RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUP160 (Homo sapiens)

Ensembl gene IDs: ENSG00000030066

Ensembl transcript IDs: ENST00000378460.6, ENST00000526569.1, ENST00000526870.1, ENST00000527126.1, ENST00000528071.5, ENST00000528501.5, ENST00000529863.1, ENST00000530326.5, ENST00000532773.1

Found 543 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATCTCTCTGGGGTCTTGATCATCTCTGATGACAATCTCTTCCTCTaGCAGAGGCTGCATAAAAACTGGATTCCACTGACCTGCAACATT +
Preference number: 1 (lower is better)
Translates to: HLSGVLIISDDNLFL*QRLHKNWIPLTCNI
Trigger: AATGTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGAAGAGATTGTCATCAGAGATGATCAAGACCCCAGAGAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR GCA 90 bp AGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATaGAGACTTGAATGTTGTACACATCATTTACAGTTACAAAAATCG +
Preference number: 1 (lower is better)
Translates to: STGSSDSSALLSCAE*RLECCTHHLQLQKS
Trigger: CGATTTTTGTAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR GCA 90 bp TGTTCAAAGTTGATGTATTTCACTACTGTTTGGTTCTCAGCATCATaGCACAGGGCCCAGATATCCGTGGAAGTTAAGGCAAAGTCAATC +
Preference number: 1 (lower is better)
Translates to: CSKLMYFTTVWFSAS*HRAQISVEVKAKSI
Trigger: GATTGACTTTGCCTTAACTTCCACGGATATCTGGGCCCTGTGGCATGATGCTGAGAACCAAACAGTAGTGAAATACATCAACTTTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR GCA 90 bp ACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTaGTGTGTTACTACCATAGAGCTGGGTAAGATTCATTCGAATATT +
Preference number: 1 (lower is better)
Translates to: TSTGDFMHPSAHNIP*CVTTIELGKIHSNI
Trigger: AATATTCGAATGAATCTTACCCAGCTCTATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR TCA 90 bp GACTTGAATGTTGTACACATCATTTACAGTTACAAAAATCGGCCTTaGGTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCAC +
Preference number: 1 (lower is better)
Translates to: DLNVVHIIYSYKNRP*VQGSCRVVLSPKRH
Trigger: GTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTACTCAAGGCCGATTTTTGTAACTGTAAATGATGTGTACAACATTCAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR CCA 90 bp GCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTaGAAAGTGAAGGTGAGTCTTAATTTGCAGATAATGAATGTCTTC +
Preference number: 1 (lower is better)
Translates to: AFGGQLQQANNPQLF*KVKVSLNLQIMNVF
Trigger: GAAGACATTCATTATCTGCAAATTAAGACTCACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR CCA 90 bp ATCTCTGATGACAATCTCTTCCTCTGGCAGAGGCTGCATAAAAACTaGATTCCACTGACCTGCAACATTATGTTCAAAGTTGATGTATTT +
Preference number: 1 (lower is better)
Translates to: ISDDNLFLWQRLHKN*IPLTCNIMFKVDVF
Trigger: AAATACATCAACTTTGAACATAATGTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGAAGAGATTGTCATCAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR TCA 90 bp TTCTCGGCTCCAGAGTTATATATAACAGAAACAGCTGCATGTATCTaGCCCATCAGTATGATAGGAAAAACTCAAAGTGTGTGTCCTTTA +
Preference number: 1 (lower is better)
Translates to: FSAPELYITETAACI*PISMIGKTQSVCPL
Trigger: TAAAGGACACACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATATATAACTCTGGAGCCGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
3UTR TCA 90 bp CACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGACTTaGATTATCTCATTAATACCCAAACAATCCTATAAAGTAGATATT +
Preference number: 1 (lower is better)
Translates to: HSLWARHCYCSKQST*IISLIPKQSYKVDI
Trigger: AATATCTACTTTATAGGATTGTTTGGGTATTAATGAGATAATTCAAGTCGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
3UTR-3UTR CCA 90 bp ACCAGGCAACATGGCGAAACCCCGTCTCTGTCCTCGTTTTGGTGCATGCATGTACCAGGTAGAGTCCCATaGTGGGGGAATAAGCAAGCC +
Preference number: 2 (lower is better)
Translates to: TRQHGETPSLSSFWCMHVPGRVP*WGNKQA
Trigger: GGCTTGCTTATTCCCCCACCATGGGACTCTACCTGG...TACATGCATGCACCAAAACGAGGACAGAGACGGGGTTTCGCCATGTTGCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR TCA 90 bp GGCAAACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAATGTCAGTGAATATTaGCTGCATCTGACTGTCAAC +
Preference number: 2 (lower is better)
Translates to: GKQGLPITAEPGCRGGGINVSEY*LHLTVN
Trigger: GTTGACAGTCAGATGCAGTCAATATTCACTGACATT...AATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
3UTR-3UTR TCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTAAGCACAGGGTCCTCTaGCTCTTCCGCCCTCCTATC +
Preference number: 2 (lower is better)
Translates to: CFWWSATTSQQPSAILESKHRVL*LFRPPI
Trigger: GATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTT...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR-3UTR TCA 90 bp CTCTTCCTCTGGCAGAGGCTGCATAAAAACTGGATTCCACTGACCTGCAACATTAATGAACAGCAAGACTaGGGGGACGATCTGAAGGCG +
Preference number: 2 (lower is better)
Translates to: LFLWQRLHKNWIPLTCNINEQQD*GDDLKA
Trigger: CGCCTTCAGATCGTCCCCTCAGTCTTGCTGTTCATT...AATGTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR TCA 90 bp AAACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGAGTTGCAAGGATCTGTaGAATCAACTTTTCCAATGT +
Preference number: 2 (lower is better)
Translates to: KQGLPITAEPGCRGGGIRSCKDL*NQLFQC
Trigger: ACATTGGAAAAGTTGATTTCACAGATCCTTGCAACT...CCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526870.1
3UTR-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACTACAAAAATCGGCCTTaGGTACAGGGTTCCTGTAGG +
Preference number: 2 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHYKNRP*VQGSCR
Trigger: CCTACAGGAACCCTGTACTCAAGGCCGATTTTTGTA...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR-3UTR TCA 90 bp ACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGAGATATTCCAGGTACTGCCTTTTCCAATGTCAGTaGATATTGACTGCATCTGAC +
Preference number: 2 (lower is better)
Translates to: TAEPGCRGGGIRRYSRYCLFQCQ*ILTASD
Trigger: GTCAGATGCAGTCAATATTCACTGACATTGGAAAAG...GCAGTACCTGGAATATCTCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
3UTR-3UTR GCA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATATTCCAGAATCTGCTCTaGAGCCTTTTCCGGAGACTG +
Preference number: 2 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTIFQNLL*SLFRRL
Trigger: CAGTCTCCGGAAAAGGCTGCAGAGCAGATTCTGGAA...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR TCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCTACAAAAATCGGCCTTaGGTACAGGGTTCCTGTAGG +
Preference number: 2 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIYKNRP*VQGSCR
Trigger: CCTACAGGAACCCTGTACTCAAGGCCGATTTTTGTA...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR-3UTR CCA 90 bp ACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCTCTCTGTCCTCGTTTTaGTGCATGCATGTATATCCC +
Preference number: 2 (lower is better)
Translates to: TGDFMHPSAHNIPCCVTTSLSSF*CMHVYP
Trigger: GGGATATACATGCATGCACCAAAACGAGGACAGAGA...GGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR GCA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATAAGCGATTACTCTCAGTaGTCACCAACTGGAAAATGC +
Preference number: 2 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTISDYSQ*SPTGKC
Trigger: GCATTTTCCAGTTGGTGAGCACTGAGAGTAATCGCT...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR GCA 90 bp ACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCGGTGTAAAAAGACTTTaGAGATACATCTCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: TGDFMHPSAHNIPCCVTTGVKRL*RYISLG
Trigger: CCCCAGAGAGATGTATCTGCAAAGTCTTTTTACACC...GGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CCA 90 bp TCTCTGCAGATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACATTTCGAAACTCCTCCTaGGAGAATTCATACTCTGTT +
Preference number: 2 (lower is better)
Translates to: SLQIRKRVLAILCTPLHTFRNSS*ENSYSV
Trigger: AACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAA...TGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATCTGCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR CAA 90 bp CTGACCTGCAACATTATGTTCAAAGTTGATGTATTTCACTACTGTTaGGTTCTCAGCATCATGCCACAGGGCCCAGATATCCGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: LTCNIMFKVDVFHYC*VLSIMPQGPDIRGS
Trigger: ACTTCCACGGATATCTGGGCCCTGTGGCATGATGCTGAGAACCAAACAGTAGTGAAATACATCAACTTTGAACATAATGTTGCAGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR TCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCTGCAGAATGCAGACTTaGATGTTGTACACATCATTT +
Preference number: 2 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVCRMQT*MLYTSF
Trigger: AAATGATGTGTACAACATTCAAGTCTGCATTCTGCA...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR-3UTR GCA 90 bp TCTCTGCAGATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAAACAGGCATAGAACTTaGACCAGAATTCTTGTTGTA +
Preference number: 2 (lower is better)
Translates to: SLQIRKRVLAILCTPLHTNRHRT*TRILVV
Trigger: TACAACAAGAATTCTGGTGCAAGTTCTATGCCTGTT...TGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATCTGCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR TCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTGCAGAATGCAGACTTaGATGTTGTACACATCATTT +
Preference number: 2 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVCRMQT*MLYTSF
Trigger: AAATGATGTGTACAACATTCAAGTCTGCATTCTGCA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR-3UTR GCA 90 bp GATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTGGATTCCACTGACCTaGAACATTATGTTCAAAGTT +
Preference number: 2 (lower is better)
Translates to: DQETSTGDFMHPSAHNIPWIPLT*NIMFKV
Trigger: AACTTTGAACATAATGTTGCAGGTCAGTGGAATCCA...GGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CCA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTACTGAGCACAGTTTGTaGGCCAGGCACTGTTACTGT +
Preference number: 2 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCTEHSL*ARHCYC
Trigger: ACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGT...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
3UTR-3UTR CCA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATAAGTAGTCCAATTGCATaGATTGGGTTCCTAATCTCT +
Preference number: 2 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTISSPIA*IGFLIS
Trigger: AGAGATTAGGAACCCAATCCATGCAATTGGACTACT...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CCA 90 bp GATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCGTTCTGTCATTTACCTaGATTGAATCCCTTTTCCAT +
Preference number: 2 (lower is better)
Translates to: DQETSTGDFMHPSAHNIPVLSFT*IESLFH
Trigger: ATGGAAAAGGGATTCAATCCAGGTAAATGACAGAAC...GGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR GCA 90 bp ACTACCATAGAGCTGGGTAAGATTCATTCGAATATTCAAAGGCTGAGCTGTAAACTGTCCTCGTTTTGGTaGATGCATGTATATCCCCAG +
Preference number: 2 (lower is better)
Translates to: TTIELGKIHSNIQRLSCKLSSFW*MHVYPQ
Trigger: CTGGGGATATACATGCATGCACCAAAACGAGGACAG...TTTACAGCTCAGCCTTTGAATATTCGAATGAATCTTACCCAGCTCTATGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR GCA 90 bp AGAATTCTTGTTGTAAATTTCGAAACTCCTCCTGGGAGAATTCATACTCTGTTATGGTTCTCAGCATCATaGCACAGGGCCCAGATATCC +
Preference number: 2 (lower is better)
Translates to: RILVVNFETPPGRIHTLLWFSAS*HRAQIS
Trigger: GGATATCTGGGCCCTGTGGCATGATGCTGAGAACCA...TAACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAATTTACAACAAGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR CAA 90 bp AGTTCCGGGGCAGTAGAGATGCAATCCCTGCATTGGATGACGAGGTaGAACTGTTTCAATGTTAACATTCCTTGTTTAAAGTTAAATCCA +
Preference number: 2 (lower is better)
Translates to: SSGAVEMQSLHWMTR*NCFNVNIPCLKLNP
Trigger: TGGATTTAACTTTAAACAAGGAATGTTAACATTGAAACAGTTCAACCTCGTCATCCAATGCAGGGATTGCATCTCTACTGCCCCGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
3UTR-3UTR TCA 90 bp TTGTTGTTCTGTCATTTACCTGGATTGAATCCCTTTTCCATTTCCACTTCTGTTGACACAAAGCAAAGATaGAGGCATCATGCTCCACAC +
Preference number: 2 (lower is better)
Translates to: LLFCHLPGLNPFSISTSVDTKQR*RHHAPH
Trigger: GTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTC...AACAGAAGTGGAAATGGAAAAGGGATTCAATCCAGGTAAATGACAGAACAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR GCA 90 bp GCCTCCATCTCAGGGCAGACAATTAGGCAACCCATCTCTACTACAAGATTTAGATTAAAGTTAAATCCATaGTCAGTTCCCATTCTTACC +
Preference number: 2 (lower is better)
Translates to: ASISGQTIRQPISTTRFRLKLNP*SVPILT
Trigger: GGTAAGAATGGGAACTGAGCATGGATTTAACTTTAA...TCTAAATCTTGTAGTAGAGATGGGTTGCCTAATTGTCTGCCCTGAGATGGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526870.1
3UTR-3UTR TCA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTACCATAACATATTACTaGGTCCAAGGACAGGGATTT +
Preference number: 2 (lower is better)
Translates to: AELFLQRYCNYETKKEVLTITYY*VQGQGF
Trigger: AAATCCCTGTCCTTGGACTCAGTAATATGTTATGGT...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
3UTR-3UTR TCA 90 bp ATATCCACAGTTACTGACTCTTCAATCAGCCGGAGGCATTTTATAAGACATATGAAAACTGGATTCCACTaGCCTGCAACATTATGTTCA +
Preference number: 2 (lower is better)
Translates to: ISTVTDSSISRRHFIRHMKTGFH*PATLCS
Trigger: TGAACATAATGTTGCAGGTCAGTGGAATCCAGTTTT...CATATGTCTTATAAAATGCCTCCGGCTGATTGAAGAGTCAGTAACTGTGGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CCA 90 bp AGAATTCTTGTTGTAAATTTCGAAACTCCTCCTGGGAGAATTCATACTCTGTTAAGGCTGCATAAAAACTaGATTCCACTGACCTGCAAC +
Preference number: 2 (lower is better)
Translates to: RILVVNFETPPGRIHTLLRLHKN*IPLTCN
Trigger: GTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCT...TAACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAATTTACAACAAGAATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CCA 90 bp AGCTTCATTTGTGAATTGTCCTGGTGTAAAAAGACTTTGCAGATACATCTCTCTTCAGTGCTCACCAACTaGAAAATGCAGAAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: SFICELSWCKKTLQIHLSSVLTN*KMQKKN
Trigger: ATTTTTCTTCTGCATTTTCCAGTTGGTGAGCACTGA...AGAGAGATGTATCTGCAAAGTCTTTTTACACCAGGACAATTCACAAATGAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR CAA 90 bp AATGGAGTTGAATGCATCATTGTTTTAATCAAAGAGGCACATTTGTaGTTCTGTCATTTACCTGGATTGAATCCCTTTTCCATTTCCACT +
Preference number: 2 (lower is better)
Translates to: NGVECIIVLIKEAHL*FCHLPGLNPFSIST
Trigger: AGTGGAAATGGAAAAGGGATTCAATCCAGGTAAATGACAGAACAACAAATGTGCCTCTTTGATTAAAACAATGATGCATTCAACTCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CCA 90 bp AGAATTCTTGTTGTAAATTTCGAAACTCCTCCTGGGAGAATTCATACTCTGTTAATTTGTGAATTGTCCTaGTGTAAAAAGACTTTGCAG +
Preference number: 2 (lower is better)
Translates to: RILVVNFETPPGRIHTLLICELS*CKKTLQ
Trigger: CTGCAAAGTCTTTTTACACCAGGACAATTCACAAAT...TAACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAATTTACAACAAGAATTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR TCA 72 bp AATTGTGTTAGCACCACCAGCAAGCACAGGGTCCTCTaGCTCTTCCGCCCTCCTATCTTGTGCAGAATGCAG +
Preference number: 3 (lower is better)
Translates to: NCVSTTSKHRVL*LFRPPILCRMQ
Trigger: CTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGCTGGTGGTGCTAACACAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR CCA 72 bp GGTTCTCAGCATCATGCCACAGGGCCCAGATATCCGTaGAAGTTAAGGCAAAGTCAATCAGTGTCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: GSQHHATGPRYP*KLRQSQSVSPE
Trigger: CTCAGGAGACACTGATTGACTTTGCCTTAACTTCCACGGATATCTGGGCCCTGTGGCATGATGCTGAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR TCA 72 bp CACAAAGCAAAGATGAAGGCATCATGCTCCACACAATaGACAGCAAGACTGAGGGGACGATCTGAAGGCGAC +
Preference number: 3 (lower is better)
Translates to: HKAKMKASCSTQ*TARLRGRSEGD
Trigger: GTCGCCTTCAGATCGTCCCCTCAGTCTTGCTGTTCATTGTGTGGAGCATGATGCCTTCATCTTTGCTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR CCA 72 bp GGGGTCTTGATCATCTCTGATGACAATCTCTTCCTCTaGCAGAGGCTGCATAAAAACTGGATTCCACTGACC +
Preference number: 3 (lower is better)
Translates to: GVLIISDDNLFL*QRLHKNWIPLT
Trigger: GGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGAAGAGATTGTCATCAGAGATGATCAAGACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp CTGTCAAAAGGTTCTCATAAGGCAGGAGATACAAATGATCCACTAAGGATGAGGCTTGAACTCAGGAGTTaGAGACCAGGCAACATGGCG +
Preference number: 3 (lower is better)
Translates to: LSKGSHKAGDTNDPLRMRLELRS*RPGNMA
Trigger: CGCCATGTTGCCTGGTCTCAAACTCCTGAGTTCAAG...CCTCATCCTTAGTGGATCATTTGTATCTCCTGCCTTATGAGAACCTTTTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp GCTGCTGTAAGATCAAAAGATCTCTGCAGATCAGGAAACGAGTACTGGCGATTTGTGAGAGAGGGCTTCTaGATACTGAAGACAACAGGC +
Preference number: 3 (lower is better)
Translates to: AAVRSKDLCRSGNEYWRFVREGF*ILKTTG
Trigger: GCCTGTTGTCTTCAGTATCAAGAAGCCCTCTCTCAC...AAATCGCCAGTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCTTACAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR GCA 72 bp TCTCTGCAGATCAGGAAACGAGTACTGGCGATTTTATaGACCCCTCTGCACACAATATACCCTGCTGTGTTA +
Preference number: 3 (lower is better)
Translates to: SLQIRKRVLAIL*TPLHTIYPAVL
Trigger: TAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATCTGCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR GCA 72 bp TTGATGTATTTCACTACTGTTTGGTTCTCAGCATCATaGCACAGGGCCCAGATATCCGTGGAAGTTAAGGCA +
Preference number: 3 (lower is better)
Translates to: LMYFTTVWFSAS*HRAQISVEVKA
Trigger: TGCCTTAACTTCCACGGATATCTGGGCCCTGTGGCATGATGCTGAGAACCAAACAGTAGTGAAATACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR GCA 72 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTaGTGTGTTACTACCATAGAGCTGGGTAAGATTCAT +
Preference number: 3 (lower is better)
Translates to: GDFMHPSAHNIP*CVTTIELGKIH
Trigger: ATGAATCTTACCCAGCTCTATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp ATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTTGGTGTAAAAAGACTTaGCAGATACATCTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: IRKRVLAILCTPLHTIYPWCKKT*QIHLSG
Trigger: CCCAGAGAGATGTATCTGCAAAGTCTTTTTACACCA...AGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR GCA 72 bp CCCCAAATCACAGCATCTCCAAGCCTCATTAACAGCTaGTGTAAGATCAAAAGATCTCTGCAGATCAGGAAA +
Preference number: 3 (lower is better)
Translates to: PQITASPSLINS*CKIKRSLQIRK
Trigger: TTTCCTGATCTGCAGAGATCTTTTGATCTTACAGCAGCTGTTAATGAGGCTTGGAGATGCTGTGATTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp ACAGTGAAGAAATATGATCGAGACTATAGCGATTACTCTCAGTGCTCACCAACTGTCTCTGTCCTCGTTTaGGTGCATGCATGTATATCC +
Preference number: 3 (lower is better)
Translates to: TVKKYDRDYSDYSQCSPTVSVLV*VHACIS
Trigger: GGATATACATGCATGCACCAAAACGAGGACAGAGAC...AGTTGGTGAGCACTGAGAGTAATCGCTATAGTCTCGATCATATTTCTTCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp GCTGCTGTAAGATCAAAAGATCTCTGCAGATCAGGAAACGAGTACTGGCGATTTCTCTGTTACACTTCCTaGAAGCTCATTTTCAACAGC +
Preference number: 3 (lower is better)
Translates to: AAVRSKDLCRSGNEYWRFLCYTS*KLIFNS
Trigger: GCTGTTGAAAATGAGCTTCAAGGAAGTGTAACAGAG...AAATCGCCAGTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCTTACAGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATATGTCATTTACCTGGATaGAATCCCTTTTCCATTTCC +
Preference number: 3 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTICHLPG*NPFSIS
Trigger: GGAAATGGAAAAGGGATTCAATCCAGGTAAATGACA...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATAAAAGAGGCACATTTGTaGTTCTGTCATTTACCTGGA +
Preference number: 3 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTIKEAHL*FCHLPG
Trigger: TCCAGGTAAATGACAGAACAACAAATGTGCCTCTTT...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR GCA 72 bp TCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATaGAGACTTGAATGTTGTACACATCATTTACAGTTA +
Preference number: 3 (lower is better)
Translates to: SSDSSALLSCAE*RLECCTHHLQL
Trigger: TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR GCA 72 bp GCCTCATTAACAGCTGCTGTAAGATCAAAAGATCTCTaGAGATCAGGAAACGAGTACTGGCGATTTTATGCA +
Preference number: 3 (lower is better)
Translates to: ASLTAAVRSKDL*RSGNEYWRFYA
Trigger: TGCATAAAATCGCCAGTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCTTACAGCAGCTGTTAATGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR CCA 72 bp GACAATCTCTTCCTCTGGCAGAGGCTGCATAAAAACTaGATTCCACTGACCTGCAACATTATGTTCAAAGTT +
Preference number: 3 (lower is better)
Translates to: DNLFLWQRLHKN*IPLTCNIMFKV
Trigger: AACTTTGAACATAATGTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGAAGAGATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGTGCAGAATGCAGACTaGAATGTTGTACACATCATT +
Preference number: 3 (lower is better)
Translates to: CFWWSATTSQQPSAILESVQNAD*NVVHII
Trigger: AATGATGTGTACAACATTCAAGTCTGCATTCTGCAC...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR-3UTR CAA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATAAGCTTCATTTGTGAATaGTCCTGGTGTAAAAAGACT +
Preference number: 3 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTISFICE*SWCKKT
Trigger: AGTCTTTTTACACCAGGACAATTCACAAATGAAGCT...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR TCA 72 bp GTTGTACACATCATTTACAGTTACAAAAATCGGCCTTaGGTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCT +
Preference number: 3 (lower is better)
Translates to: VVHIIYSYKNRP*VQGSCRVVLSP
Trigger: AGGACTTAAGACTACCCTACAGGAACCCTGTACTCAAGGCCGATTTTTGTAACTGTAAATGATGTGTACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR TCA 72 bp ACATTCGTAGTTTATGATCCTGACACAAAGCAAAGATaGAGGCATCATGCTCCACACAATGAACAGCAAGAC +
Preference number: 3 (lower is better)
Translates to: TFVVYDPDTKQR*RHHAPHNEQQD
Trigger: GTCTTGCTGTTCATTGTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTCAGGATCATAAACTACGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR TCA 72 bp TCCTCTGGCAGAGGCTGCATAAAAACTGGATTCCACTaGCCTGCAACATTATGTTCAAAGTTGATGTATTTC +
Preference number: 3 (lower is better)
Translates to: SSGRGCIKTGFH*PATLCSKLMYF
Trigger: GAAATACATCAACTTTGAACATAATGTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
3UTR-3UTR CAA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTTATTTGAGACCAAGGTaGAACACCAGAAATTGTGTT +
Preference number: 3 (lower is better)
Translates to: CFWWSATTSQQPSAILESYLRPR*NTRNCV
Trigger: AACACAATTTCTGGTGTTCAACCTTGGTCTCAAATA...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR TCA 72 bp CTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTaGATGTTGTACACATCATTTACAGTTACAAAAATC +
Preference number: 3 (lower is better)
Translates to: LFRPPILCRMQT*MLYTSFTVTKI
Trigger: GATTTTTGTAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
3UTR-3UTR CAA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGTACAAAAGCAGCTATTaGAGACCAAGGTTGAACACC +
Preference number: 3 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLYKSSY*RPRLNT
Trigger: GGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTA...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378460.6
3UTR TCA 72 bp TGGGCCAGGCACTGTTACTGTTCTAAGCAATCGACTTaGATTATCTCATTAATACCCAAACAATCCTATAAA +
Preference number: 3 (lower is better)
Translates to: WARHCYCSKQST*IISLIPKQSYK
Trigger: TTTATAGGATTGTTTGGGTATTAATGAGATAATTCAAGTCGATTGCTTAGAACAGTAACAGTGCCTGGCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
3UTR TCA 72 bp CCAGAGTTATATATAACAGAAACAGCTGCATGTATCTaGCCCATCAGTATGATAGGAAAAACTCAAAGTGTG +
Preference number: 3 (lower is better)
Translates to: PELYITETAACI*PISMIGKTQSV
Trigger: CACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATATATAACTCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp AACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGATGGGGCGGGCGGAGCTaGGGACAGGTGAAGCATTCC +
Preference number: 4 (lower is better)
Translates to: NRASPSLLSQAVEAVELGWGGRS*GQVKHS
Trigger: GGAATGCTTCACCTGTCCGCAGCTCCGCCCGCCCCA...TCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR CCA 90 bp ACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGAGATATTCCAGGTACTGCCGTCACTTCCGGGGGTaGGGCGGGCGGAGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: TAEPGCRGGGIRRYSRYCRHFRG*GGRSCG
Trigger: TCCGCAGCTCCGCCCGCCCCACCCCCGGAAGTGACG...GCAGTACCTGGAATATCTCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp GGCAAACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTGGAGCTGCGGACAGGTaGAGCATTCCGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GKQGLPITAEPGCRGGGIGAADR*SIPGAE
Trigger: TTCTGCTCCCGGAATGCTTCACCTGTCCGCAGCTCC...AATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR CCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGCGTCACTTCCGGGGGTaGGGCGGGCGGAGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVRHFRG*GGRSCG
Trigger: TCCGCAGCTCCGCCCGCCCCACCCCCGGAAGTGACG...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp GGCAAACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTCAATGCTGCAGACTGTaGATTCCCGAAAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GKQGLPITAEPGCRGGGIQCCRL*IPESAS
Trigger: CGAGGCACTTTCGGGAATTCACAGTCTGCAGCATTG...AATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp CTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGAGATATTCCAGGTACTGCTCTTCCACCGGGAGAATaGGGGTGGGCAGCGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLSQAVEAVELGDIPGTALPPGE*GWAARN
Trigger: ATTCCTCGCTGCCCACCCTCATTCTCCCGGTGGAAG...AGCAGTACCTGGAATATCTCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR GCA 90 bp TTAAGAACAAAGATTCCCCCAGAAGCACATGGTAAGGCAAACAGGGCCTCCCCAGCTCCGGCCCTTCGTTaGGAGGCTTCCACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LRTKIPPEAHGKANRASPAPALR*EASTGR
Trigger: TCTCCCGGTGGAAGCCTCGCAACGAAGGGCCGGAGC...TGGGGAGGCCCTGTTTGCCTTACCATGTGCTTCTGGGGGAATCTTTGTTCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAGCTGATGGATCATGCTaGGCCAAAGTGAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRADGSC*AKVRRM
Trigger: CATCCGCCTCACTTTGGCTCAGCATGATCCATCAGC...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTGGGGCGGGCGGAGCTaGGGACAGGTGAAGCATTCC +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVWGGRS*GQVKHS
Trigger: GGAATGCTTCACCTGTCCGCAGCTCCGCCCGCCCCA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR GCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACACCAGGCCCAGGCTTCTaGTTGTGCTGCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTPGPGF*LCCLSS
Trigger: GGAGGAGAGGCAGCACAAGCAGAAGCCTGGGCCTGG...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGAGATATTCCAGGTACTGCTGAGGCAGACTCTATCTaGGGGAACCTTCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLSQAVEAVELGDIPGTAEADSI*GNLPVA
Trigger: GGCCACTGGAAGGTTCCCGCAGATAGAGTCTGCCTC...AGCAGTACCTGGAATATCTCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGGAGCTGCGGACAGGTaGAGCATTCCGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTGAADR*SIPGAE
Trigger: TTCTGCTCCCGGAATGCTTCACCTGTCCGCAGCTCC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAACTGAGGGGACGATCTaGAGGCGACTGGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTTEGTI*RRLVTP
Trigger: AGGGGTGACCAGTCGCCTTCAGATCGTCCCCTCAGT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAGATCTCCCCATCCTCTaGGCGAATCAAGCGATCCAA +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRDLPIL*ANQAIQ
Trigger: TTGGATCGCTTGATTCGCTCAGAGGATGGGGAGATC...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACACATGCTGAGCCAAAGTaGGGCGGATGCGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTHAEPK*GGCEPR
Trigger: CCTTGGCTCGCATCCGCCTCACTTTGGCTCAGCATG...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAAGCAACTGCAACCGCTaGTGGATCATGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRSNCNR*WIMLSQ
Trigger: TTGGCTCAGCATGATCCATCAGCGGTTGCAGTTGCT...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGAGATATTCCAGGTACTGCTGTGAATTCCCGAAAGTaGCTCGGCCTTTCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LLSQAVEAVELGDIPGTAVNSRK*LGLSRS
Trigger: TGAGCGCGAAAGGCCGAGGCACTTTCGGGAATTCAC...AGCAGTACCTGGAATATCTCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGATCATGCTCCACACAATaGACAGCAAGACTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRSCSTQ*TARLRG
Trigger: TCCCCTCAGTCTTGCTGTTCATTGTGTGGAGCATGA...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGCATGCTGAGCCAAAGTaGGGCGGATGCGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVHAEPK*GGCEPR
Trigger: CCTTGGCTCGCATCCGCCTCACTTTGGCTCAGCATG...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGATTGTGGGGGCAGCTGTaGATTCTCCATCATGATTCC +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRLWGQL*ILHHDS
Trigger: GGAATCATGATGGAGAATGCACAGCTGCCCCCACAA...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAACTTCAGATGCTGCCTaGCAAAAACATTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRTSDAA*QKHSRA
Trigger: GGCTCTGGAATGTTTTTGTCAGGCAGCATCTGAAGT...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AAACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGTCAAAGTATGCTTGGTaGGGGATAACGAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: KQGLPITAEPGCRGGGIRSKYAW*GITRIQ
Trigger: TTGGATTCTCGTTATCCCTCACCAAGCATACTTTGA...CCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR GCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACGCCAGCCACGGCATTTaGAGTCCCAATGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHASHGI*SPNAAD
Trigger: GTCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGC...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTCCAGGCCCAGGCTTCTaGTTGTGCTGCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESPGPGF*LCCLSS
Trigger: GGAGGAGAGGCAGCACAAGCAGAAGCCTGGGCCTGG...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AAACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGGTAGCTATCAAAGTATaGTTGGTGAGGGATAACGAG +
Preference number: 4 (lower is better)
Translates to: KQGLPITAEPGCRGGGIRVAIKV*LVRDNE
Trigger: CTCGTTATCCCTCACCAAGCATACTTTGATAGCTAC...CCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR CCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGATCAGGAAACGAGTACTaGCGATTTTATGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRSGNEY*RFYAPL
Trigger: GAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGA...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTGGAAGCCACACCATTaGGGCTGTTGCGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVWKPHH*GCCGQW
Trigger: CCACTGTCCGCAACAGCCCCAATGGTGTGGCTTCCA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp GCTGCTGTAAGATCAAAAGATCTCTGCAGATCAGGAAACGAGTACTGGCGATTTACTGAGGGGACGATCTaGAGGCGACTGGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: AAVRSKDLCRSGNEYWRFTEGTI*RRLVTP
Trigger: AGGGGTGACCAGTCGCCTTCAGATCGTCCCCTCAGT...AAATCGCCAGTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCTTACAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAAATGAACAGCAAGACTaGGGGGACGATCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTNEQQD*GDDLKA
Trigger: CGCCTTCAGATCGTCCCCTCAGTCTTGCTGTTCATT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATGACAGATGAGAGCTaGTTGGCTGCTAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHMTDES*LAASQA
Trigger: GGCCTGGCTAGCAGCCAATCAGCTCTCATCTGTCAT...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCCAGCCACGGCATTTaGAGTCCCAATGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSASHGI*SPNAAD
Trigger: GTCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGC...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GCCTCCATCTCAGGGCAGACAATTAGGCAACCCATCTCTACTACAAGATTTAGAGCCAGCCACGGCATTTaGAGTCCCAATGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: ASISGQTIRQPISTTRFRASHGI*SPNAAD
Trigger: GTCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGC...TCTAAATCTTGTAGTAGAGATGGGTTGCCTAATTGTCTGCCCTGAGATGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR CCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACCCAGGTAGAGTCCCATaGTGGGGGAATAAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHPGRVP*WGNKQA
Trigger: GGCTTGCTTATTCCCCCACCATGGGACTCTACCTGG...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATGCTGCAGACTGTaGATTCCCGAAAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKQCCRL*IPESAS
Trigger: CGAGGCACTTTCGGGAATTCACAGTCTGCAGCATTG...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp CTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGAGATATTCCAGGTACTGCTCCAGAGGTCTTCCAATaGATGAACCTGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LLSQAVEAVELGDIPGTAPEVFQ*MNLFLV
Trigger: AACCAGAAACAGGTTCATTCATTGGAAGACCTCTGG...AGCAGTACCTGGAATATCTCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGAATGAACAGCAAGACTaGGGGGACGATCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKNEQQD*GDDLKA
Trigger: CGCCTTCAGATCGTCCCCTCAGTCTTGCTGTTCATT...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGGATCTCCCCATCCTCTaGGCGAATCAAGCGATCCAA +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVDLPIL*ANQAIQ
Trigger: TTGGATCGCTTGATTCGCTCAGAGGATGGGGAGATC...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTCAAAGAGGCCCGCCTaGACCAAGAGAGTGACCATT +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVSKRPA*TKRVTI
Trigger: AATGGTCACTCTCTTGGTTCAGGCGGGCCTCTTTGA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTAAGCACAGGGTCCTCTaGCTCTTCCGCCCTCCTATC +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIKHRVL*LFRPPI
Trigger: GATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTT...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGATTAAAAGATTTGCAGTaGCTGCTTTTGGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRLKDLQ*LLLVVS
Trigger: GCTGACCACCAAAAGCAGTCACTGCAAATCTTTTAA...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TCCAGCAGTAAGCCGAAGGTCTTTCTTCACAGGGACATACTCCAGCATGTCAGCCTGTCCTCGTTTTGGTaGATGCATGTATATCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSSKPKVFLHRDILQHVSLSSFW*MHVYPQ
Trigger: CTGGGGATATACATGCATGCACCAAAACGAGGACAG...GCTGACATGCTGGAGTATGTCCCTGTGAAGAAAGACCTTCGGCTTACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAGCACACAATATACCCTaGTGTGTTACTACCATAGAG +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRAHNIP*CVTTIE
Trigger: CTCTATGGTAGTAACACAGCAGGGTATATTGTGTGC...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCAGTTTGGCTCAGAGGTaGCTTTGGCTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVSLAQR*LWLREE
Trigger: CTCTTCTCTCAGCCAAAGGCACCTCTGAGCCAAACT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCTCACTGTGCCAGCCTTaGGGTAATTGTGGCGATAGA +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVSLCQP*GNCGDR
Trigger: TCTATCGCCACAATTACCGCAAGGCTGGCACAGTGA...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCGGTAGAGTCCCATGGTaGGGGAATAAGCAAGCCGTA +
Preference number: 4 (lower is better)
Translates to: DQETSTGDFMHPSAHNIPGRVPW*GNKQAV
Trigger: TACGGCTTGCTTATTCCCCCACCATGGGACTCTACC...GGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACCAGGTAGAGTCCCATaGTGGGGGAATAAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTPGRVP*WGNKQA
Trigger: GGCTTGCTTATTCCCCCACCATGGGACTCTACCTGG...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGATCCAATTGCATGGATTaGGTTCCTAATCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRSNCMD*VPNLLQ
Trigger: CTGCAAGAGATTAGGAACCCAATCCATGCAATTGGA...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGGCTCAGAGGTGCCTTTaGCTGAGAGAAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVAQRCL*LREEVR
Trigger: TCTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGC...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCACTGCACCAGACACTaGCTGCACAATCCACGCATA +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKHCTRH*LHNPRI
Trigger: TATGCGTGGATTGTGCAGCCAGTGTCTGGTGCAGTG...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCTTTCAGTTCCACGACTaGCACCATACCAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVFQFHD*HHTRYV
Trigger: GACATACCTGGTATGGTGTCAGTCGTGGAACTGAAA...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCACTGAGGGGACGATCTaGAGGCGACTGGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFTEGTI*RRLVTP
Trigger: AGGGGTGACCAGTCGCCTTCAGATCGTCCCCTCAGT...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp ATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTAATGAACAGCAAGACTaGGGGGACGATCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: IRKRVLAILCTPLHTIYPNEQQD*GDDLKA
Trigger: CGCCTTCAGATCGTCCCCTCAGTCTTGCTGTTCATT...AGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTCATGCTCCACACAATaGACAGCAAGACTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVSCSTQ*TARLRG
Trigger: TCCCCTCAGTCTTGCTGTTCATTGTGTGGAGCATGA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGTCATGCTCCACACAATaGACAGCAAGACTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSSCSTQ*TARLRG
Trigger: TCCCCTCAGTCTTGCTGTTCATTGTGTGGAGCATGA...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGACACAAAGCAAAGATaGAGGCATCATGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTDTKQR*RHHAPH
Trigger: GTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGACAGGAACCAACATTaGCTTGACACCAGGGATGTA +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTDRNQH*LDTRDV
Trigger: TACATCCCTGGTGTCAAGTCAATGTTGGTTCCTGTC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGTCCTTAGAGTAGCCTaGCTTTTCCAGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTVLRVA*LFQSSP
Trigger: AGGTGATGACTGGAAAAGTCAGGCTACTCTAAGGAC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTGCTGATGGATCATGCTaGGCCAAAGTGAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIADGSC*AKVRRM
Trigger: CATCCGCCTCACTTTGGCTCAGCATGATCCATCAGC...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACCCTGAACCAAGAGAGTaGCCATTTCCTCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHPEPRE*PFPLLM
Trigger: CATCAGCAGAGGAAATGGTCACTCTCTTGGTTCAGG...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTATGACAGATGAGAGCTaGTTGGCTGCTAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESMTDES*LAASQA
Trigger: GGCCTGGCTAGCAGCCAATCAGCTCTCATCTGTCAT...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACGGCAGAGGCACTCCATaGGACAAGAGCTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHGRGTP*DKSLLI
Trigger: AATCAACAAGCTCTTGTCTCATGGAGTGCCTCTGCC...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACCTGTAAGCAATCGTTaGATTACTGAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRPVSNR*ITELCF
Trigger: GAAACAGAGTTCAGTAATGCAACGATTGCTTACAGG...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACATGGTTCTCAGCATCATaGCACAGGGCCCAGATATCC +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTWFSAS*HRAQIS
Trigger: GGATATCTGGGCCCTGTGGCATGATGCTGAGAACCA...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCATGGTTCTCAGCATCATaGCACAGGGCCCAGATATCC +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSWFSAS*HRAQIS
Trigger: GGATATCTGGGCCCTGTGGCATGATGCTGAGAACCA...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTTCCAGAATCTGCTCTaGAGCCTTTTCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVFQNLL*SLFRRL
Trigger: CAGTCTCCGGAAAAGGCTGCAGAGCAGATTCTGGAA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCAAGTGGAACATCAGTTaGCAAGCACTCACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVKWNIS*QALTSP
Trigger: TGGGGAAGTGAGTGCTTGGCAACTGATGTTCCACTT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGAGTTTGGCTCAGAGGTaGCTTTGGCTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKSLAQR*LWLREE
Trigger: CTCTTCTCTCAGCCAAAGGCACCTCTGAGCCAAACT...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCGAGTTCGAACTTCTCTaGCAAGCCGCATTCCATACT +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVEFELL*QAAFHT
Trigger: AGTATGGAATGCGGCTTGGCAGAGAAGTTCGAACTC...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTAGGGCGATCATACACTaGACCAGACACTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIRAIIH*TRHWLH
Trigger: GTGCAGCCAGTGTCTGGTGCAGTGTATGATCGCCCT...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGATTCCTCTTAGGGGATaGTCCAGGGCGATCATACAC +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVIPLRG*SRAIIH
Trigger: GTGTATGATCGCCCTGGAGCATCCCCTAAGAGGAAT...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp TTCCTCTGGCAGAGGCTGCATAAAAACTGGATTCCACTGACCTGCAACATTATGCGATCTGAAGGCGACTaGTCACCCCTGATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLWQRLHKNWIPLTCNIMRSEGD*SPLIAV
Trigger: AACAGCTATCAGGGGTGACCAGTCGCCTTCAGATCG...CATAATGTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGGTAGAGTCCCATGGTaGGGGAATAAGCAAGCCGTA +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIGRVPW*GNKQAV
Trigger: TACGGCTTGCTTATTCCCCCACCATGGGACTCTACC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGATTTCGAAACTCCTCCTaGGAGAATTCATACTCTGTT +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRFRNSS*ENSYSV
Trigger: AACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAA...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACCACATCATCAGATATaGTTGTCTCATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRPHHQI*LSHLLS
Trigger: TGACAGAAGATGAGACAACCATATCTGATGATGTGG...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCACACTGCACCAGACACTaGCTGCACAATCCACGCATA +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSHCTRH*LHNPRI
Trigger: TATGCGTGGATTGTGCAGCCAGTGTCTGGTGCAGTG...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCCAATTTGTCGATTTGTaGGGGCAGCTGTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVQFVDL*GQLCIL
Trigger: GAGAATGCACAGCTGCCCCCACAAATCGACAAATTG...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTCTGACAGAGTGATATaGCAGTGTCAAAGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVSDRVI*QCQRGP
Trigger: CGGGCCTCTTTGACACTGCCATATCACTCTGTCAGA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGGCTGTTGCGGACAGTaGAAACTCAATTCCGAAGTA +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTGCCGQ*KLNSEV
Trigger: TACTTCGGAATTGAGTTTCCACTGTCCGCAACAGCC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAAGTTGCAAGGATCTGTaGAATCAACTTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRSCKDL*NQLFQC
Trigger: ACATTGGAAAAGTTGATTTCACAGATCCTTGCAACT...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTTTCAGTTCCACGACTaGCACCATACCAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVFQFHD*HHTRYV
Trigger: GACATACCTGGTATGGTGTCAGTCGTGGAACTGAAA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGTTTCAGTTCCACGACTaGCACCATACCAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKFQFHD*HHTRYV
Trigger: GACATACCTGGTATGGTGTCAGTCGTGGAACTGAAA...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAAAGGCTGAGCTGGATTaGATCCCTTTTCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTKAELD*IPFPFP
Trigger: TGGAAATGGAAAAGGGATTCAATCCAGCTCAGCCTT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGGAACCAACATTGACTTaGCACCAGGGATGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSEPTLT*HQGCSS
Trigger: ACTGCTACATCCCTGGTGTCAAGTCAATGTTGGTTC...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGCTGATGTAGCCAACTaGATAACCAGTTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTADVAN*ITSSGK
Trigger: TTTGCCTGAACTGGTTATTCAGTTGGCTACATCAGC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTCAAAGAGGCCCGCCTaGACCAAGAGAGTGACCATT +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIISKRPA*TKRVTI
Trigger: AATGGTCACTCTCTTGGTTCAGGCGGGCCTCTTTGA...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACAGGCAGAGGCACTCCATaGGACAAGAGCTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTGRGTP*DKSLLI
Trigger: AATCAACAAGCTCTTGTCTCATGGAGTGCCTCTGCC...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCAGAGCTTGGAGAAGCTaGTCAATAGAGGAGTATGGA +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVRAWRS*SIEEYG
Trigger: TCCATACTCCTCTATTGATCAGCTTCTCCAAGCTCT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR GCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGCTGTCCTCGTTTTGGTaGATGCATGTATATCCCCAG +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSLSSFW*MHVYPQ
Trigger: CTGGGGATATACATGCATGCACCAAAACGAGGACAG...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGCTGTCCTCGTTTTGGTaGATGCATGTATATCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVLSSFW*MHVYPQ
Trigger: CTGGGGATATACATGCATGCACCAAAACGAGGACAG...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTCCTCTGGCAGAGGCTaGATAAAAACTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: DQETSTGDFMHPSAHNIPSSGRG*IKTGFH
Trigger: GTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGA...GGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTCCTCTGGCAGAGGCTaGATAAAAACTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVSSGRG*IKTGFH
Trigger: GTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCGTACTGGCGATTTTATaGACCCCTCTGCACACAATA +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVVLAIL*TPLHTI
Trigger: TATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTAC...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGAAGTGGAACATCAGTTaGCAAGCACTCACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKKWNIS*QALTSP
Trigger: TGGGGAAGTGAGTGCTTGGCAACTGATGTTCCACTT...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACATCACTGTGCCAGCCTTaGGGTAATTGTGGCGATAGA +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTSLCQP*GNCGDR
Trigger: TCTATCGCCACAATTACCGCAAGGCTGGCACAGTGA...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGGAGTTCGAACTTCTCTaGCAAGCCGCATTCCATACT +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSEFELL*QAAFHT
Trigger: AGTATGGAATGCGGCTTGGCAGAGAAGTTCGAACTC...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACCAGCCAGATAACAGTTaGCTTGTTTCTCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHQPDNS*LVSQVP
Trigger: GGGGACTTGAGAAACAAGGCAACTGTTATCTGGCTG...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCACCAGACACTGGCTaGACAATCCACGCATATTCT +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSAPDTG*TIHAYS
Trigger: AGAATATGCGTGGATTGTGCAGCCAGTGTCTGGTGC...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGCACCAGACACTGGCTaGACAATCCACGCATATTCT +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIAPDTG*TIHAYS
Trigger: AGAATATGCGTGGATTGTGCAGCCAGTGTCTGGTGC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAATTCCTCTTAGGGGATaGTCCAGGGCGATCATACAC +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSIPLRG*SRAIIH
Trigger: GTGTATGATCGCCCTGGAGCATCCCCTAAGAGGAAT...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCATTGTGGGGGCAGCTGTaGATTCTCCATCATGATTCC +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSLWGQL*ILHHDS
Trigger: GGAATCATGATGGAGAATGCACAGCTGCCCCCACAA...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGAACTGTCCTCGTTTTaGTGCATGCATGTATATCCC +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTELSSF*CMHVYP
Trigger: GGGATATACATGCATGCACCAAAACGAGGACAGTTC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGGGGCCCAGATATCCGTaGAAGTTAAGGCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSGPRYP*KLRQSQ
Trigger: TTGACTTTGCCTTAACTTCCACGGATATCTGGGCCC...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGTCAGGAAACGAGTACTaGCGATTTTATGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSSGNEY*RFYAPL
Trigger: GAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGA...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGCTCCAGTGTGTCAAGTaGAACATCAGTTGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVLQCVK*NISCQA
Trigger: TGCTTGGCAACTGATGTTCCACTTGACACACTGGAG...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAAATCTAATTGCCTGCTaGAATCAGGAATTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: ASTGSSDSSALLSCAECRNLIAC*NQEFGL
Trigger: TAACCCAAATTCCTGATTCCAGCAGGCAATTAGATT...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCTCTGACAGAGTGATATaGCAGTGTCAAAGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHISDRVI*QCQRGP
Trigger: CGGGCCTCTTTGACACTGCCATATCACTCTGTCAGA...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACTGCAGTGACTGCTTTTaGTGGTCAGCTACAACAAGC +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHCSDCF*WSATTS
Trigger: GCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCA...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACCCAGAGGTCTTCCAATaGATGAACCTGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHPEVFQ*MNLFLV
Trigger: AACCAGAAACAGGTTCATTCATTGGAAGACCTCTGG...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAACTGAGGGGACGATCTaGAGGCGACTGGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLTEGTI*RRLVTP
Trigger: AGGGGTGACCAGTCGCCTTCAGATCGTCCCCTCAGT...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGACACAAAGCAAAGATaGAGGCATCATGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSDTKQR*RHHAPH
Trigger: GTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTC...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGAACCAACATTGACTTaGCACCAGGGATGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIEPTLT*HQGCSS
Trigger: ACTGCTACATCCCTGGTGTCAAGTCAATGTTGGTTC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGACAGGAACCAACATTaGCTTGACACCAGGGATGTA +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIDRNQH*LDTRDV
Trigger: TACATCCCTGGTGTCAAGTCAATGTTGGTTCCTGTC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGGCTGATGTAGCCAACTaGATAACCAGTTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSADVAN*ITSSGK
Trigger: TTTGCCTGAACTGGTTATTCAGTTGGCTACATCAGC...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACATGCTTCAGTTATGGCTaGTGTAGCCAACTGAATAAC +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTCFSYG*CSQLNN
Trigger: GTTATTCAGTTGGCTACATCAGCCATAACTGAAGCA...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTCCTGAACCAAGAGAGTaGCCATTTCCTCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIPEPRE*PFPLLM
Trigger: CATCAGCAGAGGAAATGGTCACTCTCTTGGTTCAGG...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCAAAAGTCTGACAGAGTaGTATGGCAGTGTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVKSLTE*YGSVKE
Trigger: CTCTTTGACACTGCCATATCACTCTGTCAGACTTTT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACGGAAGCTTAAAAGTCTaGCAGAGTGATATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHGSLKV*QSDMAV
Trigger: CACTGCCATATCACTCTGTCAGACTTTTAAGCTTCC...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCATACAAAAATCGGCCTTaGGTACAGGGTTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSYKNRP*VQGSCR
Trigger: CCTACAGGAACCCTGTACTCAAGGCCGATTTTTGTA...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCTTAAAAGATTTGCAGTaGCTGCTTTTGGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVLKDLQ*LLLVVS
Trigger: GCTGACCACCAAAAGCAGTCACTGCAAATCTTTTAA...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp ACAGTGAAGAAATATGATCGAGACTATAGCGATTACTCTCAGTGCTCACCAACTGGTGGGTGGACTGCTTaGACTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TVKKYDRDYSDYSQCSPTGGWTA*TQEFET
Trigger: GGTCTCAAACTCCTGAGTTCAAGCAGTCCACCCACC...AGTTGGTGAGCACTGAGAGTAATCGCTATAGTCTCGATCATATTTCTTCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp TTAAGAACAAAGATTCCCCCAGAAGCACATGGTAAGGCAAACAGGGCCTCCCCATTACGGAGAACAACTTaGCACTCTCCACGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LRTKIPPEAHGKANRASPLRRTT*HSPRSK
Trigger: TTTACTACGTGGAGAGTGGCAAGTTGTTCTCCGTAA...TGGGGAGGCCCTGTTTGCCTTACCATGTGCTTCTGGGGGAATCTTTGTTCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR GCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACATTACGGAGAACAACTTaGCACTCTCCACGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTLRRTT*HSPRSK
Trigger: TTTACTACGTGGAGAGTGGCAAGTTGTTCTCCGTAA...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCACTGTCCTCGTTTTGGTaGATGCATGTATATCCCCAG +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSLSSFW*MHVYPQ
Trigger: CTGGGGATATACATGCATGCACCAAAACGAGGACAG...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCTCACCAACTGGAAAATaGAGAACTGTCCTCGTTTTG +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVSPTGK*RTVLVL
Trigger: CAAAACGAGGACAGTTCTGCATTTTCCAGTTGGTGA...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTTTCCAGAATCTGCTCTaGAGCCTTTTCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESFQNLL*SLFRRL
Trigger: CAGTCTCCGGAAAAGGCTGCAGAGCAGATTCTGGAA...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTCACCATTGGGGCTGTTaGGGACAGTGGAAACTCAAT +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIHHWGC*GQWKLN
Trigger: ATTGAGTTTCCACTGTCCGCAACAGCCCCAATGGTG...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACAGGGCCCAGATATCCGTaGAAGTTAAGGCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTGPRYP*KLRQSQ
Trigger: TTGACTTTGCCTTAACTTCCACGGATATCTGGGCCC...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGAGGCTGCATAAAAACTaGATTCCACTGACCTGCAAC +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKRLHKN*IPLTCN
Trigger: GTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCT...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp TCCAGCAGTAAGCCGAAGGTCTTTCTTCACAGGGACATACTCCAGCATGTCAGCTTTCGAAACTCCTCCTaGGAGAATTCATACTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSSKPKVFLHRDILQHVSFRNSS*ENSYSV
Trigger: AACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAA...GCTGACATGCTGGAGTATGTCCCTGTGAAGAAAGACCTTCGGCTTACTGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp TCTCTGCAGATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACATCCAATTGCATGGATTaGGTTCCTAATCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SLQIRKRVLAILCTPLHTSNCMD*VPNLLQ
Trigger: CTGCAAGAGATTAGGAACCCAATCCATGCAATTGGA...TGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATCTGCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCTCCAATTGCATGGATTaGGTTCCTAATCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVSNCMD*VPNLLQ
Trigger: CTGCAAGAGATTAGGAACCCAATCCATGCAATTGGA...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCATCAGGAAACGAGTACTaGCGATTTTATGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSSGNEY*RFYAPL
Trigger: GAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGA...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCCAATTTGTCGATTTGTaGGGGCAGCTGTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIQFVDL*GQLCIL
Trigger: GAGAATGCACAGCTGCCCCCACAAATCGACAAATTG...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp TTAAGAACAAAGATTCCCCCAGAAGCACATGGTAAGGCAAACAGGGCCTCCCCAAATGTCAGTGAATATTaGCTGCATCTGACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LRTKIPPEAHGKANRASPNVSEY*LHLTVN
Trigger: GTTGACAGTCAGATGCAGTCAATATTCACTGACATT...TGGGGAGGCCCTGTTTGCCTTACCATGTGCTTCTGGGGGAATCTTTGTTCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACACTTTTCCAATGTCAGTaGATATTGACTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTLFQCQ*ILTASD
Trigger: GTCAGATGCAGTCAATATTCACTGACATTGGAAAAG...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp TTAAGAACAAAGATTCCCCCAGAAGCACATGGTAAGGCAAACAGGGCCTCCCCACTTTTCCAATGTCAGTaGATATTGACTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: LRTKIPPEAHGKANRASPLFQCQ*ILTASD
