RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUMA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137497

Ensembl transcript IDs: ENST00000351960.10, ENST00000358965.10, ENST00000366394.7, ENST00000368959.9, ENST00000393695.8, ENST00000534971.1, ENST00000534987.5, ENST00000535087.5, ENST00000535111.5, ENST00000535838.5, ENST00000535947.5, ENST00000536119.5, ENST00000537217.5, ENST00000537905.5, ENST00000537930.5, ENST00000540588.1, ENST00000540626.5, ENST00000540843.5, ENST00000541262.5, ENST00000541584.5, ENST00000541641.5, ENST00000541719.5, ENST00000542977.5, ENST00000543009.5, ENST00000543450.1, ENST00000543937.5, ENST00000544129.5, ENST00000544238.5, ENST00000545721.1, ENST00000546036.1, ENST00000546131.1, ENST00000613205.4, ENST00000616538.4, ENST00000620566.4

Found 2486 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCCAGGGTGCGGGCAGGCATCACTGTC +
Preference number: 1 (lower is better)
Translates to: CPCSRPPGPAPRRRQ*RTRDQARVRAGITV
Trigger: GACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR CCA 90 bp GGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAGGGACCAGGC +
Preference number: 1 (lower is better)
Translates to: GKVGRAPTLSMLQAP*ASSEKAPVKDQGPG
Trigger: GCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR CCA 90 bp AAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAGTCCTaGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACCAGGAC +
Preference number: 1 (lower is better)
Translates to: KSILWQVLPPGQTQS*TSRVRAPAGPSHQD
Trigger: GTCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR CCA 90 bp GGGACCAGGCCAGGGTGCGGGCAGGCATCACTGTCTCTAGGGGTTTaGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCACTGAGAGGGAC +
Preference number: 1 (lower is better)
Translates to: GTRPGCGQASLSLGV*LLLAWELREGTERD
Trigger: GTCCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR CCA 90 bp ACCAGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTaGGCCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTT +
Preference number: 1 (lower is better)
Translates to: TRSDPVLDFKSEGPC*AQPPGQQEPGPTPL
Trigger: AAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR TCA 90 bp AACGACGAGCAGAACTGCGAGTGGTGGGGCGGTAGCCAGGCAAGCTaGGCAGGGCTGAGTTGCCATAATCGGGAGAACCCAGGCGAGCTA +
Preference number: 1 (lower is better)
Translates to: NDEQNCEWWGGSQAS*AGLSCHNRENPGEL
Trigger: TAGCTCGCCTGGGTTCTCCCGATTATGGCAACTCAGCCCTGCTCAGCTTGCCTGGCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 90 bp GGCTCTTCCACATCTAGCTTCTTGGTCATGGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCC +
Preference number: 1 (lower is better)
Translates to: GSSTSSFLVMVMLMI*VVRRRAERVLRPES
Trigger: GGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAGAAGCTAGATGTGGAAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 90 bp CAATGCGGTTCCAGTCATCCAGCTGCTCAGGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCCTTCCTGGAGGGGCCCCACTGGACA +
Preference number: 1 (lower is better)
Translates to: QCGSSHPAAQAHPGK*PCRSCSFLEGPHWT
Trigger: TGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTCTACATGGGCACTTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAACCGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR CCA 90 bp GAGATAGGTGAGGCTGGTTCTCCAGGGACGCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTATGGAAAGGAAACCTGCTGAGGTAC +
Preference number: 1 (lower is better)
Translates to: EIGEAGSPGTLVPSG*VRGSLLWKGNLLRY
Trigger: GTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAACCAGCCTCACCTATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 90 bp CTCAGGCCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTaGTTGGCGAGCCCAATCACCAAGCTTCCTGAACAGCTCCTAACC +
Preference number: 1 (lower is better)
Translates to: LRPPSHERGHNPMSS*LASPITKLPEQLLT
Trigger: GGTTAGGAGCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR TCA 90 bp CTCTCACCTAGACTCATCATGGCACTGACAGAGGAAGATGAGTGGTaGCAAGCCAAGAACTCAGGCCAGGCTGCCCAGGGTCAAACCCCA +
Preference number: 1 (lower is better)
Translates to: LSPRLIMALTEEDEW*QAKNSGQAAQGQTP
Trigger: TGGGGTTTGACCCTGGGCAGCCTGGCCTGAGTTCTTGGCTTGTCACCACTCATCTTCCTCTGTCAGTGCCATGATGAGTCTAGGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR TCA 90 bp CGTCTGGCTGGGTACGAGGCAGCTTGCTATGGAAAGGAAACCTGCTaGGGTACAGTCCTTCACGCTAGAAGGCATTTTGTCCAGCCCTTT +
Preference number: 1 (lower is better)
Translates to: RLAGYEAACYGKETC*GTVLHARRHFVQPF
Trigger: AAAGGGCTGGACAAAATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTGCCTCGTACCCAGCCAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 90 bp TCACATCTCAGCTTAGTCAGGCTCTTTCACAGCCTCTGTTCACACTaGTCTTCTCGTCAACCTGGCACACACACCTATGGATGCTTTCAA +
Preference number: 1 (lower is better)
Translates to: SHLSLVRLFHSLCSH*SSRQPGTHTYGCFQ
Trigger: TTGAAAGCATCCATAGGTGTGTGTGCCAGGTTGACGAGAAGAGCAGTGTGAACAGAGGCTGTGAAAGAGCCTGACTAAGCTGAGATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 2 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWARRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 2 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWACWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: TVHAPGPLGQLREGASEGGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 2 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTRPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp CGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGGGAGGACGCTGGTGCCGTCTaGCTGGGTACGAGGCAGCTT +
Preference number: 2 (lower is better)
Translates to: RRAERVLRPESRKTSPREDAGAV*LGTRQL
Trigger: AAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTC...CTCCCTGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR CCA 90 bp TGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCACCAGGGATTCTACCTTaGGGGGCAGGCGCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: CADERSGSYDPSPGRRLPPGILP*GAGAGR
Trigger: TCTCCCAGCGCCTGCCCCCCAAGGTAGAATCCCTGG...TGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: TVHAPGPLGQLREGASEGCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: PLLRHRAHPSWERASSGRPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: SHPSASLGKVGCELLLKAPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: PLLRHRAHPSWERASSGRRPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: TPLLRHRAHPSWERASSGMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 2 (lower is better)
Translates to: SHPSASLGKVGCELLLKARRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 2 (lower is better)
Translates to: RAGITVSRGLATVGLGAERRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAAGAGTGAGGGCCCCTaGTGGGCCCAGCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: PTPLLRHRAHPSWERASSKSEGP*WAQPPG
Trigger: TCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp ACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTACCTTGGGCAAGTGACTaGCCCTCTATGCCCCAGATT +
Preference number: 2 (lower is better)
Translates to: TGHPGLGTTSRTASGGAVPWASD*PSMPQI
Trigger: AATCTGGGGCATAGAGGGGCAGTCACTTGCCCAAGG...TACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 2 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp ACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTACCCACCAGATGCCCATaGCTGCTTCACAGCAAACAC +
Preference number: 2 (lower is better)
Translates to: TGHPGLGTTSRTASGGAVPTRCP*LLHSKH
Trigger: GTGTTTGCTGTGAAGCAGCCATGGGCATCTGGTGGG...TACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp CGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGGGAGACCAAGGAAAGCACTTaGCCTGGGCCTTCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: RRAERVLRPESRKTSPRETKEST*PGPSFQ
Trigger: CTGAAAGGAAGGCCCAGGTCAAGTGCTTTCCTTGGT...CTCCCTGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRRPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 2 (lower is better)
Translates to: PLLRHRAHPSWERASSGRHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp TGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGACTCATCATGGCACTaGCAGAGGAAGATGAGTGGT +
Preference number: 2 (lower is better)
Translates to: CADERSGSYDPSPGRRLPDSSWH*QRKMSG
Trigger: ACCACTCATCTTCCTCTGTCAGTGCCATGATGAGTC...TGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR GCA 90 bp TGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGTCCTTTCCCTGGTCTaGTTCATCTCCTCTCACCTA +
Preference number: 2 (lower is better)
Translates to: CADERSGSYDPSPGRRLPVLSLV*FISSHL
Trigger: TAGGTGAGAGGAGATGAAGCAGACCAGGGAAAGGAC...TGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGGAAAGAGCATCCTCTaGCAGGTGCTCCCACCAGGT +
Preference number: 2 (lower is better)
Translates to: SHPSASLGKVGCELLLKAGKSIL*QVLPPG
Trigger: ACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp TGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAACTGACAGAGGAAGATaGGTGGTGACAAGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: CADERSGSYDPSPGRRLPTDRGR*VVTSQE
Trigger: TTCTTGGCTTGTCACCACTCATCTTCCTCTGTCAGT...TGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp CATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCTTACGCCAGATGCCCATGGCTaGTTCACAGCAAACACGTCC +
Preference number: 2 (lower is better)
Translates to: HGDVDDLRGAPTSGAGLTPDAHG*FTANTS
Trigger: GGACGTGTTTGCTGTGAAGCAGCCATGGGCATCTGG...CGTAAGACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 2 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGGCTACTGTTGGCCTaGGAGCTGAGAGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: SHPSASLGKVGCELLLKAWLLLA*ELREGT
Trigger: AGTGCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGCCTACTCCTCTTATaGTCCCTTCTAGATCCAGAG +
Preference number: 2 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGLLLL*SLLDPE
Trigger: CTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGTCAGACCCAGTCCTaGACTTCAAGAGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: PTPLLRHRAHPSWERASSGQTQS*TSRVRA
Trigger: GGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp CATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCTTACGAGCCTCTGTTCACACTaGTCTTCTCGTCAACCTGGC +
Preference number: 2 (lower is better)
Translates to: HGDVDDLRGAPTSGAGLTSLCSH*SSRQPG
Trigger: GCCAGGTTGACGAGAAGAGCAGTGTGAACAGAGGCT...CGTAAGACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGGCCTACTCCTCTTATaGTCCCTTCTAGATCCAGAG +
Preference number: 2 (lower is better)
Translates to: PLLRHRAHPSWERASSGRGLLLL*SLLDPE
Trigger: CTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR CAA 90 bp AGGCCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTaGGCGAGCCCAATCACCAAGCTTCCTGAACAGCTCCTAACCACA +
Preference number: 2 (lower is better)
Translates to: RPPSHERGHNPMSSC*ASPITKLPEQLLTT
Trigger: TGTGGTTAGGAGCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 2 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTACTCCTCTTATaGTCCCTTCTAGATCCAGAG +
Preference number: 2 (lower is better)
Translates to: PTPLLRHRAHPSWERASSGLLLL*SLLDPE
Trigger: CTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 2 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLRRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 2 (lower is better)
Translates to: PLLRHRAHPSWERASSGRPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp CCCATGGCTGCTTCACAGCAAACACGTCCCAATCTAAGCCCACTTCTCTGTTCTACCACTGGGGAACCTTaGGCAAGTGACTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: PMAASQQTRPNLSPLLCSTTGEP*ASDCPS
Trigger: AGAGGGGCAGTCACTTGCCCAAGGTTCCCCAGTGGT...AGAACAGAGAAGTGGGCTTAGATTGGGACGTGTTTGCTGTGAAGCAGCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 2 (lower is better)
Translates to: PTPLLRHRAHPSWERASSPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 2 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CCA 90 bp CCTTTCAGTCCACTCCCCTGGCTTCTCCTAATAGCTCCTCATAGTGGCAATGCCATAGTCGGTCTCCAATaGGCCTTCCTGGCCTCACAT +
Preference number: 2 (lower is better)
Translates to: PFSPLPWLLLIAPHSGNAIVGLQ*AFLASH
Trigger: ATGTGAGGCCAGGAAGGCCCATTGGAGACCGACTAT...GGCATTGCCACTATGAGGAGCTATTAGGAGAAGCCAGGGGAGTGGACTGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR GCA 90 bp CTCAGGCCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGCCTTTCTTGACCACTTaGTTTTTATTCCAACTGTGC +
Preference number: 2 (lower is better)
Translates to: LRPPSHERGHNPMSSCLAPFLTT*FLFQLC
Trigger: GCACAGTTGGAATAAAAAGCAAGTGGTCAAGAAAGG...CGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGGCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR GCA 90 bp CAGCTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCCTCTGTTCTTCCTCCTaGATCTCCCATTTCAGTGAA +
Preference number: 2 (lower is better)
Translates to: QLAMERKPAEVQSFTLEGLCSSS*ISHFSE
Trigger: TTCACTGAAATGGGAGATGCAGGAGGAAGAACAGAG...GCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR TCA 90 bp GCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCATTTTGCCACGAAGCCTTTCTTaGCCACTTGCTTTTTATTCC +
Preference number: 2 (lower is better)
Translates to: AMERKPAEVQSFTLEGILPRSLS*PLAFYS
Trigger: GGAATAAAAAGCAAGTGGTCAAGAAAGGCTTCGTGG...CAAAATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR TCA 90 bp TTCCCATCCTTACTACAAGCAGATGAGGTCAAGCAGCCCATCTCTCTGATTTTTAATCACCAAGCTTCCTaGACAGCTCCTAACCACACC +
Preference number: 2 (lower is better)
Translates to: FPSLLQADEVKQPISLIFNHQAS*TAPNHT
Trigger: GGTGTGGTTAGGAGCTGTTCAGGAAGCTTGGTGATT...AAAAATCAGAGAGATGGGCTGCTTGACCTCATCTGCTTGTAGTAAGGATGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR CCA 72 bp GGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAG +
Preference number: 3 (lower is better)
Translates to: GRAPTLSMLQAP*ASSEKAPVKDQ
Trigger: CTGGTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR CCA 72 bp CTCTGGCAGGTGCTCCCACCAGGTCAGACCCAGTCCTaGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: LWQVLPPGQTQS*TSRVRAPAGPS
Trigger: GCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCTGGTGGGAGCACCTGCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: TVHAPGPLGQLREGASEGTVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPTVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR GCA 72 bp GCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTaGTCCCACCAGGTCAGACCCAGTCCTGGACTTCAA +
Preference number: 3 (lower is better)
Translates to: AHPSWERASSGR*SHQVRPSPGLQ
Trigger: TTGAAGTCCAGGACTGGGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR CCA 72 bp GAGGCTGGTTCTCCAGGGACGCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTATGGAAAGGAAACCTG +
Preference number: 3 (lower is better)
Translates to: EAGSPGTLVPSG*VRGSLLWKGNL
Trigger: CAGGTTTCCTTTCCATAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAACCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 72 bp TCCAGTCATCCAGCTGCTCAGGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCCTTCCTGGAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: SSHPAAQAHPGK*PCRSCSFLEGP
Trigger: GGGCCCCTCCAGGAAGGAACAGCTTCTACATGGGCACTTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQTVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CAA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: PTPLLRHRAHPSWERASSTVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
3UTR-3UTR CAA 90 bp ACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTATCCACGAAGCCTTTCTaGACCACTTGCTTTTTATTC +
Preference number: 3 (lower is better)
Translates to: TGHPGLGTTSRTASGGAVSTKPF*TTCFLF
Trigger: GAATAAAAAGCAAGTGGTCAAGAAAGGCTTCGTGGA...TACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR TCA 72 bp GTCGTCCTGCTTGGCGAGCCCAATCACCAAGCTTCCTaGACAGCTCCTAACCACACCCCACTCCATGCTCAT +
Preference number: 3 (lower is better)
Translates to: VVLLGEPNHQAS*TAPNHTPLHAH
Trigger: ATGAGCATGGAGTGGGGTGTGGTTAGGAGCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR TCA 72 bp AGACTCATCATGGCACTGACAGAGGAAGATGAGTGGTaGCAAGCCAAGAACTCAGGCCAGGCTGCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: RLIMALTEEDEW*QAKNSGQAAQG
Trigger: ACCCTGGGCAGCCTGGCCTGAGTTCTTGGCTTGTCACCACTCATCTTCCTCTGTCAGTGCCATGATGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 72 bp CCCAGCTCTACCACTGGGGAACCTTGGGCAAGTGACTaGCCCTCTATGCCCCAGATTCATCTGTTAAAGGAG +
Preference number: 3 (lower is better)
Translates to: PSSTTGEPWASD*PSMPQIHLLKE
Trigger: CTCCTTTAACAGATGAATCTGGGGCATAGAGGGGCAGTCACTTGCCCAAGGTTCCCCAGTGGTAGAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 72 bp ACATCTAGCTTCTTGGTCATGGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCGGAGCGGGTCTTACGA +
Preference number: 3 (lower is better)
Translates to: TSSFLVMVMLMI*VVRRRAERVLR
Trigger: TCGTAAGACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAGAAGCTAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR CCA 72 bp GCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTaGCGAGCCCAATCACCAAGCTTCCTGAACAGCTCC +
Preference number: 3 (lower is better)
Translates to: AMNVGIIQCRPA*RAQSPSFLNSS
Trigger: GGAGCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR CCA 72 bp AAGCAGGAGCAGACCGCGTGCTGTAGAACGATGAGTTaGCGCTGTCTGGCTCTTCCACATCTAGCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: KQEQTACCRTMS*RCLALPHLASW
Trigger: CCAAGAAGCTAGATGTGGAAGAGCCAGACAGCGCCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTGCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR CAA 90 bp CAGCTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCCCAATGTCGTCCTGCTaGGCGAGCCCAATCACCAAG +
Preference number: 3 (lower is better)
Translates to: QLAMERKPAEVQSFTLEGPMSSC*ASPITK
Trigger: CTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGG...GCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 72 bp CCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTaGTTGGCGAGCCCAATCACCAAGCTTCCTGAACAG +
Preference number: 3 (lower is better)
Translates to: PSHERGHNPMSS*LASPITKLPEQ
Trigger: CTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 72 bp TGCTCTTCTCGTCAACCTGGCACACACACCTATGGATaGTTTCAAGACTCAGCAGGAGCGATAGCTTCCACG +
Preference number: 3 (lower is better)
Translates to: CSSRQPGTHTYG*FQDSAGAIAST
Trigger: CGTGGAAGCTATCGCTCCTGCTGAGTCTTGAAAGCATCCATAGGTGTGTGTGCCAGGTTGACGAGAAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR-3UTR CAA 90 bp CCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGCCCAGCCTTTCTTGACCACTaGCTTTTTATTCCAACTGTG +
Preference number: 3 (lower is better)
Translates to: PPSHERGHNPMSSCLASPAFLDH*LFIPTV
Trigger: CACAGTTGGAATAAAAAGCAAGTGGTCAAGAAAGGC...TGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR TCA 72 bp GGGTACGAGGCAGCTTGCTATGGAAAGGAAACCTGCTaGGGTACAGTCCTTCACGCTAGAAGGCATTTTGTC +
Preference number: 3 (lower is better)
Translates to: GYEAACYGKETC*GTVLHARRHFV
Trigger: GACAAAATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTGCCTCGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR GCA 72 bp AGCTTAGTCAGGCTCTTTCACAGCCTCTGTTCACACTaGTCTTCTCGTCAACCTGGCACACACACCTATGGA +
Preference number: 3 (lower is better)
Translates to: SLVRLFHSLCSH*SSRQPGTHTYG
Trigger: TCCATAGGTGTGTGTGCCAGGTTGACGAGAAGAGCAGTGTGAACAGAGGCTGTGAAAGAGCCTGACTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGTCAACCGGGCCCCATaGGCCTGGGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVVNRAP*AWEACS
Trigger: GGAGCAGGCCTCCCAGGCTCATGGGGCCCGGTTGAC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGTCAACCGGGCCCCATaGGCCTGGGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAVNRAP*AWEACS
Trigger: GGAGCAGGCCTCCCAGGCTCATGGGGCCCGGTTGAC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGGCAGCCATGGCCTCTaGCAGCTCCCGCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVGSHGL*QLPPQD
Trigger: GTCCTGCGGCGGGAGCTGGCAGAGGCCATGGCTGCC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTGGGCCTGGAGGCGCTaGGCCTCCTGCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVWAWRR*ASCWLS
Trigger: CGAGAGCCAGCAGGAGGCCCAGCGCCTCCAGGCCCA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGGGCCTGGAGGCGCTaGGCCTCCTGCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAWAWRR*ASCWLS
Trigger: CGAGAGCCAGCAGGAGGCCCAGCGCCTCCAGGCCCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGAGGGGTGGCACCAATaGCGGCAGCAGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAEGWHQ*RQQWRR
Trigger: GCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGAGGGGTGGCACCAATaGCGGCAGCAGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVEGWHQ*RQQWRR
Trigger: GCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCTGCTGCCGGGTGGTaGTGCCAGTGCCCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAAAAGW*CQCPRL
Trigger: TAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCGCACGCTCAGCCTGTaGGGTCAGCTCCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRTLSL*GQLLPQ
Trigger: CTGCGGCAGGAGCTGACCTCACAGGCTGAGCGTGCG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWARPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGGCGGCGCTGGCTGTaGTGGTGGCAATGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAWRRWL*WWQCAE
Trigger: CTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTGGCTCTCGCCTCCCTaGGCCTGGACAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVWLSPP*AWTAFS
Trigger: GCTGAAGGCTGTCCAGGCTCAGGGAGGCGAGAGCCA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGGCTCTCGCCTCCCTaGGCCTGGACAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAWLSPP*AWTAFS
Trigger: GCTGAAGGCTGTCCAGGCTCAGGGAGGCGAGAGCCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGTGCCTCCAGCTGCTTaGGAGCCGCATCCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDVPPAA*EPHPAP
Trigger: GGGAGCGGGATGCGGCTCTCAAGCAGCTGGAGGCAC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCGCTCCTCCTGCTGCTaGCCCTGGCTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRSSCC*PWLSIS
Trigger: GCTGATGGAGAGCCAGGGGCAGCAGCAGGAGGAGCG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCCACGCTCCTCCTGCTaGTGCCCCTGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVPRSSC*CPWLSI
Trigger: GATGGAGAGCCAGGGGCAGCAGCAGGAGGAGCGTGG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGGGAGTGGGCCTGGAGGCGCTaGGCCTCCTGCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RRAERVLRPESRKTSPREWAWRR*ASCWLS
Trigger: CGAGAGCCAGCAGGAGGCCCAGCGCCTCCAGGCCCA...CTCCCTGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCCAGGCTGCGCACCTaGGCAGTAAGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASRLRT*AVRWRQ
Trigger: CTGCCGCCACCTTACTGCCCAGGTGCGCAGCCTGGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCTCGCAGGCTAGCCTaGGAAGCAGGAGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAARRLA*EAGADR
Trigger: GCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCTCGCAGGCTAGCCTaGGAAGCAGGAGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVARRLA*EAGADR
Trigger: GCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCGGCGCTGGCTGTGGTaGTGGCAATGCGCGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWARRWLW*WQCAEN
Trigger: GTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCAGCAGTGGCGGCGCTaGCTGTGGTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVQQWRR*LWWWQC
Trigger: GCATTGCCACCACCACAGCCAGCGCCGCCACTGCTG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGTCAGAGAGGCCACCTaGGCAGTCAACCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVVREAT*AVNRAP
Trigger: TGGGGCCCGGTTGACTGCCCAGGTGGCCTCTCTGAC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCCAGCTCCTCACGGTaGCGTTTCTCGGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASSSSR*RFSAAA
Trigger: GGCCGCTGCCGAGAAACGCCACCGTGAGGAGCTGGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGGACAGGGCCTTCTTTaGGGCTCCCCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDGQGLL*GSPPQK
Trigger: CTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCCACACGCTGCTCGTTaGGGGCGTTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDPHAAR*GRSAAA
Trigger: TGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCTGCCCGCAGCTGCTaGGCTGTTCGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASARSC*AVRSCS
Trigger: AGAGCAGGAGCGAACAGCTCAGCAGCTGCGGGCAGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCACCCGTTTGCGCTGCTaGCGGGTGGTGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWATRLRC*RVVMPV
Trigger: CACTGGCATCACCACCCGGCAGCAGCGCAAACGGGT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGACCCGTTTGCGCTGCTaGCGGGTGGTGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVTRLRC*RVVMPV
Trigger: CACTGGCATCACCACCCGGCAGCAGCGCAAACGGGT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTGTGGTGGTGGCAATaGGCGGAGAACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLWWWQ*AENGGF
Trigger: GAACCCGCCGTTCTCCGCGCATTGCCACCACCACAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCCAGTGCCTCCAGCTaGTTGAGAGCCGCATCCCGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSSASS*LRAASR
Trigger: GCGGGATGCGGCTCTCAAGCAGCTGGAGGCACTGGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGGGCCTGGGCCTCATaGTGTTCCTGGCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDWAWAS*CSWRAV
Trigger: GACAGCCCGCCAGGAACAGCATGAGGCCCAGGCCCA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCGGGAGGCTGTTTCCTaGTGCTCACCTGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAREAVS*CSPALR
Trigger: GCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTCCCG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCCCGCTCCATAGCCTaGAGCGCTGCCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASRSIA*SAACVL
Trigger: CAGCACACAGGCAGCGCTGCAGGCTATGGAGCGGGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCGCTCCTCCTGCTGCTaGCCCTGGCTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRSSCC*PWLSIS
Trigger: GCTGATGGAGAGCCAGGGGCAGCAGCAGGAGGAGCG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATTCCTCTCAGCCTCTTaGCGGCCCCGGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGFLSAS*RPRATW
Trigger: CCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCTGGTGTGCTCGAGCTaGAGGGTGGAGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDLVCSS*RVERAC
Trigger: GCAGGCCCTCTCCACCCTGCAGCTCGAGCACACCAG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCGGCCTGCTCGGCCTaGAGCTGCTGGCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPAACSA*SCWQRC
Trigger: GCACCTCTGCCAGCAGCTGCAGGCCGAGCAGGCCGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCCAGCTCCCGGGCAGTaGTCTGTGCTTCTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAPAPGQ*SVLLAA
Trigger: TGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALVPSG*VRGSLL
Trigger: CAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGTTCTCCAGGGACGCTaGTGCCGTCTGGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVVLQGR*CRLAGY
Trigger: GTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAAC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTAGCCAGGCAGAACTGCGAGTGGTaGGGCGGTAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: HPGLGTTSRTASGGAVARQNCEW*GGSQAS
Trigger: GCTTGCCTGGCTACCGCCCCACCACTCGCAGTTCTG...CCTGGCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGAGCAGAACTGCGAGTaGTGGGGCGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVEQNCE*WGGSQA
Trigger: TGCCTGGCTACCGCCCCACCACTCGCAGTTCTGCTC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGAGCAGAACTGCGAGTaGTGGGGCGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAEQNCE*WGGSQA
Trigger: TGCCTGGCTACCGCCCCACCACTCGCAGTTCTGCTC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTGGACACCCCGGCCTaGGAACGACGAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLDTPA*ERRAEL
Trigger: CAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTGGACACCCCGGCCTaGGAACGACGAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALDTPA*ERRAEL
Trigger: CAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGGCGGCGCTGGCTGTaGTGGTGGCAATGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGWRRWL*WWQCAE
Trigger: CTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGGTGGCGGAGGCCCTaGGAGGCCTGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAWWRRP*EACSCC
Trigger: ACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCCTCCTGCAGCTCCTaGCGGGCCTTCTCACATTCC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVASCSS*RAFSHS
Trigger: GGAATGTGAGAAGGCCCGCCAGGAGCTGCAGGAGGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCCTCCTGCAGCTCCTaGCGGGCCTTCTCACATTCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAASCSS*RAFSHS
Trigger: GGAATGTGAGAAGGCCCGCCAGGAGCTGCAGGAGGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAGGGCAAGGTCAGCCTaGGCACGGCCCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPRARSA*ARPRSW
Trigger: CCAGGAGCGGGGCCGTGCCCAGGCTGACCTTGCCCT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCAGCCAACTCCCGTTaGGCCGAGGCTAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAAANSR*AEAKAL
Trigger: GAGTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCGGCCTGCAGCTGCTaGCAGAGGTGCTTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASACSC*QRCLAG
Trigger: GCCAGCTAAGCACCTCTGCCAGCAGCTGCAGGCCGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAACTGCCGGCCAAGGTTaGCCCGCTCACCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPTAGQG*PAHPAP
Trigger: GGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCATGGCTCTCGCCTCCCTaGGCCTGGACAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CADERSGSYDPSPGRRLPWLSPP*AWTAFS
Trigger: GCTGAAGGCTGTCCAGGCTCAGGGAGGCGAGAGCCA...TGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGGACAGGGCCTTCTTTaGGGCTCCCCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGGQGLL*GSPPQK
Trigger: CTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGGTGTGAGCTGCTGCTaGAGGCTGTCCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGGVSCC*RLSPNP
Trigger: GGGGTTGGGGGACAGCCTTCAGCAGCAGCTCACACC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCACTTCAGTCTCAGCCTaGTGGGCCTCCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWATSVSA*WASPSC
Trigger: GCAGCTTGGGGAGGCCCATCAGGCTGAGACTGAAGT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGAGGCTAAGGCACTCTaGCTGTGCCCTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVEAKAL*LCPSSW
Trigger: CCAGGAGCTAGGGCACAGTCAGAGTGCCTTAGCCTC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGTGGGCTGGCCGCCTaGTTCTCATTCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASGLAA*FSFSRA
Trigger: AGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGTGGGCTGGCCGCCTaGTTCTCATTCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSGLAA*FSFSRA
Trigger: AGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTCCGCAGCTGCTCCTaGAGCTCTTGGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALRSCS*SSWFCC
Trigger: GCAGCAGAACCAAGAGCTGCAGGAGCAGCTGCGGAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGCATGGGCAACCTGTaGCTCCAGGCTGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDCMGNL*LQAAHL
Trigger: CAGGTGCGCAGCCTGGAGGCACAGGTTGCCCATGCA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCCCAGGTCTCGAAGCTaGTGGTCTGCATGGGCAACC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAPRSRS*WSAWAT
Trigger: GGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTACTCCAGGGACGCTGGTaGCGTCTGGCTGGGTACGAG +
Preference number: 4 (lower is better)
Translates to: TGHPGLGTTSRTASGGAVLQGRW*RLAGYE
Trigger: CTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAG...TACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAACGACGAGCAGAACTaGGAGTGGTGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVNDEQN*EWWGGS
Trigger: GCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGGGGGCACACTCGATTaGGCTGCTGCAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAGGTLD*AAAALQ
Trigger: TTGCAGAGCTGCAGCAGCGCAATCGAGTGTGCCCCC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPRPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTCTTCCAGGGCATCTaGAGCCCTGCGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALFQGI*SPALLL
Trigger: GAGGAGAAGCGCAGGGCTGCAGATGCCCTGGAAGAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCGTTCCCGCTTATGCTaGTCCACCAGGCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRSRLC*STRLRV
Trigger: GACCCGAAGCCTGGTGGAGCAGCATAAGCGGGAACG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGGCAGCCATGGCCTCTaGCAGCTCCCGCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTGSHGL*QLPPQD
Trigger: GTCCTGCGGCGGGAGCTGGCAGAGGCCATGGCTGCC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAACTGGCGTCCCTGTTaGTCTTCCAGCCACTCGGGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWANWRPC*SSSHSG
Trigger: GCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTAGCCACTCCTGAGTaGCCTTGCTGTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLATPE*PCCAPP
Trigger: CGGAGGAGCACAGCAAGGCCACTCAGGAGTGGCTAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCACCTCGCCCTTCTCCTaGGGTGGGTTATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWATSPFS*GGLSCS
Trigger: GCTGCAGGATAACCCACCCCAGGAGAAGGGCGAGGT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGACCTCGCCCTTCTCCTaGGGTGGGTTATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVTSPFS*GGLSCS
Trigger: GCTGCAGGATAACCCACCCCAGGAGAAGGGCGAGGT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGGGCCTGGAGGCGCTaGGCCTCCTGCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGWAWRR*ASCWLS
Trigger: CGAGAGCCAGCAGGAGGCCCAGCGCCTCCAGGCCCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGCAGTTCATTCAGCTaGGCCTGGAGGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDCSSFS*AWRRWA
Trigger: GGCCCAGCGCCTCCAGGCCCAGCTGAATGAACTGCA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGCTGCTGGTCTGCATaGGCAACCTGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSCWSA*ATCASR
Trigger: CCTGGAGGCACAGGTTGCCCATGCAGACCAGCAGCT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVAGDTE*GPLLAA
Trigger: AGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGAAGCTGTTCCTTCCTaGAGGGGCCCCACTGGACAC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVEAVPS*RGPTGH
Trigger: GTGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGGATTGGCTGCATGCTaGCTCGGCGCAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAGLAAC*LGAGSL
Trigger: AAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGGGAGTCATGGGGCGTaGGAAACAGCTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVGSHGA*ETAGGL
Trigger: AAGGCCACCAGCTGTTTCCCACGCCCCATGACTCCC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGCTGGCTGTGGTGGTaGCAATGCGCGGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRWLWW*QCAENG
Trigger: GCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGAGGGGTGGCACCAATaGCGGCAGCAGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGEGWHQ*RQQWRR
Trigger: GCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCTTGGCTCGAGGGGTaGCACCAATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPWLEG*HQWRQQ
Trigger: CTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCCAGTTGCTGGGCATaGTCCTGCCTAGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAASCWA*SCLVAS
Trigger: GGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGTGCATCCTTCTCGGTaGGGAGCTTGCGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAVHPSR*GACGSQ
Trigger: CTGAGAACCGCAAGCTCCTCACCGAGAAGGATGCAC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTGTAGCTGCTGCAGATaGCTGGCAAACTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVCSCCR*LANSRS
Trigger: GCTGCGGGAGTTTGCCAGTCATCTGCAGCAGCTACA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCCTCCGTCAGCTCATTaGGGGCATCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAPPSAH*GHPVAA
Trigger: AGCAGCTACAGGATGCCCTCAATGAGCTGACGGAGG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGGCGAGCTAGAGACTaGGTAGAGGAGGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRRARD*VEEVAR
Trigger: GCGAGCCACCTCCTCTACTCAGTCTCTAGCTCGCCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCATCTCCTCATCTGTaGTGGTGCCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSSPHL*WCPGSG
Trigger: CCCTGAGCCTGGGCACCATCACAGATGAGGAGATGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCTGCTGCCGGGTGGTaGTGCCAGTGCCCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAAAGW*CQCPRL
Trigger: TAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPRRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGTCAACCGGGCCCCATaGGCCTGGGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAVNRAP*AWEACS
Trigger: GGAGCAGGCCTCCCAGGCTCATGGGGCCCGGTTGAC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTGGGCCTGTGTCACTaGGGTCTGGGCACTGTCCCG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLGLCH*GLGTVP
Trigger: CGGGACAGTGCCCAGACCTCAGTGACACAGGCCCAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACACTTCAGTCTCAGCCTaGTGGGCCTCCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDTSVSA*WASPSC
Trigger: GCAGCTTGGGGAGGCCCATCAGGCTGAGACTGAAGT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCTGCCGCAGGTTCTCTaGAGCCACCCGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDLPQVL*SHPLFL
Trigger: GAGAAACAGCGGGTGGCTTCAGAGAACCTGCGGCAG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATCTGCCCGCAGCTGCTaGGCTGTTCGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSARSC*AVRSCS
Trigger: AGAGCAGGAGCGAACAGCTCAGCAGCTGCGGGCAGA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGGGCTAGGCGGTCAATaGGCTGCTGCATCATGGCTA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAGLGGQ*AAASWL
Trigger: TAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGTCTTCAGCCCAGCCTaGTGTAGCTCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDVFSPA*CSSWPS
Trigger: GCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGAC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCGAAGCTGCTGGTCTaGATGGGCAACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSKLLV*MGNLCL
Trigger: GAGGCACAGGTTGCCCATGCAGACCAGCAGCTTCGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCGCTGCTGCAGCTCTaGAATGCGGTTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAALLQL*NAVPVI
Trigger: GATGACTGGAACCGCATTGCAGAGCTGCAGCAGCGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCACACTCGATTGCGCTaGTGCAGCTCTGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAHTRLR*CSSAMR
Trigger: CCGCATTGCAGAGCTGCAGCAGCGCAATCGAGTGTG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCACACTCGATTGCGCTaGTGCAGCTCTGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVHTRLR*CSSAMR
Trigger: CCGCATTGCAGAGCTGCAGCAGCGCAATCGAGTGTG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGTGGTGGTGGCAATaGGCGGAGAACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGLWWWQ*AENGGF
Trigger: GAACCCGCCGTTCTCCGCGCATTGCCACCACCACAG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLRPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGRPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCGTTCCCGCTTATGCTaGTCCACCAGGCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRSRLC*STRLRV
Trigger: GACCCGAAGCCTGGTGGAGCAGCATAAGCGGGAACG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAACTGGCGTCCCTGTTaGTCTTCCAGCCACTCGGGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDNWRPC*SSSHSG
Trigger: GCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCATTGCCCATCTGCTCTaGCTCCCGCTCCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAIAHLL*LPLHSL
Trigger: CAGGCTATGGAGCGGGAGGCAGAGCAGATGGGCAAT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCCACCTCCCTTTCCTaGTGCCCACGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPATSLS*CPRSSC
Trigger: GCAGGAGGAGCGTGGGCAGCAGGAAAGGGAGGTGGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCAGGGCATGAGCCAGTaGCTCTTGCAGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVQGMSQ*LLQGSE
Trigger: TTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTGTTGGCTCTGTCCTaGCAGCAGCCTCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLLALS*QQPQIG
Trigger: CCCAATCTGAGGCTGCTGGCAGGACAGAGCCAACAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCTCAGCCTCGAGGCTaGGTTCCAGGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAQPRG*VPGCQP
Trigger: AGGCTGACAGCCTGGAACGCAGCCTCGAGGCTGAGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTTCCTCTCAGCCTCTTaGCGGCCCCGGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTFLSAS*RPRATW
Trigger: CCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGTGAGGTCAGCTCCTaGCGCAGGTTCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWACEVSS*RRFSEA
Trigger: GGCTTCAGAGAACCTGCGGCAGGAGCTGACCTCACA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTGGTGTGCTCGAGCTaGAGGGTGGAGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLVCSS*RVERAC
Trigger: GCAGGCCCTCTCCACCCTGCAGCTCGAGCACACCAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTACCGGGCAGTGCTCTGTaGTTCTCGCTGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: TGHPGLGTTSRTASGGAVPGSAL*FSLHLS
Trigger: GCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGG...TACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAAGATGCTGCAGTCCTaGAGCTGCAGCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAKMLQS*SCSTAS
Trigger: GGAGGCTGTGCTGCAGCTCCAGGACTGCAGCATCTT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTCCTTGGGCTCCAGTaGGCTGGCCGCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLLGLQ*AGRLLL
Trigger: GAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGGGCCTGGAGGCGCTaGGCCTCCTGCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEWAWRR*ASCWLS
Trigger: CGAGAGCCAGCAGGAGGCCCAGCGCCTCCAGGCCCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCCAGGCTGCGCACCTaGGCAGTAAGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSRLRT*AVRWRQ
Trigger: CTGCCGCCACCTTACTGCCCAGGTGCGCAGCCTGGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGTGGCTCGCAGGCTAGCCTGGGAAGCAGGAGCAGACCGCGTGCTGTAGAACGATCCAGGCTGCGCACCTaGGCAGTAAGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GGSQASLGSRSRPRAVERSRLRT*AVRWRQ
Trigger: CTGCCGCCACCTTACTGCCCAGGTGCGCAGCCTGGA...TCGTTCTACAGCACGCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGLVPSG*VRGSLL
Trigger: CAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGTTCTCCAGGGACGCTaGTGCCGTCTGGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGVLQGR*CRLAGY
Trigger: GTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAAC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAGGGATTCTACCTTaGGGGGCAGGCGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPGILP*GAGAGR
Trigger: TCTCCCAGCGCCTGCCCCCCAAGGTAGAATCCCTGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGGACACCCCGGCCTaGGAACGACGAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGLDTPA*ERRAEL
Trigger: CAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCAGGTCTTCAGATGTaGGGGGCACACTCGATTGCG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVAGLQM*GAHSIA
Trigger: CGCAATCGAGTGTGCCCCCCACATCTGAAGACCTGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCGGCGCAGGGTCTCTTaGGGGTCTCCAGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWARRRVS*GSPVFI
Trigger: GATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCTCGGCTATCTGGATTaGCTGCATGCTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDLGYLD*LHAGSA
Trigger: CGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGTGCCCTCGGCTATCTaGATTGGCTGCATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVVPSAI*IGCMLA
Trigger: AGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCAC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGAGTTCCAGGGCCCTaGTGGGGCTCTAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGVPGP*WGSRET
Trigger: GGTCTCCCTAGAGCCCCACCAGGGCCCTGGAACTCC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGGTCTCGGGGAGTCATaGGGCGTGGGAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGGLGES*GVGNSW
Trigger: CCAGCTGTTTCCCACGCCCCATGACTCCCCGAGACC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACGCTGGCTGTGGTGGTaGCAATGCGCGGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPRWLWW*QCAENG
Trigger: GCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGGCGGCGCTGGCTGTaGTGGTGGCAATGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGWRRWL*WWQCAE
Trigger: CTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGAGGGGTGGCACCAATaGCGGCAGCAGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAEGWHQ*RQQWRR
Trigger: GCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGGTCAGACCCAGTCCTaGACTTCAAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVGQTQS*TSRVRA
Trigger: GGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGAATTAGTTTCCACCTaGCTGCGCGCTCCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAELVST*LRAPAL
Trigger: CAGAGCGGGAGCGCGCAGCCAGGTGGAAACTAATTC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGCCAGTTGCTGGGCATaGTCCTGCCTAGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDASCWA*SCLVAS
Trigger: GGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTGTGTCACTGAGGTCTaGGCACTGTCCCGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVCVTEV*ALSRAS
Trigger: TGAAGCCCGGGACAGTGCCCAGACCTCAGTGACACA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGTCTCAACACAGGCCTaGAGTTCCTCCACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVVSTQA*SSSTFR
Trigger: CCGGAAGGTGGAGGAACTCCAGGCCTGTGTTGAGAC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAGCTGCTCCTGGAGCTaGTCCTTCTCCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSCSWS*SFSWAT
Trigger: GGTGGCCCAGGAGAAGGACCAGCTCCAGGAGCAGCT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGCAAGGTCAGCCTaGGCACGGCCCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGRARSA*ARPRSW
Trigger: CCAGGAGCGGGGCCGTGCCCAGGCTGACCTTGCCCT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCTCAAGCTCTGCTCTaGCCGCCTTCTCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASQALL*PPSPGQ
Trigger: TTGCCCTGGAGAAGGCGGCCAGAGCAGAGCTTGAGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACGGCCCCGGGCCACCTaGGCCTTCCACTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPRPRAT*AFHSSS
Trigger: TGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCCTGGCGATTCAGGATaGACACCTCCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAPGDSG*TPPPPS
Trigger: GCTTGGAGGAGGAGGTGTCCATCCTGAATCGCCAGG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTCTGGCACTGTTGCTaGCTGTCTCTGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALWHCC*LSLPAA
Trigger: TGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTACTGCCGGCCAAGGTTaGCCCGCTCACCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKATAGQG*PAHPAP
Trigger: GGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGACTGCCGGCCAAGGTTaGCCCGCTCACCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAETAGQG*PAHPAP
Trigger: GGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCACGGCTGCCAACTCTTaGACATACTTCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWATAANS*TYFSRA
Trigger: GGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCGCTGGGAGATAGGTaGGGCTGGTTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPALGDR*GWFSRD
Trigger: GTCCCTGGAGAACCAGCCTCACCTATCTCCCAGCGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCAAGCTGAGCAGGGCTaGGTTGCCATAATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVQAEQG*VAIIGR
Trigger: TCTCCCGATTATGGCAACTCAGCCCTGCTCAGCTTG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCTGCTGCCGGGTGGTaGTGCCAGTGCCCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEAAAGW*CQCPRL
Trigger: TAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCTGCTGCCGGGTGGTaGTGCCAGTGCCCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAAAGW*CQCPRL
Trigger: TAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTRRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGTGTGAGCTGCTGCTaGAGGCTGTCCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLGVSCC*RLSPNP
Trigger: GGGGTTGGGGGACAGCCTTCAGCAGCAGCTCACACC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGGTGTGAGCTGCTGCTaGAGGCTGTCCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGGVSCC*RLSPNP
Trigger: GGGGTTGGGGGACAGCCTTCAGCAGCAGCTCACACC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGGCCAGCCAGTTCTTaGTCCTGTTGCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRPASS*SCCWMV
Trigger: CACCATCCAGCAACAGGATCAAGAACTGGCTGGCCT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGTGCCTCCAGCTGCTTaGGAGCCGCATCCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRVPPAA*EPHPAP
Trigger: GGGAGCGGGATGCGGCTCTCAAGCAGCTGGAGGCAC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGAGGCTAAGGCACTCTaGCTGTGCCCTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGEAKAL*LCPSSW
Trigger: CCAGGAGCTAGGGCACAGTCAGAGTGCCTTAGCCTC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCTCCTCCAGGACCTTaGCCTTGGCACCCTCATACT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSPPGP*PWHPHT
Trigger: AGTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGGCATTTCTTGTCCTaGAGGGCTGCGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRHFLS*RAALSS
Trigger: GGAGCTCAGCGCAGCCCTGCAGGACAAGAAATGCCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATCCAGGCTCCGCAGCTaGTCCTGCAGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSRLRS*SCSSWF
Trigger: GAACCAAGAGCTGCAGGAGCAGCTGCGGAGCCTGGA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCGAAGCTGCTGGTCTaGATGGGCAACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSKLLV*MGNLCL
Trigger: GAGGCACAGGTTGCCCATGCAGACCAGCAGCTTCGA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCTCCAGGGACGCTGGTaGCGTCTGGCTGGGTACGAG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGLQGRW*RLAGYE
Trigger: CTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGCGCTGCTGCAGCTCTaGAATGCGGTTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDALLQL*NAVPVI
Trigger: GATGACTGGAACCGCATTGCAGAGCTGCAGCAGCGC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGACTCGATTGCGCTGCTaGAGCTCTGCAATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVTRLRC*SSAMRF
Trigger: GAACCGCATTGCAGAGCTGCAGCAGCGCAATCGAGT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAACCCGTTTGCGCTGCTaGCGGGTGGTGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPTRLRC*RVVMPV
Trigger: CACTGGCATCACCACCCGGCAGCAGCGCAAACGGGT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAERPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTGCTTCTCTTTGGCCTaGTGCTTCAGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVCFSLA*CFRPAS
Trigger: ACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAAGCA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGATGGTCCTGCCTAGTTaGCTCCTGCTTCTCCGCTAC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVMVLPS*LLLLRY
Trigger: GTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCAT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTGGGCCTGGGCCTCATaGTGTTCCTGGCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTWAWAS*CSWRAV
Trigger: GACAGCCCGCCAGGAACAGCATGAGGCCCAGGCCCA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCTAGTTCGTTCTGCTaGCGGCTTATCTGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVASSFC*RLIWSS
Trigger: CGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCGCATCTCAAGCTCTaGTCTGGCCGCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPHLKL*SGRLLQ
Trigger: CTGGAGAAGGCGGCCAGAGCAGAGCTTGAGATGCGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCGTTGAGGGCGTTCTaGAGCCGCATCTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASLRAF*SRISSS
Trigger: AGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCCTCTAACTGGCCCTaGAGAGTCTCCAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSSNWP*RVSRAL
Trigger: CAGTGCTCTGGAGACTCTGCAGGGCCAGTTAGAGGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGCAGAGCTGCGTTCTaGAGCTCTGGCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSRAAF*SSGTVA
Trigger: AGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCGGCCTGCTCGGCCTaGAGCTGCTGGCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAACSA*SCWQRC
Trigger: GCACCTCTGCCAGCAGCTGCAGGCCGAGCAGGCCGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTCTCGGCAGCGGCCTaGTCGGCCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAFSAAA*SACSCW
Trigger: CCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTTCTCGGCAGCGGCCTaGTCGGCCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEFSAAA*SACSCW
Trigger: CCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTTCTCGGCAGCGGCCTaGTCGGCCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGFSAAA*SACSCW
Trigger: CCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGCGGCCTGCTTGCTCTaGTCCAGCTCCTCACGGTGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTAACLL*SSSSRW
Trigger: CCACCGTGAGGAGCTGGAGCAGAGCAAGCAGGCCGC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGTTCGCTCCTGCTCTaGCACCTTCTGCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGCSLLL*HLLPQR
Trigger: CCTCTGCGGCAGAAGGTGGCAGAGCAGGAGCGAACA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCTGTGCTTCTCGCTaGACCTCAGCCAGACGGGTC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGLCASR*TSARRV
Trigger: GACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCTTCCTGGAACCGCTaGCTCTCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSSWNR*LSSRTL
Trigger: CAAGGTCCTGGAGGAGAGGCAGCGGTTCCAGGAAGA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCTCCAATGCGCCTCCTaGTGGAAGCCTCCACACACT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDLQCAS*WKPPHT
Trigger: AGTGTGTGGAGGCTTCCACCAGGAGGCGCATTGGAG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351960.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGGGCTCCAGTGGGCTaGCCGCCTGCTTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGWAPVG*PPASHS
Trigger: TGAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTAGCCACTCCTGAGTaGCCTTGCTGTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGLATPE*PCCAPP
Trigger: CGGAGGAGCACAGCAAGGCCACTCAGGAGTGGCTAG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGGGCCTGGAGGCGCTaGGCCTCCTGCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSWAWRR*ASCWLS
Trigger: CGAGAGCCAGCAGGAGGCCCAGCGCCTCCAGGCCCA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGGGCCTGGAGGCGCTaGGCCTCCTGCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLWAWRR*ASCWLS
Trigger: CGAGAGCCAGCAGGAGGCCCAGCGCCTCCAGGCCCA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGCCTGCTGTAGCTCATaGCCCAGCCGTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDACCSS*PSRSAS
Trigger: TGAAGCTGAACGGCTGGGCCATGAGCTACAGCAGGC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCTGTTCAGCCTCCTTaGTCTTCAGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSVQPP*SSAQPA
Trigger: AGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAACCTGGGCAGTAAGGTaGCGGCAGGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGTWAVR*RQVCSA
Trigger: GGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGGTCTCGAAGCTGCTaGTCTGCATGGGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWARSRSC*SAWATC
Trigger: ACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTGGGGCTTAGCCTaGGGCTCACGGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASWGLA*GSRLFK
Trigger: TTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVILKSS*GLAWGS
Trigger: TGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTAT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGTGGCTCGCAGGCTAGCCTGGGAAGCAGGAGCAGACCGCGTGCTGTAGAACGAGACGCTGGTGCCGTCTaGCTGGGTACGAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GGSQASLGSRSRPRAVERDAGAV*LGTRQL
Trigger: AAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTC...TCGTTCTACAGCACGCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCTCGCAGGCTAGCCTaGGAAGCAGGAGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLARRLA*EAGADR
Trigger: GCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACAGAACTGCGAGTGGTaGGGCGGTAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPQNCEW*GGSQAS
Trigger: GCTTGCCTGGCTACCGCCCCACCACTCGCAGTTCTG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTGGACACCCCGGCCTaGGAACGACGAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLDTPA*ERRAEL
Trigger: CAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCGGCGCAGGGTCTCTTaGGGGTCTCCAGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRRRVS*GSPVFI
Trigger: GATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGGATTGGCTGCATGCTaGCTCGGCGCAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGGLAAC*LGAGSL
Trigger: AAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGGAGTTCCAGGGCCCTaGTGGGGCTCTAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGGVPGP*WGSRET
Trigger: GGTCTCCCTAGAGCCCCACCAGGGCCCTGGAACTCC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCGCTGGCTGTGGTGGTaGCAATGCGCGGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTRWLWW*QCAENG
Trigger: GCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCGGCGCTGGCTGTGGTaGTGGCAATGCGCGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTRRWLW*WQCAEN
Trigger: GTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGGCGGCGCTGGCTGTaGTGGTGGCAATGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRWRRWL*WWQCAE
Trigger: CTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAGCAGTGGCGGCGCTaGCTGTGGTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTQQWRR*LWWWQC
Trigger: GCATTGCCACCACCACAGCCAGCGCCGCCACTGCTG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGAGGGGTGGCACCAATaGCGGCAGCAGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSEGWHQ*RQQWRR
Trigger: GCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCCTTGGCTCGAGGGGTaGCACCAATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLPWLEG*HQWRQQ
Trigger: CTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGGTGGGGCCACTCACTaGTACTGGCCCTTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDGGATH*YWPFSA
Trigger: AGCACTAAAGGGCCAGTACCAGTGAGTGGCCCCACC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGTCAGAGAGGCCACCTaGGCAGTCAACCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTVREAT*AVNRAP
Trigger: TGGGGCCCGGTTGACTGCCCAGGTGGCCTCTCTGAC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGTGGCGGAGGCCCTaGGAGGCCTGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWWRRP*EACSCC
Trigger: ACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGTGTCACTGAGGTCTaGGCACTGTCCCGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDCVTEV*ALSRAS
Trigger: TGAAGCCCGGGACAGTGCCCAGACCTCAGTGACACA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCTGTTCCTGGAACATaGCGCCATACTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAAVPGT*RHTVPP
Trigger: AGGAGGCACAGTATGGCGCCATGTTCCAGGAACAGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGATCTGGAGCTCGCTGTaGGATTCTATGCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVIWSSL*DSMPAT
Trigger: GGTGGCAGGCATAGAATCCCACAGCGAGCTCCAGAT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTGGCCAGGTTGGCATaGAGCTCAGCTAGTTCGTTC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLARLA*SSASSF
Trigger: GAACGAACTAGCTGAGCTCCATGCCAACCTGGCCAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCCTGGCGATTCAGGATaGACACCTCCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDPGDSG*TPPPPS
Trigger: GCTTGGAGGAGGAGGTGTCCATCCTGAATCGCCAGG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCCAGGGCCTGTGTGCTaGTGTGCTCGAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGPGPVC*CARAAG
Trigger: CCCTGCAGCTCGAGCACACCAGCACACAGGCCCTGG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCTGCTCTGCATAGCTaGCCTTCTCTGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAALHS*PSLPAA
Trigger: AGCTGCGGGCAGAGAAGGCCAGCTATGCAGAGCAGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGCCCAACTGCCGGCCAAGGTTaGCCCGCTCACCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PPSHERGHNPMSSCLASPTAGQG*PAHPAP
Trigger: GGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGT...TGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTACTTCTCCCGGGCCTaGTCCAACTCCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVYFSRA*SNSTSR
Trigger: TCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAATCGTACCTCTTCGTaGGCTCGCGCCAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGNRTSS*ARASAV
Trigger: CACAGCGCTGGCGCGAGCCCACGAAGAGGTACGATT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393695.8
ENST00000613205.4
CDS-3UTR CCA 90 bp CGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGGGAGCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: RRAERVLRPESRKTSPRELVPSG*VRGSLL
Trigger: TAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAG...CTCCCTGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp TGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCACCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: CADERSGSYDPSPGRRLPPGDTE*GPLLAA
Trigger: AGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGG...TGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGCGCTGCCCTCTGATTaGCCTCTGTCGGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSALPSD*PLSAGP
Trigger: GGGCCCCGCCGACAGAGGCCAATCAGAGGGCAGCGC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613205.4
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCTCCGTCAGCTCATTaGGGGCATCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPPSAH*GHPVAA
Trigger: AGCAGCTACAGGATGCCCTCAATGAGCTGACGGAGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGCGCTGGGAGATAGGTaGGGCTGGTTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTALGDR*GWFSRD
Trigger: GTCCCTGGAGAACCAGCCTCACCTATCTCCCAGCGC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGTGCTGTAGAACGATaGGTTGGCGCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRAVER*VGAVWL
Trigger: GAGCCAGACAGCGCCAACTCATCGTTCTACAGCACG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAAGCTGAGCAGGGCTaGGTTGCCATAATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDQAEQG*VAIIGR
Trigger: TCTCCCGATTATGGCAACTCAGCCCTGCTCAGCTTG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGGTGTGAGCTGCTGCTaGAGGCTGTCCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEGVSCC*RLSPNP
Trigger: GGGGTTGGGGGACAGCCTTCAGCAGCAGCTCACACC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTGGGCCTGTGTCACTaGGGTCTGGGCACTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLGLCH*GLGTVP
Trigger: CGGGACAGTGCCCAGACCTCAGTGACACAGGCCCAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGGCAGCTACTTCTTTaGCGAGCTGCTCACACTCAC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRQLLL*RAAHTH
Trigger: GTGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAAGCTTCTGGGCCCTaGCTTCCTTCTCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDQASGP*LPSLGP
Trigger: AGGTCCAAGAGAAGGAAGTCAGGGCCCAGAAGCTTG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCACACGCTGCTCGTTaGGGGCGTTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPHAAR*GRSAAA
Trigger: TGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCGCACGCTCAGCCTGTaGGGTCAGCTCCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSRTLSL*GQLLPQ
Trigger: CTGCGGCAGGAGCTGACCTCACAGGCTGAGCGTGCG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCGCACGCTCAGCCTGTaGGGTCAGCTCCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQRTLSL*GQLLPQ
Trigger: CTGCGGCAGGAGCTGACCTCACAGGCTGAGCGTGCG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCTGCCCGCAGCTGCTaGGCTGTTCGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSARSC*AVRSCS
Trigger: AGAGCAGGAGCGAACAGCTCAGCAGCTGCGGGCAGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCTCGCGCTGCCCTCTaGTTGGCCTCTGTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPRAAL*LASVGG
Trigger: CCCGCCGACAGAGGCCAATCAGAGGGCAGCGCGAGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613205.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALSDTG*FKICCP
Trigger: GGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCGGTCAATGCGCTGCTaGATCATGGCTATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRSMRC*IMAICA
Trigger: TGCACAGATAGCCATGATGCAGCAGCGCATTGACCG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGGCGGTCAATGCGCTaGTGCATCATGGCTATCTGT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRRSMR*CIMAIC
Trigger: ACAGATAGCCATGATGCAGCAGCGCATTGACCGCCT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGGGCTAGGCGGTCAATaGGCTGCTGCATCATGGCTA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGGLGGQ*AAASWL
Trigger: TAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAGTGGGCTGGCCGCCTaGTTCTCATTCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSGLAA*FSFSRA
Trigger: AGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCTGCTGCTGCACCTTaGTGGCTTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSAAAP*WLGQSQ
Trigger: CTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTCCGCAGCTGCTCCTaGAGCTCTTGGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLRSCS*SSWFCC
Trigger: GCAGCAGAACCAAGAGCTGCAGGAGCAGCTGCGGAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGTGGCTCGCAGGCTAGCCTGGGAAGCAGGAGCAGACCGCGTGCTGTAGAACGAGTCTTCAGCCCAGCCTaGTGTAGCTCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGSQASLGSRSRPRAVERVFSPA*CSSWPS
Trigger: GCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGAC...TCGTTCTACAGCACGCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGTCTTCAGCCCAGCCTaGTGTAGCTCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPVFSPA*CSSWPS
Trigger: GCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGAC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTCCAGGGACGCTGGTaGCGTCTGGCTGGGTACGAG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKALQGRW*RLAGYE
Trigger: CTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTCCAGGGACGCTGGTaGCGTCTGGCTGGGTACGAG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLQGRW*RLAGYE
Trigger: CTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAACGACGAGCAGAACTaGGAGTGGTGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPNDEQN*EWWGGS
Trigger: GCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAAHPGK*PCRSCS
Trigger: GGAACAGCTTCTACATGGGCACTTGCCAGGATGAGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTTCCAGTCATCCAGCTaGTCAGGCTCATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVFQSSS*SGSSWQ
Trigger: TTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACACACTCGATTGCGCTaGTGCAGCTCTGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGHTRLR*CSSAMR
Trigger: CCGCATTGCAGAGCTGCAGCAGCGCAATCGAGTGTG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCACCCGTTTGCGCTGCTaGCGGGTGGTGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTTRLRC*RVVMPV
Trigger: CACTGGCATCACCACCCGGCAGCAGCGCAAACGGGT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGAGACCCGTTTGCGCTaGTGCCGGGTGGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTETRLR*CRVVMP
Trigger: TGGCATCACCACCCGGCAGCAGCGCAAACGGGTCTC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGAGACCCGTTTGCGCTaGTGCCGGGTGGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLETRLR*CRVVMP
Trigger: TGGCATCACCACCCGGCAGCAGCGCAAACGGGTCTC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTGTGGTGGTGGCAATaGGCGGAGAACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLWWWQ*AENGGF
Trigger: GAACCCGCCGTTCTCCGCGCATTGCCACCACCACAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGGCCCTTTAGTGCTTTaGCTTGCCCTTGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGGPLVL*LALGSR
Trigger: CCTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSRPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAAGAGTGAGGGCCCCTaGTGGGCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRKSEGP*WAQPPG
Trigger: TCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAAGAGTGAGGGCCCCTaGTGGGCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEKSEGP*WAQPPG
Trigger: TCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAAGAGTGAGGGCCCCTaGTGGGCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGKSEGP*WAQPPG
Trigger: TCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAAGAGTGAGGGCCCCTaGTGGGCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAKSEGP*WAQPPG
Trigger: TCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGAGCTGTGTGTTGTTTaGAGCAAGAGTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVELCVV*SKSGCL
Trigger: GAGGCAGCCACTCTTGCTGCAAACAACACACAGCTC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAGCAGCTTGGCTTCCTaGTGGCCTCGCTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSSLAS*WPRSVS
Trigger: GGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCTACCTCCTTCAACTaGTGCTCCTTCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVATSFN*CSFCFR
Trigger: CCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGTAGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGGGCCTGGGCCTCATaGTGTTCCTGGCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGWAWAS*CSWRAV
Trigger: GACAGCCCGCCAGGAACAGCATGAGGCCCAGGCCCA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGAGATACAACGCTGCTaGTCTTCCAGGGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVEIQRC*SSRASA
Trigger: TGCAGATGCCCTGGAAGAGCAGCAGCGTTGTATCTC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCAGGCTTCGGGTCTCTaGCTTCAGCTCAGAGATACA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVQASGL*LQLRDT
Trigger: TGTATCTCTGAGCTGAAGGCAGAGACCCGAAGCCTG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTTTCGTTCCCGCTTATaGTGCTCCACCAGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDFRSRL*CSTRLR
Trigger: CCGAAGCCTGGTGGAGCAGCATAAGCGGGAACGAAA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGGCCTCCCCAAGCTaGTGTAATCGAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWASPS*CNRASS
Trigger: GCTGGAGGCTCGATTACAGCAGCTTGGGGAGGCCCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTACTGTGCCTCCTCTTaGTGGCTATCCTCATACCGC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAYCASS*WLSSYR
Trigger: GCGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCATGGCGCCATACTGTaGCTCCTCTTGCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDHGAIL*LLLLAI
Trigger: GATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCGCTGTGGGATTCTATaGCTGCCACCTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRCGIL*LPPSPL
Trigger: CAAAGGAGAAGGTGGCAGGCATAGAATCCCACAGCG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCGCTGCCTGTGTGCTaGAGAACTGGCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPALPVC*RTGVPV
Trigger: AACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGCAGCGCTGCCTGTGTaGTGCAGAACTGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTAALPV*CRTGVP
Trigger: AGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCCCGCTCCATAGCCTaGAGCGCTGCCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSRSIA*SAACVL
Trigger: CAGCACACAGGCAGCGCTGCAGGCTATGGAGCGGGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCGCTCCTCCTGCTGCTaGCCCTGGCTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAERSSCC*PWLSIS
Trigger: GCTGATGGAGAGCCAGGGGCAGCAGCAGGAGGAGCG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCACGCTCCTCCTGCTaGTGCCCCTGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPRSSC*CPWLSI
Trigger: GATGGAGAGCCAGGGGCAGCAGCAGGAGGAGCGTGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCCACCTCCCTTTCCTaGTGCCCACGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGATSLS*CPRSSC
Trigger: GCAGGAGGAGCGTGGGCAGCAGGAAAGGGAGGTGGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCAGCCTGCTCCTGCTaGTTCTGGCATTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSACSC*FWHCCS
Trigger: GGAACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATTCCTCTCAGCCTCTTaGCGGCCCCGGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLFLSAS*RPRATW
Trigger: CCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCCCGCAGAGCAGAGCTaGGTTCTGCAGCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGPAEQS*VLQLWH
Trigger: GTGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTGGTGTGCTCGAGCTaGAGGGTGGAGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAELVCSS*RVERAC
Trigger: GCAGGCCCTCTCCACCCTGCAGCTCGAGCACACCAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCGGCCTGCTCGGCCTaGAGCTGCTGGCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRAACSA*SCWQRC
Trigger: GCACCTCTGCCAGCAGCTGCAGGCCGAGCAGGCCGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCGGCCTGCTTGCTCTaGTCCAGCTCCTCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAACLL*SSSSRW
Trigger: CCACCGTGAGGAGCTGGAGCAGAGCAAGCAGGCCGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGTCCCCCAGCGGCCTaGTTGCTCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSPPAA*LLCSSS
Trigger: GGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGTTCGCTCCTGCTCTaGCACCTTCTGCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCSLLL*HLLPQR
Trigger: CCTCTGCGGCAGAAGGTGGCAGAGCAGGAGCGAACA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCCCCCGGTTCTCCTCTaGCAGCAGGCCATGCGCCTT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAPPVLL*QQAMRL
Trigger: AAGGCGCATGGCCTGCTGGCAGAGGAGAACCGGGGG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCCCCCGGTTCTCCTCTaGCAGCAGGCCATGCGCCTT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEPPVLL*QQAMRL
Trigger: AAGGCGCATGGCCTGCTGGCAGAGGAGAACCGGGGG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCCCCCGGTTCTCCTCTaGCAGCAGGCCATGCGCCTT +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGPPVLL*QQAMRL
Trigger: AAGGCGCATGGCCTGCTGGCAGAGGAGAACCGGGGG...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCCCCGGTTCTCCTCTaGCAGCAGGCCATGCGCCTT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPPVLL*QQAMRL
Trigger: AAGGCGCATGGCCTGCTGGCAGAGGAGAACCGGGGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTCTGTGCTTCTCGCTaGACCTCAGCCAGACGGGTC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLCASR*TSARRV
Trigger: GACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCCAGCTCCCGGGCAGTaGTCTGTGCTTCTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLPAPGQ*SVLLAA
Trigger: TGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTCCTTGGGCTCCAGTaGGCTGGCCGCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKALLGLQ*AGRLLL
Trigger: GAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTCCTTGGGCTCCAGTaGGCTGGCCGCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLLGLQ*AGRLLL
Trigger: GAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTAGCCACTCCTGAGTaGCCTTGCTGTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLATPE*PCCAPP
Trigger: CGGAGGAGCACAGCAAGGCCACTCAGGAGTGGCTAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGGCCTGGAGGCGCTaGGCCTCCTGCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWAWRR*ASCWLS
Trigger: CGAGAGCCAGCAGGAGGCCCAGCGCCTCCAGGCCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGCAGTTCATTCAGCTaGGCCTGGAGGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLCSSFS*AWRRWA
Trigger: GGCCCAGCGCCTCCAGGCCCAGCTGAATGAACTGCA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTGCAGTTCATTCAGCTaGGCCTGGAGGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTCSSFS*AWRRWA
Trigger: GGCCCAGCGCCTCCAGGCCCAGCTGAATGAACTGCA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGCCTGCTGTAGCTCATaGCCCAGCCGTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CADERSGSYDPSPGRRLPACCSS*PSRSAS
Trigger: TGAAGCTGAACGGCTGGGCCATGAGCTACAGCAGGC...TGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCCAGGCTGCGCACCTaGGCAGTAAGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESRLRT*AVRWRQ
Trigger: CTGCCGCCACCTTACTGCCCAGGTGCGCAGCCTGGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCCAGGCTGCGCACCTaGGCAGTAAGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASRLRT*AVRWRQ
Trigger: CTGCCGCCACCTTACTGCCCAGGTGCGCAGCCTGGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGGTCTCGAAGCTGCTaGTCTGCATGGGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRSRSC*SAWATC
Trigger: ACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGCTGGGGCTTAGCCTaGGGCTCACGGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSWGLA*GSRLFK
Trigger: TTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLLVPSG*VRGSLL
Trigger: CAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGACGCTGGTGCCGTCTaGCTGGGTACGAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLDAGAV*LGTRQL
Trigger: AAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCCAGGGATTCTACCTTaGGGGGCAGGCGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGPGILP*GAGAGR
Trigger: TCTCCCAGCGCCTGCCCCCCAAGGTAGAATCCCTGG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGCTCGCAGGCTAGCCTaGGAAGCAGGAGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRARRLA*EAGADR
Trigger: GCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGAAGCTGTTCCTTCCTaGAGGGGCCCCACTGGACAC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPEAVPS*RGPTGH
Trigger: GTGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCAGGTCTTCAGATGTaGGGGGCACACTCGATTGCG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAGLQM*GAHSIA
Trigger: CGCAATCGAGTGTGCCCCCCACATCTGAAGACCTGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGATTGGCTGCATGCTaGCTCGGCGCAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGLAAC*LGAGSL
Trigger: AAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGGTCTCGGGGAGTCATaGGGCGTGGGAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGGLGES*GVGNSW
Trigger: CCAGCTGTTTCCCACGCCCCATGACTCCCCGAGACC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGGTCTCGGGGAGTCATaGGGCGTGGGAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTGLGES*GVGNSW
Trigger: CCAGCTGTTTCCCACGCCCCATGACTCCCCGAGACC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGFHCEC*GKPWTG
Trigger: CCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCGGCGCTGGCTGTGGTaGTGGCAATGCGCGGAGAAC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGRRWLW*WQCAEN
Trigger: GTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCGGCGCTGGCTGTGGTaGTGGCAATGCGCGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKARRWLW*WQCAEN
Trigger: GTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGGCGGCGCTGGCTGTaGTGGTGGCAATGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLWRRWL*WWQCAE
Trigger: CTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCTTGGCTCGAGGGGTaGCACCAATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPWLEG*HQWRQQ
Trigger: CTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCCTTGGCTCGAGGGGTaGCACCAATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRPWLEG*HQWRQQ
Trigger: CTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCTTTGCCTTGCCCTTaGCTCGAGGGGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPALPCP*LEGWHQ
Trigger: TTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGAATTAGTTTCCACCTaGCTGCGCGCTCCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGELVST*LRAPAL
Trigger: CAGAGCGGGAGCGCGCAGCCAGGTGGAAACTAATTC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCCAGCATCTCTACCCTaGCTTGGAGCTGTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVPASLP*LGAVCC
Trigger: ACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGTCAGAGAGGCCACCTaGGCAGTCAACCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAVREAT*AVNRAP
Trigger: TGGGGCCCGGTTGACTGCCCAGGTGGCCTCTCTGAC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCCAGTTGCTGGGCATaGTCCTGCCTAGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPASCWA*SCLVAS
Trigger: GGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCAGTGGCCAGTTGCTaGGCATGGTCCTGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAVASC*AWSCLV
Trigger: AACTAGGCAGGACCATGCCCAGCAACTGGCCACTGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGCAGAATCTCCAGCTTaGCAGCCTTCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAAESPA*QPSPSP
Trigger: TGGAGAAGGAGAAGGCTGCCAAGCTGGAGATTCTGC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGTGTCACTGAGGTCTaGGCACTGTCCCGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGCVTEV*ALSRAS
Trigger: TGAAGCCCGGGACAGTGCCCAGACCTCAGTGACACA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGTGCCTCCTCTTGCTaGCTATCCTCATACCGCTCA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWACASSC*LSSYRS
Trigger: TGAGCGGTATGAGGATAGCCAGCAAGAGGAGGCACA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGGGCCACCTCTTTGCTaGTGGCAGCCATCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDGPPLC*WQPSFP
Trigger: AGGAAAAGATGGCTGCCACCAGCAAAGAGGTGGCCC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAGACCACGAAGCTTaGCCAACTCCTGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPDHEA*PTPGPC
Trigger: GCAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAGCTTGGGGCCTGTTaGCTCTGTCCTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTQLGAC*LCPASS
Trigger: GCTGCTGGCAGGACAGAGCCAACAGGCCCCAAGCTG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGCTCCTGCTGCTTCTaGCATTGCTGTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWACSCCF*HCCSSL
Trigger: CAAGCTGGAACAGCAATGCCAGAAGCAGCAGGAGCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGCCTTCTCCTCTAACTaGCCCTGCAGAGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDAFSSN*PCRVSR
Trigger: TCTGGAGACTCTGCAGGGCCAGTTAGAGGAGAAGGC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCAGCCAACTCCCGTTaGGCCGAGGCTAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAANSR*AEAKAL
Trigger: GAGTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCAGCCAACTCCCGTTaGGCCGAGGCTAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLAANSR*AEAKAL
Trigger: GAGTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCTTCAGCCTTGCTGTaGTCTTGTACCTTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASSALL*SCTLVR
Trigger: CCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCTTCAGCCTTGCTGTaGTCTTGTACCTTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSSALL*SCTLVR
Trigger: CCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCCAGGGCCTGTGTGCTaGTGTGCTCGAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAPGPVC*CARAAG
Trigger: CCCTGCAGCTCGAGCACACCAGCACACAGGCCCTGG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCCAGCTCCTCACGGTaGCGTTTCTCGGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSSSSR*RFSAAA
Trigger: GGCCGCTGCCGAGAAACGCCACCGTGAGGAGCTGGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TGCGCCGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAACGGCTGCCAACTCTTaGACATACTTCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CADERSGSYDPSPGRRLPTAANS*TYFSRA
Trigger: GGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGT...TGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCGGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCGCTGGGAGATAGGTaGGGCTGGTTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAALGDR*GWFSRD
Trigger: GTCCCTGGAGAACCAGCCTCACCTATCTCCCAGCGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAGGCGAGCTAGAGACTaGGTAGAGGAGGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLRRARD*VEEVAR
Trigger: GCGAGCCACCTCCTCTACTCAGTCTCTAGCTCGCCT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGGTAGCCAGGCAAGCTaGGCAGGGCTGAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTGSQAS*AGLSCH
Trigger: ATGGCAACTCAGCCCTGCTCAGCTTGCCTGGCTACC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCTGCTGCCGGGTGGTaGTGCCAGTGCCCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGAAAGW*CQCPRL
Trigger: TAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGGCGGAGGACCAGGTaGGGTCAGCATCGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSRRRTR*GQHRGH
Trigger: GTGTCCCCGATGCTGACCTCACCTGGTCCTCCGCCT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAGGCCAGCCAGTTCTTaGTCCTGTTGCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRPASS*SCCWMV
Trigger: CACCATCCAGCAACAGGATCAAGAACTGGCTGGCCT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGTGCCTCCAGCTGCTTaGGAGCCGCATCCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGVPPAA*EPHPAP
Trigger: GGGAGCGGGATGCGGCTCTCAAGCAGCTGGAGGCAC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCTTCATTAGCCACCTaGAGTTGCTGCTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVASLAT*SCCCRI
Trigger: GATTCTGCAGCAGCAACTTCAGGTGGCTAATGAAGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGGCAGCTACTTCTTTaGCGAGCTGCTCACACTCAC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRQLLL*RAAHTH
Trigger: GTGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACCACACGCTGCTCGTTaGGGGCGTTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLPHAAR*GRSAAA
Trigger: TGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATTTTCCGTCAGGGCATaGGCCAGTGCCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPFSVRA*ASASCR
Trigger: CCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTCAGATTGGGCTCCTaGGCCAGATGCGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLRLGS*ARCVLL
Trigger: AAGGAGCACGCATCTGGCTCAGGAGCCCAATCTGAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGAGGCTAAGGCACTCTaGCTGTGCCCTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGEAKAL*LCPSSW
Trigger: CCAGGAGCTAGGGCACAGTCAGAGTGCCTTAGCCTC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTGCCGCAGGTTCTCTaGAGCCACCCGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLPQVL*SHPLFL
Trigger: GAGAAACAGCGGGTGGCTTCAGAGAACCTGCGGCAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCGCACGCTCAGCCTGTaGGGTCAGCTCCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGRTLSL*GQLLPQ
Trigger: CTGCGGCAGGAGCTGACCTCACAGGCTGAGCGTGCG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCTGCCCGCAGCTGCTaGGCTGTTCGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSARSC*AVRSCS
Trigger: AGAGCAGGAGCGAACAGCTCAGCAGCTGCGGGCAGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGGGAGCTTCCACCTGGGCAGTaGGTTTCTGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RRAERVLRPESRKTSPRELPPGQ*VSASLP
Trigger: AGGAAGAGAGGCAGAAACTCACTGCCCAGGTGGAAG...CTCCCTGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGGCTGCTTCAAGATTTaGTGTCCCTCTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVGCFKI*CPSSVP
Trigger: TGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGGCTAGGCGGTCAATaGGCTGCTGCATCATGGCTA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGLGGQ*AAASWL
Trigger: TAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLIVLS*LLLLAQ
Trigger: TTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALIVLS*LLLLAQ
Trigger: TTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTCCGCAGCTGCTCCTaGAGCTCTTGGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLRSCS*SSWFCC
Trigger: GCAGCAGAACCAAGAGCTGCAGGAGCAGCTGCGGAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCCAGGCTCCGCAGCTaGTCCTGCAGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSRLRS*SCSSWF
Trigger: GAACCAAGAGCTGCAGGAGCAGCTGCGGAGCCTGGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGTCTTCAGCCCAGCCTaGTGTAGCTCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTVFSPA*CSSWPS
Trigger: GCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGAC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGCATGGGCAACCTGTaGCTCCAGGCTGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAECMGNL*LQAAHL
Trigger: CAGGTGCGCAGCCTGGAGGCACAGGTTGCCCATGCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCTCCAGGGACGCTGGTaGCGTCTGGCTGGGTACGAG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQLQGRW*RLAGYE
Trigger: CTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTCCAGGGACGCTGGTaGCGTCTGGCTGGGTACGAG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLQGRW*RLAGYE
Trigger: CTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAACGACGAGCAGAACTaGGAGTGGTGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTNDEQN*EWWGGS
Trigger: GCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCTGCAGCTCTGCAATaGGGTTCCAGTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAAALQ*GSSHPA
Trigger: AGCTGGATGACTGGAACCGCATTGCAGAGCTGCAGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCGCTGCTGCAGCTCTaGAATGCGGTTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPALLQL*NAVPVI
Trigger: GATGACTGGAACCGCATTGCAGAGCTGCAGCAGCGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGGGGGCACACTCGATTaGGCTGCTGCAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTGGTLD*AAAALQ
Trigger: TTGCAGAGCTGCAGCAGCGCAATCGAGTGTGCCCCC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCTGGATTGGCTGCATaGTGGCTCGGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSGLAA*WLGAGS
Trigger: AGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAACGGCGGGTTCCACTaGGAGTGTTGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTNGGFH*ECWGKP
Trigger: AGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGAACGGCGGGTTCCACTaGGAGTGTTGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGNGGFH*ECWGKP
Trigger: AGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTGTGGTGGTGGCAATaGGCGGAGAACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLWWWQ*AENGGF
Trigger: GAACCCGCCGTTCTCCGCGCATTGCCACCACCACAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATTTAGTGCTTTGCCTTaGCCTTGGCTCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGFSALP*PWLEGW
Trigger: CCACCCCTCGAGCCAAGGGCAAGGCAAAGCACTAAA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGAGTGGCTGCCTCTTaGTTCAAGGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRVAAS*FKVSSC
Trigger: GCAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGCAGCAAGAGTGGCTaGCTCTTGCTTCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWACSKSG*LLLQGF
Trigger: GAAACCTTGAAGCAAGAGGCAGCCACTCTTGCTGCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGGCTACTGCTTAGCTaGTCCACCTGGTGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTRLLLS*STWWRR
Trigger: CCTCCGCCACCAGGTGGAGCAGCTAAGCAGTAGCCT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGGCCTCTCGCTCCTCTaGAGCAGTGGCCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGGLSLL*SSGQLL
Trigger: CAGCAACTGGCCACTGCTGCAGAGGAGCGAGAGGCC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCCAGTGCCTCCAGCTaGTTGAGAGCCGCATCCCGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESSASS*LRAASR
Trigger: GCGGGATGCGGCTCTCAAGCAGCTGGAGGCACTGGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTTCTCAGTTGCTTTTTaGTGCTCAGACCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVFSVAF*CSDRSC
Trigger: GCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGGCATCTGCAGCCCTaGGCTTCTCCTCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLGHLQP*ASPLQG
Trigger: GCCTTGAAGAGGAGAAGCGCAGGGCTGCAGATGCCC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCTCTTCCAGGGCATCTaGAGCCCTGCGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLLFQGI*SPALLL
Trigger: GAGGAGAAGCGCAGGGCTGCAGATGCCCTGGAAGAG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGGGCCTCCCCAAGCTaGTGTAATCGAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLWASPS*CNRASS
Trigger: GCTGGAGGCTCGATTACAGCAGCTTGGGGAGGCCCA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCAGCCATGGCCTCTaGCAGCTCCCGCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRGSHGL*QLPPQD
Trigger: GTCCTGCGGCGGGAGCTGGCAGAGGCCATGGCTGCC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTTCTCCTTTGCCTCCTaGAGCTCCTGGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTFSFAS*SSWRAF
Trigger: GAAGGCCCGCCAGGAGCTGCAGGAGGCAAAGGAGAA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCCTTCTCTTGGACCTaGTGGAGTGCTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSFSWT*WSALAR
Trigger: CCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAAGGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCTGCTCACCTGCCTTaGGCACCAAGGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAAHLP*APRSPS
Trigger: GCTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCGGGAGGCTGTTTCCTaGTGCTCACCTGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEREAVS*CSPALR
Trigger: GCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTCCCG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAACTGGCGTCCCTGTTaGTCTTCCAGCCACTCGGGC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLNWRPC*SSSHSG
Trigger: GCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCAGCGCTGCCTGTGTaGTGCAGAACTGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGAALPV*CRTGVP
Trigger: AGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCAGCGCTGCCTGTGTaGTGCAGAACTGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAALPV*CRTGVP
Trigger: AGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCCCGCTCCATAGCCTaGAGCGCTGCCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESRSIA*SAACVL
Trigger: CAGCACACAGGCAGCGCTGCAGGCTATGGAGCGGGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCCGTTCCAGCTCATTaGCCATCTGCTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAVPAH*PSALPP
Trigger: GGGAGGCAGAGCAGATGGGCAATGAGCTGGAACGGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCCGTTCCAGCTCATTaGCCATCTGCTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLAVPAH*PSALPP
Trigger: GGGAGGCAGAGCAGATGGGCAATGAGCTGGAACGGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCCGCATCTCAAGCTCTaGTCTGGCCGCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGPHLKL*SGRLLQ
Trigger: CTGGAGAAGGCGGCCAGAGCAGAGCTTGAGATGCGG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCGAACTCCACACGCTaGTCGTTGAGGGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGANSTR*SLRAFC
Trigger: GCAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAACTCCTGGTCCTTaGCTTCCTTTTCCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPTPGP*LPFPSG
Trigger: CCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGTTGCTTCACGGTTTaGCGAAGTTCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSCFTV*RSSSSS
Trigger: AGAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGTTGCTTCACGGTTTaGCGAAGTTCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASCFTV*RSSSSS
Trigger: AGAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATCAGCCTGCTCCTGCTaGTTCTGGCATTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSACSC*FWHCCS
Trigger: GGAACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCTCAGCCTCGAGGCTaGGTTCCAGGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGAQPRG*VPGCQP
Trigger: AGGCTGACAGCCTGGAACGCAGCCTCGAGGCTGAGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATTCCTCTCAGCCTCTTaGCGGCCCCGGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRFLSAS*RPRATW
Trigger: CCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTTCCTCTCAGCCTCTTaGCGGCCCCGGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGFLSAS*RPRATW
Trigger: CCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAGCAGAGCTGCGTTCTaGAGCTCTGGCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSRAAF*SSGTVA
Trigger: AGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCCCGCAGAGCAGAGCTaGGTTCTGCAGCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAPAEQS*VLQLWH
Trigger: GTGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCCCGCAGAGCAGAGCTaGGTTCTGCAGCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRPAEQS*VLQLWH
Trigger: GTGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCCGCAGAGCAGAGCTaGGTTCTGCAGCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPAEQS*VLQLWH
Trigger: GTGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTGGTGTGCTCGAGCTaGAGGGTGGAGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLVCSS*RVERAC
Trigger: GCAGGCCCTCTCCACCCTGCAGCTCGAGCACACCAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTGGTGTGCTCGAGCTaGAGGGTGGAGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLVCSS*RVERAC
Trigger: GCAGGCCCTCTCCACCCTGCAGCTCGAGCACACCAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCCTGTGTGCTGGTGTaGTCGAGCTGCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGACVLV*SSCRVE
Trigger: CTCCACCCTGCAGCTCGAGCACACCAGCACACAGGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCACCAGGGCCTGTGTaGTGGTGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSPGPV*WCARAA
Trigger: TGCAGCTCGAGCACACCAGCACACAGGCCCTGGTGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTTCTCGGCAGCGGCCTaGTCGGCCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGFSAAA*SACSCW
Trigger: CCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGCGGCCTGCTTGCTCTaGTCCAGCTCCTCACGGTGG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQAACLL*SSSSRW
Trigger: CCACCGTGAGGAGCTGGAGCAGAGCAAGCAGGCCGC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAGTCCCCCAGCGGCCTaGTTGCTCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSPPAA*LLCSSS
Trigger: GGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTAGCGCCTTCTTCAGCATaGTCAGCTGCTCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: TGHPGLGTTSRTASGGAVAPSSA*SAALHS
Trigger: GCTATGCAGAGCAGCTGAGCATGCTGAAGAAGGCGC...TACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCCCCCGGTTCTCCTCTaGCAGCAGGCCATGCGCCTT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSPPVLL*QQAMRL
Trigger: AAGGCGCATGGCCTGCTGGCAGAGGAGAACCGGGGG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCCACTTCCAGAAACTaGCGGCCAAGGTTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSTSRN*RPRLAR
Trigger: GCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCTCTGTGCTTCTCGCTaGACCTCAGCCAGACGGGTC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGLCASR*TSARRV
Trigger: GACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCCGGGCAGTGCTCTGTaGTTCTCGCTGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEPGSAL*FSLHLS
Trigger: GCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCGGGCAGTGCTCTGTaGTTCTCGCTGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPGSAL*FSLHLS
Trigger: GCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCCAGCTCCCGGGCAGTaGTCTGTGCTTCTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGPAPGQ*SVLLAA
Trigger: TGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGG...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCTCATCTGGAACTGTaGGGTCTGCAGGATATCACC +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASHLEL*GLQDIT
Trigger: GGTGATATCCTGCAGACCCCACAGTTCCAGATGAGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCTCATCTGGAACTGTaGGGTCTGCAGGATATCACC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSHLEL*GLQDIT
Trigger: GGTGATATCCTGCAGACCCCACAGTTCCAGATGAGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTCCTTGGGCTCCAGTaGGCTGGCCGCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLLGLQ*AGRLLL
Trigger: GAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTAGCCACTCCTGAGTaGCCTTGCTGTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLATPE*PCCAPP
Trigger: CGGAGGAGCACAGCAAGGCCACTCAGGAGTGGCTAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGGGTTATCCTGCAGCTaGGACAAGTGTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDGLSCS*DKCSSS
Trigger: GCTGGAAGAACACTTGTCCCAGCTGCAGGATAACCC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGACCTCGCCCTTCTCCTaGGGTGGGTTATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGTSPFS*GGLSCS
Trigger: GCTGCAGGATAACCCACCCCAGGAGAAGGGCGAGGT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCAGTTCATTCAGCTaGGCCTGGAGGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCSSFS*AWRRWA
Trigger: GGCCCAGCGCCTCCAGGCCCAGCTGAATGAACTGCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTTGCAGTTCATTCAGCTaGGCCTGGAGGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGCSSFS*AWRRWA
Trigger: GGCCCAGCGCCTCCAGGCCCAGCTGAATGAACTGCA...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCTGCCTGCTCCTTCTaGCTCAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPAACSF*LNWACS
Trigger: ACTGCAAGCCCAGTTGAGCCAGAAGGAGCAGGCAGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCCTGCTGTAGCTCATaGCCCAGCCGTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPACCSS*PSRSAS
Trigger: TGAAGCTGAACGGCTGGGCCATGAGCTACAGCAGGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATCTGTTCAGCCTCCTTaGTCTTCAGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSVQPP*SSAQPA
Trigger: AGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCACCTGGGCAGTAAGGTaGCGGCAGGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTTWAVR*RQVCSA
Trigger: GGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCCAGGCTGCGCACCTaGGCAGTAAGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSRLRT*AVRWRQ
Trigger: CTGCCGCCACCTTACTGCCCAGGTGCGCAGCCTGGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGAGCTGCTGGTCTGCATaGGCAACCTGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSCWSA*ATCASR
Trigger: CCTGGAGGCACAGGTTGCCCATGCAGACCAGCAGCT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAGDTE*GPLLAA
Trigger: AGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLAGDTE*GPLLAA
Trigger: AGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKALVPSG*VRGSLL
Trigger: CAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGACGCTGGTGCCGTCTaGCTGGGTACGAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEDAGAV*LGTRQL
Trigger: AAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGACGCTGGTGCCGTCTaGCTGGGTACGAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRDAGAV*LGTRQL
Trigger: AAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTAGCCAGGTGTAGAACGATGAGTTaGCGCTGTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HPGLGTTSRTASGGAVARCRTMS*RCLALP
Trigger: TGGAAGAGCCAGACAGCGCCAACTCATCGTTCTACA...CCTGGCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCAGAACTGCGAGTGGTaGGGCGGTAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAQNCEW*GGSQAS
Trigger: GCTTGCCTGGCTACCGCCCCACCACTCGCAGTTCTG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCAGAACTGCGAGTGGTaGGGCGGTAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRQNCEW*GGSQAS
Trigger: GCTTGCCTGGCTACCGCCCCACCACTCGCAGTTCTG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGAGCAGAACTGCGAGTaGTGGGGCGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGEQNCE*WGGSQA
Trigger: TGCCTGGCTACCGCCCCACCACTCGCAGTTCTGCTC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCTGGACACCCCGGCCTaGGAACGACGAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGLDTPA*ERRAEL
Trigger: CAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAG...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGAAGCTGTTCCTTCCTaGAGGGGCCCCACTGGACAC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLEAVPS*RGPTGH
Trigger: GTGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACGGCGCAGGGTCTCTTaGGGGTCTCCAGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPRRRVS*GSPVFI
Trigger: GATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGGATTGGCTGCATGCTaGCTCGGCGCAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTGLAAC*LGAGSL
Trigger: AAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCTCGGCTATCTGGATTaGCTGCATGCTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGLGYLD*LHAGSA
Trigger: CGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTCGGCTATCTGGATTaGCTGCATGCTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLGYLD*LHAGSA
Trigger: CGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGAGTTCCAGGGCCCTaGTGGGGCTCTAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSGVPGP*WGSRET
Trigger: GGTCTCCCTAGAGCCCCACCAGGGCCCTGGAACTCC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGGGAGTCATGGGGCGTaGGAAACAGCTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGGSHGA*ETAGGL
Trigger: AAGGCCACCAGCTGTTTCCCACGCCCCATGACTCCC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGGGAGTCATGGGGCGTaGGAAACAGCTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTGSHGA*ETAGGL
Trigger: AAGGCCACCAGCTGTTTCCCACGCCCCATGACTCCC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGGTCTCGGGGAGTCATaGGGCGTGGGAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRGLGES*GVGNSW
Trigger: CCAGCTGTTTCCCACGCCCCATGACTCCCCGAGACC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDGAAFF*ASVVLC
Trigger: ACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTGAAGGCCATCGACTaGCGCCGGTCAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLKAID*RRSACL
Trigger: TAAACAGGCTGACCGGCGCCAGTCGATGGCCTTCAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCGGCGCTGGCTGTGGTaGTGGCAATGCGCGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQRRWLW*WQCAEN
Trigger: GTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACAGCAGTGGCGGCGCTaGCTGTGGTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLQQWRR*LWWWQC
Trigger: GCATTGCCACCACCACAGCCAGCGCCGCCACTGCTG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCAGCAGTGGCGGCGCTaGCTGTGGTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQQQWRR*LWWWQC
Trigger: GCATTGCCACCACCACAGCCAGCGCCGCCACTGCTG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACCTTGGCTCGAGGGGTaGCACCAATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLPWLEG*HQWRQQ
Trigger: CTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGTCAGACCCAGTCCTaGACTTCAAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGQTQS*TSRVRA
Trigger: GGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGAAAGAGCATCCTCTaGCAGGTGCTCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGKSIL*QVLPPG
Trigger: ACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGCTCAGCAAGCAGCTTaGCTTCCTGCTGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTAQQAA*LPAGLA
Trigger: AGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGGTGGCGGAGGCCCTaGGAGGCCTGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAWWRRP*EACSCC
Trigger: ACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCTGCAACCTGGGCCTaGGCCTCATGCTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSATWA*ASCCSW
Trigger: CCAGGAACAGCATGAGGCCCAGGCCCAGGTTGCAGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGACTCTTTGAGGGCCTaGAGCTGCTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLDSLRA*SCSWSW
Trigger: CCAGCTCCAGGAGCAGCTCCAGGCCCTCAAAGAGTC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGACTCTTTGAGGGCCTaGAGCTGCTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTDSLRA*SCSWSW
Trigger: CCAGCTCCAGGAGCAGCTCCAGGCCCTCAAAGAGTC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCCTCCTGCAGCTCCTaGCGGGCCTTCTCACATTCC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAASCSS*RAFSHS
Trigger: GGAATGTGAGAAGGCCCGCCAGGAGCTGCAGGAGGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCCTGCTGGAGTGCTCTaGCCAGGTTGGCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTPAGVL*PGWHGA
Trigger: AGCTCCATGCCAACCTGGCCAGAGCACTCCAGCAGG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACCAGACCACGAAGCTTaGCCAACTCCTGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPPDHEA*PTPGPC
Trigger: GCAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCCTTCTCCTCTAACTaGCCCTGCAGAGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAFSSN*PCRVSR
Trigger: TCTGGAGACTCTGCAGGGCCAGTTAGAGGAGAAGGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTGTGCCCTAGCTCCTaGGCCTTCTCCTCTAACTGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLCPSS*AFSSNW
Trigger: CCAGTTAGAGGAGAAGGCCCAGGAGCTAGGGCACAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACGGCCCCGGGCCACCTaGGCCTTCCACTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLRPRAT*AFHSSS
Trigger: TGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCTCGAGCTGCAGGGTaGAGAGGGCCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLARAAG*RGPALS
Trigger: AGAAAGAGCAGGCCCTCTCCACCCTGCAGCTCGAGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCGGCCTGCAGCTGCTaGCAGAGGTGCTTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASACSC*QRCLAG
Trigger: GCCAGCTAAGCACCTCTGCCAGCAGCTGCAGGCCGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCTCAGTTCTTCCACCTaGGCAGTGAGTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDLSSST*AVSFCL
Trigger: GAGGCAGAAACTCACTGCCCAGGTGGAAGAACTGAG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
3UTR CAA 72 bp GCCAGGGTGCGGGCAGGCATCACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: ARVRAGITVSRG*ATVGLGAERRH
Trigger: GTGCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCGCACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGAAGCTGGAGAACCTaGGAGAAAGTTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRSWRT*EKVVPT
Trigger: AGTGGGAACAACTTTCTCTCAGGTTCTCCAGCTTCT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGTGCATCCTTCTCGGTaGGGAGCTTGCGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLVHPSR*GACGSQ
Trigger: CTGAGAACCGCAAGCTCCTCACCGAGAAGGATGCAC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCTCCGAAAGCTGGTTaGTTTTGCGATCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPPKAG*FCDPSG
Trigger: GCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGTAGCTGCTGCAGATaGCTGGCAAACTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGCSCCR*LANSRS
Trigger: GCTGCGGGAGTTTGCCAGTCATCTGCAGCAGCTACA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCCTCCGTCAGCTCATTaGGGGCATCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGPPSAH*GHPVAA
Trigger: AGCAGCTACAGGATGCCCTCAATGAGCTGACGGAGG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGGCTCTCGCCTCCCTaGGCCTGGACAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRWLSPP*AWTAFS
Trigger: GCTGAAGGCTGTCCAGGCTCAGGGAGGCGAGAGCCA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGCTCTCGCCTCCCTaGGCCTGGACAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWLSPP*AWTAFS
Trigger: GCTGAAGGCTGTCCAGGCTCAGGGAGGCGAGAGCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAGGCGAGCTAGAGACTaGGTAGAGGAGGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRRRARD*VEEVAR
Trigger: GCGAGCCACCTCCTCTACTCAGTCTCTAGCTCGCCT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGGTAGCCAGGCAAGCTaGGCAGGGCTGAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEGSQAS*AGLSCH
Trigger: ATGGCAACTCAGCCCTGCTCAGCTTGCCTGGCTACC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGGTAGCCAGGCAAGCTaGGCAGGGCTGAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAGSQAS*AGLSCH
Trigger: ATGGCAACTCAGCCCTGCTCAGCTTGCCTGGCTACC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGACAGGGCCTTCTTTaGGGCTCCCCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGQGLL*GSPPQK
Trigger: CTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGGTGTGAGCTGCTGCTaGAGGCTGTCCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRGVSCC*RLSPNP
Trigger: GGGGTTGGGGGACAGCCTTCAGCAGCAGCTCACACC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACAAGCTTCTGGGCCCTaGCTTCCTTCTCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPQASGP*LPSLGP
Trigger: AGGTCCAAGAGAAGGAAGTCAGGGCCCAGAAGCTTG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTTTTCCGTCAGGGCATaGGCCAGTGCCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLFSVRA*ASASCR
Trigger: CCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGAGGCTAAGGCACTCTaGCTGTGCCCTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGREAKAL*LCPSSW
Trigger: CCAGGAGCTAGGGCACAGTCAGAGTGCCTTAGCCTC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTTCTGGCTCTTCTCTaGCTCGGCCATCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKALLALL*LGHHQP
Trigger: CGGCTGGTGATGGCCGAGTCAGAGAAGAGCCAGAAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTTCTGGCTCTTCTCTaGCTCGGCCATCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLLALL*LGHHQP
Trigger: CGGCTGGTGATGGCCGAGTCAGAGAAGAGCCAGAAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTTCTGGCTCTTCTCTaGCTCGGCCATCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLLALL*LGHHQP
Trigger: CGGCTGGTGATGGCCGAGTCAGAGAAGAGCCAGAAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCACCCCCATAGATTCTaGCCTTTCGGACTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDHPHRF*PFGLGY
Trigger: ATAACCGAGTCCGAAAGGGCAGAATCTATGGGGGTG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351960.10
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGGTCAATGCGCTGCTaGATCATGGCTATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRSMRC*IMAICA
Trigger: TGCACAGATAGCCATGATGCAGCAGCGCATTGACCG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGCTTCAGGGTTTCATaGAGCCGCATGGTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGCFRVS*SRMVRL
Trigger: GAGCCTTACCATGCGGCTGCATGAAACCCTGAAGCA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGACTCCTGAGTGGCCTTaGTGTGCTCCTCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGTPEWP*CAPPSA
Trigger: AGCTGACGGAGGAGCACAGCAAGGCCACTCAGGAGT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGAGGCATTTCTTGTCCTaGAGGGCTGCGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGRHFLS*RAALSS
Trigger: GGAGCTCAGCGCAGCCCTGCAGGACAAGAAATGCCT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGCTCAACTGGGCTTaGAGTTCATTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWLNWA*SSFSWA
Trigger: GGCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCCAGGCTCCGCAGCTaGTCCTGCAGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSRLRS*SCSSWF
Trigger: GAACCAAGAGCTGCAGGAGCAGCTGCGGAGCCTGGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGTCTTCAGCCCAGCCTaGTGTAGCTCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRVFSPA*CSSWPS
Trigger: GCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGAC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGCATGGGCAACCTGTaGCTCCAGGCTGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSCMGNL*LQAAHL
Trigger: CAGGTGCGCAGCCTGGAGGCACAGGTTGCCCATGCA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGCCCATGCATGGGCAACCTGTaGCTCCAGGCTGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: PPSHERGHNPMSSCLASPCMGNL*LQAAHL
Trigger: CAGGTGCGCAGCCTGGAGGCACAGGTTGCCCATGCA...TGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGCATGGGCAACCTGTaGCTCCAGGCTGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLCMGNL*LQAAHL
Trigger: CAGGTGCGCAGCCTGGAGGCACAGGTTGCCCATGCA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCGAAGCTGCTGGTCTaGATGGGCAACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSKLLV*MGNLCL
Trigger: GAGGCACAGGTTGCCCATGCAGACCAGCAGCTTCGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCGAAGCTGCTGGTCTaGATGGGCAACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSKLLV*MGNLCL
Trigger: GAGGCACAGGTTGCCCATGCAGACCAGCAGCTTCGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLVMLMI*VVRRRA
Trigger: CGCTCGTCGGCGCACCACGCAGATCATCAACATCAC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGVMLMI*VVRRRA
Trigger: CGCTCGTCGGCGCACCACGCAGATCATCAACATCAC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAACGACGAGCAGAACTaGGAGTGGTGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGNDEQN*EWWGGS
Trigger: GCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCACACTCGATTGCGCTaGTGCAGCTCTGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGHTRLR*CSSAMR
Trigger: CCGCATTGCAGAGCTGCAGCAGCGCAATCGAGTGTG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCTGGATTGGCTGCATaGTGGCTCGGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSGLAA*WLGAGS
Trigger: AGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCTGGATTGGCTGCATaGTGGCTCGGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSGLAA*WLGAGS
Trigger: AGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGCTATCTGGATTGGCTaGATGCTGGCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRAIWIG*MLARRR
Trigger: CCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCTATCTGGATTGGCTaGATGCTGGCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGAIWIG*MLARRR
Trigger: CCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAACGGCGGGTTCCACTaGGAGTGTTGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGNGGFH*ECWGKP
Trigger: AGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAACGGCGGGTTCCACTaGGAGTGTTGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKANGGFH*ECWGKP
Trigger: AGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAACGGCGGGTTCCACTaGGAGTGTTGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRNGGFH*ECWGKP
Trigger: AGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTGTGGTGGTGGCAATaGGCGGAGAACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLWWWQ*AENGGF
Trigger: GAACCCGCCGTTCTCCGCGCATTGCCACCACCACAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCTGTGGTGGTGGCAATaGGCGGAGAACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQLWWWQ*AENGGF
Trigger: GAACCCGCCGTTCTCCGCGCATTGCCACCACCACAG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTTTAGTGCTTTaGCTTGCCCTTGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLGPLVL*LALGSR
Trigger: CCTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGGGACCAGGCCAGGGTaGGGGCAGGCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRGTRPG*GQASLS
Trigger: AGACAGTGATGCCTGCCCGCACCCTGGCCTGGTCCC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAAAGAGTGAGGGCCCCTaGTGGGCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRKSEGP*WAQPPG
Trigger: TCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAGCAGCTTGGCTTCCTaGTGGCCTCGCTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASSLAS*WPRSVS
Trigger: GGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAGCAGCTTGGCTTCCTaGTGGCCTCGCTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSSLAS*WPRSVS
Trigger: GGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAGGCTAGACAGCTGCTaGTTTTCTTCTTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVRLDSC*FSSSKW
Trigger: CCACTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGGAGGCCTGTTCTTaGTGTTGGAGGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWEACS*CWRVCA
Trigger: AGCACAGACCCTCCAACAGCAAGAACAGGCCTCCCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAGGCTACTGCTTAGCTaGTCCACCTGGTGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKARLLLS*STWWRR
Trigger: CCTCCGCCACCAGGTGGAGCAGCTAAGCAGTAGCCT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATCTGCTTCAGGCTACTaGTTAGCTGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSASGY*LAAPPG
Trigger: ACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCAGCAGTGGCCAGTTaGTGGGCATGGTCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAAVAS*WAWSCL
Trigger: TAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCAGCAGTGGCCAGTTaGTGGGCATGGTCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEAAVAS*WAWSCL
Trigger: TAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCCAGTGCCTCCAGCTaGTTGAGAGCCGCATCCCGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSSASS*LRAASR
Trigger: GCGGGATGCGGCTCTCAAGCAGCTGGAGGCACTGGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGGGCCTGGGCCTCATaGTGTTCCTGGCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRWAWAS*CSWRAV
Trigger: GACAGCCCGCCAGGAACAGCATGAGGCCCAGGCCCA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTCTTCCAGGGCATCTaGAGCCCTGCGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLFQGI*SPALLL
Trigger: GAGGAGAAGCGCAGGGCTGCAGATGCCCTGGAAGAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGAGATACAACGCTGCTaGTCTTCCAGGGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGEIQRC*SSRASA
Trigger: TGCAGATGCCCTGGAAGAGCAGCAGCGTTGTATCTC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGGGCCTCCCCAAGCTaGTGTAATCGAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGWASPS*CNRASS
Trigger: GCTGGAGGCTCGATTACAGCAGCTTGGGGAGGCCCA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGCTGTGGGATTCTATaGCTGCCACCTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRCGIL*LPPSPL
Trigger: CAAAGGAGAAGGTGGCAGGCATAGAATCCCACAGCG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGAGGCTGTTTCCTGCTaGTCACCTGCCTTGCGCACC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGEAVSC*SPALRT
Trigger: GGTGCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCGGGAGGCTGTTTCCTaGTGCTCACCTGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQREAVS*CSPALR
Trigger: GCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTCCCG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCATAGCCTGCAGCGCTaGCTGTGTGCTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTHSLQR*LCAAEL
Trigger: CAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTATG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCCCGCTCCATAGCCTaGAGCGCTGCCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSRSIA*SAACVL
Trigger: CAGCACACAGGCAGCGCTGCAGGCTATGGAGCGGGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAGCTCATTGCCCATCTaGTCTGCCTCCCGCTCCATA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSSLPI*SASRSI
Trigger: TATGGAGCGGGAGGCAGAGCAGATGGGCAATGAGCT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCACGCTCCTCCTGCTaGTGCCCCTGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPRSSC*CPWLSI
Trigger: GATGGAGAGCCAGGGGCAGCAGCAGGAGGAGCGTGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCGTTGAGGGCGTTCTaGAGCCGCATCTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSLRAF*SRISSS
Trigger: AGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCGAACTCCACACGCTaGTCGTTGAGGGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEANSTR*SLRAFC
Trigger: GCAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCAGGGCATGAGCCAGTaGCTCTTGCAGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGQGMSQ*LLQGSE
Trigger: TTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCCTGAGCCAGATGCGTaGTCCTTTTCTTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDPEPDA*SFSFLA
Trigger: GGCTAAGAAAGAAAAGGAGCACGCATCTGGCTCAGG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGCTCAGCCTCGAGGCTaGGTTCCAGGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQAQPRG*VPGCQP
Trigger: AGGCTGACAGCCTGGAACGCAGCCTCGAGGCTGAGC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGTGAGGTCAGCTCCTaGCGCAGGTTCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLCEVSS*RRFSEA
Trigger: GGCTTCAGAGAACCTGCGGCAGGAGCTGACCTCACA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCCTGTGTGCTGGTGTaGTCGAGCTGCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLACVLV*SSCRVE
Trigger: CTCCACCCTGCAGCTCGAGCACACCAGCACACAGGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCACCAGGGCCTGTGTaGTGGTGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSPGPV*WCARAA
Trigger: TGCAGCTCGAGCACACCAGCACACAGGCCCTGGTGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCACCAGGGCCTGTGTaGTGGTGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESPGPV*WCARAA
Trigger: TGCAGCTCGAGCACACCAGCACACAGGCCCTGGTGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCGGCCTGCTCGGCCTaGAGCTGCTGGCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKAACSA*SCWQRC
Trigger: GCACCTCTGCCAGCAGCTGCAGGCCGAGCAGGCCGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGTCCCCCAGCGGCCTaGTTGCTCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSPPAA*LLCSSS
Trigger: GGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTTGTTCGCTCCTGCTCTaGCACCTTCTGCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGCSLLL*HLLPQR
Trigger: CCTCTGCGGCAGAAGGTGGCAGAGCAGGAGCGAACA...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGTTCGCTCCTGCTCTaGCACCTTCTGCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKACSLLL*HLLPQR
Trigger: CCTCTGCGGCAGAAGGTGGCAGAGCAGGAGCGAACA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACATGCTCAGCTGCTCTaGATAGCTGGCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPHAQLL*IAGLLC
Trigger: GCAGAGAAGGCCAGCTATGCAGAGCAGCTGAGCATG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTCTGTGCTTCTCGCTaGACCTCAGCCAGACGGGTC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLCASR*TSARRV
Trigger: GACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACCGGGCAGTGCTCTGTaGTTCTCGCTGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLPGSAL*FSLHLS
Trigger: GCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACCAGCTCCCGGGCAGTaGTCTGTGCTTCTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLPAPGQ*SVLLAA
Trigger: TGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGGCAGTGAGTTTCTaGCTCTCTTCCTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWAVSF*LSSWNR
Trigger: GCGGTTCCAGGAAGAGAGGCAGAAACTCACTGCCCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTCAGGCCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGGAACTCAGGCCAGGCTaGCCAGGGTCAAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRPPSHERGHNPMSSCLAELRPG*PGSNPS
Trigger: GCTGGGGTTTGACCCTGGGCAGCCTGGCCTGAGTTC...CGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGGGTACGAGGCAGCTTaGTCAGAGGGTTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGGYEAA*SEGCWG
Trigger: CCCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACCCGCCCCCTCGCGCTaGCCTCTGATTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPPAPSR*PLIGLC
Trigger: ACAGAGGCCAATCAGAGGGCAGCGCGAGGGGGCGGG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613205.4
CDS-3UTR CCA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGAGCTCATGGTAGAGTaGTATAAGAGCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVELMVE*YKSSMV
Trigger: GACCATGCTGCTCTTATACCACTCTACCATGAGCTC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACTCCTTGGGCTCCAGTaGGCTGGCCGCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRLLGLQ*AGRLLL
Trigger: GAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTACCTCGCCCTTCTCCTaGGGTGGGTTATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKATSPFS*GGLSCS
Trigger: GCTGCAGGATAACCCACCCCAGGAGAAGGGCGAGGT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLAAAPC*LGQSQP
Trigger: TGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGCAGTTCATTCAGCTaGGCCTGGAGGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSCSSFS*AWRRWA
Trigger: GGCCCAGCGCCTCCAGGCCCAGCTGAATGAACTGCA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGCAGTTCATTCAGCTaGGCCTGGAGGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCSSFS*AWRRWA
Trigger: GGCCCAGCGCCTCCAGGCCCAGCTGAATGAACTGCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCCTTCTGGCTCAACTaGGCTTGCAGTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSFWLN*ACSSFS
Trigger: GCTGAATGAACTGCAAGCCCAGTTGAGCCAGAAGGA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCTGCCTGCTCCTTCTaGCTCAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLAACSF*LNWACS
Trigger: ACTGCAAGCCCAGTTGAGCCAGAAGGAGCAGGCAGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCTGCCTGCTCCTTCTaGCTCAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAACSF*LNWACS
Trigger: ACTGCAAGCCCAGTTGAGCCAGAAGGAGCAGGCAGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTACCTGGGCAGTAAGGTaGCGGCAGGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKATWAVR*RQVCSA
Trigger: GGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGACCTGGGCAGTAAGGTaGCGGCAGGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAETWAVR*RQVCSA
Trigger: GGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAGDTE*GPLLAA
Trigger: AGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGACGCTGGTGCCGTCTaGCTGGGTACGAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQDAGAV*LGTRQL
Trigger: AAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGTTCTCCAGGGACGCTaGTGCCGTCTGGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQVLQGR*CRLAGY
Trigger: GTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAAC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGTTCTCCAGGGACGCTaGTGCCGTCTGGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLVLQGR*CRLAGY
Trigger: GTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAAC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCCAGGGATTCTACCTTaGGGGGCAGGCGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSPGILP*GAGAGR
Trigger: TCTCCCAGCGCCTGCCCCCCAAGGTAGAATCCCTGG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCTCGCAGGCTAGCCTaGGAAGCAGGAGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGARRLA*EAGADR
Trigger: GCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCAGAACTGCGAGTGGTaGGGCGGTAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSQNCEW*GGSQAS
Trigger: GCTTGCCTGGCTACCGCCCCACCACTCGCAGTTCTG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCAGAACTGCGAGTaGTGGGGCGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLEQNCE*WGGSQA
Trigger: TGCCTGGCTACCGCCCCACCACTCGCAGTTCTGCTC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGATGTCCCATCCCCACCAGATGCCCATGGCTGCTTCACAGCAAACACGTCGAGCAGAACTGCGAGTaGTGGGGCGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PRCPIPTRCPWLLHSKHVEQNCE*WGGSQA
Trigger: TGCCTGGCTACCGCCCCACCACTCGCAGTTCTGCTC...GACGTGTTTGCTGTGAAGCAGCCATGGGCATCTGGTGGGGATGGGACATCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGAAGCTGTTCCTTCCTaGAGGGGCCCCACTGGACAC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGEAVPS*RGPTGH
Trigger: GTGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGAAGCTGTTCCTTCCTaGAGGGGCCCCACTGGACAC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEEAVPS*RGPTGH
Trigger: GTGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCAGGTCTTCAGATGTaGGGGGCACACTCGATTGCG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAGLQM*GAHSIA
Trigger: CGCAATCGAGTGTGCCCCCCACATCTGAAGACCTGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCAGGTCTTCAGATGTaGGGGGCACACTCGATTGCG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLAGLQM*GAHSIA
Trigger: CGCAATCGAGTGTGCCCCCCACATCTGAAGACCTGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGGATTGGCTGCATGCTaGCTCGGCGCAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGGLAAC*LGAGSL
Trigger: AAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTCGGCTATCTGGATTaGCTGCATGCTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAELGYLD*LHAGSA
Trigger: CGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGTGCCCTCGGCTATCTaