAGCAGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: SWLSLKLCHQMITDRMLVKGLLN*PEADGV
Trigger: AACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTT...CACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGGACAGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCACCTCATAAGAAGGTTTaGTTCCCCCACCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPPHKKV*FPHQMR
Trigger: TCTCATCTGGTGGGGGAAGCAAACCTTCTTATGAGG...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGACCCCAGAGGATCCTaGACTGGTGACTGGCAGACT +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETDPRGS*TGDWQT
Trigger: AGTCTGCCAGTCACCAGTGCAGGATCCTCTGGGGTC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGACTAGTACTAGATGCTaGAGTGCCAGAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKTSTRC*SARVAD
Trigger: GTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCAGCCTCTGCAGAAAGTaGTACAAGACTAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVSLCRK*YKTSTR
Trigger: TCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCT...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGACAGACTTGGTGCGGTaGTGGCTGCCACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLTDLVR*WLPLAQ
Trigger: TTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTCCCAAACAGACTTGGTaGGGTGCTGGCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETPKQTW*GAGCHL
Trigger: CAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGG...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGAAGGAAAAGACACTTaGAGCACTGCTCGCCGACTG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSEGKDT*STARRL
Trigger: CAGTCGGCGAGCAGTGCTGCAAGTGTCTTTTCCTTC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAAAAGCAGGAGCGTTaGTTTGGCCAAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLQKQER*FGQTAP
Trigger: GGGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTCCACCAGTACTGGCTaGTTGACCAAACACAGAACC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSTSTG*LTKHRT
Trigger: GGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGATGTGGTGTTGCTGCTaGTCCCAAACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSMWCCC*SQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACAT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTGCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLRRMWC*CCSQTR
Trigger: TCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCG...CAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528406.1
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLSDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAATGAGTGGCTTCCTCTaGCTCCACTCAATCGCAGAG +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRMSGFL*LHSIAE
Trigger: CTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCAT...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGGCGCAGCACTGTCCTaGCTCACGCTGGCTACTATT +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLGAALS*LTLATI
Trigger: AATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTACCCAAGGGCTATCTaGACTGTGGTTAGTAGACAC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKYPRAI*TVVSRH
Trigger: GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAAAATCTGCAAGCCACTaGCTCCACCAGCGAAGACCA +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRKSASH*LHQRRP
Trigger: TGGTCTTCGCTGGTGGAGCCAGTGGCTTGCAGATTT...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTGGAACTAGCAAGCCTTaGACTTTATCAACTATTTTG +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCGTSKP*TLSTIL
Trigger: CAAAATAGTTGATAAAGTCCAAGGCTTGCTAGTTCC...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCTTATGATAGGCAAATaGGCGTTTTTGCTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDALMIGK*AFLLFS
Trigger: GCTAAACAGCAAAAACGCCCATTTGCCTATCATAAG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTGGAGCAGACACACTTaGCACTGGTGTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSWSRHT*HWCAFQ
Trigger: CTGGAAAGCACACCAGTGCCAAGTGTGTCTGCTCCA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCCTTCATTGCTATATTTaGAGCAGACACACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PPAFNLFPMWRALGPSETLHCYI*SRHTWH
Trigger: GTGCCAAGTGTGTCTGCTCCAAATATAGCAATGAAG...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGAGAGAGGTGTGGGGTaGCTGAGTGGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLERGVG*LSGPEA
Trigger: TGCTTCTGGACCACTCAGCCACCCCACACCTCTCTC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCTTGGAAACAGGCTTTaGAAGTTCGGGCTTTTAACT +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVLGNRL*KFGLLT
Trigger: AGTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAG...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTAGCCTCTTCCTCTGTTaGTTGATGATTTCCCGATTG +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGSLFLC*LMISRL
Trigger: CAATCGGGAAATCATCAACCAACAGAGGAAGAGGCT...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGGGGGACAGTTTGGCTaGTACTTTGGGCAAGGATTT +
Preference number: 4 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTGGQFG*YFGQGF
Trigger: AAATCCTTGCCCAAAGTACCAGCCAAACTGTCCCCC...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGGGGACAGTTTGGCTaGTACTTTGGGCAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGGQFG*YFGQGF
Trigger: AAATCCTTGCCCAAAGTACCAGCCAAACTGTCCCCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCAGCAGTGGATCTCACTaGTGGGGTCTTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLSSGSH*WGLPLG
Trigger: GCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGTTTCACGGTTTTCGTaGCAAGCATTGTGCTATCGG +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKVSRFS*QALCYR
Trigger: CCGATAGCACAATGCTTGCCACGAAAACCGTGAAAC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGTGAGCTTTCAGGAATaGCCTCATAAGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWVSFQE*PHKKVC
Trigger: GCAAACCTTCTTATGAGGCCATTCCTGAAAGCTCAC...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGATCCCAGCTTGGACGGTaGGGTTTCCAGCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRSQLGR*GFQLTR
Trigger: TCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGA...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGTAGAATCATCTGCTTaGCCAACCCGCAGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQVESSA*PTRSPE
Trigger: TTCAGGACTGCGGGTTGGCCAAGCAGATGATTCTAC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTTGAGGAAGTGCTGGTaGCTGCTGGTGGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLLRKCW*LLVVLL
Trigger: CAGTAGCACCACCAGCAGCCACCAGCACTTCCTCAA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTTGAGGAAGTGCTaGTGGCTGCTGGTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLQLRKC*WLLVVL
Trigger: TAGCACCACCAGCAGCCACCAGCACTTCCTCAACTG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTGTGCTATTGGTCTGTTaGCTTCCAAATGAAAAACTA +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCVLLVC*LPNEKL
Trigger: TAGTTTTTCATTTGGAAGCCAACAGACCAATAGCAC...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGGGCACTGTGCTATTaGTCTGTTGGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGALCY*SVGFQM
Trigger: CATTTGGAAGCCAACAGACCAATAGCACAGTGCCCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGTACCAAATGACAATGTaGGGAATGATGTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEYQMTM*GMMLEG
Trigger: CCCTTCCAACATCATTCCCCACATTGTCATTTGGTA...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTACCAAATGACAATGTaGGGAATGATGTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVYQMTM*GMMLEG
Trigger: CCCTTCCAACATCATTCCCCACATTGTCATTTGGTA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTTGCTGACTGCAGGCTaGGCAAGAACAGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGLLTAG*ARTGSF
Trigger: AAAAGAACCTGTTCTTGCCCAGCCTGCAGTCAGCAA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGAGCAACAATGGACGTaGTGCTGGAGGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLEQQWT*CWRLWG
Trigger: CCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGTGTTGTTGGTGAGCTaGTTGAAAGCTGAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGVLLVS*LKAELE
Trigger: TTCTAGCTCAGCTTTCAACCAGCTCACCAACAACAC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLDLVRC*LPLAQT
Trigger: TGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTCAAAGACACTTCCACTaGTGGATGTGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTQRHFH*WMWEWR
Trigger: CCTCCACTCCCACATCCACCAGTGGAAGTGTCTTTG...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTTGCTGCTGTTGTGGTaGCAGCTGAGGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSLLLLW*QLRYHQ
Trigger: TTGGTGGTACCTCAGCTGCCACCACAACAGCAGCAA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATACTGGCCGAGCTGAATaGGTTTTTGTTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHTGRAE*VFVGCI
Trigger: GATGCAGCCAACAAAAACCCATTCAGCTCGGCCAGT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCCACCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTCCTACTGGCCGAGCTGAATaGGTTTTTGTTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: QPPKPWTDELFDPKLNPPTGRAE*VFVGCI
Trigger: GATGCAGCCAACAAAAACCCATTCAGCTCGGCCAGT...AGGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATATCCACCAAATGTCTTaGCCCCACTGTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDIHQMS*PHCFQI
Trigger: TATTTGGAAACAGTGGGGCCAAGACATTTGGTGGAT...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGATCCACCAAATGTCTTaGCCCCACTGTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERIHQMS*PHCFQI
Trigger: TATTTGGAAACAGTGGGGCCAAGACATTTGGTGGAT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCATCCACCAAATGTCTTaGCCCCACTGTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVIHQMS*PHCFQI
Trigger: TATTTGGAAACAGTGGGGCCAAGACATTTGGTGGAT...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTCCAAACGACGAGCTaGCAAATCCACCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKLQTTS*QIHQMS
Trigger: AGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGAAAACCCAAAGCCTTaGGATGCCACACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQENPKP*DATLPP
Trigger: AGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSTVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGAAACCAGAAGTCTGTTaGGACAGTGATCCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMKPEVC*DSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCAGCCACCAAAACCCTaGACAGACGAGTTATTTGAC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKQPPKP*TDELFD
Trigger: GTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTATCGGGGGTGCGCTCTaGGAGCTATTTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTIGGAL*ELFSLR
Trigger: CCTTAGTGAAAATAGCTCCCAGAGCGCACCCCCGAT...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGAGCCATTACAGGATCTaGATCTTTCCACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKSHYRI*IFPLMS
Trigger: GGACATCAGTGGAAAGATTCAGATCCTGTAATGGCT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTACTTATATCTCCATaGAGCGACTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKLLISP*SDSVVS
Trigger: AGAGACCACAGAGTCGCTTCATGGAGATATAAGTAG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTCACTGTCAAAACTGTaGATGCTGCTCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQSLSKL*MLLWEG
Trigger: TCCTTCCCAGAGCAGCATTCACAGTTTTGACAGTGA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTTGGCTGTCCCTGAAGCTTTGTCACCAGATGATAACTGACCGGATGCTGGTGGTGCTATCGGCCCCTTaGGGAATAATTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: SWLSLKLCHQMITDRMLVVLSAP*GIILLA
Trigger: TGCTAGCAAAATTATTCCTCAAGGGGCCGATAGCAC...CACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGGACAGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGGAGGGGGTAGTTGCTaGACTCAGGAGGCTACCAAA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLGGGSC*TQEATK
Trigger: TTTGGTAGCCTCCTGAGTTCAGCAACTACCCCCTCC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTCGGATGAGCCAGAAGTaGCGGTACCAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETRMSQK*RYQMLL
Trigger: CAGCAGCATTTGGTACCGTCACTTCTGGCTCATCCG...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAGGAGCTACTGGTACTTaGGGCGGCACCAAAGACACT +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEGATGT*GGTKDT
Trigger: AGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCC...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGACTAGACCCAAAACCTaGAGCTTGGCAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKTRPKT*SLAKAE
Trigger: TTCAGCTTTTGCCAAGCTTCAGGTTTTGGGTCTAGT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLFLLQS*KCQWVS
Trigger: AGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTGAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLSLLGQ*SESGGI
Trigger: AATGCCCCCACTTTCGGATCACTGTCCCAACAGACT...CAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528406.1
CDS-3UTR TCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTATCAGCAATGAATGGTaGATCTCGGAAATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVISNEW*ISEISC
Trigger: GCAAGAAATTTCCGAGATTCACCATTCATTGCTGAT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR TCA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTTTCATGATCAGCAATaGATGGTGAATCTCGGAAAT +
Preference number: 4 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAFHDQQ*MVNLGN
Trigger: ATTTCCGAGATTCACCATTCATTGCTGATCATGAAA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR TCA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGTATTTGACCCAAAGCTaGACCCTGAAAAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEYLTQS*TLKSRI
Trigger: TATTCTGCTTTTCAGGGTTCAGCTTTGGGTCAAATA...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR GCA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTAATCACCATGCCTCCTaGATCTTTCAAAAGCTTATG +
Preference number: 4 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTNHHAS*IFQKLM
Trigger: CATAAGCTTTTGAAAGATGCAGGAGGCATGGTGATT...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTCATCTCCTCAGAAGTaGCCACTTGGAAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSSPQK*PLGNRL
Trigger: AAGCCTGTTTCCAAGTGGGCACTTCTGAGGAGATGA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCAAAACTGTGAATGCTaGTCTGGGAAGGAACAGCCG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSQNCEC*SGKEQP
Trigger: CGGCTGTTCCTTCCCAGAGCAGCATTCACAGTTTTG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAGATTTAGCAAAAGGTaGTGCATGGGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGRFSKR*CMGQET
Trigger: AGTCTCTTGCCCCATGCAGCACCTTTTGCTAAATCT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAAGTGTTTACAGCTGGTaGCTGACTGGCCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGSVYSW*LTGHLP
Trigger: CGGCAGATGGCCAGTCAGGCACCAGCTGTAAACACT...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTTATTAGAGACCCCTaGTTGGCTTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHFIRDP*LAWLAA
Trigger: GGCTGCTAACCAAGCCAAGCAGGGGTCTCTAATAAA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTTTTGTAGAATCATCTaGTTGGCCAACCCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHFCRII*LANPQS
Trigger: GGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAA...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGATGGGGGCACTGTaGTATTGGTCTGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLQMGAL*YWSVGF
Trigger: GAAGCCAACAGACCAATAGCACAGTGCCCCCATCTG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCACTAGTACTAGATGCTaGAGTGCCAGAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFTSTRC*SARVAD
Trigger: GTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCCAAAGCCAGGACTCTaGCCAAAAGCAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLPKPGL*PKAGAL
Trigger: CAACGCTCCTGCTTTTGGGCAGAGTCCTGGCTTTGG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTGGGTTTTTGTTGGCTaGATCCTGACTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQWVFVG*ILTGFS
Trigger: GGAAAACCCAGTCAGGATGCAGCCAACAAAAACCCA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCATGTGGTGTTGCTGCTaGTCCCAAACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLMWCCC*SQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACAT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTAGGCCTCAAAGATACTaGATTAAAGATAAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCRPQRY*IKDKEA
Trigger: TGCTTCTTTATCTTTAATGCAGTATCTTTGAGGCCT...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCCCATGCTAAGTGTCTaGCCTCCTCTGTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLPMLSV*PPLCFL
Trigger: CAAGAAGCACAGAGGAGGGCAGACACTTAGCATGGG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGAGGTTACTGCTACCGTaGAAGGAAGAGTTGCACATA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKRLLLP*KEELHI
Trigger: TATGTGCAACTCTTCCTTCCACGGTAGCAGTAACCT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAAAGTAGGAAGATACTaGACCACAGTTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERKVGRY*TTVPFC
Trigger: ACAGAATGGAACTGTGGTCCAGTATCTTCCTACTTT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGCTTGAGAGGAGGTTaGGGTAGTGGGAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGGLRGG*GSGSTS
Trigger: GGAAGTACTCCCACTACCCCAACCTCCTCTCAAGCC...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCACTCTTGGGATCCAGTaGTCTTTTATAAAGCAAATG +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKATLGIQ*SFIKQM
Trigger: CATTTGCTTTATAAAAGACCACTGGATCCCAAGAGT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAGCTGAGCTTCACTCTTaGGATCCAGTGGTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPAELHS*DPVVFY
Trigger: ATAAAAGACCACTGGATCCCAAGAGTGAAGCTCAGC...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAGCCTCTTCCTCTGTTaGTTGATGATTTCCCGATTG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGSLFLC*LMISRL
Trigger: CAATCGGGAAATCATCAACCAACAGAGGAAGAGGCT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGTTGTGCCTGTTTCATaGGGGACAGTTTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSVVPVS*GTVWLV
Trigger: TACCAGCCAAACTGTCCCCCATGAAACAGGCACAAC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTAGCAGTGGATCTCACTaGTGGGGTCTTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETSSGSH*WGLPLG
Trigger: GCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCT...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAACAAAGTGTTTACAGCTaGTGCCTGACTGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PEADGVEVTAVSILAVPEQSVYS*CLTGHL
Trigger: CAGATGGCCAGTCAGGCACCAGCTGTAAACACTTTG...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGAGGTGTTTTGGCTGTaGAGTAGGGCACTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTEVFWL*SRALKN
Trigger: GTTCTTCAGTGCCCTACTCCACAGCCAAAACACCTC...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGACTGGGTGAGGTGTTTTaGCTGTGGAGTAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGLGEVF*LWSRAL
Trigger: CAGTGCCCTACTCCACAGCCAAAACACCTCACCCAG...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATTAGAAGACGGTGTTaGTGTGATTATCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGIRRRC*CDYPKI
Trigger: AATTTTGGGATAATCACACCAACACCGTCTTCTAAT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGAGAATGCGTCCGGCTaGCTTGACTCTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLENASG*LDSLVE
Trigger: CTCCACTAAAGAGTCAAGCCAGCCGGACGCATTCTC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGTGAGCTTTCAGGAATaGCCTCATAAGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGVSFQE*PHKKVC
Trigger: GCAAACCTTCTTATGAGGCCATTCCTGAAAGCTCAC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTCCCAGCTTGGACGGTaGGGTTTCCAGCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLSQLGR*GFQLTR
Trigger: TCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGCACTGTGCTATTaGTCTGTTGGCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSGALCY*SVGFQM
Trigger: CATTTGGAAGCCAACAGACCAATAGCACAGTGCCCC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATTACCAAATGACAATGTaGGGAATGATGTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDYQMTM*GMMLEG
Trigger: CCCTTCCAACATCATTCCCCACATTGTCATTTGGTA...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTCTGTCCAAAGACCCCTaGGGCTGTGGTACCAAAAGC +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETLSKDP*GCGTKS
Trigger: GCTTTTGGTACCACAGCCCCAGGGGTCTTTGGACAG...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGAAGAGGATGATTGCTaGCCAAAGACTATTCCACCA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKEEDDC*PKTIPP
Trigger: TGGTGGAATAGTCTTTGGCCAGCAATCATCCTCTTC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGACTGGCCGAGCTGAATaGGTTTTTGTTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSTGRAE*VFVGCI
Trigger: GATGCAGCCAACAAAAACCCATTCAGCTCGGCCAGT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTTATCCACCAAATGTCTTaGCCCCACTGTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: LTRPQLRQPPKPWTDELFIHQMS*PHCFQI
Trigger: TATTTGGAAACAGTGGGGCCAAGACATTTGGTGGAT...AAATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATCTCCAAACGACGAGCTaGCAAATCCACCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHLQTTS*QIHQMS
Trigger: AGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAG...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AATAAGAGTGAAGTTAAAGCACGCATCCACTCGAAAGACAAAGGTGGTCCCCATGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: NKSEVKARIHSKDKGGPHACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...ATGGGGACCACCTTTGTCTTTCGAGTGGATGCGTGCTTTAACTTCACTCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTGACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLTVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...CAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528406.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLTVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTaGGTAGGTGTGGCTACCAAT +
Preference number: 4 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTVVSRH*VGVATN
Trigger: ATTGGTAGCCACACCTACCCAGTGTCTACTAACCAC...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CAA 72 bp GCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTaGGATGGTCCTGATACACAATGGCTAAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: ASSASTQSQSAS*DGPDTQWLKEQ
Trigger: TTGTTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCTGTTTAGCCTCATTTaGGAATGTGCGAACATCAAA +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLFSLI*ECANIK
Trigger: TTTGATGTTCGCACATTCTCAAATGAGGCTAAACAG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCTGTTGAAAGTAACATaGGAACTGGAGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFLLKVT*ELEQEE
Trigger: TTCCTCCTGCTCCAGTTCTCATGTTACTTTCAACAG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGATCACTGTCAAAACTGTaGATGCTGCTCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRSLSKL*MLLWEG
Trigger: TCCTTCCCAGAGCAGCATTCACAGTTTTGACAGTGA...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGACATTCTTCAACGTTaGTTCAGTCAAAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVDILQR*FSQSVY
Trigger: GTAAACACTTTGACTGAATCAACGTTGAAGAATGTC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTGTATTTGACCCAAAGCTaGACCCTCCTGTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLYLTQS*TLLCLI
Trigger: GATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATA...CAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528406.1
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIDRKAC*HALSFA
Trigger: GGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGTCCTTGGATGGTCCTaGTACACAATGGCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHVLGWS*YTMAKR
Trigger: TCTTTTAGCCATTGTGTATCAGGACCATCCAAGGAC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGTCATATCAATCACCATaGCTCCTGCATCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVSYQSP*LLHLSK
Trigger: TTTTGAAAGATGCAGGAGGCATGGTGATTGATATGA...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAATCAGCCAGACAAACTaGCACCATGGAGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGISQTN*HHGGDS
Trigger: ACTGTCCCCTCCATGGTGGCAGTTTGTCTGGCTGAT...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGAAGGAGGGCTTCATTaGTATATTTGGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQEGGLH*YIWSRH
Trigger: GTGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGAGGAGTAGAGGTAGCTaGAGCAGTAAACTTTTCACT +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKRSRGS*SSKLFT
Trigger: AGTGAAAAGTTTACTGCTGCAGCTACCTCTACTCCT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000451030.5
CDS-3UTR GCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACTCCTTCTGAAAGTGTaGAATCTCCTCCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRLLLKV*NLLPNS
Trigger: GGAATTGGGGAGGAGATTGCACACTTTCAGAAGGAG...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTCCAAAAGAAAGGTATaGAAGTCATCTGATTCTGTT +
Preference number: 4 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKASKRKV*KSSDSV
Trigger: AACAGAATCAGATGACTTGCATACCTTTCTTTTGGA...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAAAACTGTGAATGCTaGTCTGGGAAGGAACAGCCG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLQNCEC*SGKEQP
Trigger: CGGCTGTTCCTTCCCAGAGCAGCATTCACAGTTTTG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTTTACAGGACGTCCGTaGATCTTCACTCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSFTGRP*IFTLQR
Trigger: TCTCTGGAGAGTGAAGATGCACGGACGTCCTGTAAA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAAGGGGCCTGAACCACTaGCTCGTCATCTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGRGLNH*LVIFTG
Trigger: TCCTGTAAAGATGACGAGGCAGTGGTTCAGGCCCCT...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGGTGGGAAGGACTAGGTaGACCATGTTTCACGGTTTT +
Preference number: 4 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKVGRTR*TMFHGF
Trigger: AAAACCGTGAAACATGGTGCACCTAGTCCTTCCCAC...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCATCTGCCGCCTGAGTaGTGCTGCGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLHLPPE*CCGSCL
Trigger: CAGGCAGCTGCCGCAGCAGCACTCAGGCGGCAGATG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTTGGCTGTCCCTGAAGCTTTGTCACCAGATGATAACTGACCGGATGCTGGTGGGCTGTAGAAGGGGTTaGAGGGTTATTCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: SWLSLKLCHQMITDRMLVGCRRG*RVILQF
Trigger: GAATTGAAGAATAACCCTGCAACCCCTTCTACAGCC...CACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGGACAGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCCTCATAAGAAGGTTTaGTTCCCCCACCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSPHKKV*FPHQMR
Trigger: TCTCATCTGGTGGGGGAAGCAAACCTTCTTATGAGG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGAGCAGTTCCAGAAGGTaGCACAGGTCTGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLSSSRR*HRSAAR
Trigger: TCTAGCAGCAGACCTGTGGCACCTTCTGGAACTGCT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATATCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEISCAGS*SALSEH
Trigger: GTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGA...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGAGGATGTGGTGTTGCTaGTGCTCCCAAACCCGAATC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLRMWCC*CSQTRI
Trigger: GATTCGGGTTTGGGAGCAGCAGCAACACCACATCCT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCCACGGCACATTCGATaGTGTTTATCAACACCCGAC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLPRHIR*CLSTPD
Trigger: GTCGGGTGTTGATAAACAGCATCGAATGTGCCGTGG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGATCTCGGAAATTTCTTaGAAGTCACACTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKISEIS*KSHYLP
Trigger: GGGCAAGTAGTGTGACTTGCAAGAAATTTCCGAGAT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR CCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATGGAACTAGCAAGCCTTaGACTTTATCAACTATTTTG +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDGTSKP*TLSTIL
Trigger: CAAAATAGTTGATAAAGTCCAAGGCTTGCTAGTTCC...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGGAACTAGCAAGCCTTaGACTTTATCAACTATTTTG +
Preference number: 4 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVGTSKP*TLSTIL
Trigger: CAAAATAGTTGATAAAGTCCAAGGCTTGCTAGTTCC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGGAACCATATTCACTaGACATCATGCACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHWNHIH*TSCTQR
Trigger: TCTCTGCGTGCATGATGTCCAGTGAATATGGTTCCA...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCTTATGATAGGCAAATaGGCGTTTTTGCTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMLMIGK*AFLLFS
Trigger: GCTAAACAGCAAAAACGCCCATTTGCCTATCATAAG...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAAGACACACTTGGCACTaGTGTGCTTTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGRHTWH*CAFQGR
Trigger: CCTACCCTGGAAAGCACACCAGTGCCAAGTGTGTCT...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCTTCATTGCTATATTTaGAGCAGACACACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGLHCYI*SRHTWH
Trigger: GTGCCAAGTGTGTCTGCTCCAAATATAGCAATGAAG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTACTCTTGGGATCCAGTaGTCTTTTATAAAGCAAATG +
Preference number: 4 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVTLGIQ*SFIKQM
Trigger: CATTTGCTTTATAAAAGACCACTGGATCCCAAGAGT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGCTGAGCTTCACTCTTaGGATCCAGTGGTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQAELHS*DPVVFY
Trigger: ATAAAAGACCACTGGATCCCAAGAGTGAAGCTCAGC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGAGCCTCTTCCTCTGTTaGTTGATGATTTCCCGATTG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQSLFLC*LMISRL
Trigger: CAATCGGGAAATCATCAACCAACAGAGGAAGAGGCT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCAGCCTCTTCCTCTGTTaGTTGATGATTTCCCGATTG +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFSLFLC*LMISRL
Trigger: CAATCGGGAAATCATCAACCAACAGAGGAAGAGGCT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGTTGTGCCTGTTTCATaGGGGACAGTTTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLVVPVS*GTVWLV
Trigger: TACCAGCCAAACTGTCCCCCATGAAACAGGCACAAC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGGTTTCACGGTTTTCGTaGCAAGCATTGTGCTATCGG +
Preference number: 4 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKVSRFS*QALCYR
Trigger: CCGATAGCACAATGCTTGCCACGAAAACCGTGAAAC...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAAAGTGTTTACAGCTaGTGCCTGACTGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLQSVYS*CLTGHL
Trigger: CAGATGGCCAGTCAGGCACCAGCTGTAAACACTTTG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGAGAATGCGTCCGGCTaGCTTGACTCTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETENASG*LDSLVE
Trigger: CTCCACTAAAGAGTCAAGCCAGCCGGACGCATTCTC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGAGAATGCGTCCGGCTaGCTTGACTCTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLENASG*LDSLVE
Trigger: CTCCACTAAAGAGTCAAGCCAGCCGGACGCATTCTC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGTGAGCTTTCAGGAATaGCCTCATAAGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFVSFQE*PHKKVC
Trigger: GCAAACCTTCTTATGAGGCCATTCCTGAAAGCTCAC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAATCCCAGCTTGGACGGTaGGGTTTCCAGCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKESQLGR*GFQLTR
Trigger: TCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGA...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTGTGCTATTGGTCTGTTaGCTTCCAAATGAAAAACTA +
Preference number: 4 (lower is better)
Translates to: ADTPSASPATKTLDRRVIVLLVC*LPNEKL
Trigger: TAGTTTTTCATTTGGAAGCCAACAGACCAATAGCAC...AATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGTGCTATTGGTCTGTTaGCTTCCAAATGAAAAACTA +
Preference number: 4 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERVLLVC*LPNEKL
Trigger: TAGTTTTTCATTTGGAAGCCAACAGACCAATAGCAC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCAAAGACACTTCCACTaGTGGATGTGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLQRHFH*WMWEWR
Trigger: CCTCCACTCCCACATCCACCAGTGGAAGTGTCTTTG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCAAATGAGAAGGAACTaGAGCTACTGGTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQQMRRN*SYWYLR
Trigger: CCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCTATTCCACCAGTACTaGCTGCTTGACCAAACACAG +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSLFHQY*LLDQTQ
Trigger: CTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGAAGAGGATGATTGCTaGCCAAAGACTATTCCACCA +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFEEDDC*PKTIPP
Trigger: TGGTGGAATAGTCTTTGGCCAGCAATCATCCTCTTC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGAAGAGGATGATTGCTaGCCAAAGACTATTCCACCA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQEEDDC*PKTIPP
Trigger: TGGTGGAATAGTCTTTGGCCAGCAATCATCCTCTTC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGATCCACCAAATGTCTTaGCCCCACTGTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGIHQMS*PHCFQI
Trigger: TATTTGGAAACAGTGGGGCCAAGACATTTGGTGGAT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGATCCACCAAATGTCTTaGCCCCACTGTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKIHQMS*PHCFQI
Trigger: TATTTGGAAACAGTGGGGCCAAGACATTTGGTGGAT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIRILLR*QLQCPL
Trigger: GAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR CCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETTVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGAAACCAGAAGTCTGTTaGGACAGTGATCCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQKPEVC*DSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCAGCCACCAAAACCCTaGACAGACGAGTTATTTGAC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSQPPKP*TDELFD
Trigger: GTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGATCTGCTAGTGTTGTCTaGCAACAGCAGTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRSASVV*QQQCLS
Trigger: AGACAGACACTGCTGTTGCCAGACAACACTAGCAGA...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGATTTAGCGCTCTAAACTaGAAATCCTTCATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRFSALN*KSFISR
Trigger: GCGGGAGATGAAGGATTTTCAGTTTAGAGCGCTAAA...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGTTTAGCCTCATTTaGGAATGTGCGAACATCAAA +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKLFSLI*ECANIK
Trigger: TTTGATGTTCGCACATTCTCAAATGAGGCTAAACAG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGATACTAACTTCTGTTaGAGCCGCAGATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETDTNFC*SRRCCQ
Trigger: CTGGCAGCATCTGCGGCTTCAACAGAAGTTAGTATC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGTATGCAAGTCATCTaGTTCTGTTCGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSGMQVI*FCSQHL
Trigger: AAGATGCTGCGAACAGAATCAGATGACTTGCATACC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTCACTGTCAAAACTGTaGATGCTGCTCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLSLSKL*MLLWEG
Trigger: TCCTTCCCAGAGCAGCATTCACAGTTTTGACAGTGA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGACATTCTTCAACGTTaGTTCAGTCAAAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGDILQR*FSQSVY
Trigger: GTAAACACTTTGACTGAATCAACGTTGAAGAATGTC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAAGAAGCAGATGGGGTTaGAGTCACAGCTGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: PEADGVEVTAVSILAVPERSRWG*SHSCFY
Trigger: ATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCT...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAATGAGAAAGGCTTGCTaGACTGCCCAGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEMRKAC*TAQKQM
Trigger: CATCTGCTTCTGGGCAGTTCAGCAAGCCTTTCTCAT...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGATGAGAAAGGCTTGCTaGACTGCCCAGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLMRKAC*TAQKQM
Trigger: CATCTGCTTCTGGGCAGTTCAGCAAGCCTTTCTCAT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGACCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTA +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGPVLAA*PNTEPV
Trigger: TACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGG...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTCCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTA +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETPVLAA*PNTEPV
Trigger: TACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGG...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATATGTAAAGGCTGGGGCTaGACCGAATGCTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEICKGWG*TECWHP
Trigger: GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACA...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIKVGAF*LASVPK
Trigger: CTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATATCTCGGGGAAGAAGCTaGGGATGCGGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEISRGRS*GCGWSQ
Trigger: CTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGA...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTCAGATTCTGGGCCTaGAAGAGAAATTCTTACATC +
Preference number: 4 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTVRFWA*KRNSYI
Trigger: GATGTAAGAATTTCTCTTTCAGGCCCAGAATCTGAC...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACGCAAATGGGCGTTTTTaGTGTTTAGCCTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHANGRF*CLASFE
Trigger: CTCAAATGAGGCTAAACAGCAAAAACGCCCATTTGC...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGCAAATGGGCGTTTTTaGTGTTTAGCCTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHANGRF*CLASFE
Trigger: CTCAAATGAGGCTAAACAGCAAAAACGCCCATTTGC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGCACACAGAGGTTACTaGTACCGTGGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLAHRGY*YRGRKS
Trigger: ACTCTTCCTTCCACGGTAGCAGTAACCTCTGTGTGC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp GAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCTAGATTTAGCAAAAGGTaGTGCATGGGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: EADGVEVTAVSILAVPEARFSKR*CMGQET
Trigger: AGTCTCTTGCCCCATGCAGCACCTTTTGCTAAATCT...AGCTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGCTGTAGAAGGGGTTaGAGGGTTATTCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSGCRRG*RVILQF
Trigger: GAATTGAAGAATAACCCTGCAACCCCTTCTACAGCC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAAAGACTAGTACTAGATaGTGCAGTGCCAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRKTSTR*CSARVA
Trigger: AGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTT...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGAAGACTAGTACTAGATaGTGCAGTGCCAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSKTSTR*CSARVA
Trigger: AGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGGAAGCAGGTGGTACTaGCTCCGTCCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIGSRWY*LRPGIR
Trigger: CCTGATGCCAGGACGGAGGCAGTACCACCTGCTTCC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTGGTGCGGTGCTGGCTaGCACTTGCCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLWCGAG*HLPKHG
Trigger: CCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGCACTGCTCGCCGACTaGCCAAAGACTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLALLAD*PKTEAC
Trigger: GCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACCTCTCCGAACACTTTaGCTCCCGTCGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIPLRTL*LPSSPE
Trigger: CTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACGCTGGCAGCTGCAGTaGCCTCTCCGAACACTTTGC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIRWQLQ*PLRTLC
Trigger: GCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAAAACCCGAATCCTCCTaGGCTGGCAGCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIKPESS*AGSCSA
Trigger: GGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCCACGGCACATTCGATaGTGTTTATCAACACCCGAC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLPRHIR*CLSTPD
Trigger: GTCGGGTGTTGATAAACAGCATCGAATGTGCCGTGG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGAGGCCTCAAAGATACTaGATTAAAGATAAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: EALLASQSHRNGAIFLAVRPQRY*IKDKEA
Trigger: TGCTTCTTTATCTTTAATGCAGTATCTTTGAGGCCT...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGATGGAACCATATTCACTaGACATCATGCACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRWNHIH*TSCTQR
Trigger: TCTCTGCGTGCATGATGTCCAGTGAATATGGTTCCA...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGAGGTTACTGCTACCGTaGAAGGAAGAGTTGCACATA +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSRLLLP*KEELHI
Trigger: TATGTGCAACTCTTCCTTCCACGGTAGCAGTAACCT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAACTACGACAACTCCCATaGGCAAGGAGTCATCACTCT +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKELRQLP*ARSHHS
Trigger: AGAGTGATGACTCCTTGCCCATGGGAGTTGTCGTAG...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGAAGCAAAGAAAAAGTaGCAATGGGAGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLEAKKK*QWEQQV
Trigger: CACCTGCTGCTCCCATTGCCACTTTTTCTTTGCTTC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATATTAGAAGACGGTGTTaGTGTGATTATCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: VASSASTQSQSASLDGPDIRRRC*CDYPKI
Trigger: AATTTTGGGATAATCACACCAACACCGTCTTCTAAT...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGTGAGCTTTCAGGAATaGCCTCATAAGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSVSFQE*PHKKVC
Trigger: GCAAACCTTCTTATGAGGCCATTCCTGAAAGCTCAC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTCCAGCCAAAGAACTTaGAAACAGAAGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLSSQRT*KQKLSQ
Trigger: CTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGGA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGTAGAATCATCTGCTTaGCCAACCCGCAGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLVESSA*PTRSPE
Trigger: TTCAGGACTGCGGGTTGGCCAAGCAGATGATTCTAC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGACGTCTTGGTTGGCTaGGTACTAGTTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGDVLVG*VLVRLV
Trigger: CACAAGCCTAACTAGTACCCAGCCAACCAAGACGTC...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTGCTATTGGTCTGTTaGCTTCCAAATGAAAAACTA +
Preference number: 4 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDVLLVC*LPNEKL
Trigger: TAGTTTTTCATTTGGAAGCCAACAGACCAATAGCAC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CAGCCACCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTCCTTACCAAATGACAATGTaGGGAATGATGTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QPPKPWTDELFDPKLNPPYQMTM*GMMLEG
Trigger: CCCTTCCAACATCATTCCCCACATTGTCATTTGGTA...AGGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTTGCTGACTGCAGGCTaGGCAAGAACAGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLLLTAG*ARTGSF
Trigger: AAAAGAACCTGTTCTTGCCCAGCCTGCAGTCAGCAA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTGGTGCTGGAGGCTATaGGGGTACTTGATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLWCWRL*GYLMFR
Trigger: TCGAAACATCAAGTACCCCCATAGCCTCCAGCACCA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGAAAACCCAAAGCCTTaGGATGCCACACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLENPKP*DATLPP
Trigger: AGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CCACCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTGAAAAGCAGCCACCAAAACCCTaGACAGACGAGTTATTTGAC +
Preference number: 4 (lower is better)
Translates to: PPKPWTDELFDPKLNPEKQPPKP*TDELFD
Trigger: GTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG...CTTTTCAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGCACATCCAGAACTCTaGCAGGATGATCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLAHPEL*QDDLTH
Trigger: ATGAGTCAGATCATCCTGTCAGAGTTCTGGATGTGC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGCACATCCAGAACTCTaGCAGGATGATCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETAHPEL*QDDLTH
Trigger: ATGAGTCAGATCATCCTGTCAGAGTTCTGGATGTGC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATATTCCTCAATGTAACTaGGGTAGTAATGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHIPQCN*GSNDAV
Trigger: GACAGCATCATTACTACCTCAGTTACATTGAGGAAT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTTTTGTTCCAGATGCTaGTCCCACTCCAAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLFCSRC*SHSKSR
Trigger: TCTAGACTTGGAGTGGGATCAGCATCTGGAACAAAA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGGCAAGGATTTGGTGTaGGATTCTATGGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLGKDLV*DSMVVF
Trigger: GAAAACCACCATAGAATCTCACACCAAATCCTTGCC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGATGACGTTGAGCTaGCTTCATCCAAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLQMTLS*LHPSLH
Trigger: ATGAAGACTTGGATGAAGTCAGCTCAACGTCATCTG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAATGCACATTTACCACTTaGGGGACATTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: PEADGVEVTAVSILAVPECTFTT*GTFFNV
Trigger: AACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCA...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCAGAAGCAGATGGGGTTaGAGTCACAGCTGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLRSRWG*SHSCFY
Trigger: ATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCACTAGACCCAAAACCTaGAGCTTGGCAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLTRPKT*SLAKAE
Trigger: TTCAGCTTTTGCCAAGCTTCAGGTTTTGGGTCTAGT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGATGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTCATATCAATCACCATaGCTCCTGCATCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGSYQSP*LLHLSK
Trigger: TTTTGAAAGATGCAGGAGGCATGGTGATTGATATGA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTTCATCTCCTCAGAAGTaGCCACTTGGAAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETSSPQK*PLGNRL
Trigger: AAGCCTGTTTCCAAGTGGGCACTTCTGAGGAGATGA...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGAAGTTTCTCAGTTGTaGCTGTTTCATGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETEVSQL*LFHGGQ
Trigger: CTGTCCCCCATGAAACAGGCACAACTGAGAAACTTC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGAAGTTTCTCAGTTGTaGCTGTTTCATGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGEVSQL*LFHGGQ
Trigger: CTGTCCCCCATGAAACAGGCACAACTGAGAAACTTC...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTTTTGTAGAATCATCTaGTTGGCCAACCCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLFCRII*LANPQS
Trigger: GGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATATCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEISDSRA*RRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGACAAACTGCCACCATaGAGGGGACAGTGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIDKLPP*RGQWGS
Trigger: GGAACCCCACTGTCCCCTCCATGGTGGCAGTTTGTC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGACAGCAGCATACACTATaGCGAAGACGTAGGTACCAA +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGQQHTL*RRRRYQ
Trigger: TTGGTACCTACGTCTTCGCCATAGTGTATGCTGCTG...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGACTGGAGGGGTTATCCTaGGTGATTTCTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGLEGLS*VISVPL
Trigger: CAATGGTACAGAAATCACCCAGGATAACCCCTCCAG...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGACTCTTGGGATCCAGTaGTCTTTTATAAAGCAAATG +
Preference number: 4 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGTLGIQ*SFIKQM
Trigger: CATTTGCTTTATAAAAGACCACTGGATCCCAAGAGT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCTTTGGGCAAGGATTTaGTGTGAGATTCTATGGTGG +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLLWARI*CEILWW
Trigger: CCACCATAGAATCTCACACCAAATCCTTGCCCAAAG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCTGCCCAAACAGACTTaGTGCGGTGCTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLLPKQT*CGAGCH
Trigger: GTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIACRRM*CCCCSQ
Trigger: TTGGGAGCAGCAGCAACACCACATCCTTCGGCACGC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCAGCCACCAAAACCCTaGACAGACGAGTTATTTGAC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLQPPKP*TDELFD
Trigger: GTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAGGTCCTGATACACAATaGCTAAAAGAACAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRGPDTQ*LKEQGE
Trigger: CTCTCCTTGTTCTTTTAGCCATTGTGTATCAGGACC...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACAGCCACCAAAACCCTaGACAGACCTCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIQPPKP*TDLLCL
Trigger: CAGGCACAGGAGGTCTGTCCAGGGTTTTGGTGGCTG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476004.5
3UTR CAA 72 bp AACACTGTTGTCAAATCCAGCATCGTTCTGCTAGTGTaGTCTGGCAACAGCAGTGTCTGTCTTCACACTTCC +
Preference number: 4 (lower is better)
Translates to: NTVVKSSIVLLV*SGNSSVCLHTS
Trigger: GGAAGTGTGAAGACAGACACTGCTGTTGCCAGACAACACTAGCAGAACGATGCTGGATTTGACAACAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGAGCCATTACAGGATCTaGATCTTTCCACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLSHYRI*IFPLMS
Trigger: GGACATCAGTGGAAAGATTCAGATCCTGTAATGGCT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGTATGCAAGTCATCTaGTTCTGTTCGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGGMQVI*FCSQHL
Trigger: AAGATGCTGCGAACAGAATCAGATGACTTGCATACC...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTTTTGTTCCAGATGCTaGTCCCACTCCAAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLFCSRC*SHSKSR
Trigger: TCTAGACTTGGAGTGGGATCAGCATCTGGAACAAAA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGACATTCTTCAACGTTaGTTCAGTCAAAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHDILQR*FSQSVY
Trigger: GTAAACACTTTGACTGAATCAACGTTGAAGAATGTC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTGCACATTTACCACTTaGGGGACATTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLCTFTT*GTFFNV
Trigger: AACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR TCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCAGTGCCAGAGTTGCTaGCTGCAGGCTGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLQCQSC*LQAGQE
Trigger: TTCTTGCCCAGCCTGCAGTCAGCAACTCTGGCACTG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGGCTATGGGGGTACTTaGTGTTTCGACGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLGYGGT*CFDGHR
Trigger: CCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAATGGCAACGTCGGTCTaGACAGCCTGCTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIMATSV*TACSSI
Trigger: AATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCAT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR GCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTTTAGTAGGAAAAATCTaGAAGCCACTGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETLVGKI*KPLAPP
Trigger: TGGTGGAGCCAGTGGCTTGCAGATTTTTCCTACTAA...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTCCAAAAGAAAGGTATaGAAGTCATCTGATTCTGTT +
Preference number: 4 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKSKRKV*KSSDSV
Trigger: AACAGAATCAGATGACTTGCATACCTTTCTTTTGGA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGACGGTACCAAATGCTaGTGCCTCTGCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLDGTKC*CLCRWA
Trigger: GGCCCATCTGCAGAGGCAGCAGCATTTGGTACCGTC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCCCAAACAGACTTGGTaGGGTGCTGGCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLPKQTW*GAGCHL
Trigger: CAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTCTGGAAGAGGATGATTaGTGGCCAAAGACTATTCCA +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETLEEDD*WPKTIP
Trigger: TGGAATAGTCTTTGGCCAGCAATCATCCTCTTCCAG...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIRRMWC*CCSQTR
Trigger: TCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGCAAAAGGTGCTGCATaGGGCAAGAGACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLAKGAA*GKRLGW
Trigger: CCAGCCCAGTCTCTTGCCCCATGCAGCACCTTTTGC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGTGCTATTGGTCTGTTaGCTTCCAAATGAAAAACTA +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQVLLVC*LPNEKL
Trigger: TAGTTTTTCATTTGGAAGCCAACAGACCAATAGCAC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTGGTGGTGGGGCAGATaGGGGCACTGTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLWWWGR*GHCAIG
Trigger: ACCAATAGCACAGTGCCCCCATCTGCCCCACCACCA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTGGCAGCTGCTGTGCTaGCTGTGCTACCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLWQLLC*LCYQSA
Trigger: AGCAGACTGGTAGCACAGCCAGCACAGCAGCTGCCA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp AATAAGAGTGAAGTTAAAGCACGCATCCACTCGAAAGACAAAGGTGGTCCCCATCTATTCCACCAGTACTaGCTGCTTGACCAAACACAG +
Preference number: 4 (lower is better)
Translates to: NKSEVKARIHSKDKGGPHLFHQY*LLDQTQ
Trigger: CTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAG...ATGGGGACCACCTTTGTCTTTCGAGTGGATGCGTGCTTTAACTTCACTCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGAAACCAGAAGTCTGTTaGGACAGTGATCCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLKPEVC*DSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCTGTTTAGCCTCATTTaGGAATGTGCGAACATCAAA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLLFSLI*ECANIK
Trigger: TTTGATGTTCGCACATTCTCAAATGAGGCTAAACAG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp GAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCTGACATTCTTCAACGTTaGTTCAGTCAAAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: EADGVEVTAVSILAVPEADILQR*FSQSVY
Trigger: GTAAACACTTTGACTGAATCAACGTTGAAGAATGTC...AGCTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR TCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTTGCACATTTACCACTTaGGGGACATTCTTCAACGTT +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETCTFTT*GTFFNV
Trigger: AACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCA...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEISLLGQ*SESGGI
Trigger: AATGCCCCCACTTTCGGATCACTGTCCCAACAGACT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR TCA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGATTCTTGGCTGTGATCTaGAAAAACCCACATACGTTC +
Preference number: 4 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGFLAVI*KNPHTF
Trigger: GAACGTATGTGGGTTTTTTCAGATCACAGCCAAGAA...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGTCAGATTCTGGGCCTaGAAGAGAAATTCTTACATC +
Preference number: 4 (lower is better)
Translates to: HAGYYCTVLKSAMAASETVRFWA*KRNSYI
Trigger: GATGTAAGAATTTCTCTTTCAGGCCCAGAATCTGAC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACAGACCTCCTGTGCCTaGTCCAAAACCAGAGAATCC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIQTSCA*SKTRES
Trigger: GGATTCTCTGGTTTTGGATCAGGCACAGGAGGTCTG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476004.5
CDS-3UTR GCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAGCAAATGGGCGTTTTTaGTGTTTAGCCTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEANGRF*CLASFE
Trigger: CTCAAATGAGGCTAAACAGCAAAAACGCCCATTTGC...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGATGCTGTCTCTCCGTaGAGCTGCCATAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLDAVSP*SCHNRA
Trigger: AGCCCTGTTATGGCAGCTGCACGGAGAGACAGCATC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTCCAAAAGAAAGGTATaGAAGTCATCTGATTCTGTT +
Preference number: 4 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHSKRKV*KSSDSV
Trigger: AACAGAATCAGATGACTTGCATACCTTTCTTTTGGA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACAGATGGGGGCACTGTaGTATTGGTCTGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIQMGAL*YWSVGF
Trigger: GAAGCCAACAGACCAATAGCACAGTGCCCCCATCTG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGCTGTGCTACCAGTCTaGTGCCCAAACAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIAVLPV*CPNRLG
Trigger: ACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACAGC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAATGTGGTGTTGCTGCTaGTCCCAAACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIMWCCC*SQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACAT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAAGGATGTGGTGTTGCTaGTGCTCCCAAACCCGAATC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIRMWCC*CSQTRI
Trigger: GATTCGGGTTTGGGAGCAGCAGCAACACCACATCCT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR GCA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCTACTTGCCCAGACATaGATAAAGCAAAGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLLLAQT*IKQSSL
