RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUP210L (Homo sapiens)

Ensembl gene IDs: ENSG00000143552

Ensembl transcript IDs: ENST00000271854.3, ENST00000368553.5, ENST00000368559.7

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGCCAGTCATGGCGACTaGCAGGTCTCGGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQASHGD*QVSGSR
Trigger: GCGGGAACCCGAGACCTGGCAGTCGCCATGACTGGC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCCGGACAGCCAGTCATaGCGACTGCCAGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQPDSQS*RLPGLG
Trigger: CCCGAGACCTGGCAGTCGCCATGACTGGCTGTCCGG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCGGACAGCCAGTCATaGCGACTGCCAGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPDSQS*RLPGLG
Trigger: CCCGAGACCTGGCAGTCGCCATGACTGGCTGTCCGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGGCAGAGGACATGGCTaGGCACCAGCTGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCGRGHG*APAGTL
Trigger: CAAGGTGCCAGCTGGTGCCCAGCCATGTCCTCTGCC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCTATTCCCCCTGACCTaGCCTGCAGTCACCACTCCT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKLFPLT*PAVTTP
Trigger: AGGAGTGGTGACTGCAGGTCAGGTCAGGGGGAATAG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGCCCAAGGGAAATGCTaGCAGGGTCCTTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPAQGKC*QGPSLG
Trigger: GCCCAAGGAAGGACCCTGTCAGCATTTCCCTTGGGC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGCCCAAGGGAAATGCTaGCAGGGTCCTTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCAQGKC*QGPSLG
Trigger: GCCCAAGGAAGGACCCTGTCAGCATTTCCCTTGGGC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAGGTGTCAGCCACACTaGGGGCCTGTAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCRCQPH*GPVAAP
Trigger: AGGAGCTGCTACAGGCCCTCAGTGTGGCTGACACCT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTCTGACACCCTGAGGTaGGCTGTTGCTGGACCCAAG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQSDTLR*AVAGPK
Trigger: CTTGGGTCCAGCAACAGCCCACCTCAGGGTGTCAGA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTGGAGAAGTGAACGATaGATTGGGGCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQWRSER*IGAGGH
Trigger: GTGGCCCCCAGCCCCAATCCATCGTTCACTTCTCCA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGTCTGGCCCAGTTGTaGGGCAGTCACCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPSLAQL*GSHHGC
Trigger: ACAGCCATGGTGACTGCCTCACAACTGGGCCAGACT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCAGTACTATTCCCCCTaGCCTGACCTGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKQYYSP*PDLQSP
Trigger: TGGTGACTGCAGGTCAGGTCAGGGGGAATAGTACTG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCAGCTCTTGTATGTCTaGCACCCTGAGGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQQLLYV*HPEVGC
Trigger: ACAGCCCACCTCAGGGTGTCAGACATACAAGAGCTG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCCCCTGACCTGACCTaGAGTCACCACTCCTTTCGT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPPDLT*SHHSFR
Trigger: ACGAAAGGAGTGGTGACTGCAGGTCAGGTCAGGGGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGAGCCGAGTTGCAGCTaGAAGGATCCTAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKEPSCS*KDPNSP
Trigger: AGGGCTGTTAGGATCCTTGCAGCTGCAACTCGGCTC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGAGCCGAGTTGCAGCTaGAAGGATCCTAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQEPSCS*KDPNSP
Trigger: AGGGCTGTTAGGATCCTTGCAGCTGCAACTCGGCTC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGGGCTCCAAGATCCATaGACGAGGACCCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKGLQDP*TRTPFK
Trigger: TTTGAAGGGGGTCCTCGTCCATGGATCTTGGAGCCC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGCAGAGGACATGGCTaGGCACCAGCTGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGRGHG*APAGTL
Trigger: CAAGGTGCCAGCTGGTGCCCAGCCATGTCCTCTGCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCCATTTGTTGTGCTGTaGCAGAGGACATGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQPFVVL*QRTWLG
Trigger: GCCCAGCCATGTCCTCTGCCACAGCACAACAAATGG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGACGATGGATTGGGGCTaGGGGCCACCTTCAGACATT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKTMDWG*GPPSDI
Trigger: AATGTCTGAAGGTGGCCCCCAGCCCCAATCCATCGT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGGGCTGTGTATAGCTTaGGTTGGCTGCTCACTCGCA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKGLCIA*VGCSLA
Trigger: TGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGGGGAGAGTGGCTATaGCCAGCGACCACTAGAACT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKRGEWL*PATTRT
Trigger: AGTTCTAGTGGTCGCTGGCCATAGCCACTCTCCCCT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGTATACTGGAGTTACTaGCATACTGGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQVYWSY*HTGRVG
Trigger: GCCCACCCTGCCAGTATGTCAGTAACTCCAGTATAC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGCCCAAGGGAAATGCTaGCAGGGTCCTTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLAQGKC*QGPSLG
Trigger: GCCCAAGGAAGGACCCTGTCAGCATTTCCCTTGGGC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGACCGGGTCTGCCCACTaGCATCATCTTTTGCTACCA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQTGSAH*HHLLLP
Trigger: TGGTAGCAAAAGATGATGGCAGTGGGCAGACCCGGT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCTGAGGTGGGCTGTTaGTGGACCCAAGAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCPEVGC*WTQESQ
Trigger: TTGGCTTTCTTGGGTCCAGCAACAGCCCACCTCAGG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCAGGTATGTCACCGGTaGTACCTGGACCCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQQVCHR*YLDPSY
Trigger: ATAACTGGGGTCCAGGTAGCACCGGTGACATACCTG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGCTGACTCGTTGTCCTaGGCAATGCTCCACTCAAAC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQADSLS*AMLHSN
Trigger: GTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGACATACTGGCAGGGTaGGCACAAATGAAGCGAACC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQDILAG*AQMKRT
Trigger: GGTTCGCTTCATTTGTGCCCACCCTGCCAGTATGTC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGACATACTGGCAGGGTaGGCACAAATGAAGCGAACC +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKDILAG*AQMKRT
Trigger: GGTTCGCTTCATTTGTGCCCACCCTGCCAGTATGTC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATTTGTTGTGCTGTaGCAGAGGACATGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCPFVVL*QRTWLG
Trigger: GCCCAGCCATGTCCTCTGCCACAGCACAACAAATGG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGAGGTGGGCTGTTGCTaGACCCAAGAAAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQEVGCC*TQESQT
Trigger: TGTTTGGCTTTCTTGGGTCCAGCAACAGCCCACCTC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAACGATGGATTGGGGCTaGGGGCCACCTTCAGACATT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPTMDWG*GPPSDI
Trigger: AATGTCTGAAGGTGGCCCCCAGCCCCAATCCATCGT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGTCACCGGTGCTACCTaGACCCCAGTTATGGTTGTT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKVTGAT*TPVMVV
Trigger: AACAACCATAACTGGGGTCCAGGTAGCACCGGTGAC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGTCACCGGTGCTACCTaGACCCCAGTTATGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQVTGAT*TPVMVV
Trigger: AACAACCATAACTGGGGTCCAGGTAGCACCGGTGAC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGGGCTGTGTATAGCTTaGGTTGGCTGCTCACTCGCA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCGLCIA*VGCSLA
Trigger: TGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGAGTGAGGGGAGAGTaGCTATGGCCAGCGACCACT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGVRGE*LWPATT
Trigger: AGTGGTCGCTGGCCATAGCCACTCTCCCCTCACTCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCAGTTCTTCTCTTGCTaGCTCGTTGTCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKQFFSC*LVVLGN
Trigger: ATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACAGGGTGGGCACAAATaGAGCGAACCTGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPQGGHK*SEPAKP
Trigger: AGGTTTTGCAGGTTCGCTTCATTTGTGCCCACCCTG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGTATACTGGAGTTACTaGCATACTGGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPVYWSY*HTGRVG
Trigger: GCCCACCCTGCCAGTATGTCAGTAACTCCAGTATAC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTTACTGATGGAGAAGTaGACGATGGATTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKLLMEK*TMDWGW
Trigger: CCAGCCCCAATCCATCGTTCACTTCTCCATCAGTAA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGTACATGGCACAGCATaGGGGTCGCTGGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCVHGTA*GSLEEV
Trigger: TACTTCTTCCAGCGACCCTCATGCTGTGCCATGTAC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGTACATGGCACAGCATaGGGGTCGCTGGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPVHGTA*GSLEEV
Trigger: TACTTCTTCCAGCGACCCTCATGCTGTGCCATGTAC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGAGGTTGTAGACTCATaGAGTGAGGGGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQEVVDS*SEGENL
Trigger: CAAGTTCTCCCCCTCACTTCATGAGTCTACAACCTC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGAGGTTGTAGACTCATaGAGTGAGGGGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKEVVDS*SEGENL
Trigger: CAAGTTCTCCCCCTCACTTCATGAGTCTACAACCTC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGACCACTGCCTCACTTTaGCTGGTGAGTACACAGGAA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQTTASL*LVSTQE
Trigger: TTCCTGTGTACTCACCAGTCAAAGTGAGGCAGTGGT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTCCTTCAGCATCCAATaGCCTCACCATCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQSFSIQ*PHHQFQ
Trigger: CTGGAACTGATGGTGAGGGCATTGGATGCTGAAGGA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCCCCCTGACCTGACCTaGAGTCACCACTCCTTTCGT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLPPDLT*SHHSFR
Trigger: ACGAAAGGAGTGGTGACTGCAGGTCAGGTCAGGGGG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCCATGTAACCGGGTCTaGCCACTGCCATCATCTTTT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKPCNRV*PLPSSF
Trigger: AAAAGATGATGGCAGTGGGCAGACCCGGTTACATGG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTGTGATGAGCCGAGTTaGAGCTGCAAGGATCCTAAC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQCDEPS*SCKDPN
Trigger: GTTAGGATCCTTGCAGCTGCAACTCGGCTCATCACA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACAGGTATGTCACCGGTaGTACCTGGACCCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPQVCHR*YLDPSY
Trigger: ATAACTGGGGTCCAGGTAGCACCGGTGACATACCTG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCAGGTATGTCACCGGTaGTACCTGGACCCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCQVCHR*YLDPSY
Trigger: ATAACTGGGGTCCAGGTAGCACCGGTGACATACCTG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGAATATAATCTGCCATaGCTGGATGTCTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQEYNLP*LDVSGP
Trigger: GGGACCGGAGACATCCAGGCATGGCAGATTATATTC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGAATATAATCTGCCATaGCTGGATGTCTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKEYNLP*LDVSGP
Trigger: GGGACCGGAGACATCCAGGCATGGCAGATTATATTC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGAGCAGCTCCTCTGACTaGGGTCGAACCTTGATTATG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQSSSSD*GRTLIM
Trigger: CATAATCAAGGTTCGACCGCAGTCAGAGGAGCTGCT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTCTGACACCCTGAGGTaGGCTGTTGCTGGACCCAAG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLSDTLR*AVAGPK
Trigger: CTTGGGTCCAGCAACAGCCCACCTCAGGGTGTCAGA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGGAGAAGTGAACGATaGATTGGGGCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLWRSER*IGAGGH
Trigger: GTGGCCCCCAGCCCCAATCCATCGTTCACTTCTCCA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAAGGAGAAAGGGGTCTaGGTACTGGTTACTCCCATG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKKEKGV*VLVTPM
Trigger: CATGGGAGTAACCAGTACCCAGACCCCTTTCTCCTT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGTGTATAGCTTGGGTTaGCTGCTCACTCGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQVYSLG*LLTRRY
Trigger: ATACCTGCGAGTGAGCAGCCAACCCAAGCTATACAC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGATAATCTGCCATGCCTaGATGTCTCCGGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQIICHA*MSPVPK
Trigger: CTTTGGGACCGGAGACATCCAGGCATGGCAGATTAT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTGGTGTCTGGCTCAATaGCATGCTCTACAGCAACAG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQWCLAQ*HALQQQ
Trigger: CTGTTGCTGTAGAGCATGCCATTGAGCCAGACACCA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGGTAAGCTTGGTGTCTaGCTCAATGGCATGCTCTAC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQGKLGV*LNGMLY
Trigger: GTAGAGCATGCCATTGAGCCAGACACCAAGCTTACC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGGCCAAGGCCTGGTTTaGGGTACAGAATCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQGQGLV*GTESFK
Trigger: CTTAAAGGATTCTGTACCCCAAACCAGGCCTTGGCC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTGTTGCAGCCGACTTTaGGCCAATGGAGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKCCSRL*ANGGCR
Trigger: TCTACAACCTCCATTGGCCCAAAGTCGGCTGCAACA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTGTTGCAGCCGACTTTaGGCCAATGGAGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQCCSRL*ANGGCR
Trigger: TCTACAACCTCCATTGGCCCAAAGTCGGCTGCAACA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGCCACTTTCTCAGAATaGGACCCGTTAAGTGCAACT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKATFSE*DPLSAT
Trigger: AGTTGCACTTAACGGGTCTCATTCTGAGAAAGTGGC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAGTCTGGCCCAGTTGTaGGGCAGTCACCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLSLAQL*GSHHGC
Trigger: ACAGCCATGGTGACTGCCTCACAACTGGGCCAGACT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATTACTGATGGAGAAGTaGACGATGGATTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLLMEK*TMDWGW
Trigger: CCAGCCCCAATCCATCGTTCACTTCTCCATCAGTAA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCACGGTCTGATTACTaGTGGAGAAGTGAACGATGG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPRSDY*WRSERW
Trigger: CCATCGTTCACTTCTCCATCAGTAATCAGACCGTGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTGCTGGCTGACAAGGTaGGTACTGAAGCAGATGATA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKCWLTR*VLKQMI
Trigger: TATCATCTGCTTCAGTACTCACCTTGTCAGCCAGCA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGACTCCTGGGATGTCATaGAAAATCATTGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQTPGMS*KIIAVP
Trigger: GGGGACTGCAATGATTTTTCATGACATCCCAGGAGT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCTGAGGCGTATCGGTTaGGTAGATTCAGCAATGAGT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLRRIG*VDSAMS
Trigger: ACTCATTGCTGAATCTACGCAACCGATACGCCTCAG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCGTTGTCCTGGGCAATaGTCCACTCAAACATCATCC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCRCPGQ*STQTSS
Trigger: GGATGATGTTTGAGTGGAGCATTGCCCAGGACAACG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACGTTGTCCTGGGCAATaGTCCACTCAAACATCATCC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPRCPGQ*STQTSS
Trigger: GGATGATGTTTGAGTGGAGCATTGCCCAGGACAACG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGAGAGCAGTCTGTGAATaGCATGGCTTCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQRAVCE*HGFFGL
Trigger: GAGACCAAAGAAGCCATGGCATTCACAGACTGCTCT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCATGTAACCGGGTCTaGCCACTGCCATCATCTTTT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPCNRV*PLPSSF
Trigger: AAAAGATGATGGCAGTGGGCAGACCCGGTTACATGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCCTGAGGTGGGCTGTTaGTGGACCCAAGAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLPEVGC*WTQESQ
Trigger: TTGGCTTTCTTGGGTCCAGCAACAGCCCACCTCAGG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGAGTATTCGTCCTGTTaGTCCATTGGTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCEYSSC*SIGVRV
Trigger: CACCCTGACACCAATGGAGCAACAGGACGAATACTC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGCCACAAGTGTGGTTTaGCCAATAGTGGTAGCTCGA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPATSVV*PIVVAR