Trigger: GTCAGATGCAGTCAATATTCACTGACATTGGAAAAG...TGGGGAGGCCCTGTTTGCCTTACCATGTGCTTCTGGGGGAATCTTTGTTCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGCAATCGTTGCATTACTaGACTCTGTTTCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSQSLHY*TLFQFH
Trigger: GTGGAACTGAAACAGAGTTCAGTAATGCAACGATTG...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp AAAGATGAAGGCATCATGCTCCACACAATGAACAGCAAGACTGAGGGGACGATCCAATCGTTGCATTACTaGACTCTGTTTCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: KDEGIMLHTMNSKTEGTIQSLHY*TLFQFH
Trigger: GTGGAACTGAAACAGAGTTCAGTAATGCAACGATTG...GATCGTCCCCTCAGTCTTGCTGTTCATTGTGTGGAGCATGATGCCTTCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACCAATCGTTGCATTACTaGACTCTGTTTCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHQSLHY*TLFQFH
Trigger: GTGGAACTGAAACAGAGTTCAGTAATGCAACGATTG...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp ATCGAGACTATAGCGATTACTCTCAGTGCTCACCAACTGGAAAATGCAGAAGAATCATGCTCCACACAATaGACAGCAAGACTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IETIAITLSAHQLENAEESCSTQ*TARLRG
Trigger: TCCCCTCAGTCTTGCTGTTCATTGTGTGGAGCATGA...TTCTTCTGCATTTTCCAGTTGGTGAGCACTGAGAGTAATCGCTATAGTCTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTCAATCAGTGTCTCCTaGGAAGTGAACAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVSISVS*EVNSEE
Trigger: TTCTTCACTGTTCACTTCTCAGGAGACACTGATTGA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTGAACCAACATTGACTTaGCACCAGGGATGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIEPTLT*HQGCSS
Trigger: ACTGCTACATCCCTGGTGTCAAGTCAATGTTGGTTC...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTACTTCAGATGCTGCCTaGCAAAAACATTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIITSDAA*QKHSRA
Trigger: GGCTCTGGAATGTTTTTGTCAGGCAGCATCTGAAGT...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCGTTCAGGCAAACCAATaGCATCTAGTAGTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVVQANQ*HLVVVK
Trigger: TTTTACGACTACTAGATGTCATTGGTTTGCCTGAAC...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGTGCTTCAGTTATGGCTaGTGTAGCCAACTGAATAAC +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKCFSYG*CSQLNN
Trigger: GTTATTCAGTTGGCTACATCAGCCATAACTGAAGCA...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGTCCTTAGAGTAGCCTaGCTTTTCCAGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESVLRVA*LFQSSP
Trigger: AGGTGATGACTGGAAAAGTCAGGCTACTCTAAGGAC...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAAAGCACAGGGTCCTCTaGCTCTTCCGCCCTCCTATC +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLKHRVL*LFRPPI
Trigger: GATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTT...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGGTGAATTCCCGAAAGTaGCTCGGCCTTTCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKVNSRK*LGLSRS
Trigger: TGAGCGCGAAAGGCCGAGGCACTTTCGGGAATTCAC...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp TTGTTGTTCTGTCATTTACCTGGATTGAATCCCTTTTCCATTTCCACTTCTGTTGCCAGCCACGGCATTTaGAGTCCCAATGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LLFCHLPGLNPFSISTSVASHGI*SPNAAD
Trigger: GTCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGC...AACAGAAGTGGAAATGGAAAAGGGATTCAATCCAGGTAAATGACAGAACAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACTTACGGAGAACAACTTaGCACTCTCCACGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHLRRTT*HSPRSK
Trigger: TTTACTACGTGGAGAGTGGCAAGTTGTTCTCCGTAA...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTCCTCTGGCAGAGGCTaGATAAAAACTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIISSGRG*IKTGFH
Trigger: GTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGA...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGGGTGTAAAAAGACTTTaGAGATACATCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVGVKRL*RYISLG
Trigger: CCCCAGAGAGATGTATCTGCAAAGTCTTTTTACACC...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp ATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTATATCTTCCAGAATCTaGTCTGCAGCCTTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: IRKRVLAILCTPLHTIYPISSRI*SAAFSG
Trigger: TCCGGAAAAGGCTGCAGAGCAGATTCTGGAAGATAT...AGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACAATATCTTCCAGAATCTaGTCTGCAGCCTTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTISSRI*SAAFSG
Trigger: TCCGGAAAAGGCTGCAGAGCAGATTCTGGAAGATAT...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGGCACACAATATACCCTaGTGTGTTACTACCATAGAG +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKAHNIP*CVTTIE
Trigger: CTCTATGGTAGTAACACAGCAGGGTATATTGTGTGC...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCTTTTATGCACCCCTCTaGACACAATATACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIFYAPL*TQYTLL
Trigger: CAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAA...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGTACTGGCGATTTTATaGACCCCTCTGCACACAATA +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIVLAIL*TPLHTI
Trigger: TATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTAC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAAACAATCTAATTGCCTaGTGGAATCAGGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTNNLIA*WNQEFG
Trigger: CCCAAATTCCTGATTCCAGCAGGCAATTAGATTGTT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAGTTCGAACTTCTCTaGCAAGCCGCATTCCATACT +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESEFELL*QAAFHT
Trigger: AGTATGGAATGCGGCTTGGCAGAGAAGTTCGAACTC...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACAAGATTTGCAGTGACTaGTTTTGGTGGTCAGCTACA +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHKICSD*FWWSAT
Trigger: TGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCCGATCTGAAGGCGACTaGTCACCCCTGATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFRSEGD*SPLIAV
Trigger: AACAGCTATCAGGGGTGACCAGTCGCCTTCAGATCG...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCGGTAGAGTCCCATGGTaGGGGAATAAGCAAGCCGTA +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFGRVPW*GNKQAV
Trigger: TACGGCTTGCTTATTCCCCCACCATGGGACTCTACC...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGAACTGTCCTCGTTTTaGTGCATGCATGTATATCCC +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIELSSF*CMHVYP
Trigger: GGGATATACATGCATGCACCAAAACGAGGACAGTTC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACATCAGTGCTCACCAACTaGAAAATGCAGAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTSVLTN*KMQNCP
Trigger: AGGACAGTTCTGCATTTTCCAGTTGGTGAGCACTGA...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCAGTAGTCCAATTGCATaGATTGGGTTCCTAATCTCT +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVSSPIA*IGFLIS
Trigger: AGAGATTAGGAACCCAATCCATGCAATTGGACTACT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAATTCAAAGGCTGAGCTaGATTGAATCCCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTIQRLS*IESLFH
Trigger: ATGGAAAAGGGATTCAATCCAGCTCAGCCTTTGAAT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCATTCAAAGGCTGAGCTaGATTGAATCCCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVIQRLS*IESLFH
Trigger: ATGGAAAAGGGATTCAATCCAGCTCAGCCTTTGAAT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTCAATTCAATCCAGTTTaGCTCAGAGGTGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIQFNPV*LRGAFG
Trigger: GCCAAAGGCACCTCTGAGCCAAACTGGATTGAATTG...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAAACCCTCAGCTATTTTaGAAAGTGAAGGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTNPQLF*KVKVSL
Trigger: AAGACTCACCTTCACTTTCCAAAATAGCTGAGGGTT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTGCAGTGACTGCTTTTaGTGGTCAGCTACAACAAGC +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIICSDCF*WSATTS
Trigger: GCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCA...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATATCTCTGTCCTCGTTTTaGTGCATGCATGTATATCCC +
Preference number: 4 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTISLSSF*CMHVYP
Trigger: GGGATATACATGCATGCACCAAAACGAGGACAGAGA...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTCCAGAGGTCTTCCAATaGATGAACCTGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIPEVFQ*MNLFLV
Trigger: AACCAGAAACAGGTTCATTCATTGGAAGACCTCTGG...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAAACCTGTGCACTGTTTaGTTGGTTAACATCAAGATT +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTNLCTV*LVNIKI
Trigger: AATCTTGATGTTAACCAATCAAACAGTGCACAGGTT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCAACCTGTGCACTGTTTaGTTGGTTAACATCAAGATT +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVNLCTV*LVNIKI
Trigger: AATCTTGATGTTAACCAATCAAACAGTGCACAGGTT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCACAATCGTTGCATTACTaGACTCTGTTTCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSQSLHY*TLFQFH
Trigger: GTGGAACTGAAACAGAGTTCAGTAATGCAACGATTG...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATATCAATCAGTGTCTCCTaGGAAGTGAACAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTISISVS*EVNSEE
Trigger: TTCTTCACTGTTCACTTCTCAGGAGACACTGATTGA...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGAGACAAGAGCTTGTTaGTTACACAGTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIETRAC*LHSGDT
Trigger: TGTATCACCACTGTGTAATCAACAAGCTCTTGTCTC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATACTGACACCATACCAATaGATGAACCTGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTILTPYQ*MNLFLV
Trigger: AACCAGAAACAGGTTCATTCATTGGTATGGTGTCAG...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAGTGAATTCCCGAAAGTaGCTCGGCCTTTCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLVNSRK*LGLSRS
Trigger: TGAGCGCGAAAGGCCGAGGCACTTTCGGGAATTCAC...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AACTCAAAGTGTGTGTCCTTTAAAACAGTAACTGTAGACTGCATTAACAAACACGCCAGCCACGGCATTTaGAGTCCCAATGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: NSKCVSFKTVTVDCINKHASHGI*SPNAAD
Trigger: GTCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGC...GTGTTTGTTAATGCAGTCTACAGTTACTGTTTTAAAGGACACACACTTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACCCTGTAAGCAATCGTTaGATTACTGAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHPVSNR*ITELCF
Trigger: GAAACAGAGTTCAGTAATGCAACGATTGCTTACAGG...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp ACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCCCTGTAAGCAATCGTTaGATTACTGAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TGDFMHPSAHNIPCCVTTPVSNR*ITELCF
Trigger: GAAACAGAGTTCAGTAATGCAACGATTGCTTACAGG...GGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTAGCGATTACTCTCAGTaGTCACCAACTGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESSDYSQ*SPTGKC
Trigger: GCATTTTCCAGTTGGTGAGCACTGAGAGTAATCGCT...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGGTTCTCAGCATCATaGCACAGGGCCCAGATATCC +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKWFSAS*HRAQIS
Trigger: GGATATCTGGGCCCTGTGGCATGATGCTGAGAACCA...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp ACTACCATAGAGCTGGGTAAGATTCATTCGAATATTCAAAGGCTGAGCTGTAAATGGTTCTCAGCATCATaGCACAGGGCCCAGATATCC +
Preference number: 4 (lower is better)
Translates to: TTIELGKIHSNIQRLSCKWFSAS*HRAQIS
Trigger: GGATATCTGGGCCCTGTGGCATGATGCTGAGAACCA...TTTACAGCTCAGCCTTTGAATATTCGAATGAATCTTACCCAGCTCTATGGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCAACAGGCATAGAACTTaGACCAGAATTCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVNRHRT*TRILVV
Trigger: TACAACAAGAATTCTGGTGCAAGTTCTATGCCTGTT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TTTATGATCCTGACACAAAGCAAAGATGAAGGCATCATGCTCCACACAATGAACTTCCAGAATCTGCTCTaGAGCCTTTTCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: FMILTQSKDEGIMLHTMNFQNLL*SLFRRL
Trigger: CAGTCTCCGGAAAAGGCTGCAGAGCAGATTCTGGAA...GTTCATTGTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTCAGGATCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTATATCTTCCAGAATCTaGTCTGCAGCCTTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIISSRI*SAAFSG
Trigger: TCCGGAAAAGGCTGCAGAGCAGATTCTGGAAGATAT...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCGGGTTCCTAATCTCTTaGAGTTTACTACAAATATCC +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVGFLIS*SLLQIS
Trigger: GGATATTTGTAGTAAACTGCAAGAGATTAGGAACCC...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTTTTATGCACCCCTCTaGACACAATATACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIFYAPL*TQYTLL
Trigger: CAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAA...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACAGATCAAAAGATCTCTaGAGATCAGGAAACGAGTAC +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHRSKDL*RSGNEY
Trigger: GTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCT...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCAGATCAAAAGATCTCTaGAGATCAGGAAACGAGTAC +
Preference number: 4 (lower is better)
Translates to: DQETSTGDFMHPSAHNIPRSKDL*RSGNEY
Trigger: GTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCT...GGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGAGATCAAAAGATCTCTaGAGATCAGGAAACGAGTAC +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVRSKDL*RSGNEY
Trigger: GTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCT...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAAGCCTCATTAACAGCTaGTGTAAGATCAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTSLINS*CKIKRS
Trigger: AGATCTTTTGATCTTACAGCAGCTGTTAATGAGGCT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCAGCCTCATTAACAGCTaGTGTAAGATCAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVSLINS*CKIKRS
Trigger: AGATCTTTTGATCTTACAGCAGCTGTTAATGAGGCT...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCTCACTGTGCCAGCCTTaGGGTAATTGTGGCGATAGA +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFSLCQP*GNCGDR
Trigger: TCTATCGCCACAATTACCGCAAGGCTGGCACAGTGA...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAAGGGCGATCATACACTaGACCAGACACTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLRAIIH*TRHWLH
Trigger: GTGCAGCCAGTGTCTGGTGCAGTGTATGATCGCCCT...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp ACAGTGAAGAAATATGATCGAGACTATAGCGATTACTCTCAGTGCTCACCAACTACCCCTGATAGCTGTTaGCATCCAGCCTGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: TVKKYDRDYSDYSQCSPTTPDSC*HPACKQ
Trigger: TTGCTTACAGGCTGGATGCCAACAGCTATCAGGGGT...AGTTGGTGAGCACTGAGAGTAATCGCTATAGTCTCGATCATATTTCTTCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp AGCTTCATTTGTGAATTGTCCTGGTGTAAAAAGACTTTGCAGATACATCTCTCTCCAGGTAGAGTCCCATaGTGGGGGAATAAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SFICELSWCKKTLQIHLSPGRVP*WGNKQA
Trigger: GGCTTGCTTATTCCCCCACCATGGGACTCTACCTGG...AGAGAGATGTATCTGCAAAGTCTTTTTACACCAGGACAATTCACAAATGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTTCAGTGCTCACCAACTaGAAAATGCAGAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESSVLTN*KMQNCP
Trigger: AGGACAGTTCTGCATTTTCCAGTTGGTGAGCACTGA...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTAGGCTGCATAAAAACTaGATTCCACTGACCTGCAAC +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESRLHKN*IPLTCN
Trigger: GTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCT...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGTTTCGAAACTCCTCCTaGGAGAATTCATACTCTGTT +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSFRNSS*ENSYSV
Trigger: AACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAA...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGTTTCGAAACTCCTCCTaGGAGAATTCATACTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVFRNSS*ENSYSV
Trigger: AACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAA...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CTCTTCCTCTGGCAGAGGCTGCATAAAAACTGGATTCCACTGACCTGCAACATTAGTAGTCCAATTGCATaGATTGGGTTCCTAATCTCT +
Preference number: 4 (lower is better)
Translates to: LFLWQRLHKNWIPLTCNISSPIA*IGFLIS
Trigger: AGAGATTAGGAACCCAATCCATGCAATTGGACTACT...AATGTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACAGTACTGATAAGTGTTaGAGATTAGACTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHSTDKC*RLDSSV
Trigger: CACACTGGAGTCTAATCTCCAACACTTATCAGTACT...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGGCTCAGAGGTGCCTTTaGCTGAGAGAAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKAQRCL*LREEVR
Trigger: TCTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGC...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCTGGAATCAGGAATTTaGGTTAAGGCTTCATATGCT +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKLESGI*VKASYA
Trigger: AGCATATGAAGCCTTAACCCAAATTCCTGATTCCAG...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACAACCCTCAGCTATTTTaGAAAGTGAAGGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHNPQLF*KVKVSL
Trigger: AAGACTCACCTTCACTTTCCAAAATAGCTGAGGGTT...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTAGTGACTGCTTTTGGTaGTCAGCTACAACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESSDCFW*SATTSQ
Trigger: TTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACT...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTAGTGACTGCTTTTGGTaGTCAGCTACAACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIISDCFW*SATTSQ
Trigger: TTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACT...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCACTGAGCACAGTTTGTaGGCCAGGCACTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFTEHSL*ARHCYC
Trigger: ACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGT...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTACAATGCTGCAGACTGTaGATTCCCGAAAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLQCCRL*IPESAS
Trigger: CGAGGCACTTTCGGGAATTCACAGTCTGCAGCATTG...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCCTTTTCCAATGTCAGTaGATATTGACTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHILFQCQ*ILTASD
Trigger: GTCAGATGCAGTCAATATTCACTGACATTGGAAAAG...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAAACTCCACAATAGTCTaGGGACTAGATACAAACCTA +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSNSTIV*GLDTNL
Trigger: TAGGTTTGTATCTAGTCCTCAGACTATTGTGGAGTT...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCAACTCCACAATAGTCTaGGGACTAGATACAAACCTA +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHINSTIV*GLDTNL
Trigger: TAGGTTTGTATCTAGTCCTCAGACTATTGTGGAGTT...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCGACAGGAACCAACATTaGCTTGACACCAGGGATGTA +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFDRNQH*LDTRDV
Trigger: TACATCCCTGGTGTCAAGTCAATGTTGGTTCCTGTC...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAGATCTCCCCATCCTCTaGGCGAATCAAGCGATCCAA +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSDLPIL*ANQAIQ
Trigger: TTGGATCGCTTGATTCGCTCAGAGGATGGGGAGATC...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGTTCAGGCAAACCAATaGCATCTAGTAGTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSVQANQ*HLVVVK
Trigger: TTTTACGACTACTAGATGTCATTGGTTTGCCTGAAC...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTTGCTTCAGTTATGGCTaGTGTAGCCAACTGAATAAC +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESCFSYG*CSQLNN
Trigger: GTTATTCAGTTGGCTACATCAGCCATAACTGAAGCA...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGAGCAACTGCAACCGCTaGTGGATCATGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLSNCNR*WIMLSQ
Trigger: TTGGCTCAGCATGATCCATCAGCGGTTGCAGTTGCT...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACTTGATTACACAGTGGTaGTACAAGTTATTCTGGACT +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHLITQW*YKLFWT
Trigger: AGTCCAGAATAACTTGTATCACCACTGTGTAATCAA...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACTCAATTCCGAAGTATTaGTGTCCTTTTCCCAATACA +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHSIPKY*CPFPNT
Trigger: TGTATTGGGAAAAGGACATCAATACTTCGGAATTGA...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR GCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCTCCTCTGGCAGAGGCTaGATAAAAACTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFSSGRG*IKTGFH
Trigger: GTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGA...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTGGTGTAAAAAGACTTTaGAGATACATCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIGVKRL*RYISLG
Trigger: CCCCAGAGAGATGTATCTGCAAAGTCTTTTTACACC...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACAACAGGCATAGAACTTaGACCAGAATTCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHNRHRT*TRILVV
Trigger: TACAACAAGAATTCTGGTGCAAGTTCTATGCCTGTT...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTTTCCAGAATCTGCTCTaGAGCCTTTTCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: AELFLQRYCNYETKKEVLFQNLL*SLFRRL
Trigger: CAGTCTCCGGAAAAGGCTGCAGAGCAGATTCTGGAA...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGGGGTTCCTAATCTCTTaGAGTTTACTACAAATATCC +
Preference number: 4 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKGFLIS*SLLQIS
Trigger: GGATATTTGTAGTAAACTGCAAGAGATTAGGAACCC...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp CTCTTCCTCTGGCAGAGGCTGCATAAAAACTGGATTCCACTGACCTGCAACATTGGGTTCCTAATCTCTTaGAGTTTACTACAAATATCC +
Preference number: 4 (lower is better)
Translates to: LFLWQRLHKNWIPLTCNIGFLIS*SLLQIS
Trigger: GGATATTTGTAGTAAACTGCAAGAGATTAGGAACCC...AATGTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCTCTGCCAGAGGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGGCACCAGACACTGGCTaGACAATCCACGCATATTCT +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKAPDTG*TIHAYS
Trigger: AGAATATGCGTGGATTGTGCAGCCAGTGTCTGGTGC...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACAGCCTCTCCTCCAAATTaGAATTTGATGCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTASPPN*NLMHLK
Trigger: CTTCAAATGCATCAAATTGCAATTTGGAGGAGAGGC...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTAAGATTTGCAGTGACTaGTTTTGGTGGTCAGCTACA +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESKICSD*FWWSAT
Trigger: TGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGACCCCTGATAGCTGTTaGCATCCAGCCTGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKTPDSC*HPACKQ
Trigger: TTGCTTACAGGCTGGATGCCAACAGCTATCAGGGGT...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGCGATCTGAAGGCGACTaGTCACCCCTGATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLRSEGD*SPLIAV
Trigger: AACAGCTATCAGGGGTGACCAGTCGCCTTCAGATCG...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGCGATCTGAAGGCGACTaGTCACCCCTGATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLRSEGD*SPLIAV
Trigger: AACAGCTATCAGGGGTGACCAGTCGCCTTCAGATCG...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGGGTAGAGTCCCATGGTaGGGGAATAAGCAAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLGRVPW*GNKQAV
Trigger: TACGGCTTGCTTATTCCCCCACCATGGGACTCTACC...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CCA 90 bp AACTCAAAGTGTGTGTCCTTTAAAACAGTAACTGTAGACTGCATTAACAAACACCCAGGTAGAGTCCCATaGTGGGGGAATAAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: NSKCVSFKTVTVDCINKHPGRVP*WGNKQA
Trigger: GGCTTGCTTATTCCCCCACCATGGGACTCTACCTGG...GTGTTTGTTAATGCAGTCTACAGTTACTGTTTTAAAGGACACACACTTTGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCCCACATCATCAGATATaGTTGTCTCATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIPHHQI*LSHLLS
Trigger: TGACAGAAGATGAGACAACCATATCTGATGATGTGG...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGGCTCAGAGGTGCCTTTaGCTGAGAGAAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLAQRCL*LREEVR
Trigger: TCTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGC...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGCACTGCACCAGACACTaGCTGCACAATCCACGCATA +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLHCTRH*LHNPRI
Trigger: TATGCGTGGATTGTGCAGCCAGTGTCTGGTGCAGTG...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GCCTCCATCTCAGGGCAGACAATTAGGCAACCCATCTCTACTACAAGATTTAGAAACCTGTGCACTGTTTaGTTGGTTAACATCAAGATT +
Preference number: 4 (lower is better)
Translates to: ASISGQTIRQPISTTRFRNLCTV*LVNIKI
Trigger: AATCTTGATGTTAACCAATCAAACAGTGCACAGGTT...TCTAAATCTTGTAGTAGAGATGGGTTGCCTAATTGTCTGCCCTGAGATGGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR TCA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACAAGTTGCAAGGATCTGTaGAATCAACTTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: SDSSALLSCAECRLECCTSCKDL*NQLFQC
Trigger: ACATTGGAAAAGTTGATTTCACAGATCCTTGCAACT...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTGACACAAAGCAAAGATaGAGGCATCATGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCDTKQR*RHHAPH
Trigger: GTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTC...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp ACTACCATAGAGCTGGGTAAGATTCATTCGAATATTCAAAGGCTGAGCTGTAAAGACACAAAGCAAAGATaGAGGCATCATGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: TTIELGKIHSNIQRLSCKDTKQR*RHHAPH
Trigger: GTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTC...TTTACAGCTCAGCCTTTGAATATTCGAATGAATCTTACCCAGCTCTATGGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTAAAACTGGATTCCACTaGCCTGCAACATTATGTTCA +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESKTGFH*PATLCS
Trigger: TGAACATAATGTTGCAGGTCAGTGGAATCCAGTTTT...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTACTTCAGATGCTGCCTaGCAAAAACATTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCTSDAA*QKHSRA
Trigger: GGCTCTGGAATGTTTTTGTCAGGCAGCATCTGAAGT...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGGACAGTGCGATGTTGTaGCTGTTGGCACTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLDSAML*LLALFS
Trigger: AGAGAACAGTGCCAACAGTCACAACATCGCACTGTC...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR GCA 90 bp TTCAAAGTTGATGTATTTCACTACTGTTTGGTTCTCAGCATCATGCCACAGGGCTTACGGAGAACAACTTaGCACTCTCCACGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: FKVDVFHYCLVLSIMPQGLRRTT*HSPRSK
Trigger: TTTACTACGTGGAGAGTGGCAAGTTGTTCTCCGTAA...GCCCTGTGGCATGATGCTGAGAACCAAACAGTAGTGAAATACATCAACTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCATGGATTCCACTGACCTaGAACATTATGTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KICSDCFWWSATTSQQPSWIPLT*NIMFKV
Trigger: AACTTTGAACATAATGTTGCAGGTCAGTGGAATCCA...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGGGTTCCTAATCTCTTaGAGTTTACTACAAATATCC +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIGFLIS*SLLQIS
Trigger: GGATATTTGTAGTAAACTGCAAGAGATTAGGAACCC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TGTTCAAAGTTGATGTATTTCACTACTGTTTGGTTCTCAGCATCATGCCACAGGTTTTATGCACCCCTCTaGACACAATATACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CSKLMYFTTVWFSASCHRFYAPL*TQYTLL
Trigger: CAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAA...CCTGTGGCATGATGCTGAGAACCAAACAGTAGTGAAATACATCAACTTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCGTACTGGCGATTTTATaGACCCCTCTGCACACAATA +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFVLAIL*TPLHTI
Trigger: TATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTAC...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp TTTATGATCCTGACACAAAGCAAAGATGAAGGCATCATGCTCCACACAATGAACGTACTGGCGATTTTATaGACCCCTCTGCACACAATA +
Preference number: 4 (lower is better)
Translates to: FMILTQSKDEGIMLHTMNVLAIL*TPLHTI
Trigger: TATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTAC...GTTCATTGTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTCAGGATCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGAGTTTGGCTCAGAGGTaGCTTTGGCTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLSLAQR*LWLREE
Trigger: CTCTTCTCTCAGCCAAAGGCACCTCTGAGCCAAACT...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR GCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTAACAATCTAATTGCCTaGTGGAATCAGGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESNNLIA*WNQEFG
Trigger: CCCAAATTCCTGATTCCAGCAGGCAATTAGATTGTT...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCCGTAAACAATCTAATTaGCTGCTGGAATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIRKQSN*LLESGI
Trigger: AATTCCTGATTCCAGCAGGCAATTAGATTGTTTACG...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTAGAACTACCACCAACTaGCGTAAACAATCTAATTGC +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIRTTTN*RKQSNC
Trigger: GCAATTAGATTGTTTACGGCAGTTGGTGGTAGTTCT...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGACCCCTGATAGCTGTTaGCATCCAGCCTGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLTPDSC*HPACKQ
Trigger: TTGCTTACAGGCTGGATGCCAACAGCTATCAGGGGT...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCGAACTGTCCTCGTTTTaGTGCATGCATGTATATCCC +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFELSSF*CMHVYP
Trigger: GGGATATACATGCATGCACCAAAACGAGGACAGTTC...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp TGTTCAAAGTTGATGTATTTCACTACTGTTTGGTTCTCAGCATCATGCCACAGGAGGCTGCATAAAAACTaGATTCCACTGACCTGCAAC +
Preference number: 4 (lower is better)
Translates to: CSKLMYFTTVWFSASCHRRLHKN*IPLTCN
Trigger: GTTGCAGGTCAGTGGAATCCAGTTTTTATGCAGCCT...CCTGTGGCATGATGCTGAGAACCAAACAGTAGTGAAATACATCAACTTTGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGATTTGTGAATTGTCCTaGTGTAAAAAGACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSICELS*CKKTLQ
Trigger: CTGCAAAGTCTTTTTACACCAGGACAATTCACAAAT...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp ATATCCACAGTTACTGACTCTTCAATCAGCCGGAGGCATTTTATAAGACATATGTCAGGAAACGAGTACTaGCGATTTTATGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: ISTVTDSSISRRHFIRHMSGNEY*RFYAPL
Trigger: GAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGA...CATATGTCTTATAAAATGCCTCCGGCTGATTGAAGAGTCAGTAACTGTGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGCTCCAGTGTGTCAAGTaGAACATCAGTTGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKLQCVK*NISCQA
Trigger: TGCTTGGCAACTGATGTTCCACTTGACACACTGGAG...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTAGTACTGATAAGTGTTaGAGATTAGACTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIISTDKC*RLDSSV
Trigger: CACACTGGAGTCTAATCTCCAACACTTATCAGTACT...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGCAATTCAATCCAGTTTaGCTCAGAGGTGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKQFNPV*LRGAFG
Trigger: GCCAAAGGCACCTCTGAGCCAAACTGGATTGAATTG...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTAAGGCTGAGCTGGATTaGATCCCTTTTCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCKAELD*IPFPFP
Trigger: TGGAAATGGAAAAGGGATTCAATCCAGCTCAGCCTT...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAGTCCTTAGAGTAGCCTaGCTTTTCCAGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSVLRVA*LFQSSP
Trigger: AGGTGATGACTGGAAAAGTCAGGCTACTCTAAGGAC...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTTGATTACACAGTGGTaGTACAAGTTATTCTGGACT +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIILITQW*YKLFWT
Trigger: AGTCCAGAATAACTTGTATCACCACTGTGTAATCAA...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGACAGCTGCATGTATCTaGCCCATCAGTATGATAGGA +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKTAACI*PISMIG
Trigger: TCCTATCATACTGATGGGTCAGATACATGCAGCTGT...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTAGCGATTACTCTCAGTaGTCACCAACTGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCSDYSQ*SPTGKC
Trigger: GCATTTTCCAGTTGGTGAGCACTGAGAGTAATCGCT...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp ATATCCACAGTTACTGACTCTTCAATCAGCCGGAGGCATTTTATAAGACATATGAGCGATTACTCTCAGTaGTCACCAACTGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: ISTVTDSSISRRHFIRHMSDYSQ*SPTGKC
Trigger: GCATTTTCCAGTTGGTGAGCACTGAGAGTAATCGCT...CATATGTCTTATAAAATGCCTCCGGCTGATTGAAGAGTCAGTAACTGTGGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp GTAACTTCTTTCTTCAGTTCACTCCAGGAAAGATCCAAATTCCTCTCAGTTCCTGCACACAATATACCCTaGTGTGTTACTACCATAGAG +
Preference number: 4 (lower is better)
Translates to: VTSFFSSLQERSKFLSVPAHNIP*CVTTIE
Trigger: CTCTATGGTAGTAACACAGCAGGGTATATTGTGTGC...AGGAACTGAGAGGAATTTGGATCTTTCCTGGAGTGAACTGAAGAAAGAAGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTTTTTATGCACCCCTCTaGACACAATATACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AELFLQRYCNYETKKEVLFYAPL*TQYTLL
Trigger: CAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAA...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGAAGTGGAACATCAGTTaGCAAGCACTCACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLKWNIS*QALTSP
Trigger: TGGGGAAGTGAGTGCTTGGCAACTGATGTTCCACTT...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTCGTAAACAATCTAATTaGCTGCTGGAATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: CFWWSATTSQQPSAILESRKQSN*LLESGI
Trigger: AATTCCTGATTCCAGCAGGCAATTAGATTGTTTACG...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTCAGCCAGATAACAGTTaGCTTGTTTCTCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGQPDNS*LVSQVP
Trigger: GGGGACTTGAGAAACAAGGCAACTGTTATCTGGCTG...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGCAGCCAGATAACAGTTaGCTTGTTTCTCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLQPDNS*LVSQVP
Trigger: GGGGACTTGAGAAACAAGGCAACTGTTATCTGGCTG...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTATGTTTTCATACCACTaGACCAGACACTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGMFSYH*TRHWLH
Trigger: GTGCAGCCAGTGTCTGGTGCAGTGGTATGAAAACAT...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAGGGCCCAGATATCCGTaGAAGTTAAGGCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLGPRYP*KLRQSQ
Trigger: TTGACTTTGCCTTAACTTCCACGGATATCTGGGCCC...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp ATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTATTTGTGAATTGTCCTaGTGTAAAAAGACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: IRKRVLAILCTPLHTIYPICELS*CKKTLQ
Trigger: CTGCAAAGTCTTTTTACACCAGGACAATTCACAAAT...AGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCTCCAATTGCATGGATTaGGTTCCTAATCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFSNCMD*VPNLLQ
Trigger: CTGCAAGAGATTAGGAACCCAATCCATGCAATTGGA...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGCTCCAGTGTGTCAAGTaGAACATCAGTTGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLLQCVK*NISCQA
Trigger: TGCTTGGCAACTGATGTTCCACTTGACACACTGGAG...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGCAATTCAATCCAGTTTaGCTCAGAGGTGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLQFNPV*LRGAFG
Trigger: GCCAAAGGCACCTCTGAGCCAAACTGGATTGAATTG...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAATCAATAGAGGAGTATaGAAGCCACACCATTGGGGC +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLINRGV*KPHHWG
Trigger: GCCCCAATGGTGTGGCTTCCATACTCCTCTATTGAT...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGAAGGCTGAGCTGGATTaGATCCCTTTTCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLKAELD*IPFPFP
Trigger: TGGAAATGGAAAAGGGATTCAATCCAGCTCAGCCTT...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCAACTCCACAATAGTCTaGGGACTAGATACAAACCTA +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFNSTIV*GLDTNL
Trigger: TAGGTTTGTATCTAGTCCTCAGACTATTGTGGAGTT...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGGCTGATGTAGCCAACTaGATAACCAGTTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLADVAN*ITSSGK
Trigger: TTTGCCTGAACTGGTTATTCAGTTGGCTACATCAGC...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGGGAAGCTTAAAAGTCTaGCAGAGTGATATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLGSLKV*QSDMAV
Trigger: CACTGCCATATCACTCTGTCAGACTTTTAAGCTTCC...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGAGCATCCACATATTCTaGCACCAAATCCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLSIHIF*HQIHSF
Trigger: GAAGCTGTGGATTTGGTGTCAGAATATGTGGATGCT...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp TTGTTGTTCTGTCATTTACCTGGATTGAATCCCTTTTCCATTTCCACTTCTGTTCACCATACCAATGAATaGACCTGTTTCTGGTTACGG +
Preference number: 4 (lower is better)
Translates to: LLFCHLPGLNPFSISTSVHHTNE*TCFWLR
Trigger: CCGTAACCAGAAACAGGTTCATTCATTGGTATGGTG...AACAGAAGTGGAAATGGAAAAGGGATTCAATCCAGGTAAATGACAGAACAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTTTACGGAGAACAACTTaGCACTCTCCACGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCLRRTT*HSPRSK