Trigger: TAAGGAACTTTGCTTTATGCATGTCTGGGCAAGTAG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR CCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAACTTCATTGCTATATTTaGAGCAGACACACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKELHCYI*SRHTWH
Trigger: GTGCCAAGTGTGTCTGCTCCAAATATAGCAATGAAG...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCATTAGAAGACGGTGTTaGTGTGATTATCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFIRRRC*CDYPKI
Trigger: AATTTTGGGATAATCACACCAACACCGTCTTCTAAT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGATTAGAAGACGGTGTTaGTGTGATTATCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQIRRRC*CDYPKI
Trigger: AATTTTGGGATAATCACACCAACACCGTCTTCTAAT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGTGCTATTGGTCTGTTaGCTTCCAAATGAAAAACTA +
Preference number: 4 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTVLLVC*LPNEKL
Trigger: TAGTTTTTCATTTGGAAGCCAACAGACCAATAGCAC...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTACCAAATGACAATGTaGGGAATGATGTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLYQMTM*GMMLEG
Trigger: CCCTTCCAACATCATTCCCCACATTGTCATTTGGTA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGA +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEITVIRK*GHSDSR
Trigger: TCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAAACCTCTTCCCTATGTaGAGGGCGCTAGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEINLFPM*RALGPS
Trigger: ACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATATGCAGTGATGAGCTCTaGGCCGTCCTAGCAAACACT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEICSDEL*AVLANT
Trigger: AGTGTTTGCTAGGACGGCCCAGAGCTCATCACTGCA...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAATTCCTCAATGTAACTaGGGTAGTAATGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEIPQCN*GSNDAV
Trigger: GACAGCATCATTACTACCTCAGTTACATTGAGGAAT...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTCACCAGATGATAACTaGCCGGATGCTGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLSPDDN*PDAGVG
Trigger: GCCTACACCAGCATCCGGTCAGTTATCATCTGGTGA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGAGCTGGGCTGACTGTTaGTCCTCTAGAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLSWADC*SSRSEA
Trigger: AGCCTCACTTCTAGAGGAGCAACAGTCAGCCCAGCT...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGATGTGGTGTTGCTGCTaGTCCCAAACCCGAATCCTC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLMWCCC*SQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACAT...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR GCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATATGGACAGACCTCCTGTaGCTGATCCAAAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIWTDLL*LIQNQR
Trigger: TCTCTGGTTTTGGATCAGGCACAGGAGGTCTGTCCA...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476004.5
CDS-3UTR CCA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTTATGATAGGCAAATaGGCGTTTTTGCTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLLMIGK*AFLLFS
Trigger: GCTAAACAGCAAAAACGCCCATTTGCCTATCATAAG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAAAAGTAGGAAGATACTaGACCACAGTTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEKVGRY*TTVPFC
Trigger: ACAGAATGGAACTGTGGTCCAGTATCTTCCTACTTT...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCACTGGGGTCAACACTaGGTGAGGTGTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLHWGQH*VRCFGC
Trigger: ACAGCCAAAACACCTCACCCAGTGTTGACCCCAGTG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR TCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTA +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLPVLAA*PNTEPV
Trigger: TACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR TCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGACAGACGAGTTATTTaGCCCAAAGCTGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLDRRVI*PKAEPS
Trigger: GGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000528406.1
ENST00000652454.1
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATATGGGTGTATGTGTTTTaGTGGCAACGTCGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIWVYVF*WQRRSE
Trigger: TTCAGACCGACGTTGCCATCAAAACACATACACCCA...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATATCAGCCTCAAAAAGATaGCCCACCAGCATTCAACCT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEISASKR*PTSIQP
Trigger: AGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGA...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGAGACGGTCCTTGTTTaGTGGCAACTATCTAGGATG +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIETVLV*WQLSRM
Trigger: CATCCTAGATAGTTGCCATCAAACAAGGACCGTCTC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTTTAGTGGAGGGTGTTaGCCCTTGTGCAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLFSGGC*PLCSSE
Trigger: TTCACTGCTGCACAAGGGGCAACACCCTCCACTAAA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLENPLL*VPKPEV
Trigger: GACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTGTCTTCACACTTCCTaGGTCTACCCAAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLCLHTS*VYPRAI
Trigger: GATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
3UTR CAA 72 bp GAAATTCTTACATCTGTTTTCAATGCGAGACGGTCCTaGTTTGATGGCAACTATCTAGGATGTTACAGGCCT +
Preference number: 4 (lower is better)
Translates to: EILTSVFNARRS*FDGNYLGCYRP
Trigger: AGGCCTGTAACATCCTAGATAGTTGCCATCAAACAAGGACCGTCTCGCATTGAAAACAGATGTAAGAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGCACATCCAGAACTCTaGCAGGATGATCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLAHPEL*QDDLTH
Trigger: ATGAGTCAGATCATCCTGTCAGAGTTCTGGATGTGC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGGGTGTTGCCCCTTGTaGAGCAGTGAAATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLGCCPL*SSEIRR
Trigger: TCTTCTAATTTCACTGCTGCACAAGGGGCAACACCC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCCTCATAAGAAGGTTTaGTTCCCCCACCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLPHKKV*FPHQMR
Trigger: TCTCATCTGGTGGGGGAAGCAAACCTTCTTATGAGG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTGGGTTTTTGTTGGCTaGATCCTGACTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLWVFVG*ILTGFS
Trigger: GGAAAACCCAGTCAGGATGCAGCCAACAAAAACCCA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCAGCAGCATACACTATaGCGAAGACGTAGGTACCAA +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLQQHTL*RRRRYQ
Trigger: TTGGTACCTACGTCTTCGCCATAGTGTATGCTGCTG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGCTGAGCTTCACTCTTaGGATCCAGTGGTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIAELHS*DPVVFY
Trigger: ATAAAAGACCACTGGATCCCAAGAGTGAAGCTCAGC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTTGCTGACTGCAGGCTaGGCAAGAACAGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLLLTAG*ARTGSF
Trigger: AAAAGAACCTGTTCTTGCCCAGCCTGCAGTCAGCAA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGTGTTGTTGGTGAGCTaGTTGAAAGCTGAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIVLLVS*LKAELE
Trigger: TTCTAGCTCAGCTTTCAACCAGCTCACCAACAACAC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAAAACCAGAAGTCTGTTaGGACAGTGATCCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIKPEVC*DSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTGTCCTGCCTCACGCTaGCTACTATTGTACTGTACT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLCPASR*LLLYCT
Trigger: AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR TCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAACTATTGTACTGTACTaGAAAGCGCTATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEITIVLY*KALWLL
Trigger: AAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR GCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGGCTGTAGAAGGGGTTaGAGGGTTATTCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLGCRRG*RVILQF
Trigger: GAATTGAAGAATAACCCTGCAACCCCTTCTACAGCC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGTGAGCTTTCAGGAATaGCCTCATAAGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLVSFQE*PHKKVC
Trigger: GCAAACCTTCTTATGAGGCCATTCCTGAAAGCTCAC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGTGTTGTTGGTGAGCTaGTTGAAAGCTGAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLVLLVS*LKAELE
Trigger: TTCTAGCTCAGCTTTCAACCAGCTCACCAACAACAC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGAAACCAGAAGTCTGTTaGGACAGTGATCCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLKPEVC*DSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTATCTTGGCTGTCCCTaGCAAGTGAAAACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLYLGCP*QVKTEV
Trigger: CACTTCTGTTTTCACTTGCCAGGGACAGCCAAGATA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS-3UTR CCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGAAAGTAGGAAGATACTaGACCACAGTTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLKVGRY*TTVPFC
Trigger: ACAGAATGGAACTGTGGTCCAGTATCTTCCTACTTT...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR TCA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGACATTCTTCAACGTTaGTTCAGTCAAAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLDILQR*FSQSVY
Trigger: GTAAACACTTTGACTGAATCAACGTTGAAGAATGTC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CCA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAATTAGAAGACGGTGTTaGTGTGATTATCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIIRRRC*CDYPKI
Trigger: AATTTTGGGATAATCACACCAACACCGTCTTCTAAT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS GCA 90 bp TCGTCTCCCATCGCGCCGCCCTCAGTGTGTCGAAGCAGCCAACGCTaGCTCCCACGGCCTTGCCCACGGAACCCAGGCCGCTCGACAGCA +
Preference number: 5 (lower is better)
Translates to: SSPIAPPSVCRSSQR*LPRPCPRNPGRSTA
Trigger: TGCTGTCGAGCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAGCGTTGGCTGCTTCGACACACTGAGGGCGGCGCGATGGGAGACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS GCA 90 bp CCGCCCTCAGTGTGTCGAAGCAGCCAACGCTGCCTCCCACGGCCTTaGCCACGGAACCCAGGCCGCTCGACAGCAAACTTCCTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: PPSVCRSSQRCLPRP*PRNPGRSTANFLPS
Trigger: TGAGGGGAGGAAGTTTGCTGTCGAGCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAGCGTTGGCTGCTTCGACACACTGAGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS GCA 90 bp GGCTCATGGCCAGGGACCCGAATCCTCCTGCGCTGGCAGCTGCAGTaGCCTCTCCGAACACTTTGCCTCCCGTCGAGCCCAGAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GSWPGTRILLRWQLQ*PLRTLCLPSSPEGL
Trigger: CAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTCCCTGGCCATGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS CCA 90 bp GGGTCGGAGACAGGCTCATGGCCAGGGACCCGAATCCTCCTGCGCTaGCAGCTGCAGTGCCCTCTCCGAACACTTTGCCTCCCGTCGAGC +
Preference number: 5 (lower is better)
Translates to: GSETGSWPGTRILLR*QLQCPLRTLCLPSS
Trigger: GCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTCCCTGGCCATGAGCCTGTCTCCGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS GCA 90 bp AGACAGGCTCATGGCCAGGGACCCGAATCCTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACACTTTGCCTCCCGTCGAGCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RQAHGQGPESSCAGS*SALSEHFASRRAQR
Trigger: CCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTCCCTGGCCATGAGCCTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS TCA 90 bp CAGTCAAAGTGTTTACAGCTGGTGCCTGACTGGCCATCTGCCGCCTaGGTGCTGCTGCGGCAGCTGCCTGCGGGGCTGAGATGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: QSKCLQLVPDWPSAA*VLLRQLPAGLRWGG
Trigger: CCCACCCCATCTCAGCCCCGCAGGCAGCTGCCGCAGCAGCACTCAGGCGGCAGATGGCCAGTCAGGCACCAGCTGTAAACACTTTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000526346.5
ENST00000652454.1
CDS GCA 90 bp TGCTGCTGCTCCCAAACCCGAATCCTCCTGCGCTGGCAGCTGCAGTaGCCTCTCCGAACACTTTGCCTCCCGTCGAGCCCAGAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: CCCSQTRILLRWQLQ*PLRTLCLPSSPEGL
Trigger: CAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp GGTGTTGCTGCTGCTCCCAAACCCGAATCCTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACACTTTGCCTCCCGTCGAGCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: GVAAAPKPESSCAGS*SALSEHFASRRAQR
Trigger: CCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCAACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000650694.1
ENST00000652454.1
CDS CCA 90 bp TGGCTGTGCTACCAGTCTGCTGCCCAAACAGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACACGGGCGTGGCAGAGGGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: WLCYQSAAQTDLVRC*LPLAQTRAWQRGQW
Trigger: CCACTGCCCCCTCTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATCTGCCTCCCACGGCCTaGCCCACGGAACCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: VASSASTQSQSASLDGPDLPPTA*PTEPRP
Trigger: CGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAG...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCTGCCTCCCACGGCCTaGCCCACGGAACCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERLPPTA*PTEPRP
Trigger: CGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS GCA 90 bp CCAGTCTGCTGCCCAAACAGACTTGGTGCGGTGCTGGCTGCCACTTaGCCAAACACGGGCGTGGCAGAGGGGGCAGTGGCTGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PVCCPNRLGAVLAAT*PNTGVAEGAVAVLL
Trigger: CAACAACACAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGCAGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp TGTGCTACCAGTCTGCTGCCCAAACAGACTTGGTGCGGTGCTGGCTaGCACTTGCCCAAACACGGGCGTGGCAGAGGGGGCAGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: CATSLLPKQTWCGAG*HLPKHGRGRGGSGC
Trigger: ACAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGGTGCTGGCTGCCACTaGCCCAAACACGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACGAGCH*PKHGRG
Trigger: GCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 90 bp GGCTGGATGGAAGGAGTGCGAACCACGGGGGCGTGCCGAGGGGCCTaGACCACTGCCTCGTCATCTTTACAGGACGTCCGTGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: GWMEGVRTTGACRGA*TTASSSLQDVRASS
Trigger: TGAAGATGCACGGACGTCCTGTAAAGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGCCCCCGTGGTTCGCACTCCTTCCATCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS GCA 90 bp GGAAGGAGTGCGAACCACGGGGGCGTGCCGAGGGGCCTGAACCACTaGCTCGTCATCTTTACAGGACGTCCGTGCATCTTCACTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GRSANHGGVPRGLNH*LVIFTGRPCIFTLQ
Trigger: CTGGAGAGTGAAGATGCACGGACGTCCTGTAAAGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGCCCCCGTGGTTCGCACTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS CCA 90 bp CTGCTGCCTCTGCAGATGGGCCGGGAGCAACAATGGACGTGGTGCTaGAGGCTATGGGGGTACTTGATGTTTCGACGGCCACAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LLPLQMGREQQWTWC*RLWGYLMFRRPQGL
Trigger: CAGGCCCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCCCATCTGCAGAGGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTGCTGCAGTGCCAGAGTaGCTGACTGCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PADTPSASPATKTLDRRVAAVPE*LTAGWA
Trigger: TGCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGC...AACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCGGTGCTGGCTGCCACTaGCCCAAACACGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: PPAFNLFPMWRALGPSETGAGCH*PKHGRG
Trigger: GCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACC...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGGTGCTGGCTGCCACTaGCCCAAACACGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVGAGCH*PKHGRG
Trigger: GCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 90 bp GAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTaGCACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACC +
Preference number: 5 (lower is better)
Translates to: EEAEDAVGPRDRKAC*HALSFASHQNPGQT
Trigger: GGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476004.5
CDS TCA 90 bp GCTGCCCTCAGGCCCAGCTCACTGGCAGGCGTGCTCTTTTCTCTTTaGACCACGCCTCTTAAGAAGGCGAGGCCTGGCACCTCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: AALRPSSLAGVLFSL*TTPLKKARPGTSCH
Trigger: ATGGCAGGAGGTGCCAGGCCTCGCCTTCTTAAGAGGCGTGGTTCAAAGAGAAAAGAGCACGCCTGCCAGTGAGCTGGGCCTGAGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS GCA 90 bp ATGCTGCTGCCTCTGCAGATGGGCCGGGAGCAACAATGGACGTGGTaGTGGAGGCTATGGGGGTACTTGATGTTTCGACGGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: MLLPLQMGREQQWTW*WRLWGYLMFRRPQG
Trigger: GCCCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS GCA 90 bp GTCTCCCGTGAAACAGGAGAAGCAGCACGCCAACCCTCTCACTCCTaGTGCTGCGCTCCAGCATCTTGCACGGAGGGGAAGGGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: VSRETGEAARQPSHS*CCAPASCTEGKGVS
Trigger: ACTCACACCCTTCCCCTCCGTGCAAGATGCTGGAGCGCAGCAGCAGGAGTGAGAGGGTTGGCGTGCTGCTTCTCCTGTTTCACGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CCA 90 bp ATCCGAAAGTGGGGGCATTCTGACTCGCGAGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAAACCCGAATCCTCCTGCGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: IRKWGHSDSRACRRM*CCCCSQTRILLRWQ
Trigger: CTGCCAGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCAGGCTGAAGTGACTTaGCCTGGGGAGAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GKKLRMRLVPGIERPADTQAEVT*PGESLA
Trigger: AGCCAGGCTCTCCCCAGGCAAAGTCACTTCAGCCTG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCAGAAGCTCTCCCAGCTaGGACGGTGGGGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: KKLRMRLVPGIERPADTPRSSPS*DGGVSS
Trigger: GCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGCTACTGAGGTGGTGGTaGCAGAGGATGTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: GIERPADTPSASPATKTLLLRWW*QRMSQG
Trigger: CCCCTGTGACATCCTCTGCAACCACCACCTCAGTAG...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp TGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAACAGAGTCAGAAGTTaGCGGAGGAGCCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: WSQGSKGLLTRPQLRQPPNRVRS*RRSLGK
Trigger: CTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGTT...TGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGCTGCAGTGCCAGAGTaGCTGACTGCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAAAVPE*LTAGWA
Trigger: TGCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCAGGCCTGCCCGAAGGTaGTCTGTCCAAAGACCCCTG +
Preference number: 5 (lower is better)
Translates to: KKLRMRLVPGIERPADTPRPARR*SVQRPL
Trigger: CAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAPSPNT*PPVEPR
Trigger: TCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp AAGACACTTGCAGCACTGCTCGCCGACTGCCCAAAGACTGAGGCCTaGCCGAAGGTTGTCTGTCCAAAGACCCCTGGGGCTGTGGTACCA +
Preference number: 5 (lower is better)
Translates to: KTLAALLADCPKTEA*PKVVCPKTPGAVVP
Trigger: TGGTACCACAGCCCCAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp TCCCGTGAAACAGGAGAAGCAGCACGCCAACCCTCTCACTCCTGCTaGTGCGCTCCAGCATCTTGCACGGAGGGGAAGGGTGTGAGTAAG +
Preference number: 5 (lower is better)
Translates to: SRETGEAARQPSHSC*CAPASCTEGKGVSK
Trigger: CTTACTCACACCCTTCCCCTCCGTGCAAGATGCTGGAGCGCAGCAGCAGGAGTGAGAGGGTTGGCGTGCTGCTTCTCCTGTTTCACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS GCA 90 bp GTTGGGACAGTGATCCGAAAGTGGGGGCATTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGCTGCTGCTCCCAAACCTGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: VGTVIRKWGHSDSRA*RRMWCCCCSQTCAP
Trigger: TGGAGCGCAGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CCA 90 bp CTGCAGATGGGCCGGGAGCAACAATGGACGTGGTGCTGGAGGCTATaGGGGTACTTGATGTTTCGACGGCCACAGGGCCTGCACTTGAGA +
Preference number: 5 (lower is better)
Translates to: LQMGREQQWTWCWRL*GYLMFRRPQGLHLR
Trigger: TCTCAAGTGCAGGCCCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCCCATCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACTGCCTCCCACGGCCTaGCCCACGGAACCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRLPPTA*PTEPRP
Trigger: CGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAG...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGAACAAAAGAGAAGGTaGATGGGCCAGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGEQKRR*MGQGLG
Trigger: CCCCAGGCCCTGGCCCATCAACCTTCTCTTTTGTTC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCAGAAGCAGCTGGCTaGGAGGCAGAAGAGAATGGC +
Preference number: 5 (lower is better)
Translates to: GKKLRMRLVPGIERPADTPEAAG*EAEENG
Trigger: GCCATTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCCAGGCTGAAGTGACTTaGCCTGGGGAGAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACQAEVT*PGESLA
Trigger: AGCCAGGCTCTCCCCAGGCAAAGTCACTTCAGCCTG...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAGACCCCTGCTTGGCTaGGTTAGCAGCCACTGGGGT +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRRPLLG*VSSHWG
Trigger: ACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTCT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAATTAGAGACCCCTGCTaGGCTTGGTTAGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: WSQGSKGLLTRPQLRQPPIRDPC*AWLAAT
Trigger: AGTGGCTGCTAACCAAGCCAAGCAGGGGTCTCTAAT...TGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAGAAGCTCTCCCAGCTaGGACGGTGGGGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKARSSPS*DGGVSS
Trigger: GCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGAGGCACGCCTGACGTCTaGGTTGGCTGGGTACTAGTT +
Preference number: 5 (lower is better)
Translates to: ERPADTPSASPATKTLDRGTPDV*VGWVLV
Trigger: AACTAGTACCCAGCCAACCAAGACGTCAGGCGTGCC...TCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGGCACGCCTGACGTCTaGGTTGGCTGGGTACTAGTT +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGGTPDV*VGWVLV
Trigger: AACTAGTACCCAGCCAACCAAGACGTCAGGCGTGCC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGCTGCAGTGCCAGAGTaGCTGACTGCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEAAVPE*LTAGWA
Trigger: TGCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGAGGCTATGGGGGTACTaGATGTTTCGACGGCCACAG +
Preference number: 5 (lower is better)
Translates to: GIERPADTPSASPATKTLRLWGY*MFRRPQ
Trigger: CTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCT...CAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGGTGCTGGCTGCCACTaGCCCAAACACGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGGAGCH*PKHGRG
Trigger: GCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGCTGCCCAAACAGACTaGGTGCGGTGCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVAAQTD*VRCWLP
Trigger: TGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGCTGCCCAAACAGACTaGGTGCGGTGCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVAAQTD*VRCWLP
Trigger: TGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAGGCCTGCCCGAAGGTaGTCTGTCCAAAGACCCCTG +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDARPARR*SVQRPL
Trigger: CAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCCCAAAAGCAGGAGCGTaGCTTTGGCCAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: KKLRMRLVPGIERPADTPPKAGA*LWPNSP
Trigger: GGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTGG...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: EALLASQSHRNGAIFLAVPSPNT*PPVEPR
Trigger: TCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGG...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVPSPNT*PPVEPR
Trigger: TCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEPSPNT*PPVEPR
Trigger: TCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAPKDVV*LLLPNP
Trigger: CGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 5 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CAA 90 bp CCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 5 (lower is better)
Translates to: PADTPSASPATKTLDRRVKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...AACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS GCA 90 bp CTCCGTCCTGGCATCAGGGACCCCCGTGGTGGCTGGGGTAGCCTCTaGAGAAAGTGCTACAAGACTAGTACTAGATGCTGCAGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: LRPGIRDPRGGWGSL*RKCYKTSTRCCSAR
Trigger: TCTGGCACTGCAGCATCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTCCCTGATGCCAGGACGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS GCA 90 bp GTTGGGACAGTGATCCGAAAGTGGGGGCATTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGCTGCTGCTCCCAAACCCGAATCCTC +
Preference number: 5 (lower is better)
Translates to: VGTVIRKWGHSDSRA*RRMWCCCCSQTRIL
Trigger: GAGGATTCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp CGTGAAACAGGAGAAGCAGCACGCCAACCCTCTCACTCCTGCTGCTaGGCTCCAGCATCTTGCACGGAGGGGAAGGGTGTGAGTAAGAAC +
Preference number: 5 (lower is better)
Translates to: RETGEAARQPSHSCC*APASCTEGKGVSKN
Trigger: GTTCTTACTCACACCCTTCCCCTCCGTGCAAGATGCTGGAGCGCAGCAGCAGGAGTGAGAGGGTTGGCGTGCTGCTTCTCCTGTTTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS GCA 90 bp CACGCATCCACTCGAAAGACAAAGGTGGTCCCCATGCTAAGTGTCTaGCCTCCTCTGTGCTTCTTGTGGGAAGCCCTCCGTGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: HASTRKTKVVPMLSV*PPLCFLWEALRAST
Trigger: GGTGGAGGCACGGAGGGCTTCCCACAAGAAGCACAGAGGAGGGCAGACACTTAGCATGGGGACCACCTTTGTCTTTCGAGTGGATGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS CCA 90 bp AGGTGGTACTGCCTCCGTCCTGGCATCAGGGACCCCCGTGGTGGCTaGGGTAGCCTCTGCAGAAAGTGCTACAAGACTAGTACTAGATGC +
Preference number: 5 (lower is better)
Translates to: RWYCLRPGIRDPRGG*GSLCRKCYKTSTRC
Trigger: GCATCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTCCCTGATGCCAGGACGGAGGCAGTACCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp CAAATGCTGCTGCCTCTGCAGATGGGCCGGGAGCAACAATGGACGTaGTGCTGGAGGCTATGGGGGTACTTGATGTTTCGACGGCCACAG +
Preference number: 5 (lower is better)
Translates to: QMLLPLQMGREQQWT*CWRLWGYLMFRRPQ
Trigger: CTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp CGGTACCAAATGCTGCTGCCTCTGCAGATGGGCCGGGAGCAACAATaGACGTGGTGCTGGAGGCTATGGGGGTACTTGATGTTTCGACGG +
Preference number: 5 (lower is better)
Translates to: RYQMLLPLQMGREQQ*TWCWRLWGYLMFRR
Trigger: CCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCCCATCTGCAGAGGCAGCAGCATTTGGTACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp GTCAGGAGCAGCATCTCCTCAGCGCTGCCCTCAGGCCCAGCTCACTaGCAGGCGTGCTCTTTTCTCTTTGAACCACGCCTCTTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: VRSSISSALPSGPAH*QACSFLFEPRLLRR
Trigger: CCTTCTTAAGAGGCGTGGTTCAAAGAGAAAAGAGCACGCCTGCCAGTGAGCTGGGCCTGAGGGCAGCGCTGAGGAGATGCTGCTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS-3UTR CAA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCGCCAGCTGCTTTCCTTaGGGGCTCCAGCACACAGAG +
Preference number: 5 (lower is better)
Translates to: PPAFNLFPMWRALGPSETASCFP*GLQHTE
Trigger: CTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGGC...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGTACTTCCTGGTGACTaGGGCTGTCGCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KKLRMRLVPGIERPADTPVLPGD*GCRSPS
Trigger: AGAAGGAGAGCGACAGCCCAAGTCACCAGGAAGTAC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTTGAGGGCACTGGGCTaGAACTGCCCTGAGCAGATC +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPALRALG*NCPEQI
Trigger: GATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTCAGGCTGAAGTGACTTaGCCTGGGGAGAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTQAEVT*PGESLA
Trigger: AGCCAGGCTCTCCCCAGGCAAAGTCACTTCAGCCTG...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTAGACCCCTGCTTGGCTaGGTTAGCAGCCACTGGGGT +
Preference number: 5 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTRPLLG*VSSHWG
Trigger: ACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTCT...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGAGAAGCTCTCCCAGCTaGGACGGTGGGGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAERSSPS*DGGVSS
Trigger: GCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAGAAGCTCTCCCAGCTaGGACGGTGGGGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVRSSPS*DGGVSS
Trigger: GCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGGCACGCCTGACGTCTaGGTTGGCTGGGTACTAGTT +
Preference number: 5 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIGTPDV*VGWVLV
Trigger: AACTAGTACCCAGCCAACCAAGACGTCAGGCGTGCC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGGCACGCCTGACGTCTaGGTTGGCTGGGTACTAGTT +
Preference number: 5 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACGTPDV*VGWVLV
Trigger: AACTAGTACCCAGCCAACCAAGACGTCAGGCGTGCC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGCTACTGAGGTGGTGGTaGCAGAGGATGTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRLLRWW*QRMSQG
Trigger: CCCCTGTGACATCCTCTGCAACCACCACCTCAGTAG...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTGCCAAAAACGGCAGTaGAGGAAGTGCTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGCQKRQ*RKCWWL
Trigger: CAGCCACCAGCACTTCCTCAACTGCCGTTTTTGGCA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGATGTGGGGAATGATGTaGGAAGGGGAGTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GKKLRMRLVPGIERPADTMWGMM*EGEWQL
Trigger: CAGCTGCCACTCCCCTTCCAACATCATTCCCCACAT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATGTGGGGAATGATGTaGGAAGGGGAGTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGMWGMM*EGEWQL
Trigger: CAGCTGCCACTCCCCTTCCAACATCATTCCCCACAT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGTGCTGGCTGCCACTaGCCCAAACACGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGAGCH*PKHGRG
Trigger: GCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGCTGCCCAAACAGACTaGGTGCGGTGCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGAAQTD*VRCWLP
Trigger: TGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCTGCCCAAACAGACTaGGTGCGGTGCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDAAQTD*VRCWLP
Trigger: TGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTGGAGCTACTGGTACTaGAGGCGGCACCAAAGACAC +
Preference number: 5 (lower is better)
Translates to: KKLRMRLVPGIERPADTPWSYWY*RRHQRH
Trigger: GTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCA...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTGGAGCTACTGGTACTaGAGGCGGCACCAAAGACAC +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGWSYWY*RRHQRH
Trigger: GTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCATGGAGCTACTGGTACTaGAGGCGGCACCAAAGACAC +
Preference number: 5 (lower is better)
Translates to: KLRMRLVPGIERPADTPSWSYWY*RRHQRH
Trigger: GTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCA...TGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CAA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCCCAAAAGCAGGAGCGTaGCTTTGGCCAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIPKAGA*LWPNSP
Trigger: GGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTGG...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCCAAAAGCAGGAGCGTaGCTTTGGCCAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAPKAGA*LWPNSP
Trigger: GGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTGG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVPKDVV*LLLPNP
Trigger: CGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTTCCTCCTCTGTGCTTCTaGTGGGAAGCCCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: LTRPQLRQPPKPWTDELFPPLCF*WEALRA
Trigger: GGCACGGAGGGCTTCCCACAAGAAGCACAGAGGAGG...AAATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS GCA 90 bp GGCATCAGGGACCCCCGTGGTGGCTGGGGTAGCCTCTGCAGAAAGTaGTACAAGACTAGTACTAGATGCTGCAGTGCCAGAGTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: GIRDPRGGWGSLCRK*YKTSTRCCSARVAD
Trigger: GTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTCCCTGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp ACTTTGCCTGGGGAGAGCCTGGCTTTGCCGCTGGAGGGGTTATCCTaGGTGATTTCTGTACCATTGAGGGCACTGGGCTTGAACTGCCCT +
Preference number: 5 (lower is better)
Translates to: TLPGESLALPLEGLS*VISVPLRALGLNCP
Trigger: AGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCACCCAGGATAACCCCTCCAGCGGCAAAGCCAGGCTCTCCCCAGGCAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000651022.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGAGACTCGAGCGTTCCTaGGGCAATTCCTCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: EALLASQSHRNGAIFLAVRLERS*GNSSGE
Trigger: CTCCCCTGAGGAATTGCCCAAGGAACGCTCGAGTCT...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAGACTCGAGCGTTCCTaGGGCAATTCCTCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERRLERS*GNSSGE
Trigger: CTCCCCTGAGGAATTGCCCAAGGAACGCTCGAGTCT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCCAGTTTCTGTGGGGCTaGAGAGGAGGTTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACQFLWG*RGGWGS
Trigger: ACTACCCCAACCTCCTCTCAAGCCCCACAGAAACTG...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTGAACAAAAGAGAAGGTaGATGGGCCAGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTEQKRR*MGQGLG
Trigger: CCCCAGGCCCTGGCCCATCAACCTTCTCTTTTGTTC...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCAGAAGCAGCTGGCTaGGAGGCAGAAGAGAATGGC +
Preference number: 5 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERPEAAG*EAEENG
Trigger: GCCATTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTTGAGGGCACTGGGCTaGAACTGCCCTGAGCAGATC +
Preference number: 5 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVLRALG*NCPEQI
Trigger: GATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAA...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAGAAAATGAGAAAGGCTaGCTGAACTGCCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: WSQGSKGLLTRPQLRQPPENEKG*LNCPEA
Trigger: TGCTTCTGGGCAGTTCAGCAAGCCTTTCTCATTTTC...TGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTGCCAAAAACGGCAGTaGAGGAAGTGCTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRCQKRQ*RKCWWL
Trigger: CAGCCACCAGCACTTCCTCAACTGCCGTTTTTGGCA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTGCCAAAAACGGCAGTaGAGGAAGTGCTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPACQKRQ*RKCWWL
Trigger: CAGCCACCAGCACTTCCTCAACTGCCGTTTTTGGCA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGATGTGGGGAATGATGTaGGAAGGGGAGTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAMWGMM*EGEWQL
Trigger: CAGCTGCCACTCCCCTTCCAACATCATTCCCCACAT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAACAGAGTCAGAAGTTaGCGGAGGAGCCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACNRVRS*RRSLGK
Trigger: CTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGTT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCAGGCTATGGGGGTACTaGATGTTTCGACGGCCACAG +
Preference number: 5 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACRLWGY*MFRRPQ
Trigger: CTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCT...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGCAGTGGCTGTGTTGTaGGTGAGCTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDAVAVL*VSWLKA
Trigger: AGCTTTCAACCAGCTCACCAACAACACAGCCACTGC...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CAA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCGGGGCAGTGGCTGTGTaGTTGGTGAGCTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVGAVAV*LVSWLK
Trigger: TTTCAACCAGCTCACCAACAACACAGCCACTGCCCC...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGGGGCAGTGGCTGTGTaGTTGGTGAGCTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAGAVAV*LVSWLK
Trigger: TTTCAACCAGCTCACCAACAACACAGCCACTGCCCC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTAGGCCTGCCCGAAGGTaGTCTGTCCAAAGACCCCTG +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGRPARR*SVQRPL
Trigger: CAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCT...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTTGGAGCTACTGGTACTaGAGGCGGCACCAAAGACAC +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAWSYWY*RRHQRH
Trigger: GTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCA...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGCCAAAAGCAGGAGCGTaGCTTTGGCCAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEPKAGA*LWPNSP
Trigger: GGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTGG...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 90 bp AAACCAGAAGTCTGTTGGGACAGTGATCCGAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAGGATGTGGTGTTGCTGCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: KPEVCWDSDPKVGAF*LASVPKDVVLLLLP
Trigger: TGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAACAGACTTCTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS TCA 90 bp GAATCCGCTACTCTGGGTCCCAAAACCAGAAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATTCTGACTCGCGAGCGTGCCGAAGGA +
Preference number: 5 (lower is better)
Translates to: ESATLGPKTRSLLGQ*SESGGILTRERAEG
Trigger: TCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp GAGTCAGAAGTTTGCGGAGGAGCCTGGGGAAGCTGGGCTGACTGTTaGTCCTCTAGAAGTGAGGCTGCTGATGCTGAGACCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: ESEVCGGAWGSWADC*SSRSEAADAETSLS
Trigger: TGACAGTGAGGTCTCAGCATCAGCAGCCTCACTTCTAGAGGAGCAACAGTCAGCCCAGCTTCCCCAGGCTCCTCCGCAAACTTCTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp TCTGGGTCCCAAAACCAGAAGTCTGTTGGGACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGAGCGTGCCGAAGGATGTGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: SGSQNQKSVGTVIRK*GHSDSRACRRMWCC
Trigger: GCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAACAGACTTCTGGTTTTGGGACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGGTACTTCCTGGTGACTaGGGCTGTCGCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: EALLASQSHRNGAIFLAVVLPGD*GCRSPS
Trigger: AGAAGGAGAGCGACAGCCCAAGTCACCAGGAAGTAC...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGAGCAGACACACTaGGCACTGGTGTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRLEQTH*ALVCFP
Trigger: TGGAAAGCACACCAGTGCCAAGTGTGTCTGCTCCAA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGGTGATTTCTGTACCATaGAGGGCACTGGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGVISVP*RALGLN
Trigger: GTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCAC...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTCATGGGGGACAGTTaGGCTGGTACTTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRFMGDS*AGTLGK
Trigger: CTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGAA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCATTAGAGACCCCTGCTaGGCTTGGTTAGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAIRDPC*AWLAAT
Trigger: AGTGGCTGCTAACCAAGCCAAGCAGGGGTCTCTAAT...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCGGAGGGTGTTGCCCCTaGTGCAGCAGTGAAATTAGA +
Preference number: 5 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACGGCCP*CSSEIR
Trigger: TCTAATTTCACTGCTGCACAAGGGGCAACACCCTCC...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGAGGGTGTTGCCCCTaGTGCAGCAGTGAAATTAGA +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAGGCCP*CSSEIR
Trigger: TCTAATTTCACTGCTGCACAAGGGGCAACACCCTCC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGGAGGGTGTTGCCCCTaGTGCAGCAGTGAAATTAGA +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAGGCCP*CSSEIR
Trigger: TCTAATTTCACTGCTGCACAAGGGGCAACACCCTCC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCTACTGAGGTGGTGGTaGCAGAGGATGTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLLRWW*QRMSQG
Trigger: CCCCTGTGACATCCTCTGCAACCACCACCTCAGTAG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCAACAGAGTCAGAAGTTaGCGGAGGAGCCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVNRVRS*RRSLGK
Trigger: CTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGTT...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGCTGCAGTGCCAGAGTaGCTGACTGCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQAAVPE*LTAGWA
Trigger: TGCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGCAGTGGCTGTGTTGTaGGTGAGCTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRAVAVL*VSWLKA
Trigger: AGCTTTCAACCAGCTCACCAACAACACAGCCACTGC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGGGGCAGTGGCTGTGTaGTTGGTGAGCTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEGAVAV*LVSWLK
Trigger: TTTCAACCAGCTCACCAACAACACAGCCACTGCCCC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGGTGCTGGCTGCCACTaGCCCAAACACGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLGAGCH*PKHGRG
Trigger: GCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATTGGAGCTACTGGTACTaGAGGCGGCACCAAAGACAC +
Preference number: 5 (lower is better)
Translates to: VASSASTQSQSASLDGPDWSYWY*RRHQRH
Trigger: GTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCA...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATGGAAAACCCAAAGCCTaGGGATGCCACACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VASSASTQSQSASLDGPDGKPKA*GCHTSS
Trigger: GGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCC...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGCCGAAGCCACCTGTTTaGTTTGGAGAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGPKPPV*FGEENP
Trigger: TGGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGG...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQPSPNT*PPVEPR
Trigger: TCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGCCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGPKDVV*LLLPNP
Trigger: CGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 5 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTCGCAGAGTGCGTCCTaGGATGGTCCTGATACACAA +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRSQSAS*DGPDTQ
Trigger: TTGTGTATCAGGACCATCCAAGGACGCACTCTGCGA...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAGGGATCTGCTCTCATaGGACTTTCTCCCAGGAGCG +
Preference number: 5 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERRDLLS*DFLPGA
Trigger: CGCTCCTGGGAGAAAGTCCAATGAGAGCAGATCCCT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCCCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACTTT +
Preference number: 5 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIPKDVV*LLLPNF
Trigger: AAAGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS TCA 90 bp ATGGGAGTGACAAGCCGCCTAGAAGCCAAGGGAGCGGAGCGACAGTaGCAGCAACAGGTACTTTCTCTGATTTTCACGCACCTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: MGVTSRLEAKGAERQ*QQQVLSLIFTHLAG
Trigger: CCCAGCAAGGTGCGTGAAAATCAGAGAAAGTACCTGTTGCTGTCACTGTCGCTCCGCTCCCTTGGCTTCTAGGCGGCTTGTCACTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS GCA 90 bp GGCTGGGGTAGCCTCTGCAGAAAGTGCTACAAGACTAGTACTAGATaGTGCAGTGCCAGAGTTGCTGACTGCAGGCTGGGCAAGAACAGG +
Preference number: 5 (lower is better)
Translates to: GWGSLCRKCYKTSTR*CSARVADCRLGKNR
Trigger: CCTGTTCTTGCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCTACCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp GCCTCATCAGCAACAGCCTGCCCTTCAGGGTCGGAGACAGGCTCATaGCCAGGGACCTGGAAGAAGGTAATGGGCTCTTATGGAGATTTA +
Preference number: 5 (lower is better)
Translates to: ASSATACPSGSETGS*PGTWKKVMGSYGDL
Trigger: TAAATCTCCATAAGAGCCCATTACCTTCTTCCAGGTCCCTGGCCATGAGCCTGTCTCCGACCCTGAAGGGCAGGCTGTTGCTGATGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTCACTGTTTCCGTGACTaGCAGGACAGCAATACTACC +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAHCFRD*QDSNTT
Trigger: GGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTG...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGCCAGCTGCTTTCCTTaGGGGCTCCAGCACACAGAG +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFASCFP*GLQHTE
Trigger: CTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGGC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCAGTTTCTGTGGGGCTaGAGAGGAGGTTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGQFLWG*RGGWGS
Trigger: ACTACCCCAACCTCCTCTCAAGCCCCACAGAAACTG...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCAGTTTCTGTGGGGCTaGAGAGGAGGTTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDQFLWG*RGGWGS
Trigger: ACTACCCCAACCTCCTCTCAAGCCCCACAGAAACTG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTTGGAGCAGACACACTaGGCACTGGTGTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVLEQTH*ALVCFP
Trigger: TGGAAAGCACACCAGTGCCAAGTGTGTCTGCTCCAA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCCAGAAGCAGCTGGCTaGGAGGCAGAAGAGAATGGC +
Preference number: 5 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKPEAAG*EAEENG
Trigger: GCCATTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTTGAGGGCACTGGGCTaGAACTGCCCTGAGCAGATC +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGLRALG*NCPEQI
Trigger: GATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCAGGCTGAAGTGACTTaGCCTGGGGAGAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQQAEVT*PGESLA
Trigger: AGCCAGGCTCTCCCCAGGCAAAGTCACTTCAGCCTG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCTCAGAAGTGCCCACTaGGAAACAGGCTTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKALRSAH*ETGFGS
Trigger: ACTTCCAAAGCCTGTTTCCAAGTGGGCACTTCTGAG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGTTCATGGGGGACAGTTaGGCTGGTACTTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEFMGDS*AGTLGK
Trigger: CTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGAA...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCGGTGGGGTCTTCCTCTaGGCCAAGAAGTTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: PPAFNLFPMWRALGPSETGGVFL*AKKFLS
Trigger: ACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACC...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTTTTTCGTGGCAAGCATaGTGCTATCGGCCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVFSWQA*CYRPLE
Trigger: CTCAAGGGGCCGATAGCACAATGCTTGCCACGAAAA...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCAGACCCCTGCTTGGCTaGGTTAGCAGCCACTGGGGT +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFRPLLG*VSSHWG
Trigger: ACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTCT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCACAGCTGTTTCTATCTaGGCTGTCCCTGAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: KKLRMRLVPGIERPADTPTAVSI*AVPEAL
Trigger: CAAAGCTTCAGGGACAGCCAAGATAGAAACAGCTGT...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGACAGCTGTTTCTATCTaGGCTGTCCCTGAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGTAVSI*AVPEAL
Trigger: CAAAGCTTCAGGGACAGCCAAGATAGAAACAGCTGT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCAGAAGCAGATGGGGTaGAAGTCACAGCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: GKKLRMRLVPGIERPADTQKQMG*KSQLFL
Trigger: TAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGCCCGAAAATGAGAAAGGCTaGCTGAACTGCCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: KKLRMRLVPGIERPADTPENEKG*LNCPEA
Trigger: TGCTTCTGGGCAGTTCAGCAAGCCTTTCTCATTTTC...GGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGGGGGCACTGTGCTATaGGTCTGTTGGCTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEGGTVL*VCWLPN
Trigger: ATTTGGAAGCCAACAGACCAATAGCACAGTGCCCCC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGCTGCAGTGCCAGAGTaGCTGACTGCAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTAAVPE*LTAGWA
Trigger: TGCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGC...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTAGGCTATGGGGGTACTaGATGTTTCGACGGCCACAG +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGRLWGY*MFRRPQ
Trigger: CTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCT...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGTTGTTGGTGAGCTGGTaGAAAGCTGAGCTAGAACTG +
Preference number: 5 (lower is better)
Translates to: GKKLRMRLVPGIERPADTLLVSW*KAELEL
Trigger: CAGTTCTAGCTCAGCTTTCAACCAGCTCACCAACAA...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTTTGTTGGTGAGCTGGTaGAAAGCTGAGCTAGAACTG +
Preference number: 5 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCLLVSW*KAELEL
Trigger: CAGTTCTAGCTCAGCTTTCAACCAGCTCACCAACAA...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGGCAGTGGCTGTGTTGTaGGTGAGCTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERAVAVL*VSWLKA
Trigger: AGCTTTCAACCAGCTCACCAACAACACAGCCACTGC...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGGGCAGTGGCTGTGTaGTTGGTGAGCTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDGAVAV*LVSWLK
Trigger: TTTCAACCAGCTCACCAACAACACAGCCACTGCCCC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTTGGGGCAGTGGCTGTGTaGTTGGTGAGCTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LTRPQLRQPPKPWTDELFGAVAV*LVSWLK
Trigger: TTTCAACCAGCTCACCAACAACACAGCCACTGCCCC...AAATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCAGGCCTGCCCGAAGGTaGTCTGTCCAAAGACCCCTG +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFRPARR*SVQRPL
Trigger: CAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGAGGCCTGCCCGAAGGTaGTCTGTCCAAAGACCCCTG +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQRPARR*SVQRPL
Trigger: CAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTCCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTPKDVV*LLLPNP
Trigger: CGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS TCA 90 bp AGGAAAACCCAAAGCCTTGGGATGCCACACTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCTGCTCTCCAAACGACGAGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RKTQSLGMPHFLLQS*KCQWVSALQTTSWQ
Trigger: TTGCCAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000530491.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp GATGCCACACTTCCTCCTCCAGAGCTGAAAGTGCCAGTGGGTTTCTaGTCTCCAAACGACGAGCTGGCAAATCCACCAAATGTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: DATLPPPELKVPVGF*SPNDELANPPNVLA
Trigger: GGCCAAGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000530491.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp TTATCCTGGGTGATTTCTGTACCATTGAGGGCACTGGGCTTGAACTaGCCTGAGCAGATCGTCCTGCTGATGGTGAGGGCAAGACTGAGG +
Preference number: 5 (lower is better)
Translates to: LSWVISVPLRALGLN*PEQIVLLMVRARLR
Trigger: CCTCAGTCTTGCCCTCACCATCAGCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCACCCAGGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS GCA 90 bp GTTGGGACAGTGATCCGAAAGTGGGGGCATTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGCTGCTGCTCCCAAACTTTTAATGGT +
Preference number: 5 (lower is better)
Translates to: VGTVIRKWGHSDSRA*RRMWCCCCSQTFNG
Trigger: ACCATTAAAAGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS CCA 90 bp ACAGGCTGGCTGGAGCAGTGGATCTCACTGGTGGGGTCTTCCTCTTaGCCAAGAAGTTTCTCAGTTGTGCCTGTTTCATGGGGGACAGTT +
Preference number: 5 (lower is better)
Translates to: TGWLEQWISLVGSSS*PRSFSVVPVSWGTV
Trigger: AACTGTCCCCCATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGCCAGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS CCA 90 bp ATCCGAAAGTGGGGGCATTCTGACTCGCGAGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAAACTTTTAATGGTGAGGTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: IRKWGHSDSRACRRM*CCCCSQTFNGEVKA
Trigger: AGCCTTGACCTCACCATTAAAAGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp AGCCAAGGCCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTCCGTGGAAGGAAGAGTaGCACATACTTTCACTGTTT +
Preference number: 5 (lower is better)
Translates to: SQGRLRRSTVLPHAGYYCPWKEE*HILSLF
Trigger: AAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGG...ACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAGTCGCTCTGGTGTTTaGATGAGAGACTTAACCCCA +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPASRSGV*MRDLTP
Trigger: TGGGGTTAAGTCTCTCATCAAAACACCAGAGCGACT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGAACAAAAGAGAAGGTaGATGGGCCAGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHEQKRR*MGQGLG
Trigger: CCCCAGGCCCTGGCCCATCAACCTTCTCTTTTGTTC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGGAAGGAGGGCTTCATaGCTATATTTGGAGCAGACA +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRGRRAS*LYLEQT
Trigger: TGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTCC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGTGATTTCTGTACCATaGAGGGCACTGGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEVISVP*RALGLN
Trigger: GTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCAC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGACTTGGAAACAGGCTTaGGAAGTTCGGGCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGTWKQA*EVRAFN
Trigger: GTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAGT...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTCTCAGAAGTGCCCACTaGGAAACAGGCTTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTLRSAH*ETGFGS
Trigger: ACTTCCAAAGCCTGTTTCCAAGTGGGCACTTCTGAG...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGTTTTCGTGGCAAGCATaGTGCTATCGGCCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMFSWQA*CYRPLE
Trigger: CTCAAGGGGCCGATAGCACAATGCTTGCCACGAAAA...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTTTTCGTGGCAAGCATaGTGCTATCGGCCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGFSWQA*CYRPLE
Trigger: CTCAAGGGGCCGATAGCACAATGCTTGCCACGAAAA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGAGACCCCTGCTTGGCTaGGTTAGCAGCCACTGGGGT +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSRPLLG*VSSHWG
Trigger: ACCCCAGTGGCTGCTAACCAAGCCAAGCAGGGGTCT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCCAGAAGCAGATGGGGTaGAAGTCACAGCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAQKQMG*KSQLFL
Trigger: TAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCCAGAAGCAGATGGGGTaGAAGTCACAGCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIQKQMG*KSQLFL
Trigger: TAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGAGAAGCTCTCCCAGCTaGGACGGTGGGGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSRSSPS*DGGVSS
Trigger: GCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACCTACTGAGGTGGTGGTaGCAGAGGATGTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHLLRWW*QRMSQG
Trigger: CCCCTGTGACATCCTCTGCAACCACCACCTCAGTAG...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGAACAGAGTCAGAAGTTaGCGGAGGAGCCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKNRVRS*RRSLGK
Trigger: CTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGTT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGCAGTGGCTGTGTTGTaGGTGAGCTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGAVAVL*VSWLKA
Trigger: AGCTTTCAACCAGCTCACCAACAACACAGCCACTGC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCAGTGGCTGTGTTGTaGGTGAGCTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDAVAVL*VSWLKA
Trigger: AGCTTTCAACCAGCTCACCAACAACACAGCCACTGC...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGGGGCAGTGGCTGTGTaGTTGGTGAGCTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGGAVAV*LVSWLK
Trigger: TTTCAACCAGCTCACCAACAACACAGCCACTGCCCC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGTGGAGCTACTGGTACTaGAGGCGGCACCAAAGACAC +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGWSYWY*RRHQRH
Trigger: GTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCA...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGACCAGTACTGGCTGCTaGACCAAACACAGAACCAGT +
Preference number: 5 (lower is better)
Translates to: EALLASQSHRNGAIFLAVTSTGC*TKHRTS
Trigger: ACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGT...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACGAGTTATTACCAGTACTGGCTGCTaGACCAAACACAGAACCAGT +
Preference number: 5 (lower is better)
Translates to: ADTPSASPATKTLDRRVITSTGC*TKHRTS
Trigger: ACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGT...AATAACTCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CAA 90 bp AAAGGCCTGCTGACACGCCCTCAGCTTCGCCAGCCACCAAAACCCTGGACAGACAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: KGLLTRPQLRQPPKPWTDNPPNV*APLFPN
Trigger: ATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATT...GTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000650694.1
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGGAAAACCCAAAGCCTaGGGATGCCACACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGGKPKA*GCHTSS
Trigger: GGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGGAAAACCCAAAGCCTaGGGATGCCACACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKGKPKA*GCHTSS
Trigger: GGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSPKDVV*LLLPNP