Trigger: TCGAGCTACCACTATTGGGCAAACCACACTTGTGGC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGAGCCGAGTTGCAGCTaGAAGGATCCTAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLEPSCS*KDPNSP
Trigger: AGGGCTGTTAGGATCCTTGCAGCTGCAACTCGGCTC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTGTGATGAGCCGAGTTaGAGCTGCAAGGATCCTAAC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCCDEPS*SCKDPN
Trigger: GTTAGGATCCTTGCAGCTGCAACTCGGCTCATCACA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGACTGGTCCTGCCTGCTaGTTTTGTATGGACAACCAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKTGPAC*FCMDNH
Trigger: ATGGTTGTCCATACAAAAGCAGCAGGCAGGACCAGT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGATACTGGTCCTGCCTaGTGCTTTTGTATGGACAAC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQDTGPA*CFCMDN
Trigger: GTTGTCCATACAAAAGCAGCAGGCAGGACCAGTATC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGATAGGCATCAGAATCTaGTCTGGTTGGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQIGIRI*SGWHSG
Trigger: TCCAGAGTGCCAACCAGAGCAGATTCTGATGCCTAT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAATAGCTTGGGTTGGCTaGTCACTCGCAGGTATGTCA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPIAWVG*SLAGMS
Trigger: TGACATACCTGCGAGTGAGCAGCCAACCCAAGCTAT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGTCATGAAAAATCATTaGAGTCCCCGGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCVMKNH*SPRTPG
Trigger: GCCAGGAGTCCGGGGACTGCAATGATTTTTCATGAC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGTCATGAAAAATCATTaGAGTCCCCGGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPVMKNH*SPRTPG
Trigger: GCCAGGAGTCCGGGGACTGCAATGATTTTTCATGAC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCTGCATCATGATGGGTaGAATGCCAAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCLHHDG*NAKCSS
Trigger: GCTGCTACACTTGGCATTCCACCCATCATGATGCAG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGTGAGGCAGTCACCATaGCTGTTTTGTCATCCAGTA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQVRQSP*LFCHPV
Trigger: TACTGGATGACAAAACAGCCATGGTGACTGCCTCAC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGGCTCCAAGATCCATaGACGAGGACCCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGLQDP*TRTPFK
Trigger: TTTGAAGGGGGTCCTCGTCCATGGATCTTGGAGCCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGGCTGGGCACCAGCTaGCACCTTGTATACTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLWLGTS*HLVYWS
Trigger: ACTCCAGTATACAAGGTGCCAGCTGGTGCCCAGCCA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGGTGGTTATAGATGGTaGCATTCTCAGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKGGYRW*HSQALQ
Trigger: CTGTAGTGCCTGAGAATGCCACCATCTATAACCACC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCAGGGTGGTTATAGATaGTGGCATTCTCAGGCACTA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQQGGYR*WHSQAL
Trigger: TAGTGCCTGAGAATGCCACCATCTATAACCACCCTG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAAGGAGAAAGGGGTCTaGGTACTGGTTACTCCCATG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCKEKGV*VLVTPM
Trigger: CATGGGAGTAACCAGTACCCAGACCCCTTTCTCCTT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGTGTATAGCTTGGGTTaGCTGCTCACTCGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCVYSLG*LLTRRY
Trigger: ATACCTGCGAGTGAGCAGCCAACCCAAGCTATACAC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGGCTGTGTATAGCTTaGGTTGGCTGCTCACTCGCA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGLCIA*VGCSLA
Trigger: TGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTATAATCTGCCATGCCTaGATGTCTCCGGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCIICHA*MSPVPK
Trigger: CTTTGGGACCGGAGACATCCAGGCATGGCAGATTAT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTGGTGTCTGGCTCAATaGCATGCTCTACAGCAACAG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCWCLAQ*HALQQQ
Trigger: CTGTTGCTGTAGAGCATGCCATTGAGCCAGACACCA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGTAATGGCCAAGGCCTaGTTTGGGGTACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCVMAKA*FGVQNP
Trigger: AGGATTCTGTACCCCAAACCAGGCCTTGGCCATTAC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTTACTGAACTGTACATaGCACAGCATGAGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKLLNCT*HSMRVA
Trigger: AGCGACCCTCATGCTGTGCCATGTACAGTTCAGTAA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTTACTGAACTGTACATaGCACAGCATGAGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLLNCT*HSMRVA
Trigger: AGCGACCCTCATGCTGTGCCATGTACAGTTCAGTAA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTACAGTAACTGCATCATaGTGGGTGGAATGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCTVTAS*WVECQV
Trigger: CACTTGGCATTCCACCCATCATGATGCAGTTACTGT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAATGAGAGCAGTCTGTaGATGCCATGGCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPNESSL*MPWLLW
Trigger: CCAAAGAAGCCATGGCATTCACAGACTGCTCTCATT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCAGGGTGGGCACAAATaGAGCGAACCTGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLQGGHK*SEPAKP
Trigger: AGGTTTTGCAGGTTCGCTTCATTTGTGCCCACCCTG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCAGCTCTTGTATGTCTaGCACCCTGAGGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLQLLYV*HPEVGC
Trigger: ACAGCCCACCTCAGGGTGTCAGACATACAAGAGCTG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGAACTGTTCATGCAGTaGACAGTGACCTTGATACTG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKELFMQ*TVTLIL
Trigger: CAGTATCAAGGTCACTGTTCACTGCATGAACAGTTC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCTCCTCAATGACGGATaGATTAGGGAAACACTTGAG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKLLNDG*IRETLE
Trigger: CTCAAGTGTTTCCCTAATTCATCCGTCATTGAGGAG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATGCTGGCTGACAAGGTaGGTACTGAAGCAGATGATA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPCWLTR*VLKQMI
Trigger: TATCATCTGCTTCAGTACTCACCTTGTCAGCCAGCA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAACTGCGGTCGAACCTTaGTTATGCAGACATAAACCC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPTAVEP*LCRHKP
Trigger: GGGTTTATGTCTGCATAATCAAGGTTCGACCGCAGT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACTGAGGCGTATCGGTTaGGTAGATTCAGCAATGAGT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLRRIG*VDSAMS
Trigger: ACTCATTGCTGAATCTACGCAACCGATACGCCTCAG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGAGCAGTCTGTGAATaGCATGGCTTCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPRAVCE*HGFFGL
Trigger: GAGACCAAAGAAGCCATGGCATTCACAGACTGCTCT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCAAATGAAGCGAACCTaGAAAACCTCTACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQQMKRT*KTSTAG
Trigger: TCCAGCTGTAGAGGTTTTGCAGGTTCGCTTCATTTG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTACCGGGTCTGCCCACTaGCATCATCTTTTGCTACCA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLTGSAH*HHLLLP
Trigger: TGGTAGCAAAAGATGATGGCAGTGGGCAGACCCGGT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGATGGTGACAACACCCTaGTCACTGCTGTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKMVTTP*SLLLTK
Trigger: TTTAGTCAACAGCAGTGAGCAGGGTGTTGTCACCAT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGATGGTGACAACACCCTaGTCACTGCTGTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQMVTTP*SLLLTK
Trigger: TTTAGTCAACAGCAGTGAGCAGGGTGTTGTCACCAT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGACCATGGCAAAGTTATaGTCTACTGGGAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKTMAKL*STGSCR
Trigger: TCTACAGCTCCCAGTAGAGCATAACTTTGCCATGGT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAACTGGTCCTGCCTGCTaGTTTTGTATGGACAACCAT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPTGPAC*FCMDNH
Trigger: ATGGTTGTCCATACAAAAGCAGCAGGCAGGACCAGT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGAAATTCCCCTCAAACTaGCCAGAGGAACTGTTCATG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQKFPSN*PEELFM
Trigger: CATGAACAGTTCCTCTGGGCAGTTTGAGGGGAATTT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAATAGGCATCAGAATCTaGTCTGGTTGGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPIGIRI*SGWHSG
Trigger: TCCAGAGTGCCAACCAGAGCAGATTCTGATGCCTAT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTATAGGCATCAGAATCTaGTCTGGTTGGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCIGIRI*SGWHSG
Trigger: TCCAGAGTGCCAACCAGAGCAGATTCTGATGCCTAT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTTCCCTGGTCCAATATaGAGCAAGTCATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKFPGPI*SKSSLF
Trigger: GAACAGAGATGACTTGCTGCATATTGGACCAGGGAA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAACAGGAATATAATCTaGCATGCCTGGATGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKNRNII*HAWMSP
Trigger: CGGAGACATCCAGGCATGGCAGATTATATTCCTGTT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGAACAGGAATATAATCTaGCATGCCTGGATGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQNRNII*HAWMSP
Trigger: CGGAGACATCCAGGCATGGCAGATTATATTCCTGTT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTCTGGCTCAATGGCATaGTCTACAGCAACAGGAATA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKSGSMA*STATGI
Trigger: TATTCCTGTTGCTGTAGAGCATGCCATTGAGCCAGA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACTCCATAACCAATGTTaGAGCCGACTTTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLHNQC*SRLWAN
Trigger: ATTGGCCCAAAGTCGGCTGCAACATTGGTTATGGAG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCTCCATAACCAATGTTaGAGCCGACTTTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCLHNQC*SRLWAN
Trigger: ATTGGCCCAAAGTCGGCTGCAACATTGGTTATGGAG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTCACAGCGTAGCTCATaGTCAGTCACTATTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKSQRSS*SVTISR
Trigger: TCGAGAAATAGTGACTGACCATGAGCTACGCTGTGA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGCTGACTCGTTGTCCTaGGCAATGCTCCACTCAAAC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLADSLS*AMLHSN
Trigger: GTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGTGAGGCAGTCACCATaGCTGTTTTGTCATCCAGTA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCVRQSP*LFCHPV
Trigger: TACTGGATGACAAAACAGCCATGGTGACTGCCTCAC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCTGCGATATGTGTACTaGAACAATGCATTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKLRYVY*NNALVQ
Trigger: CTGGACCAATGCATTGTTCCAGTACACATATCGCAG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGACTGTTACCAGAGTATaGCCAAGAGATTTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKTVTRV*PRDLAA
Trigger: CGCAGCTAAATCTCTTGGCCATACTCTGGTAACAGT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGGGTTCAGGACACCTaGATGATTTCCAATTCGGAA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKRVQDT*MISNSE
Trigger: TTCCGAATTGGAAATCATCCAGGTGTCCTGAACCCT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTGGCTGGGCACCAGCTaGCACCTTGTATACTGGAGT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLWLGTS*HLVYWS
Trigger: ACTCCAGTATACAAGGTGCCAGCTGGTGCCCAGCCA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTTTGGAATGGGCGTTTaGAAGAGCCAAGAACCCTCA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCFGMGV*KSQEPS
Trigger: TGAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTACGATGGATTGGGGCTaGGGGCCACCTTCAGACATT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLTMDWG*GPPSDI
Trigger: AATGTCTGAAGGTGGCCCCCAGCCCCAATCCATCGT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACATTTACTGTCTGGATaGTGCCATGAACCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPHLLSG*CHEPQL
Trigger: CAGCTGTGGTTCATGGCACCATCCAGACAGTAAATG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCATTTACTGTCTGGATaGTGCCATGAACCACAGCTG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCHLLSG*CHEPQL
Trigger: CAGCTGTGGTTCATGGCACCATCCAGACAGTAAATG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCATCAGAATCTGCTCTaGTTGGCACTCTGGATAGAA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKHQNLL*LALWIE
Trigger: TTCTATCCAGAGTGCCAACCAGAGCAGATTCTGATG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATTACTGAACTGTACATaGCACAGCATGAGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLLNCT*HSMRVA
Trigger: AGCGACCCTCATGCTGTGCCATGTACAGTTCAGTAA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTGTATGCTAGGAAGATaGAAGCTGTTGATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKCMLGR*KLLMPA
Trigger: TGCTGGCATCAACAGCTTCCATCTTCCTAGCATACA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGGTGATGCCATTTGCTaGAAGGAAGTGAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCGDAIC*KEVKLT
Trigger: GGTCAACTTCACTTCCTTCCAGCAAATGGCATCACC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTTCCAGGTTGGACAGTaGAACCTAAAAATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCFQVGQ*NLKIQA
Trigger: AGCCTGGATTTTTAGGTTTCACTGTCCAACCTGGAA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCTTTATTCTGGTAAATaGTGGAGGTCAGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKLYSGK*WRSGMH
Trigger: ATGCATCCCTGACCTCCATCATTTACCAGAATAAAG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCTTTATTCTGGTAAATaGTGGAGGTCAGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLYSGK*WRSGMH
Trigger: ATGCATCCCTGACCTCCATCATTTACCAGAATAAAG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAGATCCAAGGATAAATaGGAGCAGTCTGTGAATGCC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCRSKDK*EQSVNA
Trigger: GGCATTCACAGACTGCTCTCATTTATCCTTGGATCT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTTCAGGACACCTGGATaGTTTCCAATTCGGAATGTG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCFRTPG*FPIRNV
Trigger: CACATTCCGAATTGGAAATCATCCAGGTGTCCTGAA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAATAGCCCACAAAATTaGCTCCAATCAGTACAGTCC +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKNSPQN*LQSVQS
Trigger: GGACTGTACTGATTGGAGTCAATTTTGTGGGCTATT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAATGTGCCGAGGAGTTaGTGTGTATTTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKNVPRS*CVFSSH
Trigger: ATGGGAAGAAAATACACATCAACTCCTCGGCACATT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTCTCTGGAAGAAGTCTaGATGGAGGAAACACTTCAA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKSLEEV*MEETLQ
Trigger: TTGAAGTGTTTCCTCCATTCAGACTTCTTCCAGAGA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCCACGGTCTGATTACTaGTGGAGAAGTGAACGATGG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLPRSDY*WRSERW
Trigger: CCATCGTTCACTTCTCCATCAGTAATCAGACCGTGG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCTAACAGCCCTTAGCTaGACAACTTCAATCTGTACT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLTALS*TTSICT
Trigger: AGTACAGATTGAAGTTGTTCAGCTAAGGGCTGTTAG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTACTGGTTACTCCCATaGCATAAACTGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCYWLLP*HKLASW
Trigger: CCAAGATGCCAGTTTATGTCATGGGAGTAACCAGTA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATACTGGTTACTCCCATaGCATAAACTGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPYWLLP*HKLASW
Trigger: CCAAGATGCCAGTTTATGTCATGGGAGTAACCAGTA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGAACTGTTCATGCAGTaGACAGTGACCTTGATACTG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPELFMQ*TVTLIL
Trigger: CAGTATCAAGGTCACTGTTCACTGCATGAACAGTTC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCTCCTCAATGACGGATaGATTAGGGAAACACTTGAG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCLLNDG*IRETLE
Trigger: CTCAAGTGTTTCCCTAATTCATCCGTCATTGAGGAG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAATCTTGATGATGCATTaGCCACCACCTCTCGATATG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPILMMH*PPPLDM
Trigger: CATATCGAGAGGTGGTGGTCAATGCATCATCAAGAT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTATCTTGATGATGCATTaGCCACCACCTCTCGATATG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCILMMH*PPPLDM
Trigger: CATATCGAGAGGTGGTGGTCAATGCATCATCAAGAT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGAGCTTGAATACAGTTaGATTGAGGGTATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQELEYS*IEGIGE
Trigger: CTCACCAATACCCTCAATTCAACTGTATTCAAGCTC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGTACATGGCACAGCATaGGGGTCGCTGGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLVHGTA*GSLEEV
Trigger: TACTTCTTCCAGCGACCCTCATGCTGTGCCATGTAC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCTAGCAAAGTATTACTaGACTGTACATGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLAKYY*TVHGTA
Trigger: TGCTGTGCCATGTACAGTTCAGTAATACTTTGCTAG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGCGGAATCTTCACAGTaGTCTTTCTCCATACTGAAA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKAESSQ*SFSILK
Trigger: TTTCAGTATGGAGAAAGATCACTGTGAAGATTCCGC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368553.5
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGAGGTTGTAGACTCATaGAGTGAGGGGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLEVVDS*SEGENL
Trigger: CAAGTTCTCCCCCTCACTTCATGAGTCTACAACCTC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGATTGATGAAAACAGGTaGTGCCATTTGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQIDENR*CHLLEG
Trigger: TCCTTCCAGCAAATGGCATCACCTGTTTTCATCAAT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAGGCTCAACAGTAACTaGATCATGATGGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCRLNSN*IMMGGM
Trigger: CATTCCACCCATCATGATGCAGTTACTGTTGAGCCT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGATGAGACCCGTTAAGTaGAACTCTATGGTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQMRPVK*NSMVLQ
Trigger: TTGCAAGACCATAGAGTTGCACTTAACGGGTCTCAT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGTGATGAGCCGAGTTaGAGCTGCAAGGATCCTAAC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLCDEPS*SCKDPN
Trigger: GTTAGGATCCTTGCAGCTGCAACTCGGCTCATCACA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAAAACCTCTGAATaGCTGGGCACTAGATCCAAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKRKTSE*LGTRSN
Trigger: ATTGGATCTAGTGCCCAGGCATTCAGAGGTTTTTCT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTACCATGGCAAAGTTATaGTCTACTGGGAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCTMAKL*STGSCR
Trigger: TCTACAGCTCCCAGTAGAGCATAACTTTGCCATGGT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTATAGCTTGGGTTGGCTaGTCACTCGCAGGTATGTCA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLIAWVG*SLAGMS
Trigger: TGACATACCTGCGAGTGAGCAGCCAACCCAAGCTAT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTTCCCTGGTCCAATATaGAGCAAGTCATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCFPGPI*SKSSLF
Trigger: GAACAGAGATGACTTGCTGCATATTGGACCAGGGAA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGAATATAATCTGCCATaGCTGGATGTCTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLEYNLP*LDVSGP
Trigger: GGGACCGGAGACATCCAGGCATGGCAGATTATATTC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAACAGGAATATAATCTaGCATGCCTGGATGTCTCCG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCNRNII*HAWMSP
Trigger: CGGAGACATCCAGGCATGGCAGATTATATTCCTGTT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATCTGGCTCAATGGCATaGTCTACAGCAACAGGAATA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPSGSMA*STATGI
Trigger: TATTCCTGTTGCTGTAGAGCATGCCATTGAGCCAGA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTACAGGTGATGCCATTTaGTGGAAGGAAGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCTGDAI*WKEVKL
Trigger: CAACTTCACTTCCTTCCAGCAAATGGCATCACCTGT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAGCCCTCACTACCACTaGCTCACTTTGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLSPHYH*LTLTGE
Trigger: CTCACCAGTCAAAGTGAGGCAGTGGTAGTGAGGGCT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCTGCATCATGATGGGTaGAATGCCAAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLHHDG*NAKCSS
Trigger: GCTGCTACACTTGGCATTCCACCCATCATGATGCAG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCACCATCAGTTCCAGTaGCGAATCATCTACATAAAG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQHHQFQ*RIIYIK
Trigger: CTTTATGTAGATGATTCGCCACTGGAACTGATGGTG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGATATATGGTGCAATTTaGGAGTCCAGACACAGATCG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQIYGAI*ESRHRS
Trigger: CGATCTGTGTCTGGACTCCCAAATTGCACCATATAT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGACTGGAACAATGCATTaGTCCAGGTCTTTGAATACC +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQTGTMH*SRSLNT
Trigger: GGTATTCAAAGACCTGGACCAATGCATTGTTCCAGT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCTGCGATATGTGTACTaGAACAATGCATTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCLRYVY*NNALVQ
Trigger: CTGGACCAATGCATTGTTCCAGTACACATATCGCAG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAACTGTTACCAGAGTATaGCCAAGAGATTTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPTVTRV*PRDLAA
Trigger: CGCAGCTAAATCTCTTGGCCATACTCTGGTAACAGT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAGGGTTCAGGACACCTaGATGATTTCCAATTCGGAA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCRVQDT*MISNSE
Trigger: TTCCGAATTGGAAATCATCCAGGTGTCCTGAACCCT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCAAAACCTCTACAGCTaGACTAGGGTTCAGGACACC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLQNLYS*TRVQDT
Trigger: GGTGTCCTGAACCCTAGTCCAGCTGTAGAGGTTTTG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGAGGTGGGCTGTTGCTaGACCCAAGAAAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLEVGCC*TQESQT
Trigger: TGTTTGGCTTTCTTGGGTCCAGCAACAGCCCACCTC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTTGCTCATAGACCAGTaGAATGTGAGCCCAGGATTA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCLLIDQ*NVSPGL
Trigger: TAATCCTGGGCTCACATTCCACTGGTCTATGAGCAA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCCTGCTGCTTTTGTATaGACAACCATGGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKPAAFV*TTMAKL
Trigger: TAACTTTGCCATGGTTGTCCATACAAAAGCAGCAGG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCCTGCTGCTTTTGTATaGACAACCATGGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQPAAFV*TTMAKL
Trigger: TAACTTTGCCATGGTTGTCCATACAAAAGCAGCAGG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACTCTGGTTGGCACTCTaGATAGAAGAGTTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLWLAL*IEELEF
Trigger: AAACTCCAACTCTTCTATCCAGAGTGCCAACCAGAG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCATCAGAATCTGCTCTaGTTGGCACTCTGGATAGAA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCHQNLL*LALWIE
Trigger: TTCTATCCAGAGTGCCAACCAGAGCAGATTCTGATG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACATCAGAATCTGCTCTaGTTGGCACTCTGGATAGAA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPHQNLL*LALWIE
Trigger: TTCTATCCAGAGTGCCAACCAGAGCAGATTCTGATG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGTGTATAGCTTGGGTTaGCTGCTCACTCGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLVYSLG*LLTRRY
Trigger: ATACCTGCGAGTGAGCAGCCAACCCAAGCTATACAC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTATAATCTGCCATGCCTaGATGTCTCCGGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLIICHA*MSPVPK
Trigger: CTTTGGGACCGGAGACATCCAGGCATGGCAGATTAT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGCCAAGGCCTGGTTTaGGGTACAGAATCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGQGLV*GTESFK
Trigger: CTTAAAGGATTCTGTACCCCAAACCAGGCCTTGGCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGTAATGGCCAAGGCCTaGTTTGGGGTACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLVMAKA*FGVQNP
Trigger: AGGATTCTGTACCCCAAACCAGGCCTTGGCCATTAC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCAGCATGAGGGTCGCTaGAAGAAGTACTTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKQHEGR*KKYFCN
Trigger: ATTACAAAAGTACTTCTTCCAGCGACCCTCATGCTG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGTTGCAGCCGACTTTaGGCCAATGGAGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLCCSRL*ANGGCR
Trigger: TCTACAACCTCCATTGGCCCAAAGTCGGCTGCAACA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTACAGTAACTGCATCATaGTGGGTGGAATGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLTVTAS*WVECQV
Trigger: CACTTGGCATTCCACCCATCATGATGCAGTTACTGT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCAGTTCTTCTCTTGCTaGCTCGTTGTCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLQFFSC*LVVLGN
Trigger: ATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGATTGGTCCAGGTCTTTaGATACCTTCTTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQIGPGL*IPSLRR
Trigger: TCTTCTCAAAGAAGGTATTCAAAGACCTGGACCAAT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAATAGCCCACAAAATTaGCTCCAATCAGTACAGTCC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPNSPQN*LQSVQS
Trigger: GGACTGTACTGATTGGAGTCAATTTTGTGGGCTATT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATGGGCTTTTCTTCTCTaGATAGCCCACAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPWAFLL*IAHKID
Trigger: GTCAATTTTGTGGGCTATTCAGAGAAGAAAAGCCCA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTCTCTGGAAGAAGTCTaGATGGAGGAAACACTTCAA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCSLEEV*MEETLQ
Trigger: TTGAAGTGTTTCCTCCATTCAGACTTCTTCCAGAGA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCCACGGTCTGATTACTaGTGGAGAAGTGAACGATGG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLPRSDY*WRSERW
Trigger: CCATCGTTCACTTCTCCATCAGTAATCAGACCGTGG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCCTGAGAAAACACAATaGCTTTGCCAGTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQPEKTQ*LCQYLH
Trigger: ATGAAGATACTGGCAAAGTCATTGTGTTTTCTCAGG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGCTGGCTGACAAGGTaGGTACTGAAGCAGATGATA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLCWLTR*VLKQMI
Trigger: TATCATCTGCTTCAGTACTCACCTTGTCAGCCAGCA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTACTCCTGGGATGTCATaGAAAATCATTGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLTPGMS*KIIAVP
Trigger: GGGGACTGCAATGATTTTTCATGACATCCCAGGAGT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGAGCTTGAATACAGTTaGATTGAGGGTATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCELEYS*IEGIGE
Trigger: CTCACCAATACCCTCAATTCAACTGTATTCAAGCTC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACTAGCAAAGTATTACTaGACTGTACATGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLAKYY*TVHGTA
Trigger: TGCTGTGCCATGTACAGTTCAGTAATACTTTGCTAG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGAAATCTGAATGGACCTaGAAGACTTTACTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQKSEWT*KTLLAG
Trigger: TCCAGCAAGTAAAGTCTTTCAGGTCCATTCAGATTT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTCCTTCAGCATCCAATaGCCTCACCATCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLSFSIQ*PHHQFQ
Trigger: CTGGAACTGATGGTGAGGGCATTGGATGCTGAAGGA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTGGGGGAGCATATTCTaGTTCGGAGTATTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQWGSIF*FGVFKN
Trigger: ATTCTTAAATACTCCGAAGCAGAATATGCTCCCCCA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTGGGGGAGCATATTCTaGTTCGGAGTATTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKWGSIF*FGVFKN
Trigger: ATTCTTAAATACTCCGAAGCAGAATATGCTCCCCCA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAATGGCAGAAGCCAACTaGAGTTTGAGTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPMAEAN*SLSSMF
Trigger: AAACATGGAACTCAAACTGCAGTTGGCTTCTGCCAT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGAGTATTCGTCCTGTTaGTCCATTGGTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLEYSSC*SIGVRV
Trigger: CACCCTGACACCAATGGAGCAACAGGACGAATACTC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGCCACAAGTGTGGTTTaGCCAATAGTGGTAGCTCGA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLATSVV*PIVVAR
Trigger: TCGAGCTACCACTATTGGGCAAACCACACTTGTGGC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGGAAACACTTCAATGTaGCGAGGAGTTGATGTGTAT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPGNTSM*RGVDVY
Trigger: ATACACATCAACTCCTCGGCACATTGAAGTGTTTCC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGGAAACACTTCAATGTaGCGAGGAGTTGATGTGTAT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCGNTSM*RGVDVY
Trigger: ATACACATCAACTCCTCGGCACATTGAAGTGTTTCC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTACTGGTCCTGCCTGCTaGTTTTGTATGGACAACCAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLTGPAC*FCMDNH
Trigger: ATGGTTGTCCATACAAAAGCAGCAGGCAGGACCAGT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGATACTGGTCCTGCCTaGTGCTTTTGTATGGACAAC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLDTGPA*CFCMDN
Trigger: GTTGTCCATACAAAAGCAGCAGGCAGGACCAGTATC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTATAGCTTGGGTTGGCTaGTCACTCGCAGGTATGTCA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLIAWVG*SLAGMS
Trigger: TGACATACCTGCGAGTGAGCAGCCAACCCAAGCTAT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCTCCATAACCAATGTTaGAGCCGACTTTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLHNQC*SRLWAN
Trigger: ATTGGCCCAAAGTCGGCTGCAACATTGGTTATGGAG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAATATATGGTGCAATTTaGGAGTCCAGACACAGATCG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPIYGAI*ESRHRS
Trigger: CGATCTGTGTCTGGACTCCCAAATTGCACCATATAT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGCTCTACAACATATATaGTGCAATTTGGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCALQHI*CNLGVQ
Trigger: CTGGACTCCCAAATTGCACCATATATGTTGTAGAGC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCATCGGTTTCCAGGTTaGACAGTGAAACCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKHRFPG*TVKPKN
Trigger: ATTTTTAGGTTTCACTGTCCAACCTGGAAACCGATG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTACTGGAACAATGCATTaGTCCAGGTCTTTGAATACC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCTGTMH*SRSLNT
Trigger: GGTATTCAAAGACCTGGACCAATGCATTGTTCCAGT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCAAAACCTCTACAGCTaGACTAGGGTTCAGGACACC +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLQNLYS*TRVQDT
Trigger: GGTGTCCTGAACCCTAGTCCAGCTGTAGAGGTTTTG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCAGATCTGGGCAAGTTaGAAATTTCTTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKQIWAS*KFLLGF
Trigger: AAAGCCCAAAAGAAATTTCCAACTTGCCCAGATCTG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGTGGTTATAGATGGTaGCATTCTCAGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGGYRW*HSQALQ
Trigger: CTGTAGTGCCTGAGAATGCCACCATCTATAACCACC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCAGGGTGGTTATAGATaGTGGCATTCTCAGGCACTA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLQGGYR*WHSQAL
Trigger: TAGTGCCTGAGAATGCCACCATCTATAACCACCCTG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATCCCATGACATAAACTaGCATCTTGGTAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPSHDIN*HLGSCD
Trigger: ATCACAGCTACCAAGATGCCAGTTTATGTCATGGGA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTCCCATGACATAAACTaGCATCTTGGTAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCSHDIN*HLGSCD
Trigger: ATCACAGCTACCAAGATGCCAGTTTATGTCATGGGA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAAGGAGAAAGGGGTCTaGGTACTGGTTACTCCCATG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLKEKGV*VLVTPM
Trigger: CATGGGAGTAACCAGTACCCAGACCCCTTTCTCCTT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAAACCTCTGAATGCCTaGGCACTAGATCCAATACAT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCKPLNA*ALDPIH
Trigger: ATGTATTGGATCTAGTGCCCAGGCATTCAGAGGTTT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCCAGTTATGGTTGTTTaGTTGACTCCAAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQPVMVV*LTPKGS
Trigger: AGAACCTTTTGGAGTCAACCAAACAACCATAACTGG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTGGTGTCTGGCTCAATaGCATGCTCTACAGCAACAG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLWCLAQ*HALQQQ
Trigger: CTGTTGCTGTAGAGCATGCCATTGAGCCAGACACCA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGGTAAGCTTGGTGTCTaGCTCAATGGCATGCTCTAC +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLGKLGV*LNGMLY
Trigger: GTAGAGCATGCCATTGAGCCAGACACCAAGCTTACC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGCCACTTTCTCAGAATaGGACCCGTTAAGTGCAACT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLATFSE*DPLSAT
Trigger: AGTTGCACTTAACGGGTCTCATTCTGAGAAAGTGGC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTTCCAGGTTGGACAGTaGAACCTAAAAATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLFQVGQ*NLKIQA
Trigger: AGCCTGGATTTTTAGGTTTCACTGTCCAACCTGGAA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTAGATCCAAGGATAAATaGGAGCAGTCTGTGAATGCC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLRSKDK*EQSVNA
Trigger: GGCATTCACAGACTGCTCTCATTTATCCTTGGATCT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAATTGGTCCAGGTCTTTaGATACCTTCTTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPIGPGL*IPSLRR
Trigger: TCTTCTCAAAGAAGGTATTCAAAGACCTGGACCAAT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTTCAGGACACCTGGATaGTTTCCAATTCGGAATGTG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLFRTPG*FPIRNV
Trigger: CACATTCCGAATTGGAAATCATCCAGGTGTCCTGAA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAACTTTCTCCTATGTTaGTCAAACACTGCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCNFLLC*SNTASS
Trigger: GGAACTAGCAGTGTTTGATCAACATAGGAGAAAGTT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCTGAGAAAACACAATaGCTTTGCCAGTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPEKTQ*LCQYLH
Trigger: ATGAAGATACTGGCAAAGTCATTGTGTTTTCTCAGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGATCTGTACTTCATCCTaGGAAAACACAATGACTTTG +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKICTSS*ENTMTL
Trigger: CAAAGTCATTGTGTTTTCTCAGGATGAAGTACAGAT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGATCTGTACTTCATCCTaGGAAAACACAATGACTTTG +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQICTSS*ENTMTL
Trigger: CAAAGTCATTGTGTTTTCTCAGGATGAAGTACAGAT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGTATGGAGTTTGAGCTaGGAATTTATAGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCVWSLS*EFIGIR
Trigger: TCTGATGCCTATAAATTCTCAGCTCAAACTCCATAC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGTATGGAGTTTGAGCTaGGAATTTATAGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPVWSLS*EFIGIR
Trigger: TCTGATGCCTATAAATTCTCAGCTCAAACTCCATAC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCTCCTCAATGACGGATaGATTAGGGAAACACTTGAG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLLNDG*IRETLE
Trigger: CTCAAGTGTTTCCCTAATTCATCCGTCATTGAGGAG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTACTCCTGGGATGTCATaGAAAATCATTGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLTPGMS*KIIAVP
Trigger: GGGGACTGCAATGATTTTTCATGACATCCCAGGAGT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAAATCTGAATGGACCTaGAAGACTTTACTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPKSEWT*KTLLAG
Trigger: TCCAGCAAGTAAAGTCTTTCAGGTCCATTCAGATTT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGATCTTTCTCCATACTaGAATCTGAATGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCDLSPY*NLNGPE
Trigger: TTCAGGTCCATTCAGATTTCAGTATGGAGAAAGATC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368553.5
CDS-3UTR TCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGATCTTTCTCCATACTaGAATCTGAATGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPDLSPY*NLNGPE
Trigger: TTCAGGTCCATTCAGATTTCAGTATGGAGAAAGATC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368553.5
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCCCCTTTCTCCATACTaGAATCTGAATGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLPLSPY*NLNGPE
Trigger: TTCAGGTCCATTCAGATTTCAGTATGGAGAAAGGGG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGGCAGCCACACTTGTaGTATTCCAATCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLWQPHL*YSNLLC
Trigger: ACAGAGAAGATTGGAATAGCACAAGTGTGGCTGCCA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCAAATGAAGCGAACCTaGAAAACCTCTACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLQMKRT*KTSTAG
Trigger: TCCAGCTGTAGAGGTTTTGCAGGTTCGCTTCATTTG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCCTTCAGACATTACCTaGATCATATTCATTGGAATC +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKPSDIT*IIFIGI
Trigger: GATTCCAATGAATATGATGCAGGTAATGTCTGAAGG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTACCATGGCAAAGTTATaGTCTACTGGGAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLTMAKL*STGSCR
Trigger: TCTACAGCTCCCAGTAGAGCATAACTTTGCCATGGT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTAAATTCCCCTCAAACTaGCCAGAGGAACTGTTCATG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLKFPSN*PEELFM
Trigger: CATGAACAGTTCCTCTGGGCAGTTTGAGGGGAATTT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTTCCCTGGTCCAATATaGAGCAAGTCATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLFPGPI*SKSSLF
Trigger: GAACAGAGATGACTTGCTGCATATTGGACCAGGGAA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTCTGGCTCAATGGCATaGTCTACAGCAACAGGAATA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLSGSMA*STATGI
Trigger: TATTCCTGTTGCTGTAGAGCATGCCATTGAGCCAGA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTATGAGTACAGCTTTTTaGGAACACAAGGTGCCATTT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCMSTAF*EHKVPF
Trigger: AAATGGCACCTTGTGTTCCCAAAAAGCTGTACTCAT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACTCAGCTATATATATTaGGGGAGCATATTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLSYIY*GSIFCF
Trigger: GAAGCAGAATATGCTCCCCCAATATATATAGCTGAG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTTTGGAATGGGCGTTTaGAAGAGCCAAGAACCCTCA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLFGMGV*KSQEPS
Trigger: TGAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGTATTTATTTTGGAATaGGCGTTTGGAAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPVFILE*AFGRAK
Trigger: CTTGGCTCTTCCAAACGCCCATTCCAAAATAAATAC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTTGCTCATAGACCAGTaGAATGTGAGCCCAGGATTA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLLIDQ*NVSPGL
Trigger: TAATCCTGGGCTCACATTCCACTGGTCTATGAGCAA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATTGTATGGACAACCATaGCAAAGTTATGCTCTACTG +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLYGQP*QSYALL
Trigger: CAGTAGAGCATAACTTTGCCATGGTTGTCCATACAA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCGATATCTTGTTTGTaGCTAAGAACCAATTCTGAC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCPISCL*LRTNSD
Trigger: GTCAGAATTGGTTCTTAGCCACAAACAAGATATCGG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTCTGTCACTCTCCCTTaGACCATTTTTGCAACTTGG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLSVTLP*TIFATW
Trigger: CCAAGTTGCAAAAATGGTTCAAGGGAGAGTGACAGA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGGGCTTTTCTTCTCTaGATAGCCCACAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLWAFLL*IAHKID
Trigger: GTCAATTTTGTGGGCTATTCAGAGAAGAAAAGCCCA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTAATGTGCCGAGGAGTTaGTGTGTATTTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLNVPRS*CVFSSH
Trigger: ATGGGAAGAAAATACACATCAACTCCTCGGCACATT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGAACTGTTCATGCAGTaGACAGTGACCTTGATACTG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLELFMQ*TVTLIL
Trigger: CAGTATCAAGGTCACTGTTCACTGCATGAACAGTTC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCTAGCAAAGTATTACTaGACTGTACATGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLAKYY*TVHGTA
Trigger: TGCTGTGCCATGTACAGTTCAGTAATACTTTGCTAG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAGGCTCAACAGTAACTaGATCATGATGGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLRLNSN*IMMGGM
Trigger: CATTCCACCCATCATGATGCAGTTACTGTTGAGCCT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATTCACGGTAGTTAGTTaGTCTTCAAAGTACTCCTTA +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPFTVVS*SSKYSL
Trigger: TAAGGAGTACTTTGAAGAGCAACTAACTACCGTGAA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTGGCAGCCACACTTGTaGTATTCCAATCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLWQPHL*YSNLLC
Trigger: ACAGAGAAGATTGGAATAGCACAAGTGTGGCTGCCA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTATGGCAGAAGCCAACTaGAGTTTGAGTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLMAEAN*SLSSMF
Trigger: AAACATGGAACTCAAACTGCAGTTGGCTTCTGCCAT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGAAACACTTCAATGTaGCGAGGAGTTGATGTGTAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGNTSM*RGVDVY
Trigger: ATACACATCAACTCCTCGGCACATTGAAGTGTTTCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCTTCAGACATTACCTaGATCATATTCATTGGAATC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPSDIT*IIFIGI
Trigger: GATTCCAATGAATATGATGCAGGTAATGTCTGAAGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTAGAAAAACCTCTGAATaGCTGGGCACTAGATCCAAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLRKTSE*LGTRSN
Trigger: ATTGGATCTAGTGCCCAGGCATTCAGAGGTTTTTCT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAAATTCCCCTCAAACTaGCCAGAGGAACTGTTCATG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLKFPSN*PEELFM
Trigger: CATGAACAGTTCCTCTGGGCAGTTTGAGGGGAATTT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGAATGAGGATTCGTTaGATTCCATTCTTGCTACGT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGMRIR*IPFLLR
Trigger: ACGTAGCAAGAATGGAATGCAACGAATCCTCATTCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTCACAGCGTAGCTCATaGTCAGTCACTATTTCTCGA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLSQRSS*SVTISR
Trigger: TCGAGAAATAGTGACTGACCATGAGCTACGCTGTGA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGCTCTACAACATATATaGTGCAATTTGGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLALQHI*CNLGVQ
Trigger: CTGGACTCCCAAATTGCACCATATATGTTGTAGAGC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCTGAAGTATTTATTTTaGAATGGGCGTTTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCLKYLF*NGRLEE
Trigger: CTCTTCCAAACGCCCATTCCAAAATAAATACTTCAG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTAAACCTCTGAATGCCTaGGCACTAGATCCAATACAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLKPLNA*ALDPIH
Trigger: ATGTATTGGATCTAGTGCCCAGGCATTCAGAGGTTT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCCTGCTGCTTTTGTATaGACAACCATGGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLPAAFV*TTMAKL
Trigger: TAACTTTGCCATGGTTGTCCATACAAAAGCAGCAGG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTCTGGTTGGCACTCTaGATAGAAGAGTTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLLWLAL*IEELEF
Trigger: AAACTCCAACTCTTCTATCCAGAGTGCCAACCAGAG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTGTTTTCACTACTCCTaGGATGTCATGAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKCFHYS*DVMKNH
Trigger: ATGATTTTTCATGACATCCCAGGAGTAGTGAAAACA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCAGCATGAGGGTCGCTaGAAGAAGTACTTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLQHEGR*KKYFCN
Trigger: ATTACAAAAGTACTTCTTCCAGCGACCCTCATGCTG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTGTATGCTAGGAAGATaGAAGCTGTTGATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLCMLGR*KLLMPA
Trigger: TGCTGGCATCAACAGCTTCCATCTTCCTAGCATACA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTGGTACATACACAACTaGAACTGTTTGTATCTTGTT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQWYIHN*NCLYLV
Trigger: AACAAGATACAAACAGTTCCAGTTGTGTATGTACCA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCTCAGAAGCCTTATCTaGAAACTTAATGTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLRSLI*KLNVEV
Trigger: AACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCTCAGAAGCCTTATCTaGAAACTTAATGTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKLRSLI*KLNVEV
Trigger: AACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAATGTGCCGAGGAGTTaGTGTGTATTTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLNVPRS*CVFSSH
Trigger: ATGGGAAGAAAATACACATCAACTCCTCGGCACATT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCCTGAGAAAACACAATaGCTTTGCCAGTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLPEKTQ*LCQYLH
Trigger: ATGAAGATACTGGCAAAGTCATTGTGTTTTCTCAGG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTAACAGCCCTTAGCTaGACAACTTCAATCTGTACT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLLTALS*TTSICT
Trigger: AGTACAGATTGAAGTTGTTCAGCTAAGGGCTGTTAG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGAGCTTGAATACAGTTaGATTGAGGGTATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLELEYS*IEGIGE
Trigger: CTCACCAATACCCTCAATTCAACTGTATTCAAGCTC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGCGGAATCTTCACAGTaGTCTTTCTCCATACTGAAA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLAESSQ*SFSILK
Trigger: TTTCAGTATGGAGAAAGATCACTGTGAAGATTCCGC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368553.5
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTATGAGACCCGTTAAGTaGAACTCTATGGTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLMRPVK*NSMVLQ
Trigger: TTGCAAGACCATAGAGTTGCACTTAACGGGTCTCAT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR GCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAGAAAAACCTCTGAATaGCTGGGCACTAGATCCAAT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLRKTSE*LGTRSN
Trigger: ATTGGATCTAGTGCCCAGGCATTCAGAGGTTTTTCT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCACCATCAGTTCCAGTaGCGAATCATCTACATAAAG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLHHQFQ*RIIYIK
Trigger: CTTTATGTAGATGATTCGCCACTGGAACTGATGGTG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCTCAGCTATATATATTaGGGGAGCATATTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLSYIY*GSIFCF
Trigger: GAAGCAGAATATGCTCCCCCAATATATATAGCTGAG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAATGCCATGGCTTCTTTaGTCTCTTTATTTATGTGAT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPMPWLL*SLYLCD
Trigger: ATCACATAAATAAAGAGACCAAAGAAGCCATGGCAT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTATGCCATGGCTTCTTTaGTCTCTTTATTTATGTGAT +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCMPWLL*SLYLCD
Trigger: ATCACATAAATAAAGAGACCAAAGAAGCCATGGCAT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGTATTTATTTTGGAATaGGCGTTTGGAAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLVFILE*AFGRAK
Trigger: CTTGGCTCTTCCAAACGCCCATTCCAAAATAAATAC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCTGCATCATATTCATTaGAATCAGTGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCLHHIH*NQCHFL
Trigger: GAGAAAATGACACTGATTCCAATGAATATGATGCAG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACTGCATCATATTCATTaGAATCAGTGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLHHIH*NQCHFL
Trigger: GAGAAAATGACACTGATTCCAATGAATATGATGCAG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCAGCATGAGGGTCGCTaGAAGAAGTACTTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLQHEGR*KKYFCN
Trigger: ATTACAAAAGTACTTCTTCCAGCGACCCTCATGCTG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATGGTACATACACAACTaGAACTGTTTGTATCTTGTT +
Preference number: 4 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPWYIHN*NCLYLV
Trigger: AACAAGATACAAACAGTTCCAGTTGTGTATGTACCA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTATCTGTACTTCATCCTaGGAAAACACAATGACTTTG +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLICTSS*ENTMTL
Trigger: CAAAGTCATTGTGTTTTCTCAGGATGAAGTACAGAT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR TCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGTATGGAGTTTGAGCTaGGAATTTATAGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLVWSLS*EFIGIR
Trigger: TCTGATGCCTATAAATTCTCAGCTCAAACTCCATAC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR GCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTTCACGGTAGTTAGTTaGTCTTCAAAGTACTCCTTA +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLFTVVS*SSKYSL
Trigger: TAAGGAGTACTTTGAAGAGCAACTAACTACCGTGAA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCATCGGTTTCCAGGTTaGACAGTGAAACCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLHRFPG*TVKPKN
Trigger: ATTTTTAGGTTTCACTGTCCAACCTGGAAACCGATG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTTGTATGGACAACCATaGCAAAGTTATGCTCTACTG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLLYGQP*QSYALL
Trigger: CAGTAGAGCATAACTTTGCCATGGTTGTCCATACAA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCCAGTTATGGTTGTTTaGTTGACTCCAAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLPVMVV*LTPKGS
Trigger: AGAACCTTTTGGAGTCAACCAAACAACCATAACTGG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTGAAGTATTTATTTTaGAATGGGCGTTTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLLKYLF*NGRLEE
Trigger: CTCTTCCAAACGCCCATTCCAAAATAAATACTTCAG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CCA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGTTTTCACTACTCCTaGGATGTCATGAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLCFHYS*DVMKNH
Trigger: ATGATTTTTCATGACATCCCAGGAGTAGTGAAAACA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CCA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTGGTACATACACAACTaGAACTGTTTGTATCTTGTT +
Preference number: 4 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLWYIHN*NCLYLV
Trigger: AACAAGATACAAACAGTTCCAGTTGTGTATGTACCA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 90 bp AGAGCCCGAAGCCTCGGCGTCTTGATGACGCCGGACAGCCAGTCATaGCGACTGCCAGGTCTCGGGTTCCCGCTCAACTACAGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: RARSLGVLMTPDSQS*RLPGLGFPLNYSRL
Trigger: GAGCCGGCTGTAGTTGAGCGGGAACCCGAGACCTGGCAGTCGCCATGACTGGCTGTCCGGCGTCATCAAGACGCCGAGGCTTCGGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 90 bp GGAAATGCTGACAGGGTCCTTCCTTGGGCTGTGTATAGCTTGGGTTaGCTGCTCACTCGCAGGTATGTCACCGGTGCTACCTGGACCCCA +
Preference number: 5 (lower is better)
Translates to: GNADRVLPWAVYSLG*LLTRRYVTGATWTP
Trigger: TGGGGTCCAGGTAGCACCGGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCCTGTCAGCATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS GCA 90 bp ATGCTGACAGGGTCCTTCCTTGGGCTGTGTATAGCTTGGGTTGGCTaGTCACTCGCAGGTATGTCACCGGTGCTACCTGGACCCCAGTTA +
Preference number: 5 (lower is better)
Translates to: MLTGSFLGLCIAWVG*SLAGMSPVLPGPQL
Trigger: TAACTGGGGTCCAGGTAGCACCGGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCCTGTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 90 bp CCAAGGGAAATGCTGACAGGGTCCTTCCTTGGGCTGTGTATAGCTTaGGTTGGCTGCTCACTCGCAGGTATGTCACCGGTGCTACCTGGA +
Preference number: 5 (lower is better)
Translates to: PREMLTGSFLGLCIA*VGCSLAGMSPVLPG
Trigger: TCCAGGTAGCACCGGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCCTGTCAGCATTTCCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS GCA 90 bp CTGGCTCAATGGCATGCTCTACAGCAACAGGAATATAATCTGCCATaGCTGGATGTCTCCGGTCCCAAAGCCCCACAAGTGTCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: LAQWHALQQQEYNLP*LDVSGPKAPQVSAL
Trigger: GAGGGCTGACACTTGTGGGGCTTTGGGACCGGAGACATCCAGGCATGGCAGATTATATTCCTGTTGCTGTAGAGCATGCCATTGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 90 bp AGGACATGGCTGGGCACCAGCTGGCACCTTGTATACTGGAGTTACTaGCATACTGGCAGGGTGGGCACAAATGAAGCGAACCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: RTWLGTSWHLVYWSY*HTGRVGTNEANLQN
Trigger: GTTTTGCAGGTTCGCTTCATTTGTGCCCACCCTGCCAGTATGTCAGTAACTCCAGTATACAAGGTGCCAGCTGGTGCCCAGCCATGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 90 bp GGTGTCTGGCTCAATGGCATGCTCTACAGCAACAGGAATATAATCTaGCATGCCTGGATGTCTCCGGTCCCAAAGCCCCACAAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: GVWLNGMLYSNRNII*HAWMSPVPKPHKCQ
Trigger: CTGACACTTGTGGGGCTTTGGGACCGGAGACATCCAGGCATGGCAGATTATATTCCTGTTGCTGTAGAGCATGCCATTGAGCCAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 90 bp CTCAATGGCATGCTCTACAGCAACAGGAATATAATCTGCCATGCCTaGATGTCTCCGGTCCCAAAGCCCCACAAGTGTCAGCCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: LNGMLYSNRNIICHA*MSPVPKPHKCQPSV
Trigger: AACAGAGGGCTGACACTTGTGGGGCTTTGGGACCGGAGACATCCAGGCATGGCAGATTATATTCCTGTTGCTGTAGAGCATGCCATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACGAAGCCTCGGCGTCTaGATGACGCCGGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPRSLGV*MTPDSQ
Trigger: CTGGCTGTCCGGCGTCATCAAGACGCCGAGGCTTCG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCGAAGCCTCGGCGTCTaGATGACGCCGGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCRSLGV*MTPDSQ
Trigger: CTGGCTGTCCGGCGTCATCAAGACGCCGAGGCTTCG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 90 bp GGCAGGGTGGGCACAAATGAAGCGAACCTGCAAAACCTCTACAGCTaGACTAGGGTTCAGGACACCTGGATGATTTCCAATTCGGAATGT +
Preference number: 5 (lower is better)
Translates to: GRVGTNEANLQNLYS*TRVQDTWMISNSEC
Trigger: ACATTCCGAATTGGAAATCATCCAGGTGTCCTGAACCCTAGTCCAGCTGTAGAGGTTTTGCAGGTTCGCTTCATTTGTGCCCACCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTGGGCTGTGTATAGCTaGGGTTGGCTGCTCACTCGC +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKWAVYS*GWLLTR
Trigger: GCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 90 bp TCCAACAAATTCCCCTCAAACTGCCCAGAGGAACTGTTCATGCAGTaGACAGTGACCTTGATACTGGTCCTGCCTGCTGCTTTTGTATGG +
Preference number: 5 (lower is better)
Translates to: SNKFPSNCPEELFMQ*TVTLILVLPAAFVW
Trigger: CCATACAAAAGCAGCAGGCAGGACCAGTATCAAGGTCACTGTTCACTGCATGAACAGTTCCTCTGGGCAGTTTGAGGGGAATTTGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGGCACGTTAAGTTTGTaGGCCAGGGTCCCACGCAAA +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQGTLSL*ARVPRK
Trigger: TTTGCGTGGGACCCTGGCCAACAAACTTAACGTGCC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTGTGGCACGTTAAGTTaGTTGGCCAGGGTCCCACGC +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCCGTLS*LARVPR
Trigger: GCGTGGGACCCTGGCCAACAAACTTAACGTGCCACA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 90 bp ACCTGCAAAACCTCTACAGCTGGACTAGGGTTCAGGACACCTGGATaGTTTCCAATTCGGAATGTGAGAACTTGTTCCCCTAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: TCKTSTAGLGFRTPG*FPIRNVRTCSPKSR
Trigger: CCTGGATTTAGGGGAACAAGTTCTCACATTCCGAATTGGAAATCATCCAGGTGTCCTGAACCCTAGTCCAGCTGTAGAGGTTTTGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 90 bp TTGTACATCTCGGGCCAAAACAGTACTATTCCCCCTGACCTGACCTaGAGTCACCACTCCTTTCGTGGTTACTATGACCACTGTTTCATT +
Preference number: 5 (lower is better)
Translates to: LYISGQNSTIPPDLT*SHHSFRGYYDHCFI
Trigger: AATGAAACAGTGGTCATAGTAACCACGAAAGGAGTGGTGACTGCAGGTCAGGTCAGGGGGAATAGTACTGTTTTGGCCCGAGATGTACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 90 bp GGAACTGTTCATGCAGTGAACAGTGACCTTGATACTGGTCCTGCCTaGTGCTTTTGTATGGACAACCATGGCAAAGTTATGCTCTACTGG +
Preference number: 5 (lower is better)
Translates to: GTVHAVNSDLDTGPA*CFCMDNHGKVMLYW
Trigger: CCAGTAGAGCATAACTTTGCCATGGTTGTCCATACAAAAGCAGCAGGCAGGACCAGTATCAAGGTCACTGTTCACTGCATGAACAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 90 bp CAGGCATTGGATCCGGTAGATGTACTGGTTCTGTTTTCTCTTAGATaGCAGCCACACTTGTGCTATTCCAATCTTCTCTGTCTTCTCCGC +
Preference number: 5 (lower is better)
Translates to: QALDPVDVLVLFSLR*QPHLCYSNLLCLLR
Trigger: GCGGAGAAGACAGAGAAGATTGGAATAGCACAAGTGTGGCTGCCATCTAAGAGAAAACAGAACCAGTACATCTACCGGATCCAATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGGCACGTTAAGTTTGTaGGCCAGGGTCCCACGCAAA +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCGTLSL*ARVPRK
Trigger: TTTGCGTGGGACCCTGGCCAACAAACTTAACGTGCC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTCTCTTGCTGACTCGTaGTCCTGGGCAATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCSLADS*SWAMLH
Trigger: GTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGAAGTCCAGGTAAAGTaGCCACTGCCACCCTCTACC +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCEVQVK*PLPPST
Trigger: GGTAGAGGGTGGCAGTGGCAACTTTACCTGGACTTC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGCCACAAGTGTGGTTaGCCCAATAGTGGTAGCTCG +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKSHKCG*PNSGSS
Trigger: CGAGCTACCACTATTGGGCAAACCACACTTGTGGCT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGAGCCCAGGATTAGCATaGCTGAAGGAGAAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQSPGLA*LKEKGV
Trigger: GACCCCTTTCTCCTTCAGCAATGCTAATCCTGGGCT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGAGCCAGTGAACCGCTaGAGGATGGCGGAATCTTCA +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCEPVNR*RMAESS
Trigger: TGAAGATTCCGCCATCCTCAAGCGGTTCACTGGCTC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 90 bp TATTTCAACCTTATCAATCAGATCAAGCTCCAGCTCTTGTATGTCTaGCACCCTGAGGTGGGCTGTTGCTGGACCCAAGAAAGCCAAACA +
Preference number: 5 (lower is better)
Translates to: YFNLINQIKLQLLYV*HPEVGCCWTQESQT
Trigger: TGTTTGGCTTTCTTGGGTCCAGCAACAGCCCACCTCAGGGTGTCAGACATACAAGAGCTGGAGCTTGATCTGATTGATAAGGTTGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 90 bp CCCTCTGTTCACAGCCTGGGCCATGTAAGTATAGTTCTTATTCCCTaGTCCAATATGCAGCAAGTCATCTCTGTTCAGAGCCAGATAAAG +
Preference number: 5 (lower is better)
Translates to: PSVHSLGHVSIVLIP*SNMQQVISVQSQIK
Trigger: CTTTATCTGGCTCTGAACAGAGATGACTTGCTGCATATTGGACCAGGGAATAAGAACTATACTTACATGGCCCAGGCTGTGAACAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGCTGAGGCGTATCGGTaGCGTAGATTCAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCAEAYR*RRFSNE
Trigger: CTCATTGCTGAATCTACGCAACCGATACGCCTCAGC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTTTTGGAATGGGCGTTaGGAAGAGCCAAGAACCCTC +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKFWNGR*EEPRTL
Trigger: GAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAAA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAGTATTCGTCCTGTaGCTCCATTGGTGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKRVFVL*LHWCQG
Trigger: ACCCTGACACCAATGGAGCAACAGGACGAATACTCT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCCACAAGTGTGGTTaGCCCAATAGTGGTAGCTCG +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPSHKCG*PNSGSS
Trigger: CGAGCTACCACTATTGGGCAAACCACACTTGTGGCT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCTTCCCATCTTGTCCTaGGCAATAGCCACAAGTGTG +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLPILS*AIATSV
Trigger: CACACTTGTGGCTATTGCCAAGGACAAGATGGGAAG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAGCCCAGGATTAGCATaGCTGAAGGAGAAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCSPGLA*LKEKGV
Trigger: GACCCCTTTCTCCTTCAGCAATGCTAATCCTGGGCT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTGGGCTGTGTATAGCTaGGGTTGGCTGCTCACTCGC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLWAVYS*GWLLTR
Trigger: GCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCCAACAAAGGTAAGCTaGGTGTCTGGCTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQPTKVS*VSGSMA
Trigger: TGCCATTGAGCCAGACACCAAGCTTACCTTTGTTGG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTGTCATGAAAAATCATaGCAGTCCCCGGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKCHEKS*QSPDSW
Trigger: CCAGGAGTCCGGGGACTGCAATGATTTTTCATGACA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGGAAGATGGAAGCTGTaGATGCCAGCACTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKGRWKL*MPALQR
Trigger: TCTTTGCAGTGCTGGCATCAACAGCTTCCATCTTCC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 90 bp GAAAAATCATTGCAGTCCCCGGACTCCTGGCCACTCCTACTCCAGTaGCAATGTCTGTCTGTAGAATATTGTTGGCAGAAATCATCCATA +
Preference number: 5 (lower is better)
Translates to: EKSLQSPDSWPLLLQ*QCLSVEYCWQKSSI
Trigger: TATGGATGATTTCTGCCAACAATATTCTACAGACAGACATTGTCACTGGAGTAGGAGTGGCCAGGAGTCCGGGGACTGCAATGATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 90 bp GCACCCAACTTATCTTTCATAGCCCTCACTACCACTGCCTCACTTTaGCTGGTGAGTACACAGGAAATATTGATGAAAACAGGTGATGCC +
Preference number: 5 (lower is better)
Translates to: APNLSFIALTTTASL*LVSTQEILMKTGDA
Trigger: GGCATCACCTGTTTTCATCAATATTTCCTGTGTACTCACCAGTCAAAGTGAGGCAGTGGTAGTGAGGGCTATGAAAGATAAGTTGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS CCA 90 bp AAAAGTATTTCCTTCAGCATCCAATGCCCTCACCATCAGTTCCAGTaGCGAATCATCTACATAAAGTTCCCGGGCCCGAGATACAATTTC +
Preference number: 5 (lower is better)
Translates to: KSISFSIQCPHHQFQ*RIIYIKFPGPRYNF
Trigger: GAAATTGTATCTCGGGCCCGGGAACTTTATGTAGATGATTCGCCACTGGAACTGATGGTGAGGGCATTGGATGCTGAAGGAAATACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTCTCTTGCTGACTCGTaGTCCTGGGCAATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLSLADS*SWAMLH
Trigger: GTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGTCACCATGGCTGTTTaGTCATCCAGTATAGCCACT +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQVTMAV*SSSIAT
Trigger: AGTGGCTATACTGGATGACAAAACAGCCATGGTGAC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGTCACCATGGCTGTTTaGTCATCCAGTATAGCCACT +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKVTMAV*SSSIAT
Trigger: AGTGGCTATACTGGATGACAAAACAGCCATGGTGAC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTACAGGAATCAGCCATTaGTTGTGCTGTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCTGISH*LCCGRG
Trigger: TCCTCTGCCACAGCACAACAAATGGCTGATTCCTGT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTTTTGGAATGGGCGTTaGGAAGAGCCAAGAACCCTC +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCFWNGR*EEPRTL
Trigger: GAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAAA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGAGTATTCGTCCTGTaGCTCCATTGGTGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPRVFVL*LHWCQG
Trigger: ACCCTGACACCAATGGAGCAACAGGACGAATACTCT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCAACAAAGGTAAGCTaGGTGTCTGGCTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPTKVS*VSGSMA
Trigger: TGCCATTGAGCCAGACACCAAGCTTACCTTTGTTGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTGTCATGAAAAATCATaGCAGTCCCCGGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCCHEKS*QSPDSW
Trigger: CCAGGAGTCCGGGGACTGCAATGATTTTTCATGACA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGAGCCAGTGAACCGCTaGAGGATGGCGGAATCTTCA +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLEPVNR*RMAESS
Trigger: TGAAGATTCCGCCATCCTCAAGCGGTTCACTGGCTC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 90 bp GGAGTATTTAAGAATCCTAATTTTGCTAGACAGTTCTTCTCTTGCTaGCTCGTTGTCCTGGGCAATGCTCCACTCAAACATCATCCCTGC +
Preference number: 5 (lower is better)
Translates to: GVFKNPNFARQFFSC*LVVLGNAPLKHHPC
Trigger: GCAGGGATGATGTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTGTCTAGCAAAATTAGGATTCTTAAATACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 90 bp TCCTGTTGCTCCATTGGTGTCAGGGTGACAATGGCAGAAGCCAACTaGAGTTTGAGTTCCATGTTTCTGAAGTATTTATTTTGGAATGGG +
Preference number: 5 (lower is better)
Translates to: SCCSIGVRVTMAEAN*SLSSMFLKYLFWNG
Trigger: CCCATTCCAAAATAAATACTTCAGAAACATGGAACTCAAACTGCAGTTGGCTTCTGCCATTGTCACCCTGACACCAATGGAGCAACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGCTGAGGCGTATCGGTaGCGTAGATTCAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLAEAYR*RRFSNE
Trigger: CTCATTGCTGAATCTACGCAACCGATACGCCTCAGC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCTCTGTCACTCTCCCTaGAACCATTTTTGCAACTTG +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLCHSP*NHFCNL
Trigger: CAAGTTGCAAAAATGGTTCAAGGGAGAGTGACAGAG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGCACCAGCTGGCACCTaGTATACTGGAGTTACTGAC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLAPAGT*YTGVTD
Trigger: GTCAGTAACTCCAGTATACAAGGTGCCAGCTGGTGC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCTGTGTCCCTCAGTCTaGATACAGGAATCAGCCATT +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCLCPSV*IQESAI
Trigger: AATGGCTGATTCCTGTATCAAGACTGAGGGACACAG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTGGGCTAGTGTTTCATaGGAGGATTTCCATTCTAGC +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQWASVS*EDFHSS
Trigger: GCTAGAATGGAAATCCTCCAATGAAACACTAGCCCA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGAAGCCAACTGCAGTTaGAGTTCCATGTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQEANCS*SSMFLK
Trigger: CTTCAGAAACATGGAACTCAAACTGCAGTTGGCTTC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCAATGTGCCGAGGAGTaGATGTGTATTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQQCAEE*MCIFFP
Trigger: TGGGAAGAAAATACACATCAACTCCTCGGCACATTG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAATCTTCCCTGTAACTaGCCCCCTCCTATTAACAAC +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKNLPCN*PPPINN
Trigger: GTTGTTAATAGGAGGGGGCAAGTTACAGGGAAGATT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTAGCCCAGGATTAGCATaGCTGAAGGAGAAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLSPGLA*LKEKGV
Trigger: GACCCCTTTCTCCTTCAGCAATGCTAATCCTGGGCT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCCCAGTTATGGTTGTTaGGTTGACTCCAAAAGGTTC +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQPSYGC*VDSKRF
Trigger: GAACCTTTTGGAGTCAACCAAACAACCATAACTGGG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGCAGTTAAGAGAAACTaGTCCAAGCAGAGGTTAGTG +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQAVKRN*SKQRLV
Trigger: CACTAACCTCTGCTTGGACAAGTTTCTCTTAACTGC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACGTTGCATTCCATTCTaGCTACGTTCACTGACCAGT +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPRCIPF*LRSLTS
Trigger: ACTGGTCAGTGAACGTAGCAAGAATGGAATGCAACG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS TCA 90 bp GTCACCATGGCTGTTTTGTCATCCAGTATAGCCACTTTCTCAGAATaGGACCCGTTAAGTGCAACTCTATGGTCTTGCAATTCCAGTATA +
Preference number: 5 (lower is better)
Translates to: VTMAVLSSSIATFSE*DPLSATLWSCNSSI
Trigger: TATACTGGAATTGCAAGACCATAGAGTTGCACTTAACGGGTCTCATTCTGAGAAAGTGGCTATACTGGATGACAAAACAGCCATGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 90 bp ACAGTGATCTGCACCCAACTTATCTTTCATAGCCCTCACTACCACTaGCTCACTTTGACTGGTGAGTACACAGGAAATATTGATGAAAAC +
Preference number: 5 (lower is better)
Translates to: TVICTQLIFHSPHYH*LTLTGEYTGNIDEN
Trigger: GTTTTCATCAATATTTCCTGTGTACTCACCAGTCAAAGTGAGGCAGTGGTAGTGAGGGCTATGAAAGATAAGTTGGGTGCAGATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS CCA 90 bp ATCCTAATTTTGCTAGACAGTTCTTCTCTTGCTGACTCGTTGTCCTaGGCAATGCTCCACTCAAACATCATCCCTGCCAAACTACTAAAA +
Preference number: 5 (lower is better)
Translates to: ILILLDSSSLADSLS*AMLHSNIIPAKLLK
Trigger: TTTTAGTAGTTTGGCAGGGATGATGTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTGTCTAGCAAAATTAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 90 bp GAGCTGAGAATTTATAGGCATCAGAATCTGCTCTGGTTGGCACTCTaGATAGAAGAGTTGGAGTTTTTCAAACACCAGGATCTGTACTTC +
Preference number: 5 (lower is better)
Translates to: ELRIYRHQNLLWLAL*IEELEFFKHQDLYF
Trigger: GAAGTACAGATCCTGGTGTTTGAAAAACTCCAACTCTTCTATCCAGAGTGCCAACCAGAGCAGATTCTGATGCCTATAAATTCTCAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 90 bp GGTATGGAGTTTGAGCTGAGAATTTATAGGCATCAGAATCTGCTCTaGTTGGCACTCTGGATAGAAGAGTTGGAGTTTTTCAAACACCAG +
Preference number: 5 (lower is better)
Translates to: GMEFELRIYRHQNLL*LALWIEELEFFKHQ
Trigger: CTGGTGTTTGAAAAACTCCAACTCTTCTATCCAGAGTGCCAACCAGAGCAGATTCTGATGCCTATAAATTCTCAGCTCAAACTCCATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 90 bp AGTACTGAAGCAGATGATATCTCCAACAAAGGTAAGCTTGGTGTCTaGCTCAATGGCATGCTCTACAGCAACAGGAATATAATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: STEADDISNKGKLGV*LNGMLYSNRNIICH
Trigger: ATGGCAGATTATATTCCTGTTGCTGTAGAGCATGCCATTGAGCCAGACACCAAGCTTACCTTTGTTGGAGATATCATCTGCTTCAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 90 bp ACTTTACTTGCTGGAATGTCTAGCAAAGTATTACTGAACTGTACATaGCACAGCATGAGGGTCGCTGGAAGAAGTACTTTTGTAATGGCC +
Preference number: 5 (lower is better)
Translates to: TLLAGMSSKVLLNCT*HSMRVAGRSTFVMA
Trigger: GGCCATTACAAAAGTACTTCTTCCAGCGACCCTCATGCTGTGCCATGTACAGTTCAGTAATACTTTGCTAGACATTCCAGCAAGTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGAATGAGTACAGCTTTTaGGGAACACAAGGTGCCATT +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQNEYSF*GTQGAI
Trigger: AATGGCACCTTGTGTTCCCAAAAAGCTGTACTCATT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGGAAATGCCAGAAATTaGGGTGTAAGCATGATGGGA +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPGNARN*GVSMMG
Trigger: TCCCATCATGCTTACACCCAAATTTCTGGCATTTCC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGATATCGAAAGGGATTTaGTACATCTCGGGCCAAAAC +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKISKGI*YISGQN
Trigger: GTTTTGGCCCGAGATGTACAAAATCCCTTTCGATAT...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGCACCAGCTGGCACCTaGTATACTGGAGTTACTGAC +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLAPAGT*YTGVTD
Trigger: GTCAGTAACTCCAGTATACAAGGTGCCAGCTGGTGC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGAATCAGCCATTTGTaGTGCTGTGGCAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGISHL*CCGRGH
Trigger: ATGTCCTCTGCCACAGCACAACAAATGGCTGATTCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTACAGGAATCAGCCATTaGTTGTGCTGTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLTGISH*LCCGRG
Trigger: TCCTCTGCCACAGCACAACAAATGGCTGATTCCTGT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGCACTGCCATCATCTTTaGCTACCATTTCCACTGATT +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKHCHHL*LPFPLI
Trigger: AATCAGTGGAAATGGTAGCAAAAGATGATGGCAGTG...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGACAGATCTGGGCAAGTaGGAAATTTCTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQTDLGK*EISFGL
Trigger: AAGCCCAAAAGAAATTTCCAACTTGCCCAGATCTGT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCTTCCCATCTTGTCCTaGGCAATAGCCACAAGTGTG +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLPILS*AIATSV
Trigger: CACACTTGTGGCTATTGCCAAGGACAAGATGGGAAG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTATTTTCTTCCCATCTaGTCCTTGGCAATAGCCACA +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKYFLPI*SLAIAT
Trigger: TGTGGCTATTGCCAAGGACAAGATGGGAAGAAAATA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCAATGTGCCGAGGAGTaGATGTGTATTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCQCAEE*MCIFFP
Trigger: TGGGAAGAAAATACACATCAACTCCTCGGCACATTG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACAATGTGCCGAGGAGTaGATGTGTATTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPQCAEE*MCIFFP
Trigger: TGGGAAGAAAATACACATCAACTCCTCGGCACATTG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAATCTTCCCTGTAACTaGCCCCCTCCTATTAACAAC +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPNLPCN*PPPINN
Trigger: GTTGTTAATAGGAGGGGGCAAGTTACAGGGAAGATT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTCCAATACATCCCTTTaGCTCATAGACCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQSNTSL*LIDQWN
Trigger: ATTCCACTGGTCTATGAGCAAAAGGGATGTATTGGA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGAATCTTGATGATGCATaGACCACCACCTCTCGATAT +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQNLDDA*TTTSRY
Trigger: ATATCGAGAGGTGGTGGTCAATGCATCATCAAGATT...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGTGGTGATGAAGAGCTaGAATACAGTTGAATTGAGG +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKVVMKS*NTVELR
Trigger: CCTCAATTCAACTGTATTCAAGCTCTTCATCACCAC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGAAGATGGAAGCTGTaGATGCCAGCACTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGRWKL*MPALQR
Trigger: TCTTTGCAGTGCTGGCATCAACAGCTTCCATCTTCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGTTGCTGTTAGGCTTCTaGTCGAGGACTAGAAATCTT +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKLLLGF*SRTRNL
Trigger: AAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGTTGCTGTTAGGCTTCTaGTCGAGGACTAGAAATCTT +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQLLLGF*SRTRNL
Trigger: AAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGGAATGAGGATTCGTaGCATTCCATTCTTGCTACG +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPRNEDS*HSILAT
Trigger: CGTAGCAAGAATGGAATGCAACGAATCCTCATTCCT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTACCACTGCCTCACTTaGACTGGTGAGTACACAGGA +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLYHCLT*TGEYTG
Trigger: TCCTGTGTACTCACCAGTCAAAGTGAGGCAGTGGTA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS TCA 90 bp ATGAACATTTTTATGGACAAAGACAAGATTAGTCTGGCCCAGTTGTaGGGCAGTCACCATGGCTGTTTTGTCATCCAGTATAGCCACTTT +
Preference number: 5 (lower is better)
Translates to: MNIFMDKDKISLAQL*GSHHGCFVIQYSHF
Trigger: AAAGTGGCTATACTGGATGACAAAACAGCCATGGTGACTGCCTCACAACTGGGCCAGACTAATCTTGTCTTTGTCCATAAAAATGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 90 bp CTCACTTTGACTGGTGAGTACACAGGAAATATTGATGAAAACAGGTaGTGCCATTTGCTGGAAGGAAGTGAAGTTGACCACTCTTACAGA +
Preference number: 5 (lower is better)
Translates to: LTLTGEYTGNIDENR*CHLLEGSEVDHSYR
Trigger: TCTGTAAGAGTGGTCAACTTCACTTCCTTCCAGCAAATGGCATCACCTGTTTTCATCAATATTTCCTGTGTACTCACCAGTCAAAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS GCA 90 bp TTTGTCATCCAGTATAGCCACTTTCTCAGAATGAGACCCGTTAAGTaGAACTCTATGGTCTTGCAATTCCAGTATATAATGTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: FVIQYSHFLRMRPVK*NSMVLQFQYIMFQG
Trigger: CCCCTGGAACATTATATACTGGAATTGCAAGACCATAGAGTTGCACTTAACGGGTCTCATTCTGAGAAAGTGGCTATACTGGATGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATACTGGAACAATGCATaGGTCCAGGTCTTTGAATAC +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPYWNNA*VQVFEY
Trigger: GTATTCAAAGACCTGGACCAATGCATTGTTCCAGTA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACTGCTCTCCAAGTACTaGTCACATTCATTCACACTT +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPLLSKY*SHSFTL
Trigger: AAGTGTGAATGAATGTGACAAGTACTTGGAGAGCAG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGGAATCAGCCATTTGTaGTGCTGTGGCAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLGISHL*CCGRGH
Trigger: ATGTCCTCTGCCACAGCACAACAAATGGCTGATTCC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCTGTGTCCCTCAGTCTaGATACAGGAATCAGCCATT +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLCPSV*IQESAI
Trigger: AATGGCTGATTCCTGTATCAAGACTGAGGGACACAG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATATTTTCTTCCCATCTaGTCCTTGGCAATAGCCACA +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPYFLPI*SLAIAT
Trigger: TGTGGCTATTGCCAAGGACAAGATGGGAAGAAAATA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATCCAATACATCCCTTTaGCTCATAGACCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPSNTSL*LIDQWN
Trigger: ATTCCACTGGTCTATGAGCAAAAGGGATGTATTGGA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTGTCATGAAAAATCATaGCAGTCCCCGGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLCHEKS*QSPDSW
Trigger: CCAGGAGTCCGGGGACTGCAATGATTTTTCATGACA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAATCTTGATGATGCATaGACCACCACCTCTCGATAT +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPNLDDA*TTTSRY
Trigger: ATATCGAGAGGTGGTGGTCAATGCATCATCAAGATT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTAATCTTGATGATGCATaGACCACCACCTCTCGATAT +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCNLDDA*TTTSRY
Trigger: ATATCGAGAGGTGGTGGTCAATGCATCATCAAGATT...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGTGGTGATGAAGAGCTaGAATACAGTTGAATTGAGG +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCVVMKS*NTVELR
Trigger: CCTCAATTCAACTGTATTCAAGCTCTTCATCACCAC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCTGAAAGACTTTACTaGCTGGAATGTCTAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPERLY*LECLAK
Trigger: CTTTGCTAGACATTCCAGCAAGTAAAGTCTTTCAGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCTGAAAGACTTTACTaGCTGGAATGTCTAGCAAAG +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCPERLY*LECLAK
Trigger: CTTTGCTAGACATTCCAGCAAGTAAAGTCTTTCAGG...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGGAAGATGGAAGCTGTaGATGCCAGCACTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLGRWKL*MPALQR
Trigger: TCTTTGCAGTGCTGGCATCAACAGCTTCCATCTTCC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 90 bp ATTGACACCATTTCTGCCAGTGGTGATGAAGAGCTTGAATACAGTTaGATTGAGGGTATTGGTGAGATAAGTCTTGAGGTCATAACTGAG +
Preference number: 5 (lower is better)
Translates to: IDTISASGDEELEYS*IEGIGEISLEVITE
Trigger: CTCAGTTATGACCTCAAGACTTATCTCACCAATACCCTCAATTCAACTGTATTCAAGCTCTTCATCACCACTGGCAGAAATGGTGTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS GCA 90 bp TTCATTCACACTTACTGTTACCAGAGTATGGCCAAGAGATTTAGCTaGGATATGTGTACTGGAACAATGCATTGGTCCAGGTCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: FIHTYCYQSMAKRFS*DMCTGTMHWSRSLN
Trigger: ATTCAAAGACCTGGACCAATGCATTGTTCCAGTACACATATCGCAGCTAAATCTCTTGGCCATACTCTGGTAACAGTAAGTGTGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 90 bp AGACATTACCTGCATCATATTCATTGGAATCAGTGTCATTTTCTCTaGAAGAAGTCTGAATGGAGGAAACACTTCAATGTGCCGAGGAGT +
Preference number: 5 (lower is better)
Translates to: RHYLHHIHWNQCHFL*KKSEWRKHFNVPRS
Trigger: ACTCCTCGGCACATTGAAGTGTTTCCTCCATTCAGACTTCTTCCAGAGAAAATGACACTGATTCCAATGAATATGATGCAGGTAATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTTCTCAGCTATATATATaGGGGGAGCATATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCSQLYI*GEHILL
Trigger: AAGCAGAATATGCTCCCCCAATATATATAGCTGAGA...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCATATATGGTGCAATTaGGGAGTCCAGACACAGATC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLHIWCN*GVQTQI
Trigger: GATCTGTGTCTGGACTCCCAAATTGCACCATATATG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGGTAACAGTTCCATTTaGTTCAGTTTCAGGACATGT +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPGNSSI*FSFRTC
Trigger: ACATGTCCTGAAACTGAACAAAATGGAACTGTTACC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGGTAACAGTTCCATTTaGTTCAGTTTCAGGACATGT +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCGNSSI*FSFRTC
Trigger: ACATGTCCTGAAACTGAACAAAATGGAACTGTTACC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGAAGCCAACTGCAGTTaGAGTTCCATGTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLEANCS*SSMFLK
Trigger: CTTCAGAAACATGGAACTCAAACTGCAGTTGGCTTC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGCCTGCATCATATTCATaGGAATCAGTGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQPASYS*ESVSFS
Trigger: AGAAAATGACACTGATTCCAATGAATATGATGCAGG...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTAATCTTCCCTGTAACTaGCCCCCTCCTATTAACAAC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLNLPCN*PPPINN
Trigger: GTTGTTAATAGGAGGGGGCAAGTTACAGGGAAGATT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGTTATGGTTGTTTGGTaGACTCCAAAAGGTTCTATA +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKVMVVW*TPKGSI
Trigger: TATAGAACCTTTTGGAGTCAACCAAACAACCATAAC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAGCAGGTTATGGTTGTTTGGTaGACTCCAAAAGGTTCTATA +
Preference number: 5 (lower is better)
Translates to: SRTRNLHSPAVKRNLSKQVMVVW*TPKGSI
Trigger: TATAGAACCTTTTGGAGTCAACCAAACAACCATAAC...CTGCTTGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCCCAGTTATGGTTGTTaGGTTGACTCCAAAAGGTTC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLPSYGC*VDSKRF
Trigger: GAACCTTTTGGAGTCAACCAAACAACCATAACTGGG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TTGCTGTTAGGCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGGTCTGTAGAATATTGTaGGCAGAAATCATCCATATC +
Preference number: 5 (lower is better)
Translates to: LLLGFLSRTRNLHSPAVKVCRIL*AEIIHI
Trigger: GATATGGATGATTTCTGCCAACAATATTCTACAGAC...CTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 90 bp TACTCTTATCTCCCCGATATCTTGTTTGTGGCTAAGAACCAATTCTaGCTGGTTAATATAAAAGGCTGGGATGAAAGGAATGAGGATTCG +
Preference number: 5 (lower is better)
Translates to: YSYLPDILFVAKNQF*LVNIKGWDERNEDS
Trigger: CGAATCCTCATTCCTTTCATCCCAGCCTTTTATATTAACCAGTCAGAATTGGTTCTTAGCCACAAACAAGATATCGGGGAGATAAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTCTGTCACTCTCCCTaGAACCATTTTTGCAACTTG +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLLCHSP*NHFCNL
Trigger: CAAGTTGCAAAAATGGTTCAAGGGAGAGTGACAGAG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCATATATGGTGCAATTaGGGAGTCCAGACACAGATC +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLHIWCN*GVQTQI
Trigger: GATCTGTGTCTGGACTCCCAAATTGCACCATATATG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGGAAATGCCAGAAATTaGGGTGTAAGCATGATGGGA +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLGNARN*GVSMMG
Trigger: TCCCATCATGCTTACACCCAAATTTCTGGCATTTCC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAAAGAGTAAAGACTCCTaGTTTATCCATGTTCAGATC +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPKSKDS*FIHVQI
Trigger: GATCTGAACATGGATAAACAAGGAGTCTTTACTCTT...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTACTGGAACAATGCATaGGTCCAGGTCTTTGAATAC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLYWNNA*VQVFEY
Trigger: GTATTCAAAGACCTGGACCAATGCATTGTTCCAGTA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTCTGCTCTCCAAGTACTaGTCACATTCATTCACACTT +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLLSKY*SHSFTL
Trigger: AAGTGTGAATGAATGTGACAAGTACTTGGAGAGCAG...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTACAGATCTGGGCAAGTaGGAAATTTCTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLTDLGK*EISFGL
Trigger: AAGCCCAAAAGAAATTTCCAACTTGCCCAGATCTGT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCATCTGAAGTATTTATTTaGGAATGGGCGTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPSEVFI*EWAFGR
Trigger: TCTTCCAAACGCCCATTCCAAAATAAATACTTCAGA...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCACCTGCATCATATTCATaGGAATCAGTGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPPASYS*ESVSFS
Trigger: AGAAAATGACACTGATTCCAATGAATATGATGCAGG...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp TCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTCCAGTTATGGTTGTTTGGTaGACTCCAAAAGGTTCTATA +
Preference number: 5 (lower is better)
Translates to: SCRGLEIFIPLQLRETCPVMVVW*TPKGSI
Trigger: TATAGAACCTTTTGGAGTCAACCAAACAACCATAAC...TGGACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GCTTCTTGTCGAGGACTAGAAATCTTCATTCCCCTGCAGTTAAGAGAAACTTGTGGAACTGTTTGTATCTaGTTTAGGAAGGCATTGTAT +
Preference number: 5 (lower is better)
Translates to: ASCRGLEIFIPLQLRETCGTVCI*FRKALY
Trigger: ATACAATGCCTTCCTAAACAAGATACAAACAGTTCC...ACAAGTTTCTCTTAACTGCAGGGGAATGAAGATTTCTAGTCCTCGACAAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGCAGTTAAGAGAAACTaGTCCAAGCAGAGGTTAGTG +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLAVKRN*SKQRLV
Trigger: CACTAACCTCTGCTTGGACAAGTTTCTCTTAACTGC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTTGCTGTTAGGCTTCTaGTCGAGGACTAGAAATCTT +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLLLLGF*SRTRNL
Trigger: AAGATTTCTAGTCCTCGACAAGAAGCCTAACAGCAA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTCCCCGATATCTTGTTaGTGGCTAAGAACCAATTCT +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLSPISC*WLRTNS
Trigger: AGAATTGGTTCTTAGCCACAAACAAGATATCGGGGA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTATCTCCCCGATATCTaGTTTGTGGCTAAGAACCAA +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLYLPDI*FVAKNQ
Trigger: TTGGTTCTTAGCCACAAACAAGATATCGGGGAGATA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS TCA 90 bp AGAGTAAAGACTCCTTGTTTATCCATGTTCAGATCCAAGGATAAATaGGAGCAGTCTGTGAATGCCATGGCTTCTTTGGTCTCTTTATTT +
Preference number: 5 (lower is better)
Translates to: RVKTPCLSMFRSKDK*EQSVNAMASLVSLF
Trigger: AAATAAAGAGACCAAAGAAGCCATGGCATTCACAGACTGCTCTCATTTATCCTTGGATCTGAACATGGATAAACAAGGAGTCTTTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 90 bp CATTCTAGCATTAGTGAACTGAAATTATCAAACTTTCTCCTATGTTaGTCAAACACTGCTAGTTCCAGGACTGTGTCCCTCAGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: HSSISELKLSNFLLC*SNTASSRTVSLSLD
Trigger: ATCAAGACTGAGGGACACAGTCCTGGAACTAGCAGTGTTTGATCAACATAGGAGAAAGTTTGATAATTTCAGTTCACTAATGCTAGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAATGAGTACAGCTTTTaGGGAACACAAGGTGCCATT +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLNEYSF*GTQGAI
Trigger: AATGGCACCTTGTGTTCCCAAAAAGCTGTACTCATT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTTCTCAGCTATATATATaGGGGGAGCATATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLSQLYI*GEHILL
Trigger: AAGCAGAATATGCTCCCCCAATATATATAGCTGAGA...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTATATCGAAAGGGATTTaGTACATCTCGGGCCAAAAC +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLISKGI*YISGQN
Trigger: GTTTTGGCCCGAGATGTACAAAATCCCTTTCGATAT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTCCAATACATCCCTTTaGCTCATAGACCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLSNTSL*LIDQWN
Trigger: ATTCCACTGGTCTATGAGCAAAAGGGATGTATTGGA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCCTGAAAGACTTTACTaGCTGGAATGTCTAGCAAAG +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLPERLY*LECLAK
Trigger: CTTTGCTAGACATTCCAGCAAGTAAAGTCTTTCAGG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTAGTACACAGGAAATATaGATGAAAACAGGTGATGCC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLSTQEI*MKTGDA
Trigger: GGCATCACCTGTTTTCATCAATATTTCCTGTGTACT...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGTCTGTAGAATATTGTaGGCAGAAATCATCCATATC +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLVCRIL*AEIIHI
Trigger: GATATGGATGATTTCTGCCAACAATATTCTACAGAC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp GTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCTTGGAACTGTTTGTATCTaGTTTAGGAAGGCATTGTAT +
Preference number: 5 (lower is better)
Translates to: VLRSLIWKLNVEVAVRLLGTVCI*FRKALY
Trigger: ATACAATGCCTTCCTAAACAAGATACAAACAGTTCC...AAGAAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS GCA 90 bp TATAGGCTGAATATCTTTATTCTGGTAAATGATGGAGGTCAGGGATaGATTTATTACCACAACACCATCTTTCAGGGCTTTTACTATATG +
Preference number: 5 (lower is better)
Translates to: YRLNIFILVNDGGQG*IYYHNTIFQGFYYM
Trigger: CATATAGTAAAAGCCCTGAAAGATGGTGTTGTGGTAATAAATGCATCCCTGACCTCCATCATTTACCAGAATAAAGATATTCAGCCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTAAGAGTAAAGACTCCTaGTTTATCCATGTTCAGATC +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLKSKDS*FIHVQI
Trigger: GATCTGAACATGGATAAACAAGGAGTCTTTACTCTT...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTTCTGAAGTATTTATTTaGGAATGGGCGTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLSEVFI*EWAFGR
Trigger: TCTTCCAAACGCCCATTCCAAAATAAATACTTCAGA...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTCCTGCATCATATTCATaGGAATCAGTGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLPASYS*ESVSFS
Trigger: AGAAAATGACACTGATTCCAATGAATATGATGCAGG...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS-3UTR CAA 90 bp ATAGTTCTCAGAAGCCTTATCTGGAAACTTAATGTAGAAGTTGCTGTTAGGCTTGTCTGTAGAATATTGTaGGCAGAAATCATCCATATC +
Preference number: 5 (lower is better)
Translates to: IVLRSLIWKLNVEVAVRLVCRIL*AEIIHI
Trigger: GATATGGATGATTTCTGCCAACAATATTCTACAGAC...AAGCCTAACAGCAACTTCTACATTAAGTTTCCAGATAAGGCTTCTGAGAACTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 72 bp AGCCTCGGCGTCTTGATGACGCCGGACAGCCAGTCATaGCGACTGCCAGGTCTCGGGTTCCCGCTCAACTAC +
Preference number: 6 (lower is better)
Translates to: SLGVLMTPDSQS*RLPGLGFPLNY
Trigger: GTAGTTGAGCGGGAACCCGAGACCTGGCAGTCGCCATGACTGGCTGTCCGGCGTCATCAAGACGCCGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 90 bp GGCGGTGTAGACGCAAGAAGAAAAAGAGCCCGAAGCCTCGGCGTCTaGATGACGCCGGACAGCCAGTCATGGCGACTGCCAGGTCTCGGG +
Preference number: 6 (lower is better)
Translates to: GGVDARRKRARSLGV*MTPDSQSWRLPGLG
Trigger: CCCGAGACCTGGCAGTCGCCATGACTGGCTGTCCGGCGTCATCAAGACGCCGAGGCTTCGGGCTCTTTTTCTTCTTGCGTCTACACCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp GACGCAAGAAGAAAAAGAGCCCGAAGCCTCGGCGTCTaGATGACGCCGGACAGCCAGTCATGGCGACTGCCA +
Preference number: 6 (lower is better)
Translates to: DARRKRARSLGV*MTPDSQSWRLP
Trigger: TGGCAGTCGCCATGACTGGCTGTCCGGCGTCATCAAGACGCCGAGGCTTCGGGCTCTTTTTCTTCTTGCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 90 bp GGCTCTCGGCCGAAGGGTAGCAACACCTGTGGCACGTTAAGTTTGTaGGCCAGGGTCCCACGCAAAACCAGAAACAACAACAGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: GSRPKGSNTCGTLSL*ARVPRKTRNNNRRR
Trigger: CCGCCTCCTGTTGTTGTTTCTGGTTTTGCGTGGGACCCTGGCCAACAAACTTAACGTGCCACAGGTGTTGCTACCCTTCGGCCGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 90 bp CCCAAGGGAAATGCTGACAGGGTCCTTCCTTGGGCTGTGTATAGCTaGGGTTGGCTGCTCACTCGCAGGTATGTCACCGGTGCTACCTGG +
Preference number: 6 (lower is better)
Translates to: PKGNADRVLPWAVYS*GWLLTRRYVTGATW
Trigger: CCAGGTAGCACCGGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCCTGTCAGCATTTCCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS GCA 72 bp GGGTCCTTCCTTGGGCTGTGTATAGCTTGGGTTGGCTaGTCACTCGCAGGTATGTCACCGGTGCTACCTGGA +
Preference number: 6 (lower is better)
Translates to: GSFLGLCIAWVG*SLAGMSPVLPG
Trigger: TCCAGGTAGCACCGGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 72 bp GACAGGGTCCTTCCTTGGGCTGTGTATAGCTTGGGTTaGCTGCTCACTCGCAGGTATGTCACCGGTGCTACC +
Preference number: 6 (lower is better)
Translates to: DRVLPWAVYSLG*LLTRRYVTGAT
Trigger: GGTAGCACCGGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 90 bp CCTGGCTCTCGGCCGAAGGGTAGCAACACCTGTGGCACGTTAAGTTaGTTGGCCAGGGTCCCACGCAAAACCAGAAACAACAACAGGAGG +
Preference number: 6 (lower is better)
Translates to: PGSRPKGSNTCGTLS*LARVPRKTRNNNRR
Trigger: CCTCCTGTTGTTGTTTCTGGTTTTGCGTGGGACCCTGGCCAACAAACTTAACGTGCCACAGGTGTTGCTACCCTTCGGCCGAGAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp ATGCTGACAGGGTCCTTCCTTGGGCTGTGTATAGCTTaGGTTGGCTGCTCACTCGCAGGTATGTCACCGGTG +
Preference number: 6 (lower is better)
Translates to: MLTGSFLGLCIA*VGCSLAGMSPV
Trigger: CACCGGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCCTGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 72 bp CGGCCGAAGGGTAGCAACACCTGTGGCACGTTAAGTTaGTTGGCCAGGGTCCCACGCAAAACCAGAAACAAC +
Preference number: 6 (lower is better)
Translates to: RPKGSNTCGTLS*LARVPRKTRNN
Trigger: GTTGTTTCTGGTTTTGCGTGGGACCCTGGCCAACAAACTTAACGTGCCACAGGTGTTGCTACCCTTCGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp AATGCTGACAGGGTCCTTCCTTGGGCTGTGTATAGCTaGGGTTGGCTGCTCACTCGCAGGTATGTCACCGGT +
Preference number: 6 (lower is better)
Translates to: NADRVLPWAVYS*GWLLTRRYVTG
Trigger: ACCGGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCCTGTCAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 72 bp CTGGGCACCAGCTGGCACCTTGTATACTGGAGTTACTaGCATACTGGCAGGGTGGGCACAAATGAAGCGAAC +
Preference number: 6 (lower is better)
Translates to: LGTSWHLVYWSY*HTGRVGTNEAN
Trigger: GTTCGCTTCATTTGTGCCCACCCTGCCAGTATGTCAGTAACTCCAGTATACAAGGTGCCAGCTGGTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp AGGAATCAGCCATTTGTTGTGCTGTGGCAGAGGACATaGCTGGGCACCAGCTGGCACCTTGTATACTGGAGT +
Preference number: 6 (lower is better)
Translates to: RNQPFVVLWQRT*LGTSWHLVYWS
Trigger: ACTCCAGTATACAAGGTGCCAGCTGGTGCCCAGCCATGTCCTCTGCCACAGCACAACAAATGGCTGATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 72 bp TTCCCCTCAAACTGCCCAGAGGAACTGTTCATGCAGTaGACAGTGACCTTGATACTGGTCCTGCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: FPSNCPEELFMQ*TVTLILVLPAA
Trigger: AGCAGCAGGCAGGACCAGTATCAAGGTCACTGTTCACTGCATGAACAGTTCCTCTGGGCAGTTTGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS GCA 72 bp TCGGGCCAAAACAGTACTATTCCCCCTGACCTGACCTaGAGTCACCACTCCTTTCGTGGTTACTATGACCAC +
Preference number: 6 (lower is better)
Translates to: SGQNSTIPPDLT*SHHSFRGYYDH
Trigger: GTGGTCATAGTAACCACGAAAGGAGTGGTGACTGCAGGTCAGGTCAGGGGGAATAGTACTGTTTTGGCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 72 bp GACATACTGGCAGGGTGGGCACAAATGAAGCGAACCTaGAAAACCTCTACAGCTGGACTAGGGTTCAGGACA +
Preference number: 6 (lower is better)
Translates to: DILAGWAQMKRT*KTSTAGLGFRT
Trigger: TGTCCTGAACCCTAGTCCAGCTGTAGAGGTTTTGCAGGTTCGCTTCATTTGTGCCCACCCTGCCAGTATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 72 bp TGGCATGCTCTACAGCAACAGGAATATAATCTGCCATaGCTGGATGTCTCCGGTCCCAAAGCCCCACAAGTG +
Preference number: 6 (lower is better)
Translates to: WHALQQQEYNLP*LDVSGPKAPQV
Trigger: CACTTGTGGGGCTTTGGGACCGGAGACATCCAGGCATGGCAGATTATATTCCTGTTGCTGTAGAGCATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS GCA 72 bp CTCAATGGCATGCTCTACAGCAACAGGAATATAATCTaGCATGCCTGGATGTCTCCGGTCCCAAAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: LNGMLYSNRNII*HAWMSPVPKPH
Trigger: GTGGGGCTTTGGGACCGGAGACATCCAGGCATGGCAGATTATATTCCTGTTGCTGTAGAGCATGCCATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 72 bp TCCTTCAGCATCCAATGCCCTCACCATCAGTTCCAGTaGCGAATCATCTACATAAAGTTCCCGGGCCCGAGA +
Preference number: 6 (lower is better)
Translates to: SFSIQCPHHQFQ*RIIYIKFPGPR
Trigger: TCTCGGGCCCGGGAACTTTATGTAGATGATTCGCCACTGGAACTGATGGTGAGGGCATTGGATGCTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp CCGAAGGGTAGCAACACCTGTGGCACGTTAAGTTTGTaGGCCAGGGTCCCACGCAAAACCAGAAACAACAAC +
Preference number: 6 (lower is better)
Translates to: PKGSNTCGTLSL*ARVPRKTRNNN
Trigger: GTTGTTGTTTCTGGTTTTGCGTGGGACCCTGGCCAACAAACTTAACGTGCCACAGGTGTTGCTACCCTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 72 bp ACATCTCGGGCCAAAACAGTACTATTCCCCCTGACCTaGCCTGCAGTCACCACTCCTTTCGTGGTTACTATG +
Preference number: 6 (lower is better)
Translates to: TSRAKTVLFPLT*PAVTTPFVVTM
Trigger: CATAGTAACCACGAAAGGAGTGGTGACTGCAGGTCAGGTCAGGGGGAATAGTACTGTTTTGGCCCGAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp TCAAGCTCCAGCTCTTGTATGTCTGACACCCTGAGGTaGGCTGTTGCTGGACCCAAGAAAGCCAAACAAAGA +
Preference number: 6 (lower is better)
Translates to: SSSSSCMSDTLR*AVAGPKKAKQR
Trigger: TCTTTGTTTGGCTTTCTTGGGTCCAGCAACAGCCCACCTCAGGGTGTCAGACATACAAGAGCTGGAGCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 90 bp GATGGTGCCATGAACCACAGCTGTGCCAACAATCTTCCCTGTAACTaGCCCCCTCCTATTAACAACAGCCACGGTCTGATTACTGATGGA +
Preference number: 6 (lower is better)
Translates to: DGAMNHSCANNLPCN*PPPINNSHGLITDG
Trigger: TCCATCAGTAATCAGACCGTGGCTGTTGTTAATAGGAGGGGGCAAGTTACAGGGAAGATTGTTGGCACAGCTGTGGTTCATGGCACCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 72 bp TTTGTACATCTCGGGCCAAAACAGTACTATTCCCCCTaGCCTGACCTGCAGTCACCACTCCTTTCGTGGTTA +
Preference number: 6 (lower is better)
Translates to: FVHLGPKQYYSP*PDLQSPLLSWL
Trigger: TAACCACGAAAGGAGTGGTGACTGCAGGTCAGGTCAGGGGGAATAGTACTGTTTTGGCCCGAGATGTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 72 bp CTTATCAATCAGATCAAGCTCCAGCTCTTGTATGTCTaGCACCCTGAGGTGGGCTGTTGCTGGACCCAAGAA +
Preference number: 6 (lower is better)
Translates to: LINQIKLQLLYV*HPEVGCCWTQE
Trigger: TTCTTGGGTCCAGCAACAGCCCACCTCAGGGTGTCAGACATACAAGAGCTGGAGCTTGATCTGATTGATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 90 bp CTCCTGGCCACTCCTACTCCAGTGACAATGTCTGTCTGTAGAATATaGTTGGCAGAAATCATCCATATCCCAGGTTCACCATGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LLATPTPVTMSVCRI*LAEIIHIPGSPCWL
Trigger: CAGCCAGCATGGTGAACCTGGGATATGGATGATTTCTGCCAACAATATTCTACAGACAGACATTGTCACTGGAGTAGGAGTGGCCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 72 bp ACCTCTACAGCTGGACTAGGGTTCAGGACACCTGGATaGTTTCCAATTCGGAATGTGAGAACTTGTTCCCCT +
Preference number: 6 (lower is better)
Translates to: TSTAGLGFRTPG*FPIRNVRTCSP
Trigger: AGGGGAACAAGTTCTCACATTCCGAATTGGAAATCATCCAGGTGTCCTGAACCCTAGTCCAGCTGTAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp TTGCTAGACAGTTCTTCTCTTGCTGACTCGTTGTCCTaGGCAATGCTCCACTCAAACATCATCCCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: LLDSSSLADSLS*AMLHSNIIPAK
Trigger: TTTGGCAGGGATGATGTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTGTCTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp GGCACAAATGAAGCGAACCTGCAAAACCTCTACAGCTaGACTAGGGTTCAGGACACCTGGATGATTTCCAAT +
Preference number: 6 (lower is better)
Translates to: GTNEANLQNLYS*TRVQDTWMISN
Trigger: ATTGGAAATCATCCAGGTGTCCTGAACCCTAGTCCAGCTGTAGAGGTTTTGCAGGTTCGCTTCATTTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp GTCACCGGTGCTACCTGGACCCCAGTTATGGTTGTTTaGTTGACTCCAAAAGGTTCTATAGAAGTGACTTCC +
Preference number: 6 (lower is better)
Translates to: VTGATWTPVMVV*LTPKGSIEVTS
Trigger: GGAAGTCACTTCTATAGAACCTTTTGGAGTCAACCAAACAACCATAACTGGGGTCCAGGTAGCACCGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 72 bp CAAACACTGCTAGTTCCAGGACTGTGTCCCTCAGTCTaGATACAGGAATCAGCCATTTGTTGTGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: QTLLVPGLCPSV*IQESAICCAVA
Trigger: TGCCACAGCACAACAAATGGCTGATTCCTGTATCAAGACTGAGGGACACAGTCCTGGAACTAGCAGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp ATGAACCACAGCTGTGCCAACAATCTTCCCTGTAACTaGCCCCCTCCTATTAACAACAGCCACGGTCTGATT +
Preference number: 6 (lower is better)
Translates to: MNHSCANNLPCN*PPPINNSHGLI
Trigger: AATCAGACCGTGGCTGTTGTTAATAGGAGGGGGCAAGTTACAGGGAAGATTGTTGGCACAGCTGTGGTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 90 bp CTGGCCACTCCTACTCCAGTGACAATGTCTGTCTGTAGAATATTGTaGGCAGAAATCATCCATATCCCAGGTTCACCATGCTGGCTGACA +
Preference number: 6 (lower is better)
Translates to: LATPTPVTMSVCRIL*AEIIHIPGSPCWLT
Trigger: TGTCAGCCAGCATGGTGAACCTGGGATATGGATGATTTCTGCCAACAATATTCTACAGACAGACATTGTCACTGGAGTAGGAGTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 90 bp TCAATGTGCCGAGGAGTTGATGTGTATTTTCTTCCCATCTTGTCCTaGGCAATAGCCACAAGTGTGGTTTGCCCAATAGTGGTAGCTCGA +
Preference number: 6 (lower is better)
Translates to: SMCRGVDVYFLPILS*AIATSVVCPIVVAR
Trigger: TCGAGCTACCACTATTGGGCAAACCACACTTGTGGCTATTGCCAAGGACAAGATGGGAAGAAAATACACATCAACTCCTCGGCACATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 90 bp AGAAAAACCTCTGAATGCCTGGGCACTAGATCCAATACATCCCTTTaGCTCATAGACCAGTGGAATGTGAGCCCAGGATTAGCATTGCTG +
Preference number: 6 (lower is better)
Translates to: RKTSECLGTRSNTSL*LIDQWNVSPGLALL
Trigger: CAGCAATGCTAATCCTGGGCTCACATTCCACTGGTCTATGAGCAAAAGGGATGTATTGGATCTAGTGCCCAGGCATTCAGAGGTTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 72 bp AAGGCAGCTCCTTCCCTGTTGGTATGGAGTTTGAGCTaGGAATTTATAGGCATCAGAATCTGCTCTGGTTGG +
Preference number: 6 (lower is better)
Translates to: KAAPSLLVWSLS*EFIGIRICSGW
Trigger: CCAACCAGAGCAGATTCTGATGCCTATAAATTCTCAGCTCAAACTCCATACCAACAGGGAAGGAGCTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS GCA 72 bp CATGCAGTGAACAGTGACCTTGATACTGGTCCTGCCTaGTGCTTTTGTATGGACAACCATGGCAAAGTTATG +
Preference number: 6 (lower is better)
Translates to: HAVNSDLDTGPA*CFCMDNHGKVM
Trigger: CATAACTTTGCCATGGTTGTCCATACAAAAGCAGCAGGCAGGACCAGTATCAAGGTCACTGTTCACTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 72 bp ACCTTGTATACTGGAGTTACTGACATACTGGCAGGGTaGGCACAAATGAAGCGAACCTGCAAAACCTCTACA +
Preference number: 6 (lower is better)
Translates to: TLYTGVTDILAG*AQMKRTCKTST
Trigger: TGTAGAGGTTTTGCAGGTTCGCTTCATTTGTGCCCACCCTGCCAGTATGTCAGTAACTCCAGTATACAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp TCTGAATGCCTGGGCACTAGATCCAATACATCCCTTTaGCTCATAGACCAGTGGAATGTGAGCCCAGGATTA +
Preference number: 6 (lower is better)
Translates to: SECLGTRSNTSL*LIDQWNVSPGL
Trigger: TAATCCTGGGCTCACATTCCACTGGTCTATGAGCAAAAGGGATGTATTGGATCTAGTGCCCAGGCATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 90 bp AGGTATGTCACCGGTGCTACCTGGACCCCAGTTATGGTTGTTTGGTaGACTCCAAAAGGTTCTATAGAAGTGACTTCCAATACAGCAGTA +
Preference number: 6 (lower is better)
Translates to: RYVTGATWTPVMVVW*TPKGSIEVTSNTAV
Trigger: TACTGCTGTATTGGAAGTCACTTCTATAGAACCTTTTGGAGTCAACCAAACAACCATAACTGGGGTCCAGGTAGCACCGGTGACATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS TCA 72 bp ATCCATATCCCAGGTTCACCATGCTGGCTGACAAGGTaGGTACTGAAGCAGATGATATCTCCAACAAAGGTA +
Preference number: 6 (lower is better)
Translates to: IHIPGSPCWLTR*VLKQMISPTKV
Trigger: TACCTTTGTTGGAGATATCATCTGCTTCAGTACTCACCTTGTCAGCCAGCATGGTGAACCTGGGATATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 72 bp CAAAACCTCTACAGCTGGACTAGGGTTCAGGACACCTaGATGATTTCCAATTCGGAATGTGAGAACTTGTTC +
Preference number: 6 (lower is better)
Translates to: QNLYSWTRVQDT*MISNSECENLF
Trigger: GAACAAGTTCTCACATTCCGAATTGGAAATCATCCAGGTGTCCTGAACCCTAGTCCAGCTGTAGAGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp ACTAGATCCAATACATCCCTTTTGCTCATAGACCAGTaGAATGTGAGCCCAGGATTAGCATTGCTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: TRSNTSLLLIDQ*NVSPGLALLKE
Trigger: CTCCTTCAGCAATGCTAATCCTGGGCTCACATTCCACTGGTCTATGAGCAAAAGGGATGTATTGGATCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 72 bp GTCGCTGGAAGAAGTACTTTTGTAATGGCCAAGGCCTaGTTTGGGGTACAGAATCCTTTAAGATTGACACCA +
Preference number: 6 (lower is better)
Translates to: VAGRSTFVMAKA*FGVQNPLRLTP
Trigger: TGGTGTCAATCTTAAAGGATTCTGTACCCCAAACCAGGCCTTGGCCATTACAAAAGTACTTCTTCCAGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 72 bp CTAATTTTGCTAGACAGTTCTTCTCTTGCTGACTCGTaGTCCTGGGCAATGCTCCACTCAAACATCATCCCT +
Preference number: 6 (lower is better)
Translates to: LILLDSSSLADS*SWAMLHSNIIP
Trigger: AGGGATGATGTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTGTCTAGCAAAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp ACCGGTGCTACCTGGACCCCAGTTATGGTTGTTTGGTaGACTCCAAAAGGTTCTATAGAAGTGACTTCCAAT +
Preference number: 6 (lower is better)
Translates to: TGATWTPVMVVW*TPKGSIEVTSN
Trigger: ATTGGAAGTCACTTCTATAGAACCTTTTGGAGTCAACCAAACAACCATAACTGGGGTCCAGGTAGCACCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 72 bp GTACTGAAGCAGATGATATCTCCAACAAAGGTAAGCTaGGTGTCTGGCTCAATGGCATGCTCTACAGCAACA +
Preference number: 6 (lower is better)
Translates to: VLKQMISPTKVS*VSGSMACSTAT
Trigger: TGTTGCTGTAGAGCATGCCATTGAGCCAGACACCAAGCTTACCTTTGTTGGAGATATCATCTGCTTCAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 90 bp TGCTCCATTGGTGTCAGGGTGACAATGGCAGAAGCCAACTGCAGTTaGAGTTCCATGTTTCTGAAGTATTTATTTTGGAATGGGCGTTTG +
Preference number: 6 (lower is better)
Translates to: CSIGVRVTMAEANCS*SSMFLKYLFWNGRL
Trigger: CAAACGCCCATTCCAAAATAAATACTTCAGAAACATGGAACTCAAACTGCAGTTGGCTTCTGCCATTGTCACCCTGACACCAATGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 72 bp TTTATGGACAAAGACAAGATTAGTCTGGCCCAGTTGTaGGGCAGTCACCATGGCTGTTTTGTCATCCAGTAT +
Preference number: 6 (lower is better)
Translates to: FMDKDKISLAQL*GSHHGCFVIQY
Trigger: ATACTGGATGACAAAACAGCCATGGTGACTGCCTCACAACTGGGCCAGACTAATCTTGTCTTTGTCCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 72 bp TCTCGAGCAAGAATAATACTGCTGAGGCGTATCGGTTaGGTAGATTCAGCAATGAGTACAGCTTTTTGGGAA +
Preference number: 6 (lower is better)
Translates to: SRARIILLRRIG*VDSAMSTAFWE
Trigger: TTCCCAAAAAGCTGTACTCATTGCTGAATCTACGCAACCGATACGCCTCAGCAGTATTATTCTTGCTCGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 72 bp CTGGTTCTGTTTTCTCTTAGATGGCAGCCACACTTGTaGTATTCCAATCTTCTCTGTCTTCTCCGCATTCAA +
Preference number: 6 (lower is better)
Translates to: LVLFSLRWQPHL*YSNLLCLLRIQ
Trigger: TTGAATGCGGAGAAGACAGAGAAGATTGGAATAGCACAAGTGTGGCTGCCATCTAAGAGAAAACAGAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 72 bp TGCACCCAACTTATCTTTCATAGCCCTCACTACCACTaGCTCACTTTGACTGGTGAGTACACAGGAAATATT +
Preference number: 6 (lower is better)
Translates to: CTQLIFHSPHYH*LTLTGEYTGNI
Trigger: AATATTTCCTGTGTACTCACCAGTCAAAGTGAGGCAGTGGTAGTGAGGGCTATGAAAGATAAGTTGGGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS CCA 72 bp GCAGATGATATCTCCAACAAAGGTAAGCTTGGTGTCTaGCTCAATGGCATGCTCTACAGCAACAGGAATATA +
Preference number: 6 (lower is better)
Translates to: ADDISNKGKLGV*LNGMLYSNRNI
Trigger: TATATTCCTGTTGCTGTAGAGCATGCCATTGAGCCAGACACCAAGCTTACCTTTGTTGGAGATATCATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 72 bp GCTGGAATGTCTAGCAAAGTATTACTGAACTGTACATaGCACAGCATGAGGGTCGCTGGAAGAAGTACTTTT +
Preference number: 6 (lower is better)
Translates to: AGMSSKVLLNCT*HSMRVAGRSTF
Trigger: AAAAGTACTTCTTCCAGCGACCCTCATGCTGTGCCATGTACAGTTCAGTAATACTTTGCTAGACATTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 72 bp TTCTCGAGCAAGAATAATACTGCTGAGGCGTATCGGTaGCGTAGATTCAGCAATGAGTACAGCTTTTTGGGA +
Preference number: 6 (lower is better)
Translates to: FSSKNNTAEAYR*RRFSNEYSFLG
Trigger: TCCCAAAAAGCTGTACTCATTGCTGAATCTACGCAACCGATACGCCTCAGCAGTATTATTCTTGCTCGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp AGCTCGAAGAATATAATTTTCAGAGTATTCGTCCTGTaGCTCCATTGGTGTCAGGGTGACAATGGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: SSKNIIFRVFVL*LHWCQGDNGRS
Trigger: GCTTCTGCCATTGTCACCCTGACACCAATGGAGCAACAGGACGAATACTCTGAAAATTATATTCTTCGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp CAGAATCTGCTCTGGTTGGCACTCTGGATAGAAGAGTaGGAGTTTTTCAAACACCAGGATCTGTACTTCATC +
Preference number: 6 (lower is better)
Translates to: QNLLWLALWIEE*EFFKHQDLYFI
Trigger: GATGAAGTACAGATCCTGGTGTTTGAAAAACTCCAACTCTTCTATCCAGAGTGCCAACCAGAGCAGATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 90 bp TTAAGAATCCTAATTTTGCTAGACAGTTCTTCTCTTGCTGACTCGTaGTCCTGGGCAATGCTCCACTCAAACATCATCCCTGCCAAACTA +
Preference number: 6 (lower is better)
Translates to: LRILILLDSSSLADS*SWAMLHSNIIPAKL
Trigger: TAGTTTGGCAGGGATGATGTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTGTCTAGCAAAATTAGGATTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 90 bp CAGTTTCAGGACATGTATCTTAATTTCTCCATATCGAAAGGGATTTaGTACATCTCGGGCCAAAACAGTACTATTCCCCCTGACCTGACC +
Preference number: 6 (lower is better)
Translates to: QFQDMYLNFSISKGI*YISGQNSTIPPDLT
Trigger: GGTCAGGTCAGGGGGAATAGTACTGTTTTGGCCCGAGATGTACAAAATCCCTTTCGATATGGAGAAATTAAGATACATGTCCTGAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 72 bp AAGAATCCTAATTTTGCTAGACAGTTCTTCTCTTGCTaGCTCGTTGTCCTGGGCAATGCTCCACTCAAACAT +
Preference number: 6 (lower is better)
Translates to: KNPNFARQFFSC*LVVLGNAPLKH
Trigger: ATGTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTGTCTAGCAAAATTAGGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 72 bp GCTGTTTTGTCATCCAGTATAGCCACTTTCTCAGAATaGGACCCGTTAAGTGCAACTCTATGGTCTTGCAAT +
Preference number: 6 (lower is better)
Translates to: AVLSSSIATFSE*DPLSATLWSCN
Trigger: ATTGCAAGACCATAGAGTTGCACTTAACGGGTCTCATTCTGAGAAAGTGGCTATACTGGATGACAAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 72 bp ACTCCTTGTTTATCCATGTTCAGATCCAAGGATAAATaGGAGCAGTCTGTGAATGCCATGGCTTCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: TPCLSMFRSKDK*EQSVNAMASLV
Trigger: GACCAAAGAAGCCATGGCATTCACAGACTGCTCTCATTTATCCTTGGATCTGAACATGGATAAACAAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS TCA 72 bp TCTGAATGGAGGAAACACTTCAATGTGCCGAGGAGTTaGTGTGTATTTTCTTCCCATCTTGTCCTTGGCAAT +
Preference number: 6 (lower is better)
Translates to: SEWRKHFNVPRS*CVFSSHLVLGN
Trigger: ATTGCCAAGGACAAGATGGGAAGAAAATACACATCAACTCCTCGGCACATTGAAGTGTTTCCTCCATTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp CATCATCTACCAGGAGCAGTTCCACATCTACAGATCTaGGCAAGTTGGAAATTTCTTTTGGGCTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: HHLPGAVPHLQI*ASWKFLLGFSS
Trigger: AGAAGAAAAGCCCAAAAGAAATTTCCAACTTGCCCAGATCTGTAGATGTGGAACTGCTCCTGGTAGATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp CTGCAGTTTGAGTTCCATGTTTCTGAAGTATTTATTTaGGAATGGGCGTTTGGAAGAGCCAAGAACCCTCAC +
Preference number: 6 (lower is better)
Translates to: LQFEFHVSEVFI*EWAFGRAKNPH
Trigger: GTGAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAAATAAATACTTCAGAAACATGGAACTCAAACTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp ACTCCTACTCCAGTGACAATGTCTGTCTGTAGAATATaGTTGGCAGAAATCATCCATATCCCAGGTTCACCA +
Preference number: 6 (lower is better)
Translates to: TPTPVTMSVCRI*LAEIIHIPGSP
Trigger: TGGTGAACCTGGGATATGGATGATTTCTGCCAACAATATTCTACAGACAGACATTGTCACTGGAGTAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 90 bp AGCCACTTTCTCAGAATGAGACCCGTTAAGTGCAACTCTATGGTCTaGCAATTCCAGTATATAATGTTCCAGGGGAAATTTCACCTCTGT +
Preference number: 6 (lower is better)
Translates to: SHFLRMRPVKCNSMV*QFQYIMFQGKFHLC
Trigger: ACAGAGGTGAAATTTCCCCTGGAACATTATATACTGGAATTGCAAGACCATAGAGTTGCACTTAACGGGTCTCATTCTGAGAAAGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 90 bp ATGGAGTTTGAGCTGAGAATTTATAGGCATCAGAATCTGCTCTGGTaGGCACTCTGGATAGAAGAGTTGGAGTTTTTCAAACACCAGGAT +
Preference number: 6 (lower is better)
Translates to: MEFELRIYRHQNLLW*ALWIEELEFFKHQD
Trigger: ATCCTGGTGTTTGAAAAACTCCAACTCTTCTATCCAGAGTGCCAACCAGAGCAGATTCTGATGCCTATAAATTCTCAGCTCAAACTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CCA 72 bp TTTGAGTTCCATGTTTCTGAAGTATTTATTTTGGAATaGGCGTTTGGAAGAGCCAAGAACCCTCACAGTCAC +
Preference number: 6 (lower is better)
Translates to: FEFHVSEVFILE*AFGRAKNPHSH
Trigger: GTGACTGTGAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAAATAAATACTTCAGAAACATGGAACTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp ATTTATAGGCATCAGAATCTGCTCTGGTTGGCACTCTaGATAGAAGAGTTGGAGTTTTTCAAACACCAGGAT +
Preference number: 6 (lower is better)
Translates to: IYRHQNLLWLAL*IEELEFFKHQD
Trigger: ATCCTGGTGTTTGAAAAACTCCAACTCTTCTATCCAGAGTGCCAACCAGAGCAGATTCTGATGCCTATAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271854.3
ENST00000368553.5
ENST00000368559.7
CDS CAA 72 bp GAAGAGCCAAGAACCCTCACAGTCACTAACACAGTTTaGTCTATTTCAACCTTATCAATCAGATCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: EEPRTLTVTNTV*SISTLSIRSSS
Trigger: GGAGCTTGATCTGATTGATAAGGTTGAAATAGACAAAACTGTGTTAGTGACTGTGAGGGTTCTTGGCTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp TCCATGTTTCTGAAGTATTTATTTTGGAATGGGCGTTaGGAAGAGCCAAGAACCCTCACAGTCACTAACACA +
Preference number: 6 (lower is better)
Translates to: SMFLKYLFWNGR*EEPRTLTVTNT
Trigger: TGTGTTAGTGACTGTGAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAAATAAATACTTCAGAAACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp AATATAAAAGGCTGGGATGAAAGGAATGAGGATTCGTaGCATTCCATTCTTGCTACGTTCACTGACCAGTGT +
Preference number: 6 (lower is better)
Translates to: NIKGWDERNEDS*HSILATFTDQC
Trigger: ACACTGGTCAGTGAACGTAGCAAGAATGGAATGCAACGAATCCTCATTCCTTTCATCCCAGCCTTTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368559.7
CDS CAA 90 bp AGTTTGAGTTCCATGTTTCTGAAGTATTTATTTTGGAATGGGCGTTaGGAAGAGCCAAGAACCCTCACAGTCACTAACACAGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: SLSSMFLKYLFWNGR*EEPRTLTVTNTVLS
Trigger: AGACAAAACTGTGTTAGTGACTGTGAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAAATAAATACTTCAGAAACATGGAACTCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 72 bp CAGTATAGCCACTTTCTCAGAATGAGACCCGTTAAGTaGAACTCTATGGTCTTGCAATTCCAGTATATAATG +
Preference number: 6 (lower is better)
Translates to: QYSHFLRMRPVK*NSMVLQFQYIM
Trigger: CATTATATACTGGAATTGCAAGACCATAGAGTTGCACTTAACGGGTCTCATTCTGAGAAAGTGGCTATACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp AGATTTAGCTGCGATATGTGTACTGGAACAATGCATTaGTCCAGGTCTTTGAATACCTTCTTTGAGAAGAGT +
Preference number: 6 (lower is better)
Translates to: RFSCDMCTGTMH*SRSLNTFFEKS
Trigger: ACTCTTCTCAAAGAAGGTATTCAAAGACCTGGACCAATGCATTGTTCCAGTACACATATCGCAGCTAAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp TTGTCACATTCATTCACACTTACTGTTACCAGAGTATaGCCAAGAGATTTAGCTGCGATATGTGTACTGGAA +
Preference number: 6 (lower is better)
Translates to: LSHSFTLTVTRV*PRDLAAICVLE
Trigger: TTCCAGTACACATATCGCAGCTAAATCTCTTGGCCATACTCTGGTAACAGTAAGTGTGAATGAATGTGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp GACATGTATCTTAATTTCTCCATATCGAAAGGGATTTaGTACATCTCGGGCCAAAACAGTACTATTCCCCCT +
Preference number: 6 (lower is better)
Translates to: DMYLNFSISKGI*YISGQNSTIPP
Trigger: AGGGGGAATAGTACTGTTTTGGCCCGAGATGTACAAAATCCCTTTCGATATGGAGAAATTAAGATACATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CAA 72 bp CTAAAAATCCAGGCTCTACAACATATATGGTGCAATTaGGGAGTCCAGACACAGATCGCATATGAACATTTT +
Preference number: 6 (lower is better)
Translates to: LKIQALQHIWCN*GVQTQIAYEHF
Trigger: AAAATGTTCATATGCGATCTGTGTCTGGACTCCCAAATTGCACCATATATGTTGTAGAGCCTGGATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 72 bp AATATCTTTATTCTGGTAAATGATGGAGGTCAGGGATaGATTTATTACCACAACACCATCTTTCAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: NIFILVNDGGQG*IYYHNTIFQGF
Trigger: AAAGCCCTGAAAGATGGTGTTGTGGTAATAAATGCATCCCTGACCTCCATCATTTACCAGAATAAAGATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS GCA 72 bp TTCCATCTCAGCTATATATATTGGGGGAGCATATTCTaGTTCGGAGTATTTAAGAATCCTAATTTTGCTAGA +
Preference number: 6 (lower is better)
Translates to: FHLSYIYWGSIF*FGVFKNPNFAR
Trigger: TCTAGCAAAATTAGGATTCTTAAATACTCCGAAGCAGAATATGCTCCCCCAATATATATAGCTGAGATGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7
CDS CCA 72 bp TTGTTTCTCCTCTTTTTCCATCTCAGCTATATATATTaGGGGAGCATATTCTGCTTCGGAGTATTTAAGAAT +
Preference number: 6 (lower is better)
Translates to: LFLLFFHLSYIY*GSIFCFGVFKN
Trigger: ATTCTTAAATACTCCGAAGCAGAATATGCTCCCCCAATATATATAGCTGAGATGGAAAAAGAGGAGAAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271854.3
ENST00000368559.7