Trigger: TTTACTACGTGGAGAGTGGCAAGTTGTTCTCCGTAA...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCCCTGTAAGCAATCGTTaGATTACTGAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFPVSNR*ITELCF
Trigger: GAAACAGAGTTCAGTAATGCAACGATTGCTTACAGG...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTTCACCAACTGGAAAATaGAGAACTGTCCTCGTTTTG +
Preference number: 4 (lower is better)
Translates to: AELFLQRYCNYETKKEVLSPTGK*RTVLVL
Trigger: CAAAACGAGGACAGTTCTGCATTTTCCAGTTGGTGA...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGAGCGATTACTCTCAGTaGTCACCAACTGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLSDYSQ*SPTGKC
Trigger: GCATTTTCCAGTTGGTGAGCACTGAGAGTAATCGCT...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp ACTACCATAGAGCTGGGTAAGATTCATTCGAATATTCAAAGGCTGAGCTGTAAAGGTGTAAAAAGACTTTaGAGATACATCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TTIELGKIHSNIQRLSCKGVKRL*RYISLG
Trigger: CCCCAGAGAGATGTATCTGCAAAGTCTTTTTACACC...TTTACAGCTCAGCCTTTGAATATTCGAATGAATCTTACCCAGCTCTATGGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTATATCTTCCAGAATCTaGTCTGCAGCCTTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGISSRI*SAAFSG
Trigger: TCCGGAAAAGGCTGCAGAGCAGATTCTGGAAGATAT...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTATATTTTCTGGGACAGTaGGATGTTGTGACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLYFLGQ*DVVTVG
Trigger: GCCAACAGTCACAACATCGCACTGTCCCAGAAAATA...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CCA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTTCAGTGCTCACCAACTaGAAAATGCAGAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGSVLTN*KMQNCP
Trigger: AGGACAGTTCTGCATTTTCCAGTTGGTGAGCACTGA...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp AGAATTCTTGTTGTAAATTTCGAAACTCCTCCTGGGAGAATTCATACTCTGTTAGGGCCCAGATATCCGTaGAAGTTAAGGCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: RILVVNFETPPGRIHTLLGPRYP*KLRQSQ
Trigger: TTGACTTTGCCTTAACTTCCACGGATATCTGGGCCC...TAACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAATTTACAACAAGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTATTTGTGAATTGTCCTaGTGTAAAAAGACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIICELS*CKKTLQ
Trigger: CTGCAAAGTCTTTTTACACCAGGACAATTCACAAAT...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AACTCAAAGTGTGTGTCCTTTAAAACAGTAACTGTAGACTGCATTAACAAACACCCAGAGGTCTTCCAATaGATGAACCTGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: NSKCVSFKTVTVDCINKHPEVFQ*MNLFLV
Trigger: AACCAGAAACAGGTTCATTCATTGGAAGACCTCTGG...GTGTTTGTTAATGCAGTCTACAGTTACTGTTTTAAAGGACACACACTTTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTAATGTCAGTGAATATTaGCTGCATCTGACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: AELFLQRYCNYETKKEVLNVSEY*LHLTVN
Trigger: GTTGACAGTCAGATGCAGTCAATATTCACTGACATT...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGTCAATCAGTGTCTCCTaGGAAGTGAACAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLSISVS*EVNSEE
Trigger: TTCTTCACTGTTCACTTCTCAGGAGACACTGATTGA...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp ACTACCATAGAGCTGGGTAAGATTCATTCGAATATTCAAAGGCTGAGCTGTAAAAAAACTGGATTCCACTaGCCTGCAACATTATGTTCA +
Preference number: 4 (lower is better)
Translates to: TTIELGKIHSNIQRLSCKKTGFH*PATLCS
Trigger: TGAACATAATGTTGCAGGTCAGTGGAATCCAGTTTT...TTTACAGCTCAGCCTTTGAATATTCGAATGAATCTTACCCAGCTCTATGGTAGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTGTTCAGGCAAACCAATaGCATCTAGTAGTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCVQANQ*HLVVVK
Trigger: TTTTACGACTACTAGATGTCATTGGTTTGCCTGAAC...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGAAAAGTCTGACAGAGTaGTATGGCAGTGTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLKSLTE*YGSVKE
Trigger: CTCTTTGACACTGCCATATCACTCTGTCAGACTTTT...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGGAGACAAGAGCTTGTTaGTTACACAGTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLETRAC*LHSGDT
Trigger: TGTATCACCACTGTGTAATCAACAAGCTCTTGTCTC...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR TCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGGTTACAAAGGCTAGGTaGCAATCCAAATCACAAGGT +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLVTKAR*QSKSQG
Trigger: ACCTTGTGATTTGGATTGTCACCTAGCCTTTGTAAC...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGACCATAACATATTACTaGGTCCAAGGACAGGGATTT +
Preference number: 4 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKTITYY*VQGQGF
Trigger: AAATCCCTGTCCTTGGACTCAGTAATATGTTATGGT...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGTCACCAACTGGAAAATaGAGAACTGTCCTCGTTTTG +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLSPTGK*RTVLVL
Trigger: CAAAACGAGGACAGTTCTGCATTTTCCAGTTGGTGA...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR GCA 90 bp TTTATGATCCTGACACAAAGCAAAGATGAAGGCATCATGCTCCACACAATGAACTGGATTCCACTGACCTaGAACATTATGTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: FMILTQSKDEGIMLHTMNWIPLT*NIMFKV
Trigger: AACTTTGAACATAATGTTGCAGGTCAGTGGAATCCA...GTTCATTGTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTCAGGATCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAGGTGTAAAAAGACTTTaGAGATACATCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSGVKRL*RYISLG
Trigger: CCCCAGAGAGATGTATCTGCAAAGTCTTTTTACACC...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp TGTTCAAAGTTGATGTATTTCACTACTGTTTGGTTCTCAGCATCATGCCACAGGAACAGGCATAGAACTTaGACCAGAATTCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: CSKLMYFTTVWFSASCHRNRHRT*TRILVV
Trigger: TACAACAAGAATTCTGGTGCAAGTTCTATGCCTGTT...CCTGTGGCATGATGCTGAGAACCAAACAGTAGTGAAATACATCAACTTTGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAGCACACAATATACCCTaGTGTGTTACTACCATAGAG +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLAHNIP*CVTTIE
Trigger: CTCTATGGTAGTAACACAGCAGGGTATATTGTGTGC...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTAACAATCTAATTGCCTaGTGGAATCAGGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: AELFLQRYCNYETKKEVLNNLIA*WNQEFG
Trigger: CCCAAATTCCTGATTCCAGCAGGCAATTAGATTGTT...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTAGAACTACCACCAACTaGCGTAAACAATCTAATTGC +
Preference number: 4 (lower is better)
Translates to: AELFLQRYCNYETKKEVLRTTTN*RKQSNC
Trigger: GCAATTAGATTGTTTACGGCAGTTGGTGGTAGTTCT...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTAGTAGTCCAATTGCATaGATTGGGTTCCTAATCTCT +
Preference number: 4 (lower is better)
Translates to: AELFLQRYCNYETKKEVLSSPIA*IGFLIS
Trigger: AGAGATTAGGAACCCAATCCATGCAATTGGACTACT...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp TTTATGATCCTGACACAAAGCAAAGATGAAGGCATCATGCTCCACACAATGAACTCAGTGCTCACCAACTaGAAAATGCAGAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FMILTQSKDEGIMLHTMNSVLTN*KMQKKN
Trigger: ATTTTTCTTCTGCATTTTCCAGTTGGTGAGCACTGA...GTTCATTGTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTCAGGATCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp GTAACTTCTTTCTTCAGTTCACTCCAGGAAAGATCCAAATTCCTCTCAGTTCCTGTTCTGTCATTTACCTaGATTGAATCCCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VTSFFSSLQERSKFLSVPVLSFT*IESLFH
Trigger: ATGGAAAAGGGATTCAATCCAGGTAAATGACAGAAC...AGGAACTGAGAGGAATTTGGATCTTTCCTGGAGTGAACTGAAGAAAGAAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR TCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAAATGTCAGTGAATATTaGCTGCATCTGACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLNVSEY*LHLTVN
Trigger: GTTGACAGTCAGATGCAGTCAATATTCACTGACATT...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCACTTTTCCAATGTCAGTaGATATTGACTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSLFQCQ*ILTASD
Trigger: GTCAGATGCAGTCAATATTCACTGACATTGGAAAAG...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp AACTCAAAGTGTGTGTCCTTTAAAACAGTAACTGTAGACTGCATTAACAAACACTCAATCAGTGTCTCCTaGGAAGTGAACAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: NSKCVSFKTVTVDCINKHSISVS*EVNSEE
Trigger: TTCTTCACTGTTCACTTCTCAGGAGACACTGATTGA...GTGTTTGTTAATGCAGTCTACAGTTACTGTTTTAAAGGACACACACTTTGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAAAAACTGGATTCCACTaGCCTGCAACATTATGTTCA +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLKTGFH*PATLCS
Trigger: TGAACATAATGTTGCAGGTCAGTGGAATCCAGTTTT...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAAACTGGATTCCACTaGCCTGCAACATTATGTTCA +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSKTGFH*PATLCS
Trigger: TGAACATAATGTTGCAGGTCAGTGGAATCCAGTTTT...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTAACAGGCATAGAACTTaGACCAGAATTCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCNRHRT*TRILVV
Trigger: TACAACAAGAATTCTGGTGCAAGTTCTATGCCTGTT...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTAGATCAAAAGATCTCTaGAGATCAGGAAACGAGTAC +
Preference number: 4 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGRSKDL*RSGNEY
Trigger: GTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCT...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGAGAACTACCACCAACTaGCGTAAACAATCTAATTGC +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLRTTTN*RKQSNC
Trigger: GCAATTAGATTGTTTACGGCAGTTGGTGGTAGTTCT...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTCCACATCATCAGATATaGTTGTCTCATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGPHHQI*LSHLLS
Trigger: TGACAGAAGATGAGACAACCATATCTGATGATGTGG...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp TTGTTGTTCTGTCATTTACCTGGATTGAATCCCTTTTCCATTTCCACTTCTGTTCCACATCATCAGATATaGTTGTCTCATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LLFCHLPGLNPFSISTSVPHHQI*LSHLLS
Trigger: TGACAGAAGATGAGACAACCATATCTGATGATGTGG...AACAGAAGTGGAAATGGAAAAGGGATTCAATCCAGGTAAATGACAGAACAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAAGTAGTCCAATTGCATaGATTGGGTTCCTAATCTCT +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLSSPIA*IGFLIS
Trigger: AGAGATTAGGAACCCAATCCATGCAATTGGACTACT...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTATTCAAAGGCTGAGCTaGATTGAATCCCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGIQRLS*IESLFH
Trigger: ATGGAAAAGGGATTCAATCCAGCTCAGCCTTTGAAT...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGCTGGAATCAGGAATTTaGGTTAAGGCTTCATATGCT +
Preference number: 4 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLLESGI*VKASYA
Trigger: AGCATATGAAGCCTTAACCCAAATTCCTGATTCCAG...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CCA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTACTGGAATCAGGAATTTaGGTTAAGGCTTCATATGCT +
Preference number: 4 (lower is better)
Translates to: LLSCAECRLECCTHHLQLLESGI*VKASYA
Trigger: AGCATATGAAGCCTTAACCCAAATTCCTGATTCCAG...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR TCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAACCTGTGCACTGTTTaGTTGGTTAACATCAAGATT +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSNLCTV*LVNIKI
Trigger: AATCTTGATGTTAACCAATCAAACAGTGCACAGGTT...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAGTTGCAAGGATCTGTaGAATCAACTTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSSCKDL*NQLFQC
Trigger: ACATTGGAAAAGTTGATTTCACAGATCCTTGCAACT...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR TCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGTGCAGAATGCAGACTTaGATGTTGTACACATCATTT +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLCRMQT*MLYTSF
Trigger: AAATGATGTGTACAACATTCAAGTCTGCATTCTGCA...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCATGGATTCCACTGACCTaGAACATTATGTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSWIPLT*NIMFKV
Trigger: AACTTTGAACATAATGTTGCAGGTCAGTGGAATCCA...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGTGGATTCCACTGACCTaGAACATTATGTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLWIPLT*NIMFKV
Trigger: AACTTTGAACATAATGTTGCAGGTCAGTGGAATCCA...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR GCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAGCCTCATTAACAGCTaGTGTAAGATCAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSSLINS*CKIKRS
Trigger: AGATCTTTTGATCTTACAGCAGCTGTTAATGAGGCT...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp TTGTTGTTCTGTCATTTACCTGGATTGAATCCCTTTTCCATTTCCACTTCTGTTAGCCTCATTAACAGCTaGTGTAAGATCAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: LLFCHLPGLNPFSISTSVSLINS*CKIKRS
Trigger: AGATCTTTTGATCTTACAGCAGCTGTTAATGAGGCT...AACAGAAGTGGAAATGGAAAAGGGATTCAATCCAGGTAAATGACAGAACAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR GCA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCACGTAAACAATCTAATTaGCTGCTGGAATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSRKQSN*LLESGI
Trigger: AATTCCTGATTCCAGCAGGCAATTAGATTGTTTACG...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR GCA 90 bp AACTCAAAGTGTGTGTCCTTTAAAACAGTAACTGTAGACTGCATTAACAAACACTATAACAGAAACAGCTaGATGTATCTGACCCATCAG +
Preference number: 4 (lower is better)
Translates to: NSKCVSFKTVTVDCINKHYNRNS*MYLTHQ
Trigger: CTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA...GTGTTTGTTAATGCAGTCTACAGTTACTGTTTTAAAGGACACACACTTTGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp AACTCAAAGTGTGTGTCCTTTAAAACAGTAACTGTAGACTGCATTAACAAACACAGTACTGATAAGTGTTaGAGATTAGACTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: NSKCVSFKTVTVDCINKHSTDKC*RLDSSV
Trigger: CACACTGGAGTCTAATCTCCAACACTTATCAGTACT...GTGTTTGTTAATGCAGTCTACAGTTACTGTTTTAAAGGACACACACTTTGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTAATCTAATTGCCTGCTaGAATCAGGAATTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGNLIAC*NQEFGL
Trigger: TAACCCAAATTCCTGATTCCAGCAGGCAATTAGATT...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGAATCTAATTGCCTGCTaGAATCAGGAATTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLNLIAC*NQEFGL
Trigger: TAACCCAAATTCCTGATTCCAGCAGGCAATTAGATT...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CCA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGATTTGTGAATTGTCCTaGTGTAAAAAGACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLICELS*CKKTLQ
Trigger: CTGCAAAGTCTTTTTACACCAGGACAATTCACAAAT...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS CCA 90 bp AACGGAACAAAGGCAGGGCCGCGCGGTCGCCGTCACTTCCGGGGGTaGGGCGGGCGGAGCTGCGGACAGGTGAAGCATTCCGGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: NGTKAGPRGRRHFRG*GGRSCGQVKHSGSR
Trigger: TCTGCTCCCGGAATGCTTCACCTGTCCGCAGCTCCGCCCGCCCCACCCCCGGAAGTGACGGCGACCGCGCGGCCCTGCCTTTGTTCCGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000526870.1
CDS-3UTR CAA 90 bp CTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGAGATATTCCAGGTACTGCTGGCTCCGGCCCTTCGTaGCGAGGCTTCCACCGGGAG +
Preference number: 5 (lower is better)
Translates to: LLSQAVEAVELGDIPGTAGSGPS*RGFHRE
Trigger: CTCCCGGTGGAAGCCTCGCAACGAAGGGCCGGAGCC...AGCAGTACCTGGAATATCTCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS-3UTR CAA 90 bp AACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGACGCCAGCCACGGCATTaGCAGTCCCAATGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: NRASPSLLSQAVEAVELGRQPRH*QSQCCR
Trigger: TCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGCG...TCCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS GCA 90 bp ACGGCATTTGCAGTCCCAATGCTGCAGACTGTGAATTCCCGAAAGTaGCTCGGCCTTTCGCGCTCAGCTCCGCTTAGCTCCACGAAGCTC +
Preference number: 5 (lower is better)
Translates to: TAFAVPMLQTVNSRK*LGLSRSAPLSSTKL
Trigger: GAGCTTCGTGGAGCTAAGCGGAGCTGAGCGCGAAAGGCCGAGGCACTTTCGGGAATTCACAGTCTGCAGCATTGGGACTGCAAATGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378460.6
ENST00000526870.1
ENST00000528071.5
ENST00000528501.5
ENST00000529863.1
ENST00000530326.5
CDS-3UTR CAA 90 bp TCTCTGCAGATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACACGCCAGCCACGGCATTaGCAGTCCCAATGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SLQIRKRVLAILCTPLHTRQPRH*QSQCCR
Trigger: TCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGCG...TGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGATCTGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACAAGTGGAACATCAGTaGCCAAGCACTCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: ASTGSSDSSALLSCAECRQVEHQ*PSTHFP
Trigger: GGGGAAGTGAGTGCTTGGCAACTGATGTTCCACTTG...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS TCA 90 bp TCTGCTGATGAACTTCCAGCAACTGCAACCGCTGATGGATCATGCTaGGCCAAAGTGAGGCGGATGCGAGCCAAGGAACACTCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SADELPATATADGSC*AKVRRMRAKEHSFS
Trigger: GGAGAAAGAGTGTTCCTTGGCTCGCATCCGCCTCACTTTGGCTCAGCATGATCCATCAGCGGTTGCAGTTGCTGGAAGTTCATCAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGGCTCAGAGGTGCCTTaGGCTGAGAGAAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTGSEVP*AERRGE
Trigger: CTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGCC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCGGCTCAGAGGTGCCTTaGGCTGAGAGAAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVGSEVP*AERRGE
Trigger: CTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGCC...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACAGATAACAGTTGCCTaGTTTCTCAAGTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: ASTGSSDSSALLSCAECRQITVA*FLKSPE
Trigger: CTCCGGGGACTTGAGAAACAAGGCAACTGTTATCTG...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAATGGAAGCCACACCATaGGGGCTGTTGCGGACAGTG +
Preference number: 5 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTMEATP*GLLRTV
Trigger: CACTGTCCGCAACAGCCCCAATGGTGTGGCTTCCAT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS TCA 90 bp AACTTCCAGCAACTGCAACCGCTGATGGATCATGCTGAGCCAAAGTaGGGCGGATGCGAGCCAAGGAACACTCTTTCTCCAGATCTTCCA +
Preference number: 5 (lower is better)
Translates to: NFQQLQPLMDHAEPK*GGCEPRNTLSPDLP
Trigger: TGGAAGATCTGGAGAAAGAGTGTTCCTTGGCTCGCATCCGCCTCACTTTGGCTCAGCATGATCCATCAGCGGTTGCAGTTGCTGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS TCA 90 bp AGAGTGATATGGCAGTGTCAAAGAGGCCCGCCTGAACCAAGAGAGTaGCCATTTCCTCTGCTGATGAACTTCCAGCAACTGCAACCGCTG +
Preference number: 5 (lower is better)
Translates to: RVIWQCQRGPPEPRE*PFPLLMNFQQLQPL
Trigger: CAGCGGTTGCAGTTGCTGGAAGTTCATCAGCAGAGGAAATGGTCACTCTCTTGGTTCAGGCGGGCCTCTTTGACACTGCCATATCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCACGCCAGCCACGGCATTaGCAGTCCCAATGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: KICSDCFWWSATTSQQPSRQPRH*QSQCCR
Trigger: TCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGCG...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAAAGAGACAACCAGGATaGCTAGGCCATAAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASTGSSDSSALLSCAECRKRQPG*LGHKSC
Trigger: GCAGCTTTTATGGCCTAGCAATCCTGGTTGTCTCTT...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AAACAGGGCCTCCCCATCACTGCTGAGCCAGGCTGTAGAGGCGGTGGAATTAGGGCTATCAAAGTATGCTaGGTGAGGGATAACGAGAAT +
Preference number: 5 (lower is better)
Translates to: KQGLPITAEPGCRGGGIRAIKVC*VRDNEN
Trigger: ATTCTCGTTATCCCTCACCAAGCATACTTTGATAGC...CCTAATTCCACCGCCTCTACAGCCTGGCTCAGCAGTGATGGGGAGGCCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526870.1
CDS GCA 90 bp AACAGTTGCCTTGTTTCTCAAGTCCCCGGAGAGTTCGAACTTCTCTaGCAAGCCGCATTCCATACTCAAACATCACTGTGCCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: NSCLVSQVPGEFELL*QAAFHTQTSLCQPC
Trigger: GCAAGGCTGGCACAGTGATGTTTGAGTATGGAATGCGGCTTGGCAGAGAAGTTCGAACTCTCCGGGGACTTGAGAAACAAGGCAACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS-3UTR CAA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTCGCCAGCCACGGCATTaGCAGTCCCAATGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIRQPRH*QSQCCR
Trigger: TCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGCG...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp ATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTTGTAATCCCAGCACATaGGGAAGCCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: IRKRVLAILCTPLHTIYPCNPST*GSRGGW
Trigger: CCACCCACCTCGGCTTCCCAATGTGCTGGGATTACA...AGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS TCA 90 bp GTCATAATACTGCAGCCTGGGGGTAGACACGATCTCCCCATCCTCTaGGCGAATCAAGCGATCCAAGAATTCCTCTTTGCCTACTTCAGA +
Preference number: 5 (lower is better)
Translates to: VIILQPGGRHDLPIL*ANQAIQEFLFAYFR
Trigger: TCTGAAGTAGGCAAAGAGGAATTCTTGGATCGCTTGATTCGCTCAGAGGATGGGGAGATCGTGTCTACCCCCAGGCTGCAGTATTATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS CCA 90 bp ACTGTTCTCTCCCAGAGCTTGGAGAAGCTGATCAATAGAGGAGTATaGAAGCCACACCATTGGGGCTGTTGCGGACAGTGGAAACTCAAT +
Preference number: 5 (lower is better)
Translates to: TVLSQSLEKLINRGV*KPHHWGCCGQWKLN
Trigger: ATTGAGTTTCCACTGTCCGCAACAGCCCCAATGGTGTGGCTTCCATACTCCTCTATTGATCAGCTTCTCCAAGCTCTGGGAGAGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CAA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAGTGAGAGAGGGCTTCTaGATACTGAAGACAACAGGC +
Preference number: 5 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTVREGF*ILKTTG
Trigger: GCCTGTTGTCTTCAGTATCAAGAAGCCCTCTCTCAC...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCCCAATTCAATCCAGTTaGGCTCAGAGGTGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVPIQSS*AQRCLW
Trigger: CCAAAGGCACCTCTGAGCCAAACTGGATTGAATTGG...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACACACCATTGGGGCTGTaGCGGACAGTGGAAACTCAA +
Preference number: 5 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHTPLGL*RTVETQ
Trigger: TTGAGTTTCCACTGTCCGCAACAGCCCCAATGGTGT...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS TCA 90 bp ATTTCAATTTGTCGATTTGTGGGGGCAGCTGTGCATTCTCCATCATaGTTCCTCTTAGGGGATGCTCCAGGGCGATCATACACTGCACCA +
Preference number: 5 (lower is better)
Translates to: ISICRFVGAAVHSPS*FLLGDAPGRSYTAP
Trigger: TGGTGCAGTGTATGATCGCCCTGGAGCATCCCCTAAGAGGAATCATGATGGAGAATGCACAGCTGCCCCCACAAATCGACAAATTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp CAGCTACCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGGTGAGAGAGGGCTTCTaGATACTGAAGACAACAGGC +
Preference number: 5 (lower is better)
Translates to: QLPFTEHSLWARHCYCSKVREGF*ILKTTG
Trigger: GCCTGTTGTCTTCAGTATCAAGAAGCCCTCTCTCAC...CTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGGTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCACAAGTGGAACATCAGTaGCCAAGCACTCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: KICSDCFWWSATTSQQPSQVEHQ*PSTHFP
Trigger: GGGGAAGTGAGTGCTTGGCAACTGATGTTCCACTTG...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACAAAGAGACAACCAGGATaGCTAGGCCATAAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTKRQPG*LGHKSC
Trigger: GCAGCTTTTATGGCCTAGCAATCCTGGTTGTCTCTT...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCTTCCAGGATTTCAATTaGTCGATTTGTGGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVFQDFN*SICGGS
Trigger: GCTGCCCCCACAAATCGACAAATTGAAATCCTGGAA...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAGTGCAGAATGCAGACTaGAATGTTGTACACATCATT +
Preference number: 5 (lower is better)
Translates to: ASTGSSDSSALLSCAECRVQNAD*NVVHII
Trigger: AATGATGTGTACAACATTCAAGTCTGCATTCTGCAC...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp ATCAGGAAACGAGTACTGGCGATTTTATGCACCCCTCTGCACACAATATACCCTCTTGAACTCAGGAGTTaGAGACCAGGCAACATGGCG +
Preference number: 5 (lower is better)
Translates to: IRKRVLAILCTPLHTIYPLELRS*RPGNMA
Trigger: CGCCATGTTGCCTGGTCTCAAACTCCTGAGTTCAAG...AGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCCAGTACTCGTTTCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGATGCCTTATCAACTTTTaGCTGGTAGTCCTTGTAACT +
Preference number: 5 (lower is better)
Translates to: ASTGSSDSSALLSCAECRCLINF*LVVLVT
Trigger: AGTTACAAGGACTACCAGCAAAAAGTTGATAAGGCA...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530326.5
CDS CCA 90 bp AGCTTGGAGAAGCTGATCAATAGAGGAGTATGGAAGCCACACCATTaGGGCTGTTGCGGACAGTGGAAACTCAATTCCGAAGTATTGATG +
Preference number: 5 (lower is better)
Translates to: SLEKLINRGVWKPHH*GCCGQWKLNSEVLM
Trigger: CATCAATACTTCGGAATTGAGTTTCCACTGTCCGCAACAGCCCCAATGGTGTGGCTTCCATACTCCTCTATTGATCAGCTTCTCCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CAA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTCGCCAGCCACGGCATTaGCAGTCCCAATGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: AELFLQRYCNYETKKEVLRQPRH*QSQCCR
Trigger: TCTGCAGCATTGGGACTGCAAATGCCGTGGCTGGCG...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACACATCTCTCTGGGGTCTaGATCATCTCTGATGACAAT +
Preference number: 5 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTHLSGV*IISDDN
Trigger: ATTGTCATCAGAGATGATCAAGACCCCAGAGAGATG...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GCAAGCACAGGGTCCTCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGAAGCTTCATTTGTGAATaGTCCTGGTGTAAAAAGACT +
Preference number: 5 (lower is better)
Translates to: ASTGSSDSSALLSCAECRSFICE*SWCKKT
Trigger: AGTCTTTTTACACCAGGACAATTCACAAATGAAGCT...TCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGAGGACCCTGTGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACAGTGAGAGAGGGCTTCTaGATACTGAAGACAACAGGC +
Preference number: 5 (lower is better)
Translates to: SDSSALLSCAECRLECCTVREGF*ILKTTG
Trigger: GCCTGTTGTCTTCAGTATCAAGAAGCCCTCTCTCAC...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS GCA 90 bp GCGAATCAAGCGATCCAAGAATTCCTCTTTGCCTACTTCAGATGCTaGCTGACAAAAACATTCCAGAGCCTTCTGTCCTTCTCCTGTAAC +
Preference number: 5 (lower is better)
Translates to: ANQAIQEFLFAYFRC*LTKTFQSLLSFSCN
Trigger: GTTACAGGAGAAGGACAGAAGGCTCTGGAATGTTTTTGTCAGGCAGCATCTGAAGTAGGCAAAGAGGAATTCTTGGATCGCTTGATTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS-3UTR CAA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGCATCTCTCTGGGGTCTaGATCATCTCTGATGACAAT +
Preference number: 5 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVHLSGV*IISDDN
Trigger: ATTGTCATCAGAGATGATCAAGACCCCAGAGAGATG...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACGCAGGCACACCATGTTaGTGTGTGGATTCAAATGTA +
Preference number: 5 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHAGTPC*CVDSNV
Trigger: TACATTTGAATCCACACACAAACATGGTGTGCCTGC...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACATTCCAGGATTTCAATTaGTCGATTTGTGGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SDSSALLSCAECRLECCTFQDFN*SICGGS
Trigger: GCTGCCCCCACAAATCGACAAATTGAAATCCTGGAA...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACAGTTCTCTCCCAGAGCTaGGAGAAGCTGATCAATAGA +
Preference number: 5 (lower is better)
Translates to: SDSSALLSCAECRLECCTVLSQS*EKLINR
Trigger: TCTATTGATCAGCTTCTCCAAGCTCTGGGAGAGAAC...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CAA 90 bp ACCAGGCAACATGGCGAAACCCCGTCTCTGTCCTCGTTTTGGTGCATGCATGTAATCAAAGAGGCACATTaGTTGTTCTGTCATTTACCT +
Preference number: 5 (lower is better)
Translates to: TRQHGETPSLSSFWCMHVIKEAH*LFCHLP
Trigger: AGGTAAATGACAGAACAACAAATGTGCCTCTTTGAT...TACATGCATGCACCAAAACGAGGACAGAGACGGGGTTTCGCCATGTTGCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCAGAACTGTCCTCGTTTaGGTGCATGCATGTATATCC +
Preference number: 5 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIRTVLV*VHACIS
Trigger: GGATATACATGCATGCACCAAAACGAGGACAGTTCT...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAAGAACTGTCCTCGTTTaGGTGCATGCATGTATATCC +
Preference number: 5 (lower is better)
Translates to: KICSDCFWWSATTSQQPSRTVLV*VHACIS
Trigger: GGATATACATGCATGCACCAAAACGAGGACAGTTCT...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GGCGATTTTATGCACCCCTCTGCACACAATATACCCTGCTGTGTTACTACCATACATCTCTCTGGGGTCTaGATCATCTCTGATGACAAT +
Preference number: 5 (lower is better)
Translates to: GDFMHPSAHNIPCCVTTIHLSGV*IISDDN
Trigger: ATTGTCATCAGAGATGATCAAGACCCCAGAGAGATG...TATGGTAGTAACACAGCAGGGTATATTGTGTGCAGAGGGGTGCATAAAATCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCGCAGGCACACCATGTTaGTGTGTGGATTCAAATGTA +
Preference number: 5 (lower is better)
Translates to: TLPPSYLVQNADLNVVHIAGTPC*CVDSNV
Trigger: TACATTTGAATCCACACACAAACATGGTGTGCCTGC...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp TTTCTCAATGGAAATTATTTTTGTTTCGACCAGCAGAGCTCTTCTTACAGAGGTGGCTCAGAGGTGCCTTaGGCTGAGAGAAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: FLNGNYFCFDQQSSSYRGGSEVP*AERRGE
Trigger: CTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGCC...ACCTCTGTAAGAAGAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACTACAAAAGCAGCTATTaGAGACCAAGGTTGAACACC +
Preference number: 5 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHYKSSY*RPRLNT
Trigger: GGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTA...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GCTGCTGTAAGATCAAAAGATCTCTGCAGATCAGGAAACGAGTACTGGCGATTTGTCTCTGTCCTCGTTTaGGTGCATGCATGTATATCC +
Preference number: 5 (lower is better)
Translates to: AAVRSKDLCRSGNEYWRFVSVLV*VHACIS
Trigger: GGATATACATGCATGCACCAAAACGAGGACAGAGAC...AAATCGCCAGTACTCGTTTCCTGATCTGCAGAGATCTTTTGATCTTACAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS TCA 90 bp ACAAGTAGATTTACTTGTTCCAGGATGAACCCCCAAATTCCAGGATaGAATGTTTTCATACCACTGCACCAGACACTGGCTGCACAATCC +
Preference number: 5 (lower is better)
Translates to: TSRFTCSRMNPQIPG*NVFIPLHQTLAAQS
Trigger: GGATTGTGCAGCCAGTGTCTGGTGCAGTGGTATGAAAACATTTCATCCTGGAATTTGGGGGTTCATCCTGGAACAAGTAAATCTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp AAGATTTGCAGTGACTGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCACTCTGTTACACTTCCTaGAAGCTCATTTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: KICSDCFWWSATTSQQPSLCYTS*KLIFNS
Trigger: GCTGTTGAAAATGAGCTTCAAGGAAGTGTAACAGAG...TGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTGCAAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTCAAGTGGAACATCAGTaGCCAAGCACTCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCQVEHQ*PSTHFP
Trigger: GGGGAAGTGAGTGCTTGGCAACTGATGTTCCACTTG...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp AGACCAAGGTTGAACACCAGAAATTGTGTTAGCACCACCAGCAAGCACAGGGTCCTGCAATTGTACATATaGGCAATTTCCCATCAAACA +
Preference number: 5 (lower is better)
Translates to: RPRLNTRNCVSTTSKHRVLQLYI*AISHQT
Trigger: TGTTTGATGGGAAATTGCCAATATGTACAATTGCAG...GACCCTGTGCTTGCTGGTGGTGCTAACACAATTTCTGGTGTTCAACCTTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GTACAGGGTTCCTGTAGGGTAGTCTTAAGTCCTAAGAGGCACCAAGCGGTTACATATTTGAGACCAAGGTaGAACACCAGAAATTGTGTT +
Preference number: 5 (lower is better)
Translates to: VQGSCRVVLSPKRHQAVTYLRPR*NTRNCV
Trigger: AACACAATTTCTGGTGTTCAACCTTGGTCTCAAATA...TGTAACCGCTTGGTGCCTCTTAGGACTTAAGACTACCCTACAGGAACCCTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS CCA 90 bp ACATCCGGGAGGGGTGTGGTAAAAGTAACCTGTGCACTGTTTGATTaGTTAACATCAAGATTATCACACGATTCTGAGTCTCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: TSGRGVVKVTCALFD*LTSRLSHDSESQRH
Trigger: ATGTCTCTGAGACTCAGAATCGTGTGATAATCTTGATGTTAACCAATCAAACAGTGCACAGGTTACTTTTACCACACCCCTCCCGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378460.6
ENST00000526870.1
ENST00000528071.5
ENST00000530326.5
CDS-3UTR CAA 90 bp TGCTTTTGGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTTGGTGTAAAAAGACTTaGCAGATACATCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: CFWWSATTSQQPSAILESWCKKT*QIHLSG
Trigger: CCCAGAGAGATGTATCTGCAAAGTCTTTTTACACCA...ACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTGGTGTAAAAAGACTTaGCAGATACATCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIWCKKT*QIHLSG
Trigger: CCCAGAGAGATGTATCTGCAAAGTCTTTTTACACCA...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp CCATTTACTGAGCACAGTTTGTGGGCCAGGCACTGTTACTGTTCTAAGCAATCGAGCTTCATTTGTGAATaGTCCTGGTGTAAAAAGACT +
Preference number: 5 (lower is better)
Translates to: PFTEHSLWARHCYCSKQSSFICE*SWCKKT
Trigger: AGTCTTTTTACACCAGGACAATTCACAAATGAAGCT...CGATTGCTTAGAACAGTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp AAAGATGAAGGCATCATGCTCCACACAATGAACAGCAAGACTGAGGGGACGATCAGCTTCATTTGTGAATaGTCCTGGTGTAAAAAGACT +
Preference number: 5 (lower is better)
Translates to: KDEGIMLHTMNSKTEGTISFICE*SWCKKT
Trigger: AGTCTTTTTACACCAGGACAATTCACAAATGAAGCT...GATCGTCCCCTCAGTCTTGCTGTTCATTGTGTGGAGCATGATGCCTTCATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp GGTGGTCAGCTACAACAAGCCAACAACCCTCAGCTATTTTGGAAAGTGAAGGTGAGCTTCATTTGTGAATaGTCCTGGTGTAAAAAGACT +
Preference number: 5 (lower is better)
Translates to: GGQLQQANNPQLFWKVKVSFICE*SWCKKT
Trigger: AGTCTTTTTACACCAGGACAATTCACAAATGAAGCT...CACCTTCACTTTCCAAAATAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp CTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACCATCATCAGATATGGTaGTCTCATCTTCTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: LTLPPSYLVQNADLNVVHHHQIW*SHLLSK
Trigger: TTTTGACAGAAGATGAGACAACCATATCTGATGATG...GTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AAAGATGAAGGCATCATGCTCCACACAATGAACAGCAAGACTGAGGGGACGATCCATCATCAGATATGGTaGTCTCATCTTCTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: KDEGIMLHTMNSKTEGTIHHQIW*SHLLSK
Trigger: TTTTGACAGAAGATGAGACAACCATATCTGATGATG...GATCGTCCCCTCAGTCTTGCTGTTCATTGTGTGGAGCATGATGCCTTCATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGCCAATTCAATCCAGTTaGGCTCAGAGGTGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKPIQSS*AQRCLW
Trigger: CCAAAGGCACCTCTGAGCCAAACTGGATTGAATTGG...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGCAGATAACAGTTGCCTaGTTTCTCAAGTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKQITVA*FLKSPE
Trigger: CTCCGGGGACTTGAGAAACAAGGCAACTGTTATCTG...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCCTCAATTCCGAAGTATaGATGTCCTTTTCCCAATAC +
Preference number: 5 (lower is better)
Translates to: TLPPSYLVQNADLNVVHILNSEV*MSFSQY
Trigger: GTATTGGGAAAAGGACATCAATACTTCGGAATTGAG...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CAA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTTTTACTGAGCACAGTTaGTGGGCCAGGCACTGTTAC +
Preference number: 5 (lower is better)
Translates to: AELFLQRYCNYETKKEVLFTEHS*WARHCY
Trigger: GTAACAGTGCCTGGCCCACAAACTGTGCTCAGTAAA...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS TCA 90 bp CTTTTCCAGTCATCACCTGCTTCAGTTATGGCTGATGTAGCCAACTaGATAACCAGTTCAGGCAAACCAATGACATCTAGTAGTCGTAAA +
Preference number: 5 (lower is better)
Translates to: LFQSSPASVMADVAN*ITSSGKPMTSSSRK
Trigger: TTTACGACTACTAGATGTCATTGGTTTGCCTGAACTGGTTATTCAGTTGGCTACATCAGCCATAACTGAAGCAGGTGATGACTGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS GCA 90 bp AATTCCAGGATGAAATGTTTTCATACCACTGCACCAGACACTGGCTaGACAATCCACGCATATTCTGGACGAATAAGTCGTAAACAATTG +
Preference number: 5 (lower is better)
Translates to: NSRMKCFHTTAPDTG*TIHAYSGRISRKQL
Trigger: CAATTGTTTACGACTTATTCGTCCAGAATATGCGTGGATTGTGCAGCCAGTGTCTGGTGCAGTGGTATGAAAACATTTCATCCTGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS CCA 90 bp AATCATTTCAGGCCAATTCAATCCAGTTTGGCTCAGAGGTGCCTTTaGCTGAGAGAAGAGGTGAGATATAATGTGTTTTCTTGCAACTTC +
Preference number: 5 (lower is better)
Translates to: NHFRPIQSSLAQRCL*LREEVRYNVFSCNF
Trigger: GAAGTTGCAAGAAAACACATTATATCTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGCCAAACTGGATTGAATTGGCCTGAAATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378460.6
ENST00000526569.1
ENST00000528071.5
ENST00000530326.5
CDS-3UTR CAA 90 bp TTGTTGTTCTGTCATTTACCTGGATTGAATCCCTTTTCCATTTCCACTTCTGTTGTGAGAGAGGGCTTCTaGATACTGAAGACAACAGGC +
Preference number: 5 (lower is better)
Translates to: LLFCHLPGLNPFSISTSVVREGF*ILKTTG
Trigger: GCCTGTTGTCTTCAGTATCAAGAAGCCCTCTCTCAC...AACAGAAGTGGAAATGGAAAAGGGATTCAATCCAGGTAAATGACAGAACAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCGCAGGCACACCATGTTaGTGTGTGGATTCAAATGTA +
Preference number: 5 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFAGTPC*CVDSNV
Trigger: TACATTTGAATCCACACACAAACATGGTGTGCCTGC...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp TCTGACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATCAGATATGGTaGTCTCATCTTCTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: SDSSALLSCAECRLECCTHHQIW*SHLLSK
Trigger: TTTTGACAGAAGATGAGACAACCATATCTGATGATG...TGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGCCAATTCAATCCAGTTaGGCTCAGAGGTGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLPIQSS*AQRCLW
Trigger: CCAAAGGCACCTCTGAGCCAAACTGGATTGAATTGG...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp ACTCTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCCTGCAATTGTACATATaGGCAATTTCCCATCAAACA +
Preference number: 5 (lower is better)
Translates to: TLPPSYLVQNADLNVVHILQLYI*AISHQT
Trigger: TGTTTGATGGGAAATTGCCAATATGTACAATTGCAG...GATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGCAGATAACAGTTGCCTaGTTTCTCAAGTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLQITVA*FLKSPE
Trigger: CTCCGGGGACTTGAGAAACAAGGCAACTGTTATCTG...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS TCA 90 bp GTTGCAAGGATCTGTGAAATCAACTTTTCCAATGTCAGTGAATATTaGCTGCATCTGACTGTCAACTACCAACTCACTCCTATACATCCG +
Preference number: 5 (lower is better)
Translates to: VARICEINFSNVSEY*LHLTVNYQLTPIHP
Trigger: CGGATGTATAGGAGTGAGTTGGTAGTTGACAGTCAGATGCAGTCAATATTCACTGACATTGGAAAAGTTGATTTCACAGATCCTTGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS-3UTR CAA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTAGAACTGTCCTCGTTTaGGTGCATGCATGTATATCC +
Preference number: 5 (lower is better)
Translates to: AELFLQRYCNYETKKEVLRTVLV*VHACIS
Trigger: GGATATACATGCATGCACCAAAACGAGGACAGTTCT...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTCATCTCTCTGGGGTCTaGATCATCTCTGATGACAAT +
Preference number: 5 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCHLSGV*IISDDN
Trigger: ATTGTCATCAGAGATGATCAAGACCCCAGAGAGATG...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp TATAACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGAGACAACCAGGATaGCTAGGCCATAAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: YNRNSCMYLTHQYDRKNSKRQPG*LGHKSC
Trigger: GCAGCTTTTATGGCCTAGCAATCCTGGTTGTCTCTT...TGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp CTTCCGCCCTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTATTTGAGACCAAGGTaGAACACCAGAAATTGTGTT +
Preference number: 5 (lower is better)
Translates to: LPPSYLVQNADLNVVHIIYLRPR*NTRNCV
Trigger: AACACAATTTCTGGTGTTCAACCTTGGTCTCAAATA...AATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAGGGCGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp GCAGAGCTCTTCTTACAGAGGTACTGTAACTATGAGACAAAGAAAGAAGTTCTTTGGTGTAAAAAGACTTaGCAGATACATCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: AELFLQRYCNYETKKEVLWCKKT*QIHLSG
Trigger: CCCAGAGAGATGTATCTGCAAAGTCTTTTTACACCA...AAGAACTTCTTTCTTTGTCTCATAGTTACAGTACCTCTGTAAGAAGAGCTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGCTCTGTTACACTTCCTaGAAGCTCATTTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKLCYTS*KLIFNS
Trigger: GCTGTTGAAAATGAGCTTCAAGGAAGTGTAACAGAG...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp TTTATGATCCTGACACAAAGCAAAGATGAAGGCATCATGCTCCACACAATGAACTGTCATTTACCTGGATaGAATCCCTTTTCCATTTCC +
Preference number: 5 (lower is better)
Translates to: FMILTQSKDEGIMLHTMNCHLPG*NPFSIS
Trigger: GGAAATGGAAAAGGGATTCAATCCAGGTAAATGACA...GTTCATTGTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTCAGGATCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp TTTATGATCCTGACACAAAGCAAAGATGAAGGCATCATGCTCCACACAATGAACAAAGAGGCACATTTGTaGTTCTGTCATTTACCTGGA +
Preference number: 5 (lower is better)
Translates to: FMILTQSKDEGIMLHTMNKEAHL*FCHLPG
Trigger: TCCAGGTAAATGACAGAACAACAAATGTGCCTCTTT...GTTCATTGTGTGGAGCATGATGCCTTCATCTTTGCTTTGTGTCAGGATCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS CCA 90 bp ACCATAGAGCTGGGTAAGATTCATTCGAATATTCAAAGGCTGAGCTaGATTGAATCCCTTTTCCATTTCCACTTCTGTTTCATAATCCAT +
Preference number: 5 (lower is better)
Translates to: TIELGKIHSNIQRLS*IESLFHFHFCFIIH
Trigger: ATGGATTATGAAACAGAAGTGGAAATGGAAAAGGGATTCAATCCAGCTCAGCCTTTGAATATTCGAATGAATCTTACCCAGCTCTATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS-3UTR CAA 90 bp AGCTTCATTTGTGAATTGTCCTGGTGTAAAAAGACTTTGCAGATACATCTCTCTTGGTGTAAAAAGACTTaGCAGATACATCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: SFICELSWCKKTLQIHLSWCKKT*QIHLSG
Trigger: CCCAGAGAGATGTATCTGCAAAGTCTTTTTACACCA...AGAGAGATGTATCTGCAAAGTCTTTTTACACCAGGACAATTCACAAATGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGCTCTGTTACACTTCCTaGAAGCTCATTTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLLCYTS*KLIFNS
Trigger: GCTGTTGAAAATGAGCTTCAAGGAAGTGTAACAGAG...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AGCTTCATTTGTGAATTGTCCTGGTGTAAAAAGACTTTGCAGATACATCTCTCTCTCTGTTACACTTCCTaGAAGCTCATTTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: SFICELSWCKKTLQIHLSLCYTS*KLIFNS
Trigger: GCTGTTGAAAATGAGCTTCAAGGAAGTGTAACAGAG...AGAGAGATGTATCTGCAAAGTCTTTTTACACCAGGACAATTCACAAATGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp AGAATTCTTGTTGTAAATTTCGAAACTCCTCCTGGGAGAATTCATACTCTGTTAGCAGGCACACCATGTTaGTGTGTGGATTCAAATGTA +
Preference number: 5 (lower is better)
Translates to: RILVVNFETPPGRIHTLLAGTPC*CVDSNV
Trigger: TACATTTGAATCCACACACAAACATGGTGTGCCTGC...TAACAGAGTATGAATTCTCCCAGGAGGAGTTTCGAAATTTACAACAAGAATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528501.5
CDS-3UTR CAA 90 bp GTAACTTGTCTGAATTGGGTCAGGTCTAACTCCAAAACCACTCTGCAATATTTCCATCATCAGATATGGTaGTCTCATCTTCTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: VTCLNWVRSNSKTTLQYFHHQIW*SHLLSK
Trigger: TTTTGACAGAAGATGAGACAACCATATCTGATGATG...GAAATATTGCAGAGTGGTTTTGGAGTTAGACCTGACCCAATTCAGACAAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp GTGAATCATATACAAAAGCAGCTATTTGAGACCAAGGTTGAACACCAGAAATTGTACAAAAGCAGCTATTaGAGACCAAGGTTGAACACC +
Preference number: 5 (lower is better)
Translates to: VNHIQKQLFETKVEHQKLYKSSY*RPRLNT
Trigger: GGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTA...CAATTTCTGGTGTTCAACCTTGGTCTCAAATAGCTGCTTTTGTATATGATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS-3UTR CAA 90 bp AGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGTGTCAATGGAAATTATTTTaGTTTCGACCAGCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: RNSCMYLTHQYDRKNSKCQWKLF*FRPAEL
Trigger: GAGCTCTGCTGGTCGAAACAAAAATAATTTCCATTG...ACACTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp AACAGAAACAGCTGCATGTATCTGACCCATCAGTATGATAGGAAAAACTCAAAGCTGCAATTGTACATATaGGCAATTTCCCATCAAACA +
Preference number: 5 (lower is better)
Translates to: NRNSCMYLTHQYDRKNSKLQLYI*AISHQT
Trigger: TGTTTGATGGGAAATTGCCAATATGTACAATTGCAG...CTTTGAGTTTTTCCTATCATACTGATGGGTCAGATACATGCAGCTGTTTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS-3UTR CAA 90 bp CTGAAAAACTCAAGAAGGGTCAAAAGGCTATACAAGCAAGTAGTATACAGATTGTGCCTTATCAACTTTTaGCTGGTAGTCCTCCAATTT +
Preference number: 5 (lower is better)
Translates to: LKNSRRVKRLYKQVVYRLCLINF*LVVLQF
Trigger: AAATTGGAGGACTACCAGCAAAAAGTTGATAAGGCA...CAATCTGTATACTACTTGCTTGTATAGCCTTTTGACCCTTCTTGAGTTTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS-3UTR CAA 90 bp CTCCTATCTTGTGCAGAATGCAGACTTGAATGTTGTACACATCATTTACAGTTAGTGCAGAATGCAGACTaGAATGTTGTACACATCATT +
Preference number: 5 (lower is better)
Translates to: LLSCAECRLECCTHHLQLVQNAD*NVVHII
Trigger: AATGATGTGTACAACATTCAAGTCTGCATTCTGCAC...TAACTGTAAATGATGTGTACAACATTCAAGTCTGCATTCTGCACAAGATAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS GCA 72 bp GCAGTCCCAATGCTGCAGACTGTGAATTCCCGAAAGTaGCTCGGCCTTTCGCGCTCAGCTCCGCTTAGCTCC +
Preference number: 6 (lower is better)
Translates to: AVPMLQTVNSRK*LGLSRSAPLSS
Trigger: GGAGCTAAGCGGAGCTGAGCGCGAAAGGCCGAGGCACTTTCGGGAATTCACAGTCTGCAGCATTGGGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378460.6
ENST00000526870.1
ENST00000528071.5
ENST00000528501.5
ENST00000529863.1
ENST00000530326.5
CDS TCA 72 bp CAGCCACGGCATTTGCAGTCCCAATGCTGCAGACTGTaGATTCCCGAAAGTGCCTCGGCCTTTCGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: QPRHLQSQCCRL*IPESASAFRAQ
Trigger: CTGAGCGCGAAAGGCCGAGGCACTTTCGGGAATTCACAGTCTGCAGCATTGGGACTGCAAATGCCGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378460.6
ENST00000526870.1
ENST00000528071.5
ENST00000528501.5
ENST00000529863.1
ENST00000530326.5
CDS GCA 72 bp GCCTCCTGGGTTCAAGCGATTCTCATGCTACAGCCTTaGCTCCCGAGGAGCTGGGATTATAGGCACCTGCCA +
Preference number: 6 (lower is better)
Translates to: ASWVQAILMLQP*LPRSWDYRHLP
Trigger: TGGCAGGTGCCTATAATCCCAGCTCCTCGGGAGGCAAGGCTGTAGCATGAGAATCGCTTGAACCCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527126.1
CDS GCA 72 bp GGGCTCAAGCCATCCTCCCCTGTTGGCCTACCAATGTaGGGGCATGACAGGTATGAGCCACTGCAATCAGTC +
Preference number: 6 (lower is better)
Translates to: GLKPSSPVGLPM*GHDRYEPLQSV
Trigger: GACTGATTGCAGTGGCTCATACCTGTCATGCCCGCACATTGGTAGGCCAACAGGGGAGGATGGCTTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532773.1
CDS TCA 72 bp CTGCAGCCTGGGGGTAGACACGATCTCCCCATCCTCTaGGCGAATCAAGCGATCCAAGAATTCCTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: LQPGGRHDLPIL*ANQAIQEFLFA
Trigger: GGCAAAGAGGAATTCTTGGATCGCTTGATTCGCTCAGAGGATGGGGAGATCGTGTCTACCCCCAGGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS TCA 72 bp GAACTTCCAGCAACTGCAACCGCTGATGGATCATGCTaGGCCAAAGTGAGGCGGATGCGAGCCAAGGAACAC +
Preference number: 6 (lower is better)
Translates to: ELPATATADGSC*AKVRRMRAKEH
Trigger: GTGTTCCTTGGCTCGCATCCGCCTCACTTTGGCTCAGCATGATCCATCAGCGGTTGCAGTTGCTGGAAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS TCA 72 bp CAACTGCAACCGCTGATGGATCATGCTGAGCCAAAGTaGGGCGGATGCGAGCCAAGGAACACTCTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: QLQPLMDHAEPK*GGCEPRNTLSP
Trigger: TGGAGAAAGAGTGTTCCTTGGCTCGCATCCGCCTCACTTTGGCTCAGCATGATCCATCAGCGGTTGCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS CCA 72 bp TCCCAGAGCTTGGAGAAGCTGATCAATAGAGGAGTATaGAAGCCACACCATTGGGGCTGTTGCGGACAGTGG +
Preference number: 6 (lower is better)
Translates to: SQSLEKLINRGV*KPHHWGCCGQW
Trigger: CCACTGTCCGCAACAGCCCCAATGGTGTGGCTTCCATACTCCTCTATTGATCAGCTTCTCCAAGCTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS TCA 72 bp TGGCAGTGTCAAAGAGGCCCGCCTGAACCAAGAGAGTaGCCATTTCCTCTGCTGATGAACTTCCAGCAACTG +
Preference number: 6 (lower is better)
Translates to: WQCQRGPPEPRE*PFPLLMNFQQL
Trigger: CAGTTGCTGGAAGTTCATCAGCAGAGGAAATGGTCACTCTCTTGGTTCAGGCGGGCCTCTTTGACACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS TCA 72 bp GCACTAGACTCCTTAGTAGTGATGACAGATGAGAGCTaGTTGGCTGCTAGCCAGGCCCAGGCTTCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: ALDSLVVMTDES*LAASQAQASAC
Trigger: ACAAGCAGAAGCCTGGGCCTGGCTAGCAGCCAATCAGCTCTCATCTGTCATCACTACTAAGGAGTCTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000530326.5
ENST00000532773.1
CDS GCA 72 bp GCTCCAGGGCGATCATACACTGCACCAGACACTGGCTaGACAATCCACGCATATTCTGGACGAATAAGTCGT +
Preference number: 6 (lower is better)
Translates to: APGRSYTAPDTG*TIHAYSGRISR
Trigger: ACGACTTATTCGTCCAGAATATGCGTGGATTGTGCAGCCAGTGTCTGGTGCAGTGTATGATCGCCCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS GCA 72 bp AGCTGTGCATTCTCCATCATGATTCCTCTTAGGGGATaGTCCAGGGCGATCATACACTGCACCAGACACTGG +
Preference number: 6 (lower is better)
Translates to: SCAFSIMIPLRG*SRAIIHCTRHW
Trigger: CCAGTGTCTGGTGCAGTGTATGATCGCCCTGGAGCATCCCCTAAGAGGAATCATGATGGAGAATGCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS CCA 72 bp GGATGCTCCAGGGCGATCATACACTGCACCAGACACTaGCTGCACAATCCACGCATATTCTGGACGAATAAG +
Preference number: 6 (lower is better)
Translates to: GCSRAIIHCTRH*LHNPRIFWTNK
Trigger: CTTATTCGTCCAGAATATGCGTGGATTGTGCAGCCAGTGTCTGGTGCAGTGTATGATCGCCCTGGAGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378460.6
ENST00000530326.5
CDS CAA 90 bp GGACAGTGCGATGTTGTGACTGTTGGCACTGTTCTCTCCCAGAGCTaGGAGAAGCTGATCAATAGAGGAGTATGGAAGCCACACCATTGG +
Preference number: 6 (lower is better)
Translates to: GQCDVVTVGTVLSQS*EKLINRGVWKPHHW
Trigger: CCAATGGTGTGGCTTCCATACTCCTCTATTGATCAGCTTCTCCAAGCTCTGGGAGAGAACAGTGCCAACAGTCACAACATCGCACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS TCA 72 bp CTGTTGGCACTGTTCTCTCCCAGAGCTTGGAGAAGCTaGTCAATAGAGGAGTATGGAAGCCACACCATTGGG +
Preference number: 6 (lower is better)
Translates to: LLALFSPRAWRS*SIEEYGSHTIG
Trigger: CCCAATGGTGTGGCTTCCATACTCCTCTATTGATCAGCTTCTCCAAGCTCTGGGAGAGAACAGTGCCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS GCA 72 bp CTTGTTTCTCAAGTCCCCGGAGAGTTCGAACTTCTCTaGCAAGCCGCATTCCATACTCAAACATCACTGTGC +
Preference number: 6 (lower is better)
Translates to: LVSQVPGEFELL*QAAFHTQTSLC
Trigger: GCACAGTGATGTTTGAGTATGGAATGCGGCTTGGCAGAGAAGTTCGAACTCTCCGGGGACTTGAGAAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS CCA 72 bp AAGCTGATCAATAGAGGAGTATGGAAGCCACACCATTaGGGCTGTTGCGGACAGTGGAAACTCAATTCCGAA +
Preference number: 6 (lower is better)
Translates to: KLINRGVWKPHH*GCCGQWKLNSE
Trigger: TTCGGAATTGAGTTTCCACTGTCCGCAACAGCCCCAATGGTGTGGCTTCCATACTCCTCTATTGATCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS GCA 72 bp CAAGCGATCCAAGAATTCCTCTTTGCCTACTTCAGATaGTGCCTGACAAAAACATTCCAGAGCCTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: QAIQEFLFAYFR*CLTKTFQSLLS
Trigger: GGACAGAAGGCTCTGGAATGTTTTTGTCAGGCAGCATCTGAAGTAGGCAAAGAGGAATTCTTGGATCGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS GCA 72 bp ACCCCCAAATTCCAGGATGAAATGTTTTCATACCACTaGACCAGACACTGGCTGCACAATCCACGCATATTC +
Preference number: 6 (lower is better)
Translates to: TPKFQDEMFSYH*TRHWLHNPRIF
Trigger: GAATATGCGTGGATTGTGCAGCCAGTGTCTGGTGCAGTGGTATGAAAACATTTCATCCTGGAATTTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528071.5
CDS TCA 72 bp CTGACTTTTCCAGTCATCACCTGCTTCAGTTATGGCTaGTGTAGCCAACTGAATAACCAGTTCAGGCAAACC +
Preference number: 6 (lower is better)
Translates to: LTFPVITCFSYG*CSQLNNQFRQT
Trigger: GGTTTGCCTGAACTGGTTATTCAGTTGGCTACATCAGCCATAACTGAAGCAGGTGATGACTGGAAAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS GCA 72 bp CATTTCAGGCCAATTCAATCCAGTTTGGCTCAGAGGTaGCTTTGGCTGAGAGAAGAGGTGAGATATAATGTG +
Preference number: 6 (lower is better)
Translates to: HFRPIQSSLAQR*LWLREEVRYNV
Trigger: CACATTATATCTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGCCAAACTGGATTGAATTGGCCTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378460.6
ENST00000526569.1
ENST00000528071.5
ENST00000530326.5
CDS GCA 72 bp TGTAGCTGTGAGCGTTCACAAAGAACTACCACCAACTaGCGTAAACAATCTAATTGCCTGCTGGAATCAGGA +
Preference number: 6 (lower is better)
Translates to: CSCERSQRTTTN*RKQSNCLLESG
Trigger: TCCTGATTCCAGCAGGCAATTAGATTGTTTACGGCAGTTGGTGGTAGTTCTTTGTGAACGCTCACAGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS CCA 72 bp AGGCCAATTCAATCCAGTTTGGCTCAGAGGTGCCTTTaGCTGAGAGAAGAGGTGAGATATAATGTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: RPIQSSLAQRCL*LREEVRYNVFS
Trigger: AGAAAACACATTATATCTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGCCAAACTGGATTGAATTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378460.6
ENST00000526569.1
ENST00000528071.5
ENST00000530326.5
CDS TCA 72 bp TCATCACCTGCTTCAGTTATGGCTGATGTAGCCAACTaGATAACCAGTTCAGGCAAACCAATGACATCTAGT +
Preference number: 6 (lower is better)
Translates to: SSPASVMADVAN*ITSSGKPMTSS
Trigger: ACTAGATGTCATTGGTTTGCCTGAACTGGTTATTCAGTTGGCTACATCAGCCATAACTGAAGCAGGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS TCA 72 bp TCAACTTTTCCAATGTCAGTGAATATTGACTGCATCTaGCTGTCAACTACCAACTCACTCCTATACATCCGG +
Preference number: 6 (lower is better)
Translates to: STFPMSVNIDCI*LSTTNSLLYIR
Trigger: CCGGATGTATAGGAGTGAGTTGGTAGTTGACAGTCAGATGCAGTCAATATTCACTGACATTGGAAAAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS TCA 72 bp GTAATTGTGAGTCATAAGGTCCACAGCTCTAGCACGTaGCTCAATTATTCCCACAACCTCATTATGCAGATT +
Preference number: 6 (lower is better)
Translates to: VIVSHKVHSSST*LNYSHNLIMQI
Trigger: AATCTGCATAATGAGGTTGTGGGAATAATTGAGTCACGTGCTAGAGCTGTGGACCTTATGACTCACAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS CAA 90 bp ATAACTGGTAATTGCAGTAATCATTTCAGGCCAATTCAATCCAGTTaGGCTCAGAGGTGCCTTTGGCTGAGAGAAGAGGTGAGATATAAT +
Preference number: 6 (lower is better)
Translates to: ITGNCSNHFRPIQSS*AQRCLWLREEVRYN
Trigger: ATTATATCTCACCTCTTCTCTCAGCCAAAGGCACCTCTGAGCCAAACTGGATTGAATTGGCCTGAAATGATTACTGCAATTACCAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378460.6
ENST00000526569.1
ENST00000528071.5
ENST00000530326.5
CDS CAA 90 bp GTGACAATCCAAATCACAAGGTCCGACGATATAATAAATCCCGTGTaGCCTTATCAACTTTTTGCTGGTAGTCCTCCAATTTGTCAAGTA +
Preference number: 6 (lower is better)
Translates to: VTIQITRSDDIINPV*PYQLFAGSPPICQV
Trigger: TACTTGACAAATTGGAGGACTACCAGCAAAAAGTTGATAAGGCAACACGGGATTTATTATATCGTCGGACCTTGTGATTTGGATTGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS CCA 72 bp AGGGGTGTGGTAAAAGTAACCTGTGCACTGTTTGATTaGTTAACATCAAGATTATCACACGATTCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: RGVVKVTCALFD*LTSRLSHDSES
Trigger: AGACTCAGAATCGTGTGATAATCTTGATGTTAACCAATCAAACAGTGCACAGGTTACTTTTACCACACCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378460.6
ENST00000526870.1
ENST00000528071.5
ENST00000530326.5
CDS CCA 72 bp CTGGGTAAGATTCATTCGAATATTCAAAGGCTGAGCTaGATTGAATCCCTTTTCCATTTCCACTTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: LGKIHSNIQRLS*IESLFHFHFCF
Trigger: GAAACAGAAGTGGAAATGGAAAAGGGATTCAATCCAGCTCAGCCTTTGAATATTCGAATGAATCTTACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5
CDS CAA 72 bp CAAATCACAAGGTCCGACGATATAATAAATCCCGTGTaGCCTTATCAACTTTTTGCTGGTAGTCCTCCAATT +
Preference number: 6 (lower is better)
Translates to: QITRSDDIINPV*PYQLFAGSPPI
Trigger: AATTGGAGGACTACCAGCAAAAAGTTGATAAGGCAACACGGGATTTATTATATCGTCGGACCTTGTGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378460.6
CDS CAA 72 bp CAAATCACAAGGTCCGACGATATAATAAATCCCGTGTaGCCTTATCAACTTTTTGCTGGTAGTCCTTGTAAC +
Preference number: 6 (lower is better)
Translates to: QITRSDDIINPV*PYQLFAGSPCN
Trigger: GTTACAAGGACTACCAGCAAAAAGTTGATAAGGCAACACGGGATTTATTATATCGTCGGACCTTGTGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530326.5
CDS TCA 72 bp CTTGCAACTTCTTGGAAGAATAACTCCACAATAGTCTaGGGACTAGATACAAACCTATTTGCCATTAAAGCA +
Preference number: 6 (lower is better)
Translates to: LATSWKNNSTIV*GLDTNLFAIKA
Trigger: TGCTTTAATGGCAAATAGGTTTGTATCTAGTCCTCAGACTATTGTGGAGTTATTCTTCCAAGAAGTTGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378460.6
ENST00000528071.5
ENST00000530326.5