Trigger: CGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS GCA 90 bp GGAAGATACTGGACCACAGTTCCATTCTGTTTTCCCACTGCCAGCTaGTTTCCTTTGGGGCTCCAGCACACAGAGGTTACTGCTACCGTG +
Preference number: 5 (lower is better)
Translates to: GRYWTTVPFCFPTAS*FPLGLQHTEVTATV
Trigger: CACGGTAGCAGTAACCTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGGCAGTGGGAAAACAGAATGGAACTGTGGTCCAGTATCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS GCA 90 bp TTCCTGAGGGAGGTGAGCTTTCAGGAATGGCCTCATAAGAAGGTTTaGTTCCCCCACCAGATGAGAATGCGTCCGGCTGGCTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: FLREVSFQEWPHKKV*FPHQMRMRPAGLTL
Trigger: AAGAGTCAAGCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGCAAACCTTCTTATGAGGCCATTCCTGAAAGCTCACCTCCCTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000531929.5
ENST00000651334.1
ENST00000652454.1
CDS GCA 90 bp TGGGGTAGCCTCTGCAGAAAGTGCTACAAGACTAGTACTAGATGCTaGAGTGCCAGAGTTGCTGACTGCAGGCTGGGCAAGAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: WGSLCRKCYKTSTRC*SARVADCRLGKNRF
Trigger: GAACCTGTTCTTGCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCTACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp CAGGCCCAGTTACTGGTTCTCTTTACCTGGAGCAGTGGATCTCACTaGTGGGGTCTTCCTCTTGGCCAAGAAGTTTCTCAGTTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: QAQLLVLFTWSSGSH*WGLPLGQEVSQLCL
Trigger: CAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGAACCAGTAACTGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CCA 90 bp ACACACACCCCACCACACCCTATCACTATGTACAGGCCCAGTTACTaGTTCTCTTTACCTGGAGCAGTGGATCTCACTGGTGGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: THTPPHPITMYRPSY*FSLPGAVDLTGGVF
Trigger: GAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGAACCAGTAACTGGGCCTGTACATAGTGATAGGGTGTGGTGGGGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CCA 90 bp CCACCACCTCCTGTGCCTGATCCAAAACCAGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTCTGTTGGGACAGTGATCCGAAAGTG +
Preference number: 5 (lower is better)
Translates to: PPPPVPDPKPENPLL*VPKPEVCWDSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTCTGGTTTTGGATCAGGCACAGGAGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGCCGTGGAAGGAAGAGTaGCACATACTTTCACTGTTT +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAPWKEE*HILSLF
Trigger: AAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGG...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGCCAGCTGCTTTCCTTaGGGGCTCCAGCACACAGAG +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLASCFP*GLQHTE
Trigger: CTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGGC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAAGGAGTCATCACTCTaGTCTGTCACAGGCAATTCA +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAKESSL*SVTGNS
Trigger: TGAATTGCCTGTGACAGACAAGAGTGATGACTCCTT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGAGTCGCTCTGGTGTTTaGATGAGAGACTTAACCCCA +
Preference number: 5 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERSRSGV*MRDLTP
Trigger: TGGGGTTAAGTCTCTCATCAAAACACCAGAGCGACT...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCGCTTCATTGCTATATTaGGAGCAGACACACTTGGCA +
Preference number: 5 (lower is better)
Translates to: AFLGEEAEDAVGPRDRKAASLLY*EQTHLA
Trigger: TGCCAAGTGTGTCTGCTCCAAATATAGCAATGAAGC...GGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATGGAAGGAGGGCTTCATaGCTATATTTGGAGCAGACA +
Preference number: 5 (lower is better)
Translates to: VASSASTQSQSASLDGPDGRRAS*LYLEQT
Trigger: TGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTCC...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGGTGATTTCTGTACCATaGAGGGCACTGGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMVISVP*RALGLN
Trigger: GTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCAC...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTACTTGGAAACAGGCTTaGGAAGTTCGGGCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPATWKQA*EVRAFN
Trigger: GTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAGT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCTCAGAAGTGCCCACTaGGAAACAGGCTTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGLRSAH*ETGFGS
Trigger: ACTTCCAAAGCCTGTTTCCAAGTGGGCACTTCTGAG...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGACACGATGATTTCCCGATTGTaGGCTAGGGTGTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: GKKLRMRLVPGIERPADTMISRL*ARVLNS
Trigger: ACTGTTTAACACCCTAGCCAACAATCGGGAAATCAT...CGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp AGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGTTGATGATTTCCCGATaGTTGGCTAGGGTGTTAAAC +
Preference number: 5 (lower is better)
Translates to: SLLQHFSGKKLRMRLVPGLMISR*LARVLN
Trigger: GTTTAACACCCTAGCCAACAATCGGGAAATCATCAA...CCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCCTCTTCCTCTGTTGGTaGATGATTTCCCGATTGTTG +
Preference number: 5 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGILFLCW*MISRLL
Trigger: CAACAATCGGGAAATCATCAACCAACAGAGGAAGAG...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGTTTTCAACAAAGCATaGCACAGGCTTTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGIVFNKA*HRLSRS
Trigger: TGACCTGGAAAGCCTGTGCAATGCTTTGTTGAAAAC...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGTGTGCTATCGGCCCCTaGAGGAATAATTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAECAIGP*RNNFAS
Trigger: GCTAGCAAAATTATTCCTCAAGGGGCCGATAGCACA...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGTTTTCGTGGCAAGCATaGTGCTATCGGCCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKFSWQA*CYRPLE
Trigger: CTCAAGGGGCCGATAGCACAATGCTTGCCACGAAAA...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCCTGCACATTTACCACTaGAGGGACATTCTTCAACGT +
Preference number: 5 (lower is better)
Translates to: FLGEEAEDAVGPRDRKACLHIYH*RDILQR
Trigger: ACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAG...GCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGAAAATGAGAAAGGCTaGCTGAACTGCCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVENEKG*LNCPEA
Trigger: TGCTTCTGGGCAGTTCAGCAAGCCTTTCTCATTTTC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGAAAATGAGAAAGGCTaGCTGAACTGCCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAEENEKG*LNCPEA
Trigger: TGCTTCTGGGCAGTTCAGCAAGCCTTTCTCATTTTC...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGGGGGCACTGTGCTATaGGTCTGTTGGCTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGGGTVL*VCWLPN
Trigger: ATTTGGAAGCCAACAGACCAATAGCACAGTGCCCCC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
53% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCATGTGGGGAATGATGTaGGAAGGGGAGTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFMWGMM*EGEWQL
Trigger: CAGCTGCCACTCCCCTTCCAACATCATTCCCCACAT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATATGTGGGGAATGATGTaGGAAGGGGAGTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHMWGMM*EGEWQL
Trigger: CAGCTGCCACTCCCCTTCCAACATCATTCCCCACAT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAACAGAGTCAGAAGTTaGCGGAGGAGCCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHNRVRS*RRSLGK
Trigger: CTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGTT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCAGGCTATGGGGGTACTaGATGTTTCGACGGCCACAG +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFRLWGY*MFRRPQ
Trigger: CTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATAGGCTATGGGGGTACTaGATGTTTCGACGGCCACAG +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHRLWGY*MFRRPQ
Trigger: CTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGGCAGTGGCTGTGTTGTaGGTGAGCTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKAVAVL*VSWLKA
Trigger: AGCTTTCAACCAGCTCACCAACAACACAGCCACTGC...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAGCTGCCCAAACAGACTaGGTGCGGTGCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: TQSQSASLDGPDTQWLKEAAQTD*VRCWLP
Trigger: TGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGC...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTGGAGCTACTGGTACTaGAGGCGGCACCAAAGACAC +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHWSYWY*RRHQRH
Trigger: GTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCA...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGACCAGTACTGGCTGCTaGACCAAACACAGAACCAGT +
Preference number: 5 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMTSTGC*TKHRTS
Trigger: ACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LLQHFSGKKLRMRLVPGINPPNV*APLFPN
Trigger: ATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATT...GATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPANPPNV*APLFPN
Trigger: ATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATT...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMRNPPNV*APLFPN
Trigger: ATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATT...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGGAAAACCCAAAGCCTaGGGATGCCACACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFGKPKA*GCHTSS
Trigger: GGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGAAAACCCAAAGCCTaGGGATGCCACACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGKPKA*GCHTSS
Trigger: GGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATGGAAAACCCAAAGCCTaGGGATGCCACACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHGKPKA*GCHTSS
Trigger: GGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCC...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCCGAAGCCACCTGTTTaGTTTGGAGAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMPKPPV*FGEENP
Trigger: TGGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGG...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCCGAAGCCACCTGTTTaGTTTGGAGAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDPKPPV*FGEENP
Trigger: TGGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLPSPNT*PPVEPR
Trigger: TCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGCTTCTGATGCCATCCTaGAAGACACAGTGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWLLMPS*KTQCSG
Trigger: GCCAGAACACTGTGTCTTCAAGGATGGCATCAGAAG...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CCGGCTAAGGCGCAGCACTGTCCTGCCTCACGCTGGCTACTATTGTACTGTACTTCACGCTGGCTACTATaGTACTGTACTGAAAAGCGC +
Preference number: 5 (lower is better)
Translates to: PAKAQHCPASRWLLLYCTSRWLL*YCTEKR
Trigger: GCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTGA...AGTACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS GCA 90 bp TCTCACTGGTGGGGTCTTCCTCTTGGCCAAGAAGTTTCTCAGTTGTaGCTGTTTCATGGGGGACAGTTTGGCTGGTACTTTGGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SHWWGLPLGQEVSQL*LFHGGQFGWYFGQG
Trigger: TCCTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000489260.1
ENST00000525980.5
ENST00000652454.1
CDS CCA 90 bp CTTGCAGGACAGCAATACTACCATCAGCCAGACAAACTGCCACCATaGAGGGGACAGTGGGGTTCCACTTCATATCAATCACCATGCCTC +
Preference number: 5 (lower is better)
Translates to: LAGQQYYHQPDKLPP*RGQWGSTSYQSPCL
Trigger: GAGGCATGGTGATTGATATGAAGTGGAACCCCACTGTCCCCTCCATGGTGGCAGTTTGTCTGGCTGATGGTAGTATTGCTGTCCTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 90 bp TCCAGCCAAAGAACTTGGAAACAGAAGCTCTCCCAGCTTGGACGGTaGGGTTTCCAGCTTACTAGAGGTGGTGGAAAGAGCAGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SSQRTWKQKLSQLGR*GFQLTRGGGKSSSR
Trigger: TCTGGAACTGCTCTTTCCACCACCTCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp CTGTGTTGGGAGAAGACTGTCCAAATGAGAAGGAACTGGAGCTACTaGTACTTGAGGCGGCACCAAAGACACTTCCACTGGTGGATGTGG +
Preference number: 5 (lower is better)
Translates to: LCWEKTVQMRRNWSY*YLRRHQRHFHWWMW
Trigger: CCACATCCACCAGTGGAAGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTGGACAGTCTTCTCCCAACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS CCA 90 bp CTGAACCCTCCTGTGCCTGATCCAAAACCAGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTCTGTTGGGACAGTGATCCGAAAGTG +
Preference number: 5 (lower is better)
Translates to: LNPPVPDPKPENPLL*VPKPEVCWDSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTCTGGTTTTGGATCAGGCACAGGAGGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000652454.1
CDS CCA 90 bp GACAGACCTCCTGTGCCTGATCCAAAACCAGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTCTGTTGGGACAGTGATCCGAAAGTG +
Preference number: 5 (lower is better)
Translates to: DRPPVPDPKPENPLL*VPKPEVCWDSDPKV
Trigger: CACTTTCGGATCACTGTCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTCTGGTTTTGGATCAGGCACAGGAGGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476004.5
CDS-3UTR CAA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCACTGTTTCCGTGACTaGCAGGACAGCAATACTACC +
Preference number: 5 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKHCFRD*QDSNTT
Trigger: GGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTG...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATAGTCGCTCTGGTGTTTaGATGAGAGACTTAACCCCA +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDSRSGV*MRDLTP
Trigger: TGGGGTTAAGTCTCTCATCAAAACACCAGAGCGACT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAAGTGAGACCGCTTCATTGCTATATTaGGAGCAGACACACTTGGCA +
Preference number: 5 (lower is better)
Translates to: PPAFNLFPMWRALGPSETASLLY*EQTHLA
Trigger: TGCCAAGTGTGTCTGCTCCAAATATAGCAATGAAGC...GGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGTTTTCAACAAAGCATaGCACAGGCTTTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVVFNKA*HRLSRS
Trigger: TGACCTGGAAAGCCTGTGCAATGCTTTGTTGAAAAC...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTTCATGGGGGACAGTTaGGCTGGTACTTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQFMGDS*AGTLGK
Trigger: CTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGAA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTGTGCTATCGGCCCCTaGAGGAATAATTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGCAIGP*RNNFAS
Trigger: GCTAGCAAAATTATTCCTCAAGGGGCCGATAGCACA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCTGCACATTTACCACTaGAGGGACATTCTTCAACGT +
Preference number: 5 (lower is better)
Translates to: QHFSGKKLRMRLVPGIERLHIYH*RDILQR
Trigger: ACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAG...CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGATTAGAGACCCCTGCTaGGCTTGGTTAGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQIRDPC*AWLAAT
Trigger: AGTGGCTGCTAACCAAGCCAAGCAGGGGTCTCTAAT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATATTAGAGACCCCTGCTaGGCTTGGTTAGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHIRDPC*AWLAAT
Trigger: AGTGGCTGCTAACCAAGCCAAGCAGGGGTCTCTAAT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATACAGCTGTTTCTATCTaGGCTGTCCCTGAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDTAVSI*AVPEAL
Trigger: CAAAGCTTCAGGGACAGCCAAGATAGAAACAGCTGT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGACAGCTGTTTCTATCTaGGCTGTCCCTGAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMTAVSI*AVPEAL
Trigger: CAAAGCTTCAGGGACAGCCAAGATAGAAACAGCTGT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTGAAAATGAGAAAGGCTaGCTGAACTGCCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGENEKG*LNCPEA
Trigger: TGCTTCTGGGCAGTTCAGCAAGCCTTTCTCATTTTC...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACGGAGGGTGTTGCCCCTaGTGCAGCAGTGAAATTAGA +
Preference number: 5 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHGGCCP*CSSEIR
Trigger: TCTAATTTCACTGCTGCACAAGGGGCAACACCCTCC...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGAGGGTGTTGCCCCTaGTGCAGCAGTGAAATTAGA +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGGCCP*CSSEIR
Trigger: TCTAATTTCACTGCTGCACAAGGGGCAACACCCTCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAAGAAGCTCTCCCAGCTaGGACGGTGGGGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TQSQSASLDGPDTQWLKERSSPS*DGGVSS
Trigger: GCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCT...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCTACTGAGGTGGTGGTaGCAGAGGATGTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLLLRWW*QRMSQG
Trigger: CCCCTGTGACATCCTCTGCAACCACCACCTCAGTAG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTGCCAAAAACGGCAGTaGAGGAAGTGCTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSCQKRQ*RKCWWL
Trigger: CAGCCACCAGCACTTCCTCAACTGCCGTTTTTGGCA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAAGGCTATGGGGGTACTaGATGTTTCGACGGCCACAG +
Preference number: 5 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRRLWGY*MFRRPQ
Trigger: CTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCT...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp AAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTGAAAAGCAGAATGCTGCCCAAACAGACTaGGTGCGGTGCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: KPWTDELFDPKLNPEKQNAAQTD*VRCWLP
Trigger: TGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGC...ATTCTGCTTTTCAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CAA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAAGGCCTGCCCGAAGGTaGTCTGTCCAAAGACCCCTG +
Preference number: 5 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGRPARR*SVQRPL
Trigger: CAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCT...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCCAAAAGCAGGAGCGTaGCTTTGGCCAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLPKAGA*LWPNSP
Trigger: GGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTGG...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGACCAGTACTGGCTGCTaGACCAAACACAGAACCAGT +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGTSTGC*TKHRTS
Trigger: ACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTGAAAAGCAGAATCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: KPWTDELFDPKLNPEKQNPSPNT*PPVEPR
Trigger: TCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGG...ATTCTGCTTTTCAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLPKDVV*LLLPNP
Trigger: CGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCACTTCTGATGCCATCCTaGAAGACACAGTGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPLLMPS*KTQCSG
Trigger: GCCAGAACACTGTGTCTTCAAGGATGGCATCAGAAG...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGATCGTTCTGCTAGTGTaGTCTGGCAACAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGIVLLV*SGNSSV
Trigger: GACACTGCTGTTGCCAGACAACACTAGCAGAACGAT...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATAATGCGAGACGGTCCTaGTTTGATGGCAACTATCTA +
Preference number: 5 (lower is better)
Translates to: VASSASTQSQSASLDGPDNARRS*FDGNYL
Trigger: TAGATAGTTGCCATCAAACAAGGACCGTCTCGCATT...ATCAGGACCATCCAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGGAGTTTTCACTAAGGTaGACTTTGACAGCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: VGLNSLLQHFSGKKLRMREFSLR*TLTAEV
Trigger: AACCTCTGCTGTCAAAGTCAACCTTAGTGAAAACTC...CCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652454.1
CDS GCA 90 bp TTCCGTGACTTGCAGGACAGCAATACTACCATCAGCCAGACAAACTaGCACCATGGAGGGGACAGTGGGGTTCCACTTCATATCAATCAC +
Preference number: 5 (lower is better)
Translates to: FRDLQDSNTTISQTN*HHGGDSGVPLHINH
Trigger: GTGATTGATATGAAGTGGAACCCCACTGTCCCCTCCATGGTGGCAGTTTGTCTGGCTGATGGTAGTATTGCTGTCCTGCAAGTCACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS GCA 90 bp GGGGCTCCAGCACACAGAGGTTACTGCTACCGTGGAAGGAAGAGTTaGACATACTTTCACTGTTTCCGTGACTTGCAGGACAGCAATACT +
Preference number: 5 (lower is better)
Translates to: GAPAHRGYCYRGRKS*TYFHCFRDLQDSNT
Trigger: AGTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGGTAGCAGTAACCTCTGTGTGCTGGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS GCA 90 bp CAAAGTAGGAAGATACTGGACCACAGTTCCATTCTGTTTTCCCACTaGCAGCTGCTTTCCTTTGGGGCTCCAGCACACAGAGGTTACTGC +
Preference number: 5 (lower is better)
Translates to: QSRKILDHSSILFSH*QLLSFGAPAHRGYC
Trigger: GCAGTAACCTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGGCAGTGGGAAAACAGAATGGAACTGTGGTCCAGTATCTTCCTACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 90 bp TCCCAAACTTTTAATGGTGAGGTCAAGGCTCTTTCCATACAAAGGTaGCCAAGGGATCTGCTCTCATTGGACTTTCTCCCAGGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: SQTFNGEVKALSIQR*PRDLLSLDFLPGAA
Trigger: GGCCGCTCCTGGGAGAAAGTCCAATGAGAGCAGATCCCTTGGCCACCTTTGTATGGAAAGAGCCTTGACCTCACCATTAAAAGTTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS CCA 90 bp TCTCTTTACCTGGAGCAGTGGATCTCACTGGTGGGGTCTTCCTCTTaGCCAAGAAGTTTCTCAGTTGTGCCTGTTTCATGGGGGACAGTT +
Preference number: 5 (lower is better)
Translates to: SLYLEQWISLVGSSS*PRSFSVVPVSWGTV
Trigger: AACTGTCCCCCATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CCA 90 bp GCCCAGTTACTGGTTCTCTTTACCTGGAGCAGTGGATCTCACTGGTaGGGTCTTCCTCTTGGCCAAGAAGTTTCTCAGTTGTGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: AQLLVLFTWSSGSHW*GLPLGQEVSQLCLF
Trigger: AAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGAACCAGTAACTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CCA 90 bp ACACCCTATCACTATGTACAGGCCCAGTTACTGGTTCTCTTTACCTaGAGCAGTGGATCTCACTGGTGGGGTCTTCCTCTTGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: TPYHYVQAQLLVLFT*SSGSHWWGLPLGQE
Trigger: TTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGAACCAGTAACTGGGCCTGTACATAGTGATAGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CCA 90 bp CCTTACCTGCTTCTCAGAACACAGAAAAAGTCTCAGTTGGGTGTTTaGAAAGATGGGAGTGACAAGCCGCCTAGAAGCCAAGGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: PYLLLRTQKKSQLGV*KDGSDKPPRSQGSG
Trigger: TCCGCTCCCTTGGCTTCTAGGCGGCTTGTCACTCCCATCTTTCCAAACACCCAACTGAGACTTTTTCTGTGTTCTGAGAAGCAGGTAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGTACTTCCTGGTGACTaGGGCTGTCGCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLVLPGD*GCRSPS
Trigger: AGAAGGAGAGCGACAGCCCAAGTCACCAGGAAGTAC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp ACTGCTGCTGGCATGAGTGGCTTCCTCTGCCTCCACTCAATCGCAGAGTGCGTCAACTTTTCACTAAGGTaGACTTTGACAGCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: TAAGMSGFLCLHSIAECVNFSLR*TLTAEV
Trigger: AACCTCTGCTGTCAAAGTCAACCTTAGTGAAAAGTT...GACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359428.10
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCCAGAAGCAGCTGGCTaGGAGGCAGAAGAGAATGGC +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLPEAAG*EAEENG
Trigger: GCCATTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTTTGAGGGCACTGGGCTaGAACTGCCCTGAGCAGATC +
Preference number: 5 (lower is better)
Translates to: HAGYYCTVLKSAMAASETLRALG*NCPEQI
Trigger: GATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAA...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCTTTTTCGTGGCAAGCATaGTGCTATCGGCCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: EADGVEVTAVSILAVPEAFSWQA*CYRPLE
Trigger: CTCAAGGGGCCGATAGCACAATGCTTGCCACGAAAA...AGCTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATCTGCACATTTACCACTaGAGGGACATTCTTCAACGT +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDLHIYH*RDILQR
Trigger: ACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAG...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGATTAGAGACCCCTGCTaGGCTTGGTTAGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSIRDPC*AWLAAT
Trigger: AGTGGCTGCTAACCAAGCCAAGCAGGGGTCTCTAAT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCCCAGGGATCGAAAGGCCTGCTGTGGATGAAGCCTTATaGGTTGGTTTTGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: FSGKKLRMRLVPGIERPAVDEAL*VGFVES
Trigger: TGATTCTACAAAACCAACCAATAAGGCTTCATCCAC...AGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTTCCCCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTGGATGAAGCCTTATaGGTTGGTTTTGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDAVDEAL*VGFVES
Trigger: TGATTCTACAAAACCAACCAATAAGGCTTCATCCAC...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGAATGAAAAACTAGTCTaGCCAGCACTTAGAGATGTC +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDANEKLV*PALRDV
Trigger: GACATCTCTAAGTGCTGGCAAGACTAGTTTTTCATT...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGGCACTGTGCTATaGGTCTGTTGGCTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSGGTVL*VCWLPN
Trigger: ATTTGGAAGCCAACAGACCAATAGCACAGTGCCCCC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp AATAAGAGTGAAGTTAAAGCACGCATCCACTCGAAAGACAAAGGTGGTCCCCATAGGCCTGCCCGAAGGTaGTCTGTCCAAAGACCCCTG +
Preference number: 5 (lower is better)
Translates to: NKSEVKARIHSKDKGGPHRPARR*SVQRPL
Trigger: CAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCT...ATGGGGACCACCTTTGTCTTTCGAGTGGATGCGTGCTTTAACTTCACTCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCCAAAAGCAGGAGCGTaGCTTTGGCCAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLPKAGA*LWPNSP
Trigger: GGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTGG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGACCAGTACTGGCTGCTaGACCAAACACAGAACCAGT +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQTSTGC*TKHRTS
Trigger: ACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: QRRSEQPAPAFLGEEAEDNPPNV*APLFPN
Trigger: ATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATT...ATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATCCGAAGCCACCTGTTTaGTTTGGAGAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHPKPPV*FGEENP
Trigger: TGGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGG...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCCCGAAGCCACCTGTTTaGTTTGGAGAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFPKPPV*FGEENP
Trigger: TGGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGG...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATATCGTTCTGCTAGTGTaGTCTGGCAACAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHIVLLV*SGNSSV
Trigger: GACACTGCTGTTGCCAGACAACACTAGCAGAACGAT...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS TCA 90 bp TGCGCTCTGGGAGTTTTCACTAAGGTTGACTTTGACAGCAGAGGTTaGGGGTGGGAAGGAGGGCTTCATTGCTATATTTGGAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: CALGVFTKVDFDSRG*GWEGGLHCYIWSRH
Trigger: GTGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTCCCACCCTCAACCTCTGCTGTCAAAGTCAACCTTAGTGAAAACTCCCAGAGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652454.1
CDS CCA 90 bp CCAGACCATATTTGTTGGACACAGCAAGCAGACTCGAGCGTTCCTTaGGCAATTCCTCAGGGGAGTCAAAGATTCTCACCTTCTTTAGCG +
Preference number: 5 (lower is better)
Translates to: PDHICWTQQADSSVP*AIPQGSQRFSPSLA
Trigger: CGCTAAAGAAGGTGAGAATCTTTGACTCCCCTGAGGAATTGCCCAAGGAACGCTCGAGTCTGCTTGCTGTGTCCAACAAATATGGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000531584.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 90 bp CAATACTACCATCAGCCAGACAAACTGCCACCATGGAGGGGACAGTaGGGTTCCACTTCATATCAATCACCATGCCTCCTGCATCTTTCA +
Preference number: 5 (lower is better)
Translates to: QYYHQPDKLPPWRGQ*GSTSYQSPCLLHLS
Trigger: TGAAAGATGCAGGAGGCATGGTGATTGATATGAAGTGGAACCCCACTGTCCCCTCCATGGTGGCAGTTTGTCTGGCTGATGGTAGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 90 bp TCACTATGTACAGGCCCAGTTACTGGTTCTCTTTACCTGGAGCAGTaGATCTCACTGGTGGGGTCTTCCTCTTGGCCAAGAAGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SLCTGPVTGSLYLEQ*ISLVGSSSWPRSFS
Trigger: TGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGAACCAGTAACTGGGCCTGTACATAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CCA 90 bp GGCCAGTGTTTTAGTTTCCATCCCCCATTGGAACACCAGGGCATTTaGGAACTATGCAGTACACAGTTCCTGCTCTACCTCCAACAATCC +
Preference number: 5 (lower is better)
Translates to: GQCFSFHPPLEHQGI*ELCSTQFLLYLQQS
Trigger: GGATTGTTGGAGGTAGAGCAGGAACTGTGTACTGCATAGTTCCCAAATGCCCTGGTGTTCCAATGGGGGATGGAAACTAAAACACTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS-3UTR CAA 90 bp CGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGTTATCAACTATTTTGTaGGGATCATCTCCGGGTTTA +
Preference number: 5 (lower is better)
Translates to: RRSEQPAPAFLGEEAEDALSTIL*GSSPGL
Trigger: TAAACCCGGAGATGATCCCAACAAAATAGTTGATAA...CGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGTTTCCGTGACTaGCAGGACAGCAATACTACC +
Preference number: 5 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRHCFRD*QDSNTT
Trigger: GGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTG...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGGGAAGGAGGGCTTCATaGCTATATTTGGAGCAGACA +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQGRRAS*LYLEQT
Trigger: TGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTCC...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGAACTTTTCACTAAGGTaGACTTTGACAGCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: WQRRSEQPAPAFLGEEAENFSLR*TLTAEV
Trigger: AACCTCTGCTGTCAAAGTCAACCTTAGTGAAAAGTT...CTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000451030.5
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCTCAGAAGTGCCCACTaGGAAACAGGCTTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSLRSAH*ETGFGS
Trigger: ACTTCCAAAGCCTGTTTCCAAGTGGGCACTTCTGAG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp AACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGATGATTTCCCGATTGTaGGCTAGGGTGTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: NVGLNSLLQHFSGKKLRMMISRL*ARVLNS
Trigger: ACTGTTTAACACCCTAGCCAACAATCGGGAAATCAT...CATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTTTGATGATTTCCCGATaGTTGGCTAGGGTGTTAAAC +
Preference number: 5 (lower is better)
Translates to: SEQPAPAFLGEEAEDAVGLMISR*LARVLN
Trigger: GTTTAACACCCTAGCCAACAATCGGGAAATCATCAA...ACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGTTTTCAACAAAGCATaGCACAGGCTTTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGVFNKA*HRLSRS
Trigger: TGACCTGGAAAGCCTGTGCAATGCTTTGTTGAAAAC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCTTCATGGGGGACAGTTaGGCTGGTACTTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLFMGDS*AGTLGK
Trigger: CTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGAA...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGGTGGGGTCTTCCTCTaGGCCAAGAAGTTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLGGVFL*AKKFLS
Trigger: ACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTTGTGCTATCGGCCCCTaGAGGAATAATTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTCAIGP*RNNFAS
Trigger: GCTAGCAAAATTATTCCTCAAGGGGCCGATAGCACA...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTGTGCTATCGGCCCCTaGAGGAATAATTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFCAIGP*RNNFAS
Trigger: GCTAGCAAAATTATTCCTCAAGGGGCCGATAGCACA...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCACAGCTGTTTCTATCTaGGCTGTCCCTGAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFTAVSI*AVPEAL
Trigger: CAAAGCTTCAGGGACAGCCAAGATAGAAACAGCTGT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATCAGAAGCAGATGGGGTaGAAGTCACAGCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: SGCMCFDGNVGLNSLLQHQKQMG*KSQLFL
Trigger: TAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG...ATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCAGAAGCAGATGGGGTaGAAGTCACAGCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQQKQMG*KSQLFL
Trigger: TAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGGAGGGTGTTGCCCCTaGTGCAGCAGTGAAATTAGA +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLGGCCP*CSSEIR
Trigger: TCTAATTTCACTGCTGCACAAGGGGCAACACCCTCC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GAGGCTCTGCTGGCTTCTCAGAGCCACAGAAACGGGGCAATCTTCTTGGCTGTGGTGGATGAAGCCTTATaGGTTGGTTTTGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: EALLASQSHRNGAIFLAVVDEAL*VGFVES
Trigger: TGATTCTACAAAACCAACCAATAAGGCTTCATCCAC...CACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTGGTCGTGGATGAAGCCTTATaGGTTGGTTTTGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: LNSLLQHFSGKKLRMRLVVDEAL*VGFVES
Trigger: TGATTCTACAAAACCAACCAATAAGGCTTCATCCAC...GACCAACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTGCCAAAAACGGCAGTaGAGGAAGTGCTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLCQKRQ*RKCWWL
Trigger: CAGCCACCAGCACTTCCTCAACTGCCGTTTTTGGCA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGCTGAGGATGCGGTTAATGAAAAACTAGTCTaGCCAGCACTTAGAGATGTC +
Preference number: 5 (lower is better)
Translates to: RSEQPAPAFLGEEAEDAVNEKLV*PALRDV
Trigger: GACATCTCTAAGTGCTGGCAAGACTAGTTTTTCATT...AACCGCATCCTCAGCTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGAACAGAGTCAGAAGTTaGCGGAGGAGCCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLNRVRS*RRSLGK
Trigger: CTTCCCCAGGCTCCTCCGCAAACTTCTGACTCTGTT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CAGCCACCAAAACCCTGGACAGACGAGTTATTTGACCCAAAGCTGAACCCTCCTTTGTTGGTGAGCTGGTaGAAAGCTGAGCTAGAACTG +
Preference number: 5 (lower is better)
Translates to: QPPKPWTDELFDPKLNPPLLVSW*KAELEL
Trigger: CAGTTCTAGCTCAGCTTTCAACCAGCTCACCAACAA...AGGAGGGTTCAGCTTTGGGTCAAATAACTCGTCTGTCCAGGGTTTTGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGCCGAAGCCACCTGTTTaGTTTGGAGAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSPKPPV*FGEENP
Trigger: TGGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGG...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 90 bp CTGCTACCGTGGAAGGAAGAGTTGCACATACTTTCACTGTTTCCGTaGCTTGCAGGACAGCAATACTACCATCAGCCAGACAAACTGCCA +
Preference number: 5 (lower is better)
Translates to: LLPWKEELHILSLFP*LAGQQYYHQPDKLP
Trigger: TGGCAGTTTGTCTGGCTGATGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGGTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS TCA 90 bp CTGAAAGTGTGCAATCTCCTCCCCAATTCCAGCCATTACAGGATCTaGATCTTTCCACTGATGTCCCTGCTTTTCTGCAACAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LKVCNLLPNSSHYRI*IFPLMSLLFCNSRL
Trigger: CAGCCTGCTGTTGCAGAAAAGCAGGGACATCAGTGGAAAGATTCAGATCCTGTAATGGCTGGAATTGGGGAGGAGATTGCACACTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000530630.1
ENST00000651022.1
ENST00000652454.1
CDS TCA 90 bp GCTCTGGGAGCTATTTTCACTAAGGTTGACTTTGACAGCAGAGGTTaGGGGTGGGAAGGAGGGCTTCATTGCTATATTTGGAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: ALGAIFTKVDFDSRG*GWEGGLHCYIWSRH
Trigger: GTGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTCCCACCCTCAACCTCTGCTGTCAAAGTCAACCTTAGTGAAAATAGCTCCCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS GCA 90 bp ACCGTGGAAGGAAGAGTTGCACATACTTTCACTGTTTCCGTGACTTaGAGGACAGCAATACTACCATCAGCCAGACAAACTGCCACCATG +
Preference number: 5 (lower is better)
Translates to: TVEGRVAHTFTVSVT*RTAILPSARQTATM
Trigger: CATGGTGGCAGTTTGTCTGGCTGATGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 90 bp CTTGTGGATGAAGCCTTATTGGTTGGTTTTGTAGAATCATCTGCTTaGCCAACCCGCAGTCCTGAAAAACTTCCCAGAGTCTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LVDEALLVGFVESSA*PTRSPEKLPRVSPA
Trigger: GGCTGGAGAGACTCTGGGAAGTTTTTCAGGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAACCAACCAATAAGGCTTCATCCACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCCGTGGAAGGAAGAGTaGCACATACTTTCACTGTTT +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQPWKEE*HILSLF
Trigger: AAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACAAGGAGTCATCACTCTaGTCTGTCACAGGCAATTCA +
Preference number: 5 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHKESSL*SVTGNS
Trigger: TGAATTGCCTGTGACAGACAAGAGTGATGACTCCTT...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGAAGAAGATGATTTCCCGATTGTaGGCTAGGGTGTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: FDGNVGLNSLLQHFSGKKMISRL*ARVLNS
Trigger: ACTGTTTAACACCCTAGCCAACAATCGGGAAATCAT...CTTCTTCCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCTCTTCCTCTGTTGGTaGATGATTTCCCGATTGTTG +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQLFLCW*MISRLL
Trigger: CAACAATCGGGAAATCATCAACCAACAGAGGAAGAG...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGGTGGGGTCTTCCTCTaGGCCAAGAAGTTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLGGVFL*AKKFLS
Trigger: ACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCTTGTGCTATCGGCCCCTaGAGGAATAATTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: EADGVEVTAVSILAVPEACAIGP*RNNFAS
Trigger: GCTAGCAAAATTATTCCTCAAGGGGCCGATAGCACA...AGCTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CAA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGACAGCTGTTTCTATCTaGGCTGTCCCTGAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKTAVSI*AVPEAL
Trigger: CAAAGCTTCAGGGACAGCCAAGATAGAAACAGCTGT...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CAA 90 bp CAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCAGAAGCAGATGGGGTaGAAGTCACAGCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: QKQMGLKSQLFLSWLSLKQKQMG*KSQLFL
Trigger: TAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG...CTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CAA 90 bp GAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCTGAAAATGAGAAAGGCTaGCTGAACTGCCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: EADGVEVTAVSILAVPEAENEKG*LNCPEA
Trigger: TGCTTCTGGGCAGTTCAGCAAGCCTTTCTCATTTTC...AGCTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CAA 90 bp TCTTCCCAACTCCCCGCTGCTCATGACCCAAGCCAAAGCACTGTCAGATTCTGGGTGGATGAAGCCTTATaGGTTGGTTTTGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: SSQLPAAHDPSQSTVRFWVDEAL*VGFVES
Trigger: TGATTCTACAAAACCAACCAATAAGGCTTCATCCAC...CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTTGTTGGTGAGCTGGTaGAAAGCTGAGCTAGAACTG +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSLLVSW*KAELEL
Trigger: CAGTTCTAGCTCAGCTTTCAACCAGCTCACCAACAA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGCAGTGGCTGTGTTGTaGGTGAGCTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLAVAVL*VSWLKA
Trigger: AGCTTTCAACCAGCTCACCAACAACACAGCCACTGC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIPSPNT*PPVEPR
Trigger: TCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR CAA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGATCGCAGAGTGCGTCCTaGGATGGTCCTGATACACAA +
Preference number: 5 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGSQSAS*DGPDTQ
Trigger: TTGTGTATCAGGACCATCCAAGGACGCACTCTGCGA...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS TCA 90 bp CACAGAATAATCCCAAGAGGAAAGAATCTGGTGAAAACCATTCATTaGGGACTTCCTAACAGAAGCTCCACACCGGGGCACCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: HRIIPRGKNLVKTIH*GLPNRSSTPGHLLA
Trigger: AGCCAAGAGGTGCCCCGGTGTGGAGCTTCTGTTAGGAAGTCCTCAATGAATGGTTTTCACCAGATTCTTTCCTCTTGGGATTATTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS GCA 90 bp GCGACAGTGACAGCAACAGGTACTTTCTCTGATTTTCACGCACCTTaGTGGGAAGTTTTTAATCATTCTGGCACCCAGGCTCAGGATTTC +
Preference number: 5 (lower is better)
Translates to: ATVTATGTFSDFHAP*WEVFNHSGTQAQDF
Trigger: GAAATCCTGAGCCTGGGTGCCAGAATGATTAAAAACTTCCCAGCAAGGTGCGTGAAAATCAGAGAAAGTACCTGTTGCTGTCACTGTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS CCA 90 bp GCAGTAAAATTAAACCCTGAGGGCACGCCTGACGTCTTGGTTGGCTaGGTACTAGTTAGGCTTGTGGATGAAGCCTTATTGGTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: AVKLNPEGTPDVLVG*VLVRLVDEALLVGF
Trigger: AAAACCAACCAATAAGGCTTCATCCACAAGCCTAACTAGTACCCAGCCAACCAAGACGTCAGGCGTGCCCTCAGGGTTTAATTTTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 90 bp AGTATGAAATCCAACCTGGCCAGTGTTTTAGTTTCCATCCCCCATTaGAACACCAGGGCATTTGGGAACTATGCAGTACACAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SMKSNLASVLVSIPH*NTRAFGNYAVHSSC
Trigger: GCAGGAACTGTGTACTGCATAGTTCCCAAATGCCCTGGTGTTCCAATGGGGGATGGAAACTAAAACACTGGCCAGGTTGGATTTCATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS-3UTR CAA 90 bp CACGCTGGCTACTATTGTACTGTACTGAAAAGCGCTATGGCTGCTTCTGAAACTGTGATTTCTGTACCATaGAGGGCACTGGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: HAGYYCTVLKSAMAASETVISVP*RALGLN
Trigger: GTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCAC...AGTTTCAGAAGCAGCCATAGCGCTTTTCAGTACAGTACAATAGTAGCCAGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGAACTTGGAAACAGGCTTaGGAAGTTCGGGCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: CLHTSWVYPRAICTVVSRTWKQA*EVRAFN
Trigger: GTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAGT...TCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCATGATTTCCCGATTGTaGGCTAGGGTGTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFMISRL*ARVLNS
Trigger: ACTGTTTAACACCCTAGCCAACAATCGGGAAATCAT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGTTGATGATTTCCCGATaGTTGGCTAGGGTGTTAAAC +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQLMISR*LARVLN
Trigger: GTTTAACACCCTAGCCAACAATCGGGAAATCATCAA...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTGTTTTCAACAAAGCATaGCACAGGCTTTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTVFNKA*HRLSRS
Trigger: TGACCTGGAAAGCCTGTGCAATGCTTTGTTGAAAAC...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAACTGCACATTTACCACTaGAGGGACATTCTTCAACGT +
Preference number: 5 (lower is better)
Translates to: PEADGVEVTAVSILAVPELHIYH*RDILQR
Trigger: ACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAG...TTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CAA 90 bp ACTCAATCGCAGAGTGCGTCCTTGGATGGTCCTGATACACAATGGCTAAAAGAAACCAGTACTGGCTGCTaGACCAAACACAGAACCAGT +
Preference number: 5 (lower is better)
Translates to: TQSQSASLDGPDTQWLKETSTGC*TKHRTS
Trigger: ACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGT...TTCTTTTAGCCATTGTGTATCAGGACCATCCAAGGACGCACTCTGCGATTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGACCAGTACTGGCTGCTaGACCAAACACAGAACCAGT +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLTSTGC*TKHRTS
Trigger: ACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATACCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIPKDVV*LLLPNP
Trigger: CGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS TCA 90 bp ATCATGCACGCAGAGAGTGTGAGGTTATCACAGCTCAAGGCCAGGTaGTGGATTGGGAATTTCATAGGAACTAGCAAGCCTTGGACTTTA +
Preference number: 5 (lower is better)
Translates to: IMHAESVRLSQLKAR*WIGNFIGTSKPWTL
Trigger: TAAAGTCCAAGGCTTGCTAGTTCCTATGAAATTCCCAATCCATCACCTGGCCTTGAGCTGTGATAACCTCACACTCTCTGCGTGCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000531584.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS TCA 90 bp TGCAGCAGTAAACTTTTCACTAAGGTTGACTTTGACAGCAGAGGTTaGGGGTGGGAAGGAGGGCTTCATTGCTATATTTGGAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: CSSKLFTKVDFDSRG*GWEGGLHCYIWSRH
Trigger: GTGTCTGCTCCAAATATAGCAATGAAGCCCTCCTTCCCACCCTCAACCTCTGCTGTCAAAGTCAACCTTAGTGAAAAGTTTACTGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000530863.1
ENST00000651022.1
CDS TCA 90 bp TTCATGGGGGACAGTTTGGCTGGTACTTTGGGCAAGGATTTGGTGTaGGATTCTATGGTGGTTTTCAACAAAGCATTGCACAGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: FMGDSLAGTLGKDLV*DSMVVFNKALHRLS
Trigger: GGAAAGCCTGTGCAATGCTTTGTTGAAAACCACCATAGAATCTCACACCAAATCCTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000489260.1
ENST00000525980.5
ENST00000652454.1
CDS TCA 90 bp GTGCATCTTCACTCTCCAGAGACTGGGAGACAGATGACGTTGAGCTaGCTTCATCCAAGTCTTCATAATATCTCTGAGACAGAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: VHLHSPETGRQMTLS*LHPSLHNISETERL
Trigger: CAGCCTTTCTGTCTCAGAGATATTATGAAGACTTGGATGAAGTCAGCTCAACGTCATCTGTCTCCCAGTCTCTGGAGAGTGAAGATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS TCA 90 bp GTTTCTATCTTGGCTGTCCCTGAAGCTTTGTCACCAGATGATAACTaGCCGGATGCTGGTGTAGGCCCAGATGGCTTAAGGGAATTTATT +
Preference number: 5 (lower is better)
Translates to: VSILAVPEALSPDDN*PDAGVGPDGLREFI
Trigger: AATAAATTCCCTTAAGCCATCTGGGCCTACACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGGACAGCCAAGATAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000524578.5
ENST00000525980.5
ENST00000526346.5
ENST00000531929.5
ENST00000651334.1
ENST00000652454.1
CDS TCA 90 bp GAGGATGATTGCTGGCCAAAGACTATTCCACCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTATTACTAGACCCAAAACCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: EDDCWPKTIPPVLAA*PNTEPVLLDPKPEA
Trigger: AGCTTCAGGTTTTGGGTCTAGTAATACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAGTCTTTGGCCAGCAATCATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 90 bp AATCAATCAGAAAAGATTTCAACATGGGACAAGGTGACTCAGGTGTaGTCTTCCAGTGAGAGCAGGAATGCCCTGTCCAGACTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: NQSEKISTWDKVTQV*SSSESRNALSRLSA
Trigger: AGCAGAGAGTCTGGACAGGGCATTCCTGCTCTCACTGGAAGATCACACCTGAGTCACCTTGTCCCATGTTGAAATCTTTTCTGATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525561.1
CDS GCA 90 bp GCAAGTCATCTGATTCTGTTCGCAGCATCTTCATCTCCTCAGAAGTaGCCACTTGGAAACAGGCTTTGGAAGTTCGGGCTTTTAACTCTT +
Preference number: 5 (lower is better)
Translates to: ASHLILFAASSSPQK*PLGNRLWKFGLLTL
Trigger: AAGAGTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAGTGGGCACTTCTGAGGAGATGAAGATGCTGCGAACAGAATCAGATGACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000530630.1
ENST00000651022.1
ENST00000652454.1
CDS GCA 90 bp TTAAAGCCAGTCCCTGATGGAGAAAATGAGAAAGGCTTGCTGAACTaGCCAGAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTG +
Preference number: 5 (lower is better)
Translates to: LKPVPDGENEKGLLN*PEADGVEVTAVSIL
Trigger: CAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTTCTCATTTTCTCCATCAGGGACTGGCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000524578.5
ENST00000525980.5
ENST00000528114.1
ENST00000531929.5
ENST00000651334.1
ENST00000652454.1
CDS CCA 90 bp GGAGGGTGTTGCCCCTTGTGCAGCAGTGAAATTAGAAGACGGTGTTaGTGTGATTATCCCAAAATTAAAGCCAGTCCTGAAGCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: GGCCPLCSSEIRRRC*CDYPKIKASPEALS
Trigger: TGACAAAGCTTCAGGACTGGCTTTAATTTTGGGATAATCACACCAACACCGTCTTCTAATTTCACTGCTGCACAAGGGGCAACACCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470765.5
CDS CCA 90 bp ACAGTGACAGCAACAGGTACTTTCTCTGATTTTCACGCACCTTGCTaGGAAGTTTTTAATCATTCTGGCACCCAGGCTCAGGATTTCCTG +
Preference number: 5 (lower is better)
Translates to: TVTATGTFSDFHAPC*EVFNHSGTQAQDFL
Trigger: CAGGAAATCCTGAGCCTGGGTGCCAGAATGATTAAAAACTTCCCAGCAAGGTGCGTGAAAATCAGAGAAAGTACCTGTTGCTGTCACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS-3UTR CAA 90 bp CTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACACTTTATCAACTATTTaGTTGGGATCATCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: LHTSWVYPRAICTVVSRHTLSTI*LGSSPG
Trigger: ACCCGGAGATGATCCCAACAAAATAGTTGATAAAGT...GTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTTTGATGATTTCCCGATaGTTGGCTAGGGTGTTAAAC +
Preference number: 5 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTLMISR*LARVLN
Trigger: GTTTAACACCCTAGCCAACAATCGGGAAATCATCAA...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp AAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGAGGGCGCTAGGTCCAGGACATTCTTCAACGTaGATTCAGTCAAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: KDDPPAFNLFPMWRALGPGHSST*IQSKCL
Trigger: TAAACACTTTGACTGAATCAACGTTGAAGAATGTCC...TGGACCTAGCGCCCTCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp ATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGGGGACATTCTTCAACGTaGATTCAGTCAAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: MCFDGNVGLNSLLQHFSGGHSST*IQSKCL
Trigger: TAAACACTTTGACTGAATCAACGTTGAAGAATGTCC...CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCAGAAGCAGATGGGGTaGAAGTCACAGCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLQKQMG*KSQLFL
Trigger: TAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTG...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAGGCACGCCTGACGTCTaGGTTGGCTGGGTACTAGTT +
Preference number: 5 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIGTPDV*VGWVLV
Trigger: AACTAGTACCCAGCCAACCAAGACGTCAGGCGTGCC...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGAATGAAAAACTAGTCTaGCCAGCACTTAGAGATGTC +
Preference number: 5 (lower is better)
Translates to: LSGCMCFDGNVGLNSLLQNEKLV*PALRDV
Trigger: GACATCTCTAAGTGCTGGCAAGACTAGTTTTTCATT...CTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGTTGTTGGTGAGCTGGTaGAAAGCTGAGCTAGAACTG +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLLLVSW*KAELEL
Trigger: CAGTTCTAGCTCAGCTTTCAACCAGCTCACCAACAA...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLNPPNV*APLFPN
Trigger: ATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATT...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCCGAAGGATGTGGTGTaGCTGCTGCTCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLPKDVV*LLLPNP
Trigger: CGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000483497.6
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAAAGCTGAGGATGCGGTaGGTCCCAGGGATCGAAAGG +
Preference number: 5 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIKLRMR*VPGIER
Trigger: CCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000476004.5
CDS-3UTR CAA 90 bp AACAGCAGTGTCTGTCTTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTCTATTTTCACTAAGGTaGACTTTGACAGCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: NSSVCLHTSWVYPRAICTLFSLR*TLTAEV
Trigger: AACCTCTGCTGTCAAAGTCAACCTTAGTGAAAATAG...AGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS TCA 90 bp CCACTGTTTCCAAATAGGTTAGAGGTATCTGAAGAGATGAAGATGTaGGGGAGGTCAGAGGGAGACAAATGTCCTTACCTGCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: PLFPNRLEVSEEMKM*GRSEGDKCPYLLLR
Trigger: TCTGAGAAGCAGGTAAGGACATTTGTCTCCCTCTGACCTCCCTCACATCTTCATCTCTTCAGATACCTCTAACCTATTTGGAAACAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS GCA 90 bp TTTAGTTTCCATCCCCCATTGGAACACCAGGGCATTTGGGAACTATaGAGTACACAGTTCCTGCTCTACCTCCAACAATCCTTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: FSFHPPLEHQGIWEL*STQFLLYLQQSLSF
Trigger: AAAGCTTAAGGATTGTTGGAGGTAGAGCAGGAACTGTGTACTGCATAGTTCCCAAATGCCCTGGTGTTCCAATGGGGGATGGAAACTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGACTTTATCAACTATTTaGTTGGGATCATCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSTLSTI*LGSSPG
Trigger: ACCCGGAGATGATCCCAACAAAATAGTTGATAAAGT...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCATTAATCTGATCACTTaGTCGAGCAAGGATACTAAC +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFINLIT*SSKDTN
Trigger: GTTAGTATCCTTGCTCGACAAAGTGATCAGATTAAT...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCGATGGTGATTTCCACTaGGTTTGTATAGTCTACGAC +
Preference number: 5 (lower is better)
Translates to: FLSGCMCFDGNVGLNSLLDGDFH*VCIVYD
Trigger: GTCGTAGACTATACAAACCAAGTGGAAATCACCATC...GAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp GGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCGGACATTCTTCAACGTaGATTCAGTCAAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: GCMCFDGNVGLNSLLQHFGHSST*IQSKCL
Trigger: TAAACACTTTGACTGAATCAACGTTGAAGAATGTCC...GAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCACACTTCCTGGGTCTACCCAAGGGCTATCTGCACTGTGGTTAGTAGACACTAATGAAAAACTAGTCTaGCCAGCACTTAGAGATGTC +
Preference number: 5 (lower is better)
Translates to: FTLPGSTQGLSALWLVDTNEKLV*PALRDV
Trigger: GACATCTCTAAGTGCTGGCAAGACTAGTTTTTCATT...AGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCCAAAAGCAGGAGCGTaGCTTTGGCCAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLPKAGA*LWPNSP
Trigger: GGGGCTGTTTGGCCAAAGCAACGCTCCTGCTTTTGG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGAATGCGAGACGGTCCTaGTTTGATGGCAACTATCTA +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLNARRS*FDGNYL
Trigger: TAGATAGTTGCCATCAAACAAGGACCGTCTCGCATT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS TCA 90 bp CTCTGTGGTCTCTTTAATCTCCAAAAGAAAGGTATGCAAGTCATCTaGTTCTGTTCGCAGCATCTTCATCTCCTCAGAAGTGCCCACTTG +
Preference number: 5 (lower is better)
Translates to: LCGLFNLQKKGMQVI*FCSQHLHLLRSAHL
Trigger: CAAGTGGGCACTTCTGAGGAGATGAAGATGCTGCGAACAGAATCAGATGACTTGCATACCTTTCTTTTGGAGATTAAAGAGACCACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000530630.1
ENST00000651022.1
ENST00000652454.1
CDS TCA 90 bp CTAAAGCAGAGGCTAGGATCCAGCTCAGCCTATCTCAAACCCTTGTaGATCAGTGCCATAAAACTTGAGGACTGCAGAAAACAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: LKQRLGSSSAYLKPL*ISAIKLEDCRKQCK
Trigger: TTTACACTGTTTTCTGCAGTCCTCAAGTTTTATGGCACTGATTCACAAGGGTTTGAGATAGGCTGAGCTGGATCCTAGCCTCTGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CCA 90 bp AAGGCGCCGAATTTCCTGAAGCTGAGCTTCACTCTTGGGATCCAGTaGTCTTTTATAAAGCAAATGCAGATAACCAGAGTCACGATTTCT +
Preference number: 5 (lower is better)
Translates to: KAPNFLKLSFTLGIQ*SFIKQMQITRVTIS
Trigger: AGAAATCGTGACTCTGGTTATCTGCATTTGCTTTATAAAAGACCACTGGATCCCAAGAGTGAAGCTCAGCTTCAGGAAATTCGGCGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000651022.1
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGTTATCAACTATTTTGTaGGGATCATCTCCGGGTTTA +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSLSTIL*GSSPGL
Trigger: TAAACCCGGAGATGATCCCAACAAAATAGTTGATAA...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGGATGGTGATTTCCACTaGGTTTGTATAGTCTACGAC +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLDGDFH*VCIVYD
Trigger: GTCGTAGACTATACAAACCAAGTGGAAATCACCATC...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGCTCCAGCATTTCTCGGGACATTCTTCAACGTaGATTCAGTCAAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: CMCFDGNVGLNSLLQHFSGHSST*IQSKCL
Trigger: TAAACACTTTGACTGAATCAACGTTGAAGAATGTCC...CGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp GAAGCAGATGGGGTTGAAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGAAGCTGGACATTCTTCAACGTaGATTCAGTCAAAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: EADGVEVTAVSILAVPEAGHSST*IQSKCL
Trigger: TAAACACTTTGACTGAATCAACGTTGAAGAATGTCC...AGCTTCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526346.5
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGGAAAACCCAAAGCCTaGGGATGCCACACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLGKPKA*GCHTSS
Trigger: GGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGTTGGAGCAGACACACTaGGCACTGGTGTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLLEQTH*ALVCFP
Trigger: TGGAAAGCACACCAGTGCCAAGTGTGTCTGCTCCAA...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGAATGAAAAACTAGTCTaGCCAGCACTTAGAGATGTC +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLNEKLV*PALRDV
Trigger: GACATCTCTAAGTGCTGGCAAGACTAGTTTTTCATT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000652454.1
CDS TCA 90 bp GAAGGGGTTGCAGGGTTATTCTTCAATTCCTGCACATTTACCACTTaGGGGACATTCTTCAACGTTGATTCAGTCAAAGTGTTTACAGCT +
Preference number: 5 (lower is better)
Translates to: EGVAGLFFNSCTFTT*GTFFNVDSVKVFTA
Trigger: AGCTGTAAACACTTTGACTGAATCAACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAGGAATTGAAGAATAACCCTGCAACCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000526346.5
ENST00000531929.5
ENST00000652454.1
CDS-3UTR CAA 90 bp AGTTTCAGCCTCAAAAAGATGACCCACCAGCATTCAACCTCTTCCCTATGTGGATTATCAACTATTTTGTaGGGATCATCTCCGGGTTTA +
Preference number: 5 (lower is better)
Translates to: SFSLKKMTHQHSTSSLCGLSTIL*GSSPGL
Trigger: TAAACCCGGAGATGATCCCAACAAAATAGTTGATAA...TCCACATAGGGAAGAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS-3UTR CAA 90 bp TTGTTTCTTTCTGGGTGTATGTGTTTTGATGGCAACGTCGGTCTGAACAGCCTGATTAATCTGATCACTTaGTCGAGCAAGGATACTAAC +
Preference number: 5 (lower is better)
Translates to: LFLSGCMCFDGNVGLNSLINLIT*SSKDTN
Trigger: GTTAGTATCCTTGCTCGACAAAGTGATCAGATTAAT...CAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS TCA 90 bp ACACCTCGTAACAAAAGAGAGGATTTCATGATCAGCAATGAATGGTaGATCTCGGAAATTTCTTGCAAGTCACACTACTTGCCCAGACAT +
Preference number: 5 (lower is better)
Translates to: TPRNKREDFMISNEW*ISEISCKSHYLPRH
Trigger: ATGTCTGGGCAAGTAGTGTGACTTGCAAGAAATTTCCGAGATTCACCATTCATTGCTGATCATGAAATCCTCTCTTTTGTTACGAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465486.6
ENST00000483497.6
ENST00000531600.1
CDS TCA 90 bp AAGTCACCTAAGCCTCCTGATAACAACTTAGGGCAGATGGCGTTATaGAAGAATTTCTTGAAGTCCCTTCTGTCTCAAAGATCTATGATT +
Preference number: 5 (lower is better)
Translates to: KSPKPPDNNLGQMAL*KNFLKSLLSQRSMI
Trigger: AATCATAGATCTTTGAGACAGAAGGGACTTCAAGAAATTCTTTCATAACGCCATCTGCCCTAAGTTGTTATCAGGAGGCTTAGGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526412.1
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGAAGGAGTCATCACTCTaGTCTGTCACAGGCAATTCA +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLKESSL*SVTGNS
Trigger: TGAATTGCCTGTGACAGACAAGAGTGATGACTCCTT...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGCTTCATTGCTATATTaGGAGCAGACACACTTGGCA +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLASLLY*EQTHLA
Trigger: TGCCAAGTGTGTCTGCTCCAAATATAGCAATGAAGC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGCTGCACATTTACCACTaGAGGGACATTCTTCAACGT +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLLHIYH*RDILQR
Trigger: ACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAG...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000652454.1
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLNPPNV*APLFPN
Trigger: ATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATT...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 90 bp AGTGAAAACAGAAGTGAACACCTCGTAACAAAAGAGAGGATTTCATaGTCAGCAATGAATGGTGAATCTCGGAAATTTCTTGCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: SENRSEHLVTKERIS*SAMNGESRKFLASH
Trigger: GTGACTTGCAAGAAATTTCCGAGATTCACCATTCATTGCTGATCATGAAATCCTCTCTTTTGTTACGAGGTGTTCACTTCTGTTTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465486.6
ENST00000483497.6
ENST00000531600.1
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGGATGGTGATTTCCACTaGGTTTGTATAGTCTACGAC +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLDGDFH*VCIVYD
Trigger: GTCGTAGACTATACAAACCAAGTGGAAATCACCATC...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp CCCAACATGAAATATAAAACAAGTAATCATGCGCCTTGTGAGTTTTGGTTTCTGACTTTATCAACTATTTaGTTGGGATCATCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: PNMKYKTSNHAPCEFWFLTLSTI*LGSSPG
Trigger: ACCCGGAGATGATCCCAACAAAATAGTTGATAAAGT...CAGAAACCAAAACTCACAAGGCGCATGATTACTTGTTTTATATTTCATGTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS-3UTR CAA 90 bp TTCTGTACGGAAACAGACTGTTTAATAGTGGGAGGGAAAACCCAACATGAAATAATTAATCTGATCACTTaGTCGAGCAAGGATACTAAC +
Preference number: 5 (lower is better)
Translates to: FCTETDCLIVGGKTQHEIINLIT*SSKDTN
Trigger: GTTAGTATCCTTGCTCGACAAAGTGATCAGATTAAT...TATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359428.10
ENST00000411637.6
CDS GCA 72 bp ATCGCGCCGCCCTCAGTGTGTCGAAGCAGCCAACGCTaGCTCCCACGGCCTTGCCCACGGAACCCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: IAPPSVCRSSQR*LPRPCPRNPGR
Trigger: GCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAGCGTTGGCTGCTTCGACACACTGAGGGCGGCGCGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS CAA 90 bp GCCGCCCTCAGTGTGTCGAAGCAGCCAACGCTGCCTCCCACGGCCTaGCCCACGGAACCCAGGCCGCTCGACAGCAAACTTCCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: AALSVSKQPTLPPTA*PTEPRPLDSKLPPL
Trigger: GAGGGGAGGAAGTTTGCTGTCGAGCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAGCGTTGGCTGCTTCGACACACTGAGGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS CCA 72 bp GCAACAGCCTGCCCTTCAGGGTCGGAGACAGGCTCATaGCCAGGGACCCGAATCCTCCTGCGCTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: ATACPSGSETGS*PGTRILLRWQL
Trigger: CAGCTGCCAGCGCAGGAGGATTCGGGTCCCTGGCCATGAGCCTGTCTCCGACCCTGAAGGGCAGGCTGTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS CAA 72 bp CTGCCCAAACAGACTTGGTGCGGTGCTGGCTGCCACTaGCCCAAACACGGGCGTGGCAGAGGGGGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LPKQTWCGAGCH*PKHGRGRGGSG
Trigger: GCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp GTGTGTCGAAGCAGCCAACGCTGCCTCCCACGGCCTTaGCCACGGAACCCAGGCCGCTCGACAGCAAACTTC +
Preference number: 6 (lower is better)
Translates to: VCRSSQRCLPRP*PRNPGRSTANF
Trigger: GAAGTTTGCTGTCGAGCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAGCGTTGGCTGCTTCGACACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS GCA 72 bp TGCCCAAACAGACTTGGTGCGGTGCTGGCTGCCACTTaGCCAAACACGGGCGTGGCAGAGGGGGCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: CPNRLGAVLAAT*PNTGVAEGAVA
Trigger: AGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp AGTCTGCTGCCCAAACAGACTTGGTGCGGTGCTGGCTaGCACTTGCCCAAACACGGGCGTGGCAGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: SLLPKQTWCGAG*HLPKHGRGRGG
Trigger: GCCCCCTCTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGCAGACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS TCA 72 bp GAAGGAGTGCGAACCACGGGGGCGTGCCGAGGGGCCTaGACCACTGCCTCGTCATCTTTACAGGACGTCCGT +
Preference number: 6 (lower is better)
Translates to: EGVRTTGACRGA*TTASSSLQDVR
Trigger: ACGGACGTCCTGTAAAGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGCCCCCGTGGTTCGCACTCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS GCA 72 bp GCGAACCACGGGGGCGTGCCGAGGGGCCTGAACCACTaGCTCGTCATCTTTACAGGACGTCCGTGCATCTTC +
Preference number: 6 (lower is better)
Translates to: ANHGGVPRGLNH*LVIFTGRPCIF
Trigger: GAAGATGCACGGACGTCCTGTAAAGATGACGAGGCAGTGGTTCAGGCCCCTCGGCACGCCCCCGTGGTTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS GCA 72 bp GCTGCTCCCAAACCCGAATCCTCCTGCGCTGGCAGCTaGAGTGCCCTCTCCGAACACTTTGCCTCCCGTCGA +
Preference number: 6 (lower is better)
Translates to: AAPKPESSCAGS*SALSEHFASRR
Trigger: TCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCGGGTTTGGGAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000650694.1
ENST00000652454.1
CDS CAA 72 bp AGTGTGTCGAAGCAGCCAACGCTGCCTCCCACGGCCTaGCCCACGGAACCCAGGCCGCTCGACAGCAAACTT +
Preference number: 6 (lower is better)
Translates to: SVSKQPTLPPTA*PTEPRPLDSKL
Trigger: AAGTTTGCTGTCGAGCGGCCTGGGTTCCGTGGGCAAGGCCGTGGGAGGCAGCGTTGGCTGCTTCGACACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS CAA 72 bp CCTGCGCTGGCAGCTGCAGTGCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGAGGGCTTGTAAAGGCT +
Preference number: 6 (lower is better)
Translates to: PALAAAVPSPNT*PPVEPRGLVKA
Trigger: AGCCTTTACAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000650694.1
ENST00000652454.1
CDS CAA 90 bp CCGAATCCTCCTGCGCTGGCAGCTGCAGTGCCCTCTCCGAACACTTaGCCTCCCGTCGAGCCCAGAGGGCTTGTAAAGGCTGGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: PNPPALAAAVPSPNT*PPVEPRGLVKAGAE
Trigger: TTCAGCCCCAGCCTTTACAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCAGGAGGATTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000650694.1
ENST00000652454.1
CDS CAA 90 bp ACCAGTCTGCTGCCCAAACAGACTTGGTGCGGTGCTGGCTGCCACTaGCCCAAACACGGGCGTGGCAGAGGGGGCAGTGGCTGTGTTGTT +
Preference number: 6 (lower is better)
Translates to: TSLLPKQTWCGAGCH*PKHGRGRGGSGCVV
Trigger: AACAACACAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGCAGACTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp TGCTACCAGTCTGCTGCCCAAACAGACTTGGTGCGGTaGTGGCTGCCACTTGCCCAAACACGGGCGTGGCAG +
Preference number: 6 (lower is better)
Translates to: CYQSAAQTDLVR*WLPLAQTRAWQ
Trigger: CTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGCAGACTGGTAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp GGCTGTGCTACCAGTCTGCTGCCCAAACAGACTTGGTaGGGTGCTGGCTGCCACTTGCCCAAACACGGGCGT +
Preference number: 6 (lower is better)
Translates to: GCATSLLPKQTW*GAGCHLPKHGR
Trigger: ACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGCAGACTGGTAGCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp TCTGACTCGCGAGCGTGCCGAAGGATGTGGTGTTGCTaGTGCTCCCAAACCCGAATCCTCCTGCGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SDSRACRRMWCC*CSQTRILLRWQ
Trigger: CTGCCAGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp ACAGGAGAAGCAGCACGCCAACCCTCTCACTCCTGCTaGTGCGCTCCAGCATCTTGCACGGAGGGGAAGGGT +
Preference number: 6 (lower is better)
Translates to: TGEAARQPSHSC*CAPASCTEGKG
Trigger: ACCCTTCCCCTCCGTGCAAGATGCTGGAGCGCAGCAGCAGGAGTGAGAGGGTTGGCGTGCTGCTTCTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CCA 72 bp GGCCGGGAGCAACAATGGACGTGGTGCTGGAGGCTATaGGGGTACTTGATGTTTCGACGGCCACAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GREQQWTWCWRL*GYLMFRRPQGL
Trigger: CAGGCCCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS CCA 72 bp TACCAGTCTGCTGCCCAAACAGACTTGGTGCGGTGCTaGCTGCCACTTGCCCAAACACGGGCGTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: YQSAAQTDLVRC*LPLAQTRAWQR
Trigger: CCTCTGCCACGCCCGTGTTTGGGCAAGTGGCAGCCAGCACCGCACCAAGTCTGTTTGGGCAGCAGACTGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000650694.1
ENST00000652454.1
CDS CCA 72 bp TGGGGGCATTCTGACTCGCGAGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAAACCTGCGCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: WGHSDSRACRRM*CCCCSQTCAPV
Trigger: CACTGGAGCGCAGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS TCA 72 bp GACACTTGCAGCACTGCTCGCCGACTGCCCAAAGACTaGGGCCTGCCCGAAGGTTGTCTGTCCAAAGACCCC +
Preference number: 6 (lower is better)
Translates to: DTCSTARRLPKD*GLPEGCLSKDP
Trigger: GGGGTCTTTGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp CATTCTGACTCGCGAGCGTGCCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCCGAATCCTCCTGCGCTGG +
Preference number: 6 (lower is better)
Translates to: HSDSRACRRMWC*CCSQTRILLRW
Trigger: CCAGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000476004.5
ENST00000483497.6
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp GAAACAGGAGAAGCAGCACGCCAACCCTCTCACTCCTaGTGCTGCGCTCCAGCATCTTGCACGGAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: ETGEAARQPSHS*CCAPASCTEGK
Trigger: CTTCCCCTCCGTGCAAGATGCTGGAGCGCAGCAGCAGGAGTGAGAGGGTTGGCGTGCTGCTTCTCCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CCA 72 bp TGCCTCCGTCCTGGCATCAGGGACCCCCGTGGTGGCTaGGGTAGCCTCTGCAGAAAGTGCTACAAGACTAGT +
Preference number: 6 (lower is better)
Translates to: CLRPGIRDPRGG*GSLCRKCYKTS
Trigger: ACTAGTCTTGTAGCACTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTCCCTGATGCCAGGACGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS CAA 72 bp TCGCCGACTGCCCAAAGACTGAGGCCTGCCCGAAGGTaGTCTGTCCAAAGACCCCTGGGGCTGTGGTACCAA +
Preference number: 6 (lower is better)
Translates to: SPTAQRLRPARR*SVQRPLGLWYQ
Trigger: TTGGTACCACAGCCCCAGGGGTCTTTGGACAGACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS CAA 90 bp GCCACTTGCCCAAACACGGGCGTGGCAGAGGGGGCAGTGGCTGTGTaGTTGGTGAGCTGGTTGAAAGCTGAGCTAGAACTGGCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: ATCPNTGVAEGAVAV*LVSWLKAELELAAG
Trigger: TCCTGCTGCCAGTTCTAGCTCAGCTTTCAACCAGCTCACCAACAACACAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGGGCAAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS TCA 72 bp TCGGCTGGGTTGGGGAGAGCTTCTGGGGTCTGGAGGTaGCTAGGTGAGGGAAACGGATCAGTGGTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: SAGLGRASGVWR*LGEGNGSVVSG
Trigger: CCCAGAAACCACTGATCCGTTTCCCTCACCTAGTCACCTCCAGACCCCAGAAGCTCTCCCCAACCCAGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS TCA 72 bp AGGCCCAGCTCACTGGCAGGCGTGCTCTTTTCTCTTTaGACCACGCCTCTTAAGAAGGCGAGGCCTGGCACC +
Preference number: 6 (lower is better)
Translates to: RPSSLAGVLFSL*TTPLKKARPGT
Trigger: GGTGCCAGGCCTCGCCTTCTTAAGAGGCGTGGTTCAAAGAGAAAAGAGCACGCCTGCCAGTGAGCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS GCA 72 bp CCTCTGCAGATGGGCCGGGAGCAACAATGGACGTGGTaGTGGAGGCTATGGGGGTACTTGATGTTTCGACGG +
Preference number: 6 (lower is better)
Translates to: PLQMGREQQWTW*WRLWGYLMFRR
Trigger: CCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCCCATCTGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS GCA 72 bp GTGATCCGAAAGTGGGGGCATTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGCTGCTGCTCCCAAACC +
Preference number: 6 (lower is better)
Translates to: VIRKWGHSDSRA*RRMWCCCCSQT
Trigger: GGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000476004.5
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS CCA 72 bp TGGTCCAGAAGCAGCTGGCTTGGAGGCAGAAGAGAATaGCGACATCGGGGGTGCGCTCTGGGAGCTACTAAC +
Preference number: 6 (lower is better)
Translates to: WSRSSWLGGRRE*RHRGCALGATN
Trigger: GTTAGTAGCTCCCAGAGCGCACCCCCGATGTCGCCATTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000525980.5
ENST00000651022.1
CDS CCA 72 bp CTGCAGATGGGCCGGGAGCAACAATGGACGTGGTGCTaGAGGCTATGGGGGTACTTGATGTTTCGACGGCCA +
Preference number: 6 (lower is better)
Translates to: LQMGREQQWTWC*RLWGYLMFRRP
Trigger: TGGCCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCCCATCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS CCA 72 bp GGTTTGCTTCCCCCACCAGATGAGAATGCGTCCGGCTaGCTTGACTCTTTAGTGGAGGGTGTTGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: GLLPPPDENASG*LDSLVEGVAPG
Trigger: GCCAGGGGCAACACCCTCCACTAAAGAGTCAAGCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGCAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531600.1
CDS CAA 90 bp CTGGCTTTGCCGCTGGAGGGGTTATCCTGGGTGATTTCTGTACCATaGAGGGCACTGGGCTTGAACTGCCCTGAGCAGATCGTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: LALPLEGLSWVISVP*RALGLNCPEQIVLL
Trigger: CAGCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCACCCAGGATAACCCCTCCAGCGGCAAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS CAA 90 bp CGCTCCAGTGAGAAACAGACTGAGGTCAGTGGGGCCTCTCACCACTaGCCCATCTGCAAGCCTCAGCCCCCTGCTGTAAGTCCCAATACA +
Preference number: 6 (lower is better)
Translates to: RSSEKQTEVSGASHH*PICKPQPPAVSPNT
Trigger: TGTATTGGGACTTACAGCAGGGGGCTGAGGCTTGCAGATGGGCAAGTGGTGAGAGGCCCCACTGACCTCAGTCTGTTTCTCACTGGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS TCA 72 bp CAGCAGGAGGCTGAGCAAAGACGGATGAGCCAGAAGTaGCGGTACCAAATGCTGCTGCCTCTGCAGATGGGC +
Preference number: 6 (lower is better)
Translates to: QQEAEQRRMSQK*RYQMLLPLQMG
Trigger: GCCCATCTGCAGAGGCAGCAGCATTTGGTACCGTCACTTCTGGCTCATCCGTCTTTGCTCAGCCTCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS TCA 72 bp GTCTGTTGGGACAGTGATCCGAAAGTGGGGGCATTCTaGCTCGCGAGCGTGCCGAAGGATGTGGTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: VCWDSDPKVGAF*LASVPKDVVLL
Trigger: CAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS GCA 72 bp GGCATCAGGGACCCCCGTGGTGGCTGGGGTAGCCTCTaGAGAAAGTGCTACAAGACTAGTACTAGATGCTGC +
Preference number: 6 (lower is better)
Translates to: GIRDPRGGWGSL*RKCYKTSTRCC
Trigger: GCAGCATCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCTACCCCAGCCACCACGGGGGTCCCTGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS GCA 72 bp GTGATCCGAAAGTGGGGGCATTCTGACTCGCGAGCGTaGCGAAGGATGTGGTGTTGCTGCTGCTCCCAAACT +
Preference number: 6 (lower is better)
Translates to: VIRKWGHSDSRA*RRMWCCCCSQT
Trigger: AGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS GCA 72 bp CATTCTGACTCGCGAGCGTGCCGAAGGATGTGGTGTTaGTGCTGCTCCCAAACCTGCGCTCCAGTGAGAAAC +
Preference number: 6 (lower is better)
Translates to: HSDSRACRRMWC*CCSQTCAPVRN
Trigger: GTTTCTCACTGGAGCGCAGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CCA 72 bp GAGGCAGAAGAGAATGGCGACATCGGGGGTGCGCTCTaGGAGCTACTAACAGGAGTAGAGGTAGCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: EAEENGDIGGAL*ELLTGVEVAAA
Trigger: TGCTGCAGCTACCTCTACTCCTGTTAGTAGCTCCCAGAGCGCACCCCCGATGTCGCCATTCTCTTCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000525980.5
ENST00000651022.1
CDS CCA 72 bp GCAGACTGCCAAAAACGGCAGTTGAGGAAGTGCTGGTaGCTGCTGGTGGTGCTACTGAGGTGGTGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: ADCQKRQLRKCW*LLVVLLRWWLQ
Trigger: CTGCAACCACCACCTCAGTAGCACCACCAGCAGCCACCAGCACTTCCTCAACTGCCGTTTTTGGCAGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000483497.6
ENST00000525384.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 72 bp CTGCCTCTGCAGATGGGCCGGGAGCAACAATGGACGTaGTGCTGGAGGCTATGGGGGTACTTGATGTTTCGA +
Preference number: 6 (lower is better)
Translates to: LPLQMGREQQWT*CWRLWGYLMFR
Trigger: TCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTGCTCCCGGCCCATCTGCAGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS CCA 72 bp TGGTCCAGAAGCAGCTGGCTTGGAGGCAGAAGAGAATaGCGACATCGGGGGTGCGCTCTGGGAGCTATTTTC +
Preference number: 6 (lower is better)
Translates to: WSRSSWLGGRRE*RHRGCALGAIF
Trigger: GAAAATAGCTCCCAGAGCGCACCCCCGATGTCGCCATTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS CCA 72 bp TGGTCCAGAAGCAGCTGGCTTGGAGGCAGAAGAGAATaGCGACATCGGGGGTGCGCTCTGGGAGTTTTCACT +
Preference number: 6 (lower is better)
Translates to: WSRSSWLGGRRE*RHRGCALGVFT
Trigger: AGTGAAAACTCCCAGAGCGCACCCCCGATGTCGCCATTCTCTTCTGCCTCCAAGCCAGCTGCTTCTGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652454.1
CDS CAA 72 bp GGCTGCAGCTGCAGAAGCATCCAGTTTCTGTGGGGCTaGAGAGGAGGTTGGGGTAGTGGGAGTACTTCCTGG +
Preference number: 6 (lower is better)
Translates to: GCSCRSIQFLWG*RGGWGSGSTSW
Trigger: CCAGGAAGTACTCCCACTACCCCAACCTCCTCTCAAGCCCCACAGAAACTGGATGCTTCTGCAGCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000652454.1
CDS CAA 72 bp CCAAACACGGGCGTGGCAGAGGGGGCAGTGGCTGTGTaGTTGGTGAGCTGGTTGAAAGCTGAGCTAGAACTG +
Preference number: 6 (lower is better)
Translates to: PNTGVAEGAVAV*LVSWLKAELEL
Trigger: CAGTTCTAGCTCAGCTTTCAACCAGCTCACCAACAACACAGCCACTGCCCCCTCTGCCACGCCCGTGTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS CAA 90 bp CTGGCTTTGCCGCTGGAGGGGTTATCCTGGGTGATTTCTGTACCATaGAGGGCACTGGGCTTGAACTGCCCTGAGCAGATCGTCCTGATG +
Preference number: 6 (lower is better)
Translates to: LALPLEGLSWVISVP*RALGLNCPEQIVLM
Trigger: CATCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCACCCAGGATAACCCCTCCAGCGGCAAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000651022.1
ENST00000652454.1
CDS TCA 72 bp CGGCAGGTTCTCCTGGGGTGGTGTTTGATGCGGATGTaGTTCCTGAGGGAGGTGAGCTTTCAGGAATGGCCT +
Preference number: 6 (lower is better)
Translates to: RQVLLGWCLMRM*FLREVSFQEWP
Trigger: AGGCCATTCCTGAAAGCTCACCTCCCTCAGGAATCACATCCGCATCAAACACCACCCCAGGAGAACCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000651334.1
ENST00000652454.1
CDS TCA 72 bp GCTAGAACTGGCAGCAGGAGGCTGAGCAAAGACGGATaGGCCAGAAGTGACGGTACCAAATGCTGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: ARTGSRRLSKDG*ARSDGTKCCCL
Trigger: GAGGCAGCAGCATTTGGTACCGTCACTTCTGGCTCATCCGTCTTTGCTCAGCCTCCTGCTGCCAGTTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS TCA 72 bp AGAAGCACAGAGGGTGGATCAACACATGAGACCTGGTaGTGGCCCAGAGCCCAGGGGTTAGCATGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: RSTEGGSTHETW*WPRAQGLACSF
Trigger: GAAGCTGCATGCTAACCCCTGGGCTCTGGGCCATCACCAGGTCTCATGTGTTGATCCACCCTCTGTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS GCA 72 bp CTGAAGGAAAAGACACTTGCAGCACTGCTCGCCGACTaGCCAAAGACTGAGGCCTGCCCGAAGGTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: LKEKTLAALLAD*PKTEACPKVVC
Trigger: ACAGACAACCTTCGGGCAGGCCTCAGTCTTTGGGCAGTCGGCGAGCAGTGCTGCAAGTGTCTTTTCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS CCA 72 bp GGTTTGCTTCCCCCACCAGATGAGAATGCGTCCGGCTaGCTTGACTCTTTAGTGGAGGGTGTTGCCCCTTGT +
Preference number: 6 (lower is better)
Translates to: GLLPPPDENASG*LDSLVEGVAPC
Trigger: ACAAGGGGCAACACCCTCCACTAAAGAGTCAAGCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000470765.5
ENST00000483497.6
ENST00000528114.1
ENST00000531929.5
ENST00000651334.1
ENST00000652454.1
CDS CAA 72 bp CCGCTGGAGGGGTTATCCTGGGTGATTTCTGTACCATaGAGGGCACTGGGCTTGAACTGCCCTGAGCAGATC +
Preference number: 6 (lower is better)
Translates to: PLEGLSWVISVP*RALGLNCPEQI
Trigger: GATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCACCCAGGATAACCCCTCCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000651022.1
ENST00000652454.1
CDS CAA 72 bp CAACAATGGACGTGGTGCTGGAGGCTATGGGGGTACTaGATGTTTCGACGGCCACAGGGCCTGCACTTGAGA +
Preference number: 6 (lower is better)
Translates to: QQWTWCWRLWGY*MFRRPQGLHLR
Trigger: TCTCAAGTGCAGGCCCTGTGGCCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCACCACGTCCATTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000531600.1
ENST00000652454.1
CDS CAA 90 bp GAGGGGTTATCCTGGGTGATTTCTGTACCATTGAGGGCACTGGGCTaGAACTGCCCTGAGCAGATCGTCCTGATGGTGAGGGCAAGACTG +
Preference number: 6 (lower is better)
Translates to: EGLSWVISVPLRALG*NCPEQIVLMVRARL
Trigger: CAGTCTTGCCCTCACCATCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCACCCAGGATAACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000651022.1
ENST00000652454.1
CDS CAA 90 bp GACAGGCTGGCTGGAGCAGTGGATCTCACTGGTGGGGTCTTCCTCTaGGCCAAGAAGTTTCTCAGTTGTGCCTGTTTCATGGGGGACAGT +
Preference number: 6 (lower is better)
Translates to: DRLAGAVDLTGGVFL*AKKFLSCACFMGDS
Trigger: ACTGTCCCCCATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGCCAGCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS CAA 90 bp GAGGGGTTATCCTGGGTGATTTCTGTACCATTGAGGGCACTGGGCTaGAACTGCCCTGAGCAGATCGTCCTGCTGATGGTGAGGGCAAGA +
Preference number: 6 (lower is better)
Translates to: EGLSWVISVPLRALG*NCPEQIVLLMVRAR
Trigger: TCTTGCCCTCACCATCAGCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCACCCAGGATAACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS TCA 72 bp TTCTGTACCATTGAGGGCACTGGGCTTGAACTGCCCTaGGCAGATCGTCCTGATGGTGAGGGCAAGACTGAG +
Preference number: 6 (lower is better)
Translates to: FCTIEGTGLELP*ADRPDGEGKTE
Trigger: CTCAGTCTTGCCCTCACCATCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000651022.1
ENST00000652454.1
CDS TCA 72 bp TGGCTGCATCCTGACTGGGTTTTCCTCCAAGGCCACTaGAGAAACCTCCCCCTCTTCCAGTGTTTCCAGACC +
Preference number: 6 (lower is better)
Translates to: WLHPDWVFLQGH*RNLPLFQCFQT
Trigger: GGTCTGGAAACACTGGAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 72 bp CAAAGCCTTGGGATGCCACACTTCCTCCTCCAGAGCTaGAAGTGCCAGTGGGTTTCTGCTCTCCAAACGACG +
Preference number: 6 (lower is better)
Translates to: QSLGMPHFLLQS*KCQWVSALQTT
Trigger: CGTCGTTTGGAGAGCAGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATCCCAAGGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000530491.1
ENST00000650694.1
ENST00000652454.1
CDS TCA 72 bp ACTCTGGGTCCCAAAACCAGAAGTCTGTTGGGACAGTaGTCCGAAAGTGGGGGCATTCTGACTCGCGAGCGT +
Preference number: 6 (lower is better)
Translates to: TLGPKTRSLLGQ*SESGGILTRER
Trigger: ACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAACAGACTTCTGGTTTTGGGACCCAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS TCA 72 bp TTCTGTACCATTGAGGGCACTGGGCTTGAACTGCCCTaGGCAGATCGTCCTGCTGATGGTGAGGGCAAGACT +
Preference number: 6 (lower is better)
Translates to: FCTIEGTGLELP*ADRPADGEGKT
Trigger: AGTCTTGCCCTCACCATCAGCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS GCA 72 bp GAGGTGAGCTTTCAGGAATGGCCTCATAAGAAGGTTTaGTTCCCCCACCAGATGAGAATGCGTCCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: EVSFQEWPHKKV*FPHQMRMRPAG
Trigger: GCCAGCCGGACGCATTCTCATCTGGTGGGGGAAGCAAACCTTCTTATGAGGCCATTCCTGAAAGCTCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000531929.5
ENST00000651334.1
ENST00000652454.1
CDS GCA 72 bp GTGATTTCTGTACCATTGAGGGCACTGGGCTTGAACTaGCCTGAGCAGATCGTCCTGCTGATGGTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: VISVPLRALGLN*PEQIVLLMVRA
Trigger: TGCCCTCACCATCAGCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411637.6
CDS GCA 72 bp ACTCGAAAGACAAAGGTGGTCCCCATGCTAAGTGTCTaGCCTCCTCTGTGCTTCTTGTGGGAAGCCCTCCGT +
Preference number: 6 (lower is better)
Translates to: TRKTKVVPMLSV*PPLCFLWEALR
Trigger: ACGGAGGGCTTCCCACAAGAAGCACAGAGGAGGGCAGACACTTAGCATGGGGACCACCTTTGTCTTTCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650694.1
CDS CCA 72 bp TCGAGACAGGCTGGCTGGAGCAGTGGATCTCACTGGTaGGGTCTTCCTCTTGGCCAAGAAGTTTCTCAGTTG +
Preference number: 6 (lower is better)
Translates to: SRQAGWSSGSHW*GLPLGQEVSQL
Trigger: CAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGCCAGCCTGTCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS CCA 72 bp CAAAACCAGAAGTCTGTTGGGACAGTGATCCGAAAGTaGGGGCATTCTGACTCGCGAGCGTGCCGAAGGATG +
Preference number: 6 (lower is better)
Translates to: QNQKSVGTVIRK*GHSDSRACRRM
Trigger: CATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTGTCCCAACAGACTTCTGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS CCA 72 bp TGGGGGCATTCTGACTCGCGAGCGTGCCGAAGGATGTaGTGTTGCTGCTGCTCCCAAACTTTTAATGGTGAG +
Preference number: 6 (lower is better)
Translates to: WGHSDSRACRRM*CCCCSQTFNGE
Trigger: CTCACCATTAAAAGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS CAA 72 bp CTTTCCATACAAAGGTGGCCAAGGGATCTGCTCTCATaGGACTTTCTCCCAGGAGCGGCCTGCTCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: LSIQRWPRDLLS*DFLPGAACSLP
Trigger: AGGAAGGGAGCAGGCCGCTCCTGGGAGAAAGTCCAATGAGAGCAGATCCCTTGGCCACCTTTGTATGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453861.6
ENST00000496921.2
CDS CAA 72 bp AAGGTGGCACTGTGTGACCTATCAGAGCCCCTTGAATaGTTTGCAGAGGAACTCGGCTGGGTTGGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: KVALCDLSEPLE*FAEELGWVGES
Trigger: GCTCTCCCCAACCCAGCCGAGTTCCTCTGCAAACAATTCAAGGGGCTCTGATAGGTCACACAGTGCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CAA 72 bp CACACAAGGTGGCACTGTGTGACCTATCAGAGCCCCTaGAATTGTTTGCAGAGGAACTCGGCTGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: HTRWHCVTYQSP*NCLQRNSAGLG
Trigger: CCCCAACCCAGCCGAGTTCCTCTGCAAACAATTCAAGGGGCTCTGATAGGTCACACAGTGCCACCTTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CAA 90 bp ATGGTCCAGCACACAAGGTGGCACTGTGTGACCTATCAGAGCCCCTaGAATTGTTTGCAGAGGAACTCGGCTGGGTTGGGGAGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: MVQHTRWHCVTYQSP*NCLQRNSAGLGRAS
Trigger: AGAAGCTCTCCCCAACCCAGCCGAGTTCCTCTGCAAACAATTCAAGGGGCTCTGATAGGTCACACAGTGCCACCTTGTGTGCTGGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CAA 90 bp GAACCACGCCTCTTAAGAAGGCGAGGCCTGGCACCTCCTGCCATATaGCTACAGAGAAGAGCAAGTCCACAAAACCCAAACCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: EPRLLRRRGLAPPAI*LQRRASPQNPNPAA
Trigger: AGCAGCAGGGTTTGGGTTTTGTGGACTTGCTCTTCTCTGTAGCAATATGGCAGGAGGTGCCAGGCCTCGCCTTCTTAAGAGGCGTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS TCA 72 bp ACAAGCCGCCTAGAAGCCAAGGGAGCGGAGCGACAGTaGCAGCAACAGGTACTTTCTCTGATTTTCACGCAC +
Preference number: 6 (lower is better)
Translates to: TSRLEAKGAERQ*QQQVLSLIFTH
Trigger: GTGCGTGAAAATCAGAGAAAGTACCTGTTGCTGTCACTGTCGCTCCGCTCCCTTGGCTTCTAGGCGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS TCA 72 bp CTCTACGTTAACGACTACTTCGTAGGGCTGCCGCGATaGCTACCACAGTGCCTGGCACACAGTCAACACTCA +
Preference number: 6 (lower is better)
Translates to: LYVNDYFVGLPR*LPQCLAHSQHS
Trigger: TGAGTGTTGACTGTGTGCCAGGCACTGTGGTAGTCATCGCGGCAGCCCTACGAAGTAGTCGTTAACGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651639.1
CDS GCA 72 bp CATCACCACATCTGGAGACGTTTCCAGGGTCCCATCTaGAGCAGCATACACTATGGCGAAGACGTAGGTACC +
Preference number: 6 (lower is better)
Translates to: HHHIWRRFQGPI*SSIHYGEDVGT
Trigger: GGTACCTACGTCTTCGCCATAGTGTATGCTGCTGCAGATGGGACCCTGGAAACGTCTCCAGATGTGGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000525561.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS GCA 72 bp GTGATTTCTGTACCATTGAGGGCACTGGGCTTGAACTaGCCTGAGCAGATCGTCCTGATGGTGAGGGCAAGA +
Preference number: 6 (lower is better)
Translates to: VISVPLRALGLN*PEQIVLMVRAR
Trigger: TCTTGCCCTCACCATCAGGACGATCTGCTCAGGGCAGTTCAAGCCCAGTGCCCTCAATGGTACAGAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359428.10
ENST00000451030.5
ENST00000651022.1
ENST00000652454.1
CDS GCA 72 bp AGCCTCTGCAGAAAGTGCTACAAGACTAGTACTAGATaGTGCAGTGCCAGAGTTGCTGACTGCAGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SLCRKCYKTSTR*CSARVADCRLG
Trigger: GCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTTGTAGCACTTTCTGCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS GCA 72 bp TCTGACTCGCGAGCGTGCCGAAGGATGTGGTGTTGCTaGTGCTCCCAAACTTTTAATGGTGAGGTCAAGGCT +
Preference number: 6 (lower is better)
Translates to: SDSRACRRMWCC*CSQTFNGEVKA
Trigger: AGCCTTGACCTCACCATTAAAAGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453861.6
CDS CAA 72 bp GTTCCATTCTGTTTTCCCACTGCCAGCTGCTTTCCTTaGGGGCTCCAGCACACAGAGGTTACTGCTACCGTG +
Preference number: 6 (lower is better)
Translates to: VPFCFPTASCFP*GLQHTEVTATV
Trigger: CACGGTAGCAGTAACCTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGGCAGTGGGAAAACAGAATGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CAA 72 bp CCAGCCAAAGAACTTGGAAACAGAAGCTCTCCCAGCTaGGACGGTGGGGTTTCCAGCTTACTAGAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: PAKELGNRSSPS*DGGVSSLLEVV
Trigger: CACCACCTCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS CAA 72 bp TGGCACTGTGTGACCTATCAGAGCCCCTTGAATTGTTaGCAGAGGAACTCGGCTGGGTTGGGGAGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: WHCVTYQSPLNC*QRNSAGLGRAS
Trigger: AGAAGCTCTCCCCAACCCAGCCGAGTTCCTCTGCAAACAATTCAAGGGGCTCTGATAGGTCACACAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CAA 90 bp TGGGAGAAGACTGTCCAAATGAGAAGGAACTGGAGCTACTGGTACTaGAGGCGGCACCAAAGACACTTCCACTGGTGGATGTGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: WEKTVQMRRNWSYWY*RRHQRHFHWWMWEW
Trigger: CCACTCCCACATCCACCAGTGGAAGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTGGACAGTCTTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 72 bp GAAAGGCTTGCTGAACTGCCCAGAAGCAGATGGGGTTaGAGTCACAGCTGTTTCTATCTTGGCTGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: ERLAELPRSRWG*SHSCFYLGCPW
Trigger: CCAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465486.6
ENST00000483497.6
CDS TCA 72 bp GAAAGGCTTGCTGAACTGCCCAGAAGCAGATGGGGTTaGAGTCACAGCTGTTTCTATCTTGGCTGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: ERLAELPRSRWG*SHSCFYLGCPS
Trigger: GGAGGGACAGCCAAGATAGAAACAGCTGTGACTTCAACCCCATCTGCTTCTGGGCAGTTCAGCAAGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528114.1
CDS GCA 72 bp TGGACCACAGTTCCATTCTGTTTTCCCACTGCCAGCTaGTTTCCTTTGGGGCTCCAGCACACAGAGGTTACT +
Preference number: 6 (lower is better)
Translates to: WTTVPFCFPTAS*FPLGLQHTEVT
Trigger: AGTAACCTCTGTGTGCTGGAGCCCCAAAGGAAAGCAGCTGGCAGTGGGAAAACAGAATGGAACTGTGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 72 bp ACGTTTCCAGGGTCCCATCTGCAGCAGCATACACTATaGCGAAGACGTAGGTACCAATCCACAGCACATCCA +
Preference number: 6 (lower is better)
Translates to: TFPGSHLQQHTL*RRRRYQSTAHP
Trigger: TGGATGTGCTGTGGATTGGTACCTACGTCTTCGCCATAGTGTATGCTGCTGCAGATGGGACCCTGGAAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000525561.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 72 bp AGAACTTGGAAACAGAAGCTCTCCCAGCTTGGACGGTaGGGTTTCCAGCTTACTAGAGGTGGTGGAAAGAGC +
Preference number: 6 (lower is better)
Translates to: RTWKQKLSQLGR*GFQLTRGGGKS
Trigger: GCTCTTTCCACCACCTCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCTGTTTCCAAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 72 bp AAGTGCCAGTGGGTTTCTGCTCTCCAAACGACGAGCTaGCAAATCCACCAAATGTCTTGGCCCCACTGTTTC +
Preference number: 6 (lower is better)
Translates to: KCQWVSALQTTS*QIHQMSWPHCF
Trigger: GAAACAGTGGGGCCAAGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000530491.1
ENST00000650694.1
ENST00000652454.1
CDS CAA 72 bp GCTGGAGCAGTGGATCTCACTGGTGGGGTCTTCCTCTaGGCCAAGAAGTTTCTCAGTTGTGCCTGTTTCATG +
Preference number: 6 (lower is better)
Translates to: AGAVDLTGGVFL*AKKFLSCACFM
Trigger: CATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS CAA 72 bp CCTGGAGCAGTGGATCTCACTGGTGGGGTCTTCCTCTaGGCCAAGAAGTTTCTCAGTTGTGCCTGTTTCATG +
Preference number: 6 (lower is better)
Translates to: PGAVDLTGGVFL*AKKFLSCACFM
Trigger: CATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CAA 90 bp AAAATCTGCAAGCCACTGGCTCCACCAGCGAAGACCAGACCATATTaGTTGGACACAGCAAGCAGACTCGAGCGTTCCTTGGGCAATTCC +
Preference number: 6 (lower is better)
Translates to: KICKPLAPPAKTRPY*LDTASRLERSLGNS
Trigger: GGAATTGCCCAAGGAACGCTCGAGTCTGCTTGCTGTGTCCAACAAATATGGTCTGGTCTTCGCTGGTGGAGCCAGTGGCTTGCAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000531584.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CAA 90 bp GGATCTCACTGGTGGGGTCTTCCTCTTGGCCAAGAAGTTTCTCAGTaGTGCCTGTTTCATGGGGGACAGTTTGGCTGGTACTTTGGGCAA +
Preference number: 6 (lower is better)
Translates to: GSHWWGLPLGQEVSQ*CLFHGGQFGWYFGQ
Trigger: TTGCCCAAAGTACCAGCCAAACTGTCCCCCATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000489260.1
ENST00000525980.5
ENST00000652454.1
CDS CAA 90 bp AGAGTCTCTCCAGCCAAAGAACTTGGAAACAGAAGCTCTCCCAGCTaGGACGGTGGGGTTTCCAGCTTACTAGAGGTGGTGGAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: RVSPAKELGNRSSPS*DGGVSSLLEVVERA
Trigger: TGCTCTTTCCACCACCTCTAGTAAGCTGGAAACCCCACCGTCCAAGCTGGGAGAGCTTCTGTTTCCAAGTTCTTTGGCTGGAGAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS CAA 90 bp TTCTCTTTACCTGGAGCAGTGGATCTCACTGGTGGGGTCTTCCTCTaGGCCAAGAAGTTTCTCAGTTGTGCCTGTTTCATGGGGGACAGT +
Preference number: 6 (lower is better)
Translates to: FSLPGAVDLTGGVFL*AKKFLSCACFMGDS
Trigger: ACTGTCCCCCATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS TCA 72 bp AAAGCCAGTCCTGAAGCTTTGTCACCAGATGATAACTaGCCGGATGCTGGTGTAGGCCCAGATGGCTTAAGG +
Preference number: 6 (lower is better)
Translates to: KASPEALSPDDN*PDAGVGPDGLR
Trigger: CCTTAAGCCATCTGGGCCTACACCAGCATCCGGTCAGTTATCATCTGGTGACAAAGCTTCAGGACTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470765.5
CDS GCA 72 bp CATCCCCCATTGGAACACCAGGGCATTTGGGAACTATaGAGTACACAGTTCCTGCTCTACCTCCAACAATCC +
Preference number: 6 (lower is better)
Translates to: HPPLEHQGIWEL*STQFLLYLQQS
Trigger: GGATTGTTGGAGGTAGAGCAGGAACTGTGTACTGCATAGTTCCCAAATGCCCTGGTGTTCCAATGGGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CCA 72 bp CTTTGGGGCTCCAGCACACAGAGGTTACTGCTACCGTaGAAGGAAGAGTTGCACATACTTTCACTGTTTCCG +
Preference number: 6 (lower is better)
Translates to: LWGSSTQRLLLP*KEELHILSLFP
Trigger: CGGAAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGGTAGCAGTAACCTCTGTGTGCTGGAGCCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 72 bp TTACAGGACGTCCGTGCATCTTCACTCTCCAGAGACTaGGAGACAGATGACGTTGAGCTGACTTCATCCAAG +
Preference number: 6 (lower is better)
Translates to: LQDVRASSLSRD*ETDDVELTSSK
Trigger: CTTGGATGAAGTCAGCTCAACGTCATCTGTCTCCCAGTCTCTGGAGAGTGAAGATGCACGGACGTCCTGTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS CCA 72 bp TTAAACCCTGAGGGCACGCCTGACGTCTTGGTTGGCTaGGTACTAGTTAGGCTTGTGGATGAAGCCTTATTG +
Preference number: 6 (lower is better)
Translates to: LNPEGTPDVLVG*VLVRLVDEALL
Trigger: CAATAAGGCTTCATCCACAAGCCTAACTAGTACCCAGCCAACCAAGACGTCAGGCGTGCCCTCAGGGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 72 bp GAGAAGACTGTCCAAATGAGAAGGAACTGGAGCTACTaGTACTTGAGGCGGCACCAAAGACACTTCCACTGG +
Preference number: 6 (lower is better)
Translates to: EKTVQMRRNWSY*YLRRHQRHFHW
Trigger: CCAGTGGAAGTGTCTTTGGTGCCGCCTCAAGTACCAGTAGCTCCAGTTCCTTCTCATTTGGACAGTCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS CCA 72 bp CCTGTGCCTGATCCAAAACCAGAGAATCCGCTACTCTaGGTCCCAAAACCAGAAGTCTGTTGGGACAGTGAT +
Preference number: 6 (lower is better)
Translates to: PVPDPKPENPLL*VPKPEVCWDSD
Trigger: ATCACTGTCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTCTGGTTTTGGATCAGGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000476004.5
ENST00000483497.6
ENST00000496921.2
ENST00000498010.2
ENST00000528406.1
ENST00000650694.1
ENST00000652454.1
CDS CCA 72 bp CTGGTTCTCTTTACCTGGAGCAGTGGATCTCACTGGTaGGGTCTTCCTCTTGGCCAAGAAGTTTCTCAGTTG +
Preference number: 6 (lower is better)
Translates to: LVLFTWSSGSHW*GLPLGQEVSQL
Trigger: CAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CAA 72 bp CTCTTAAGAAGGCGAGGCCTGGCACCTCCTGCCATATaGCTACAGAGAAGAGCAAGTCCACAAAACCCAAAC +
Preference number: 6 (lower is better)
Translates to: LLRRRGLAPPAI*LQRRASPQNPN
Trigger: GTTTGGGTTTTGTGGACTTGCTCTTCTCTGTAGCAATATGGCAGGAGGTGCCAGGCCTCGCCTTCTTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS TCA 72 bp CCCCGGTCGAGAAGTGCTAGATACCTCCTTCTCATGTaGGGCGTACATGATACCAACTGTGGTTCCATATCA +
Preference number: 6 (lower is better)
Translates to: PRSRSARYLLLM*GVHDTNCGSIS
Trigger: TGATATGGAACCACAGTTGGTATCATGTACGCCTCACATGAGAAGGAGGTATCTAGCACTTCTCGACCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483497.6
CDS GCA 72 bp GCACACAGAGGTTACTGCTACCGTGGAAGGAAGAGTTaGACATACTTTCACTGTTTCCGTGACTTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: AHRGYCYRGRKS*TYFHCFRDLQD
Trigger: GTCCTGCAAGTCACGGAAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGGTAGCAGTAACCTCTGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS GCA 72 bp TGGGGTCTTCCTCTTGGCCAAGAAGTTTCTCAGTTGTaGCTGTTTCATGGGGGACAGTTTGGCTGGTACTTT +
Preference number: 6 (lower is better)
Translates to: WGLPLGQEVSQL*LFHGGQFGWYF
Trigger: AAAGTACCAGCCAAACTGTCCCCCATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGAGGAAGACCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000489260.1
ENST00000525980.5
ENST00000652454.1
CDS GCA 72 bp TGTTTTGTTTGGAGAGGAAAACCCAAAGCCTTGGGATaGCACACTTCCTCCTCCAGAGCTGAAAGTGCCAGT +
Preference number: 6 (lower is better)
Translates to: CFVWRGKPKALG*HTSSSRAESAS
Trigger: ACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATCCCAAGGCTTTGGGTTTTCCTCTCCAAACAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000530491.1
ENST00000650694.1
ENST00000652454.1
CDS CCA 72 bp GGAGGGCTTCATTGCTATATTTGGAGCAGACACACTTaGCACTGGTGTGCTTTCCAGGGTAGGCTTAAAACC +
Preference number: 6 (lower is better)
Translates to: GGLHCYIWSRHT*HWCAFQGRLKT
Trigger: GGTTTTAAGCCTACCCTGGAAAGCACACCAGTGCCAAGTGTGTCTGCTCCAAATATAGCAATGAAGCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000530863.1
ENST00000651022.1
ENST00000652454.1
CDS CCA 72 bp TTACTGGTTCTCTTTACCTGGAGCAGTGGATCTCACTaGTGGGGTCTTCCTCTTGGCCAAGAAGTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: LLVLFTWSSGSH*WGLPLGQEVSQ
Trigger: CTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCAGTGAGATCCACTGCTCCAGGTAAAGAGAACCAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CCA 72 bp AGATACCCAGCCAACCCAAACCTTCTACCAACTCTGTaGTACTGTGTGCTGGTTCATCACTGCAGAGAACAG +
Preference number: 6 (lower is better)
Translates to: RYPANPNLLPTL*YCVLVHHCREQ
Trigger: CTGTTCTCTGCAGTGATGAACCAGCACACAGTACCACAGAGTTGGTAGAAGGTTTGGGTTGGCTGGGTATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CAA 72 bp TCTACGACAACTCCCATGGGCAAGGAGTCATCACTCTaGTCTGTCACAGGCAATTCAGCTCGACTAGAATCC +
Preference number: 6 (lower is better)
Translates to: STTTPMGKESSL*SVTGNSARLES
Trigger: GGATTCTAGTCGAGCTGAATTGCCTGTGACAGACAAGAGTGATGACTCCTTGCCCATGGGAGTTGTCGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000530863.1
ENST00000651022.1
ENST00000652454.1
CDS CAA 72 bp GCAGTAAAATTAAACCCTGAGGGCACGCCTGACGTCTaGGTTGGCTGGGTACTAGTTAGGCTTGTGGATGAA +
Preference number: 6 (lower is better)
Translates to: AVKLNPEGTPDV*VGWVLVRLVDE
Trigger: TTCATCCACAAGCCTAACTAGTACCCAGCCAACCAAGACGTCAGGCGTGCCCTCAGGGTTTAATTTTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000531600.1
ENST00000652454.1
CDS CAA 72 bp GCTACAAGACTAGTACTAGATGCTGCAGTGCCAGAGTaGCTGACTGCAGGCTGGGCAAGAACAGGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: ATRLVLDAAVPE*LTAGWARTGSF
Trigger: AAAAGAACCTGTTCTTGCCCAGCCTGCAGTCAGCAACTCTGGCACTGCAGCATCTAGTACTAGTCTTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000529286.1
ENST00000531600.1
ENST00000652454.1
CDS CAA 90 bp ACCAGACCATATTTGTTGGACACAGCAAGCAGACTCGAGCGTTCCTaGGGCAATTCCTCAGGGGAGTCAAAGATTCTCACCTTCTTTAGC +
Preference number: 6 (lower is better)
Translates to: TRPYLLDTASRLERS*GNSSGESKILTFFS
Trigger: GCTAAAGAAGGTGAGAATCTTTGACTCCCCTGAGGAATTGCCCAAGGAACGCTCGAGTCTGCTTGCTGTGTCCAACAAATATGGTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000531584.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CAA 90 bp GTCTTGGTTGGCTGGGTACTAGTTAGGCTTGTGGATGAAGCCTTATaGGTTGGTTTTGTAGAATCATCTGCTTGGCCAACCCGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: VLVGWVLVRLVDEAL*VGFVESSAWPTRSP
Trigger: AGGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAACCAACCAATAAGGCTTCATCCACAAGCCTAACTAGTACCCAGCCAACCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS TCA 72 bp AACCATATTCACTGGACATCATGCACGCAGAGAGTGTaGGGTTATCACAGCTCAAGGCCAGGTGATGGATTG +
Preference number: 6 (lower is better)
Translates to: NHIHWTSCTQRV*GYHSSRPGDGL
Trigger: CAATCCATCACCTGGCCTTGAGCTGTGATAACCTCACACTCTCTGCGTGCATGATGTCCAGTGAATATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000531584.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS TCA 72 bp ATCCAAGTCTTCATAATATCTCTGAGACAGAAAGGCTaGTCGAGACAGGCTGGCTGGAGCAGTGGATCTCAC +
Preference number: 6 (lower is better)
Translates to: IQVFIISLRQKG*SRQAGWSSGSH
Trigger: GTGAGATCCACTGCTCCAGCCAGCCTGTCTCGATCAGCCTTTCTGTCTCAGAGATATTATGAAGACTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS TCA 72 bp GAAAAGATTTCAACATGGGACAAGGTGACTCAGGTGTaGTCTTCCAGTGAGAGCAGGAATGCCCTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: EKISTWDKVTQV*SSSESRNALSR
Trigger: TCTGGACAGGGCATTCCTGCTCTCACTGGAAGATCACACCTGAGTCACCTTGTCCCATGTTGAAATCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525561.1
CDS CCA 72 bp TCTTGGCCAAGAAGTTTCTCAGTTGTGCCTGTTTCATaGGGGACAGTTTGGCTGGTACTTTGGGCAAGGATT +
Preference number: 6 (lower is better)
Translates to: SWPRSFSVVPVS*GTVWLVLWARI
Trigger: AATCCTTGCCCAAAGTACCAGCCAAACTGTCCCCCATGAAACAGGCACAACTGAGAAACTTCTTGGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000489260.1
ENST00000525980.5
ENST00000652454.1
CDS CCA 72 bp TTTAGTTTCCATCCCCCATTGGAACACCAGGGCATTTaGGAACTATGCAGTACACAGTTCCTGCTCTACCTC +
Preference number: 6 (lower is better)
Translates to: FSFHPPLEHQGI*ELCSTQFLLYL
Trigger: GAGGTAGAGCAGGAACTGTGTACTGCATAGTTCCCAAATGCCCTGGTGTTCCAATGGGGGATGGAAACTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CAA 90 bp TACCGTGGAAGGAAGAGTTGCACATACTTTCACTGTTTCCGTGACTaGCAGGACAGCAATACTACCATCAGCCAGACAAACTGCCACCAT +
Preference number: 6 (lower is better)
Translates to: YRGRKSCTYFHCFRD*QDSNTTISQTNCHH
Trigger: ATGGTGGCAGTTTGTCTGGCTGATGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAGTATGTGCAACTCTTCCTTCCACGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CAA 90 bp GGTTTCTGCTCTCCAAACGACGAGCTGGCAAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAATAGGTTAGAGGTATTTGAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: GFCSPNDELANPPNV*APLFPNRLEVFEVA
Trigger: AGCTACCTCAAATACCTCTAACCTATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAGAGCAGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS CAA 90 bp CAGTATGAAATCCAACCTGGCCAGTGTTTTAGTTTCCATCCCCCATaGGAACACCAGGGCATTTGGGAACTATGCAGTACACAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: QYEIQPGQCFSFHPP*EHQGIWELCSTQFL
Trigger: CAGGAACTGTGTACTGCATAGTTCCCAAATGCCCTGGTGTTCCAATGGGGGATGGAAACTAAAACACTGGCCAGGTTGGATTTCATACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS CAA 90 bp GGTTTCTGCTCTCCAAACGACGAGCTGGCAAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAATAGGTTAGAGGTATCTGAAGAGATG +
Preference number: 6 (lower is better)
Translates to: GFCSPNDELANPPNV*APLFPNRLEVSEEM
Trigger: CATCTCTTCAGATACCTCTAACCTATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAGAGCAGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS TCA 72 bp TGGAAGGAAGAGTTGCACATACTTTCACTGTTTCCGTaGCTTGCAGGACAGCAATACTACCATCAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: WKEELHILSLFP*LAGQQYYHQPD
Trigger: GTCTGGCTGATGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAGTATGTGCAACTCTTCCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS TCA 72 bp TGCAATCTCCTCCCCAATTCCAGCCATTACAGGATCTaGATCTTTCCACTGATGTCCCTGCTTTTCTGCAAC +
Preference number: 6 (lower is better)
Translates to: CNLLPNSSHYRI*IFPLMSLLFCN
Trigger: GTTGCAGAAAAGCAGGGACATCAGTGGAAAGATTCAGATCCTGTAATGGCTGGAATTGGGGAGGAGATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000530630.1
ENST00000651022.1
ENST00000652454.1
CDS CCA 72 bp TTTCCACTTGGTTTGTATAGTCTACGACAACTCCCATaGGCAAGGAGTCATCACTCTTGTCTGTCACAGGCA +
Preference number: 6 (lower is better)
Translates to: FPLGLYSLRQLP*ARSHHSCLSQA
Trigger: TGCCTGTGACAGACAAGAGTGATGACTCCTTGCCCATGGGAGTTGTCGTAGACTATACAAACCAAGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000530863.1
ENST00000651022.1
ENST00000652454.1
CDS CCA 72 bp TCATCTCCTCAGAAGTGCCCACTTGGAAACAGGCTTTaGAAGTTCGGGCTTTTAACTCTTCCAACTCCTTCT +
Preference number: 6 (lower is better)
Translates to: SSPQKCPLGNRL*KFGLLTLPTPS
Trigger: AGAAGGAGTTGGAAGAGTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAGTGGGCACTTCTGAGGAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000530630.1
ENST00000651022.1
ENST00000652454.1
CDS CCA 72 bp GAAGCCTTATTGGTTGGTTTTGTAGAATCATCTGCTTaGCCAACCCGCAGTCCTGAAAAACTTCCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: EALLVGFVESSA*PTRSPEKLPRV
Trigger: GACTCTGGGAAGTTTTTCAGGACTGCGGGTTGGCCAAGCAGATGATTCTACAAAACCAACCAATAAGGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS CCA 72 bp GCAACAGGTACTTTCTCTGATTTTCACGCACCTTGCTaGGAAGTTTTTAATCATTCTGGCACCCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: ATGTFSDFHAPC*EVFNHSGTQAQ
Trigger: CTGAGCCTGGGTGCCAGAATGATTAAAAACTTCCCAGCAAGGTGCGTGAAAATCAGAGAAAGTACCTGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS CCA 72 bp CTTCTCAGAACACAGAAAAAGTCTCAGTTGGGTGTTTaGAAAGATGGGAGTGACAAGCCGCCTAGAAGCCAA +
Preference number: 6 (lower is better)
Translates to: LLRTQKKSQLGV*KDGSDKPPRSQ
Trigger: TTGGCTTCTAGGCGGCTTGTCACTCCCATCTTTCCAAACACCCAACTGAGACTTTTTCTGTGTTCTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS CAA 72 bp TTCATCTCCTCAGAAGTGCCCACTTGGAAACAGGCTTaGGAAGTTCGGGCTTTTAACTCTTCCAACTCCTTC +
Preference number: 6 (lower is better)
Translates to: FISSEVPTWKQA*EVRAFNSSNSF
Trigger: GAAGGAGTTGGAAGAGTTAAAAGCCCGAACTTCCAAAGCCTGTTTCCAAGTGGGCACTTCTGAGGAGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000530630.1
ENST00000651022.1
ENST00000652454.1
CDS CAA 72 bp TTCAGCCTCTTCCTCTGTTGGTTGATGATTTCCCGATaGTTGGCTAGGGTGTTAAACAGTGTCTCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: FSLFLCWLMISR*LARVLNSVSRS
Trigger: AGAGCGAGAGACACTGTTTAACACCCTAGCCAACAATCGGGAAATCATCAACCAACAGAGGAAGAGGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS CAA 72 bp GGCTGGGTACTAGTTAGGCTTGTGGATGAAGCCTTATaGGTTGGTTTTGTAGAATCATCTGCTTGGCCAACC +
Preference number: 6 (lower is better)
Translates to: GWVLVRLVDEAL*VGFVESSAWPT
Trigger: GGTTGGCCAAGCAGATGATTCTACAAAACCAACCAATAAGGCTTCATCCACAAGCCTAACTAGTACCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000465486.6
ENST00000470765.5
ENST00000483497.6
ENST00000525384.1
ENST00000528114.1
ENST00000531600.1
ENST00000652454.1
CDS CAA 72 bp TCTCCAAACGACGAGCTGGCAAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAATAGGTTAGAGGTATCT +
Preference number: 6 (lower is better)
Translates to: SPNDELANPPNV*APLFPNRLEVS
Trigger: AGATACCTCTAACCTATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS TCA 72 bp CACTCTCCAGAGACTGGGAGACAGATGACGTTGAGCTaGCTTCATCCAAGTCTTCATAATATCTCTGAGACA +
Preference number: 6 (lower is better)
Translates to: HSPETGRQMTLS*LHPSLHNISET
Trigger: TGTCTCAGAGATATTATGAAGACTTGGATGAAGTCAGCTCAACGTCATCTGTCTCCCAGTCTCTGGAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000652454.1
CDS TCA 72 bp TGCTGGCCAAAGACTATTCCACCAGTACTGGCTGCTTaGCCAAACACAGAACCAGTATTACTAGACCCAAAA +
Preference number: 6 (lower is better)
Translates to: CWPKTIPPVLAA*PNTEPVLLDPK
Trigger: TTTTGGGTCTAGTAATACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAGTCTTTGGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 72 bp GAGGTGTTTTGGCTGTGGAGTAGGGCACTGAAGAACTaGAAAACACACAAAGCATACACTCAGAGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: EVFWLWSRALKN*KTHKAYTQRKA
Trigger: TGCCTTTCTCTGAGTGTATGCTTTGTGTGTTTTTCAGTTCTTCAGTGCCCTACTCCACAGCCAAAACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524578.5
CDS TCA 72 bp CCAAATAGGTTAGAGGTATCTGAAGAGATGAAGATGTaGGGGAGGTCAGAGGGAGACAAATGTCCTTACCTG +
Preference number: 6 (lower is better)
Translates to: PNRLEVSEEMKM*GRSEGDKCPYL
Trigger: CAGGTAAGGACATTTGTCTCCCTCTGACCTCCCTCACATCTTCATCTCTTCAGATACCTCTAACCTATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530491.1
CDS GCA 72 bp GGAAGAGTTGCACATACTTTCACTGTTTCCGTGACTTaGAGGACAGCAATACTACCATCAGCCAGACAAACT +
Preference number: 6 (lower is better)
Translates to: GRVAHTFTVSVT*RTAILPSARQT
Trigger: AGTTTGTCTGGCTGATGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAGTATGTGCAACTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CCA 72 bp TGGGGGACAGTTTGGCTGGTACTTTGGGCAAGGATTTaGTGTGAGATTCTATGGTGGTTTTCAACAAAGCAT +
Preference number: 6 (lower is better)
Translates to: WGTVWLVLWARI*CEILWWFSTKH
Trigger: ATGCTTTGTTGAAAACCACCATAGAATCTCACACCAAATCCTTGCCCAAAGTACCAGCCAAACTGTCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000489260.1
ENST00000525980.5
ENST00000652454.1
CDS CAA 72 bp AGGAAGAGTTGCACATACTTTCACTGTTTCCGTGACTaGCAGGACAGCAATACTACCATCAGCCAGACAAAC +
Preference number: 6 (lower is better)
Translates to: RKSCTYFHCFRD*QDSNTTISQTN
Trigger: GTTTGTCTGGCTGATGGTAGTATTGCTGTCCTGCAAGTCACGGAAACAGTGAAAGTATGTGCAACTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000526412.1
ENST00000651022.1
ENST00000651639.1
ENST00000652454.1
CDS CAA 72 bp CCTGCACATTTACCACTTGAGGGACATTCTTCAACGTaGATTCAGTCAAAGTGTTTACAGCTGGTGCCTGAC +
Preference number: 6 (lower is better)
Translates to: PAHLPLEGHSST*IQSKCLQLVPD
Trigger: GTCAGGCACCAGCTGTAAACACTTTGACTGAATCAACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000526346.5
ENST00000652454.1
CDS CAA 72 bp TTGCTGGCCAAAGACTATTCCACCAGTACTGGCTGCTaGACCAAACACAGAACCAGTATTACTAGACCCAAA +
Preference number: 6 (lower is better)
Translates to: LLAKDYSTSTGC*TKHRTSITRPK
Trigger: TTTGGGTCTAGTAATACTGGTTCTGTGTTTGGTCAAGCAGCCAGTACTGGTGGAATAGTCTTTGGCCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS CAA 72 bp TCTCCAAACGACGAGCTGGCAAATCCACCAAATGTCTaGGCCCCACTGTTTCCAAATAGGTTAGAGGTATTT +
Preference number: 6 (lower is better)
Translates to: SPNDELANPPNV*APLFPNRLEVF
Trigger: AAATACCTCTAACCTATTTGGAAACAGTGGGGCCAAGACATTTGGTGGATTTGCCAGCTCGTCGTTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000453861.6
ENST00000483497.6
ENST00000650694.1
ENST00000652454.1
CDS TCA 72 bp GACAGTTTGGCTGGTACTTTGGGCAAGGATTTGGTGTaGGATTCTATGGTGGTTTTCAACAAAGCATTGCAC +
Preference number: 6 (lower is better)
Translates to: DSLAGTLGKDLV*DSMVVFNKALH
Trigger: GTGCAATGCTTTGTTGAAAACCACCATAGAATCTCACACCAAATCCTTGCCCAAAGTACCAGCCAAACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000489260.1
ENST00000525980.5
ENST00000652454.1
CDS TCA 72 bp CTGCACATTTACCACTTGAGGGACATTCTTCAACGTTaGTTCAGTCAAAGTGTTTACAGCTGGTGCCTGACT +
Preference number: 6 (lower is better)
Translates to: LHIYHLRDILQR*FSQSVYSWCLT
Trigger: AGTCAGGCACCAGCTGTAAACACTTTGACTGAATCAACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000451030.5
ENST00000525980.5
ENST00000526346.5
ENST00000652454.1
CDS TCA 72 bp CGTTTTAGAACTCCTTTCAGGCATCGACACCTCCTTTaGACAAGAGACTTGGTAGTCATCCCGTGTACATTT +
Preference number: 6 (lower is better)
Translates to: RFRTPFRHRHLL*TRDLVVIPCTF
Trigger: AAATGTACACGGGATGACTACCAAGTCTCTTGTTCAAAGGAGGTGTCGATGCCTGAAAGGAGTTCTAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2
CDS TCA 72 bp AGCCAAGATTCCCAATTAATCATTCCTCAATGTAACTaGGGTAGTAATGATGCTGTCTCTCCGTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SQDSQLIIPQCN*GSNDAVSPCSC
Trigger: GCAGCTGCACGGAGAGACAGCATCATTACTACCTCAGTTACATTGAGGAATGATTAATTGGGAATCTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530843.1
CDS CCA 72 bp TGCCCCTTGTGCAGCAGTGAAATTAGAAGACGGTGTTaGTGTGATTATCCCAAAATTAAAGCCAGTCCTGAA +
Preference number: 6 (lower is better)
Translates to: CPLCSSEIRRRC*CDYPKIKASPE
Trigger: TTCAGGACTGGCTTTAATTTTGGGATAATCACACCAACACCGTCTTCTAATTTCACTGCTGCACAAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470765.5
CDS CCA 72 bp CAAGCCAACCTTCTGTCCAATATACAATACCAGTTTTaGGTAGGATACAGATGCATGGGACCCCAATACAAC +
Preference number: 6 (lower is better)
Translates to: QANLLSNIQYQF*VGYRCMGPQYN
Trigger: GTTGTATTGGGGTCCCATGCATCTGTATCCTACCCAAAACTGGTATTGTATATTGGACAGAAGGTTGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524578.5
CDS CAA 72 bp CACATGAGTAATGCTACTCAACACAGAGTCTGTACCTaGTGCAGCAGTGAAATTAGAAGACGGTGTTGGTGT +
Preference number: 6 (lower is better)
Translates to: HMSNATQHRVCT*CSSEIRRRCWC
Trigger: ACACCAACACCGTCTTCTAATTTCACTGCTGCACAAGGTACAGACTCTGTGTTGAGTAGCATTACTCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524578.5
ENST00000525980.5
CDS GCA 72 bp ATGAGTAATGCTACTCAACACAGAGTCTGTACCTTGTaGAGCAGTGAAATTAGAAGACGGTGTTGGTGTGAT +
Preference number: 6 (lower is better)
Translates to: MSNATQHRVCTL*SSEIRRRCWCD
Trigger: ATCACACCAACACCGTCTTCTAATTTCACTGCTGCACAAGGTACAGACTCTGTGTTGAGTAGCATTACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524578.5
ENST00000525980.5
CDS CAA 72 bp AGGAAGAGTCTTTTCATCACTGATGGTGATTTCCACTaGGTTTGTATAGTCTACGACAACTCCCATGGGCAA +
Preference number: 6 (lower is better)
Translates to: RKSLFITDGDFH*VCIVYDNSHGQ
Trigger: TTGCCCATGGGAGTTGTCGTAGACTATACAAACCAAGTGGAAATCACCATCAGTGATGAAAAGACTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359428.10
ENST00000411637.6
ENST00000530863.1
ENST00000651022.1
ENST00000652454.1
CDS CAA 72 bp TCAAGCCAACCTTCTGTCCAATATACAATACCAGTTTaGGGTAGGATACAGATGCATGGGACCCCAATACAA +
Preference number: 6 (lower is better)
Translates to: SSQPSVQYTIPV*GRIQMHGTPIQ
Trigger: TTGTATTGGGGTCCCATGCATCTGTATCCTACCCAAAACTGGTATTGTATATTGGACAGAAGGTTGGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524578.5
CDS CAA 72 bp CCTGCACATTTACCACTTGAGGGACATTCTTCAACGTaGATTCAGTCAAAGTGTTTACAGCTAGTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PAHLPLEGHSST*IQSKCLQLVSA
Trigger: AGCAGAGACTAGCTGTAAACACTTTGACTGAATCAACGTTGAAGAATGTCCCTCAAGTGGTAAATGTGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531929.5
CDS TCA 72 bp AAGCCTCCTGATAACAACTTAGGGCAGATGGCGTTATaGAAGAATTTCTTGAAGTCCCTTCTGTCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: KPPDNNLGQMAL*KNFLKSLLSQR
Trigger: TCTTTGAGACAGAAGGGACTTCAAGAAATTCTTTCATAACGCCATCTGCCCTAAGTTGTTATCAGGAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526412.1
CDS GCA 72 bp GGTGAATCTCGGAAATTTCTTGCAAGTCACACTACTTaGCCAGACATGCATAAAGCAAAGTTCCTTAGGTTT +
Preference number: 6 (lower is better)
Translates to: GESRKFLASHTT*PDMHKAKFLRF
Trigger: AAACCTAAGGAACTTTGCTTTATGCATGTCTGGGCAAGTAGTGTGACTTGCAAGAAATTTCCGAGATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465486.6
ENST00000483497.6
ENST00000531600.1
CDS CAA 72 bp TTCTTTTCACTATTTAAAACAGATGTAGCCCGTCTGTaGTACCCTCATTCTTACAGAAGTACTGGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: FFSLFKTDVARL*YPHSYRSTGRA
Trigger: TGCTCTCCCAGTACTTCTGTAAGAATGAGGGTACAACAGACGGGCTACATCTGTTTTAAATAGTGAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531584.1
CDS CAA 90 bp ATCCAAAATGTAGGAACTTTTGACATTATGTATTCATCTATGACTTaGGGCAAGTCACCTAAGCCTCCTGATAACAACTTAGGGCAGATG +
Preference number: 6 (lower is better)
Translates to: IQNVGTFDIMYSSMT*GKSPKPPDNNLGQM
Trigger: CATCTGCCCTAAGTTGTTATCAGGAGGCTTAGGTGACTTGCCCAAAGTCATAGATGAATACATAATGTCAAAAGTTCCTACATTTTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526412.1
CDS TCA 72 bp AACAAAAGAGAGGATTTCATGATCAGCAATGAATGGTaGATCTCGGAAATTTCTTGCAAGTCACACTACTTG +
Preference number: 6 (lower is better)
Translates to: NKREDFMISNEW*ISEISCKSHYL
Trigger: CAAGTAGTGTGACTTGCAAGAAATTTCCGAGATTCACCATTCATTGCTGATCATGAAATCCTCTCTTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465486.6
ENST00000483497.6
ENST00000531600.1
CDS CCA 72 bp GGTTCTTATTCCACTATTCAGATTAACAACAGATTCTaGAGACATTTTCTCTATCCCCTATTAAGAACCAAC +
Preference number: 6 (lower is better)
Translates to: GSYSTIQINNRF*RHFLYPLLRTN
Trigger: GTTGGTTCTTAATAGGGGATAGAGAAAATGTCTCCAGAATCTGTTGTTAATCTGAATAGTGGAATAAGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489260.1
CDS CAA 72 bp ACTATAGTTTATTTTCAAGATAAAGATGCTGTCATCTaGCCAAGACTCAGATCCAAGTATCTCAACAATTCC +
Preference number: 6 (lower is better)
Translates to: TIVYFQDKDAVI*PRLRSKYLNNS
Trigger: GGAATTGTTGAGATACTTGGATCTGAGTCTTGGCAAGATGACAGCATCTTTATCTTGAAAATAAACTATAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496921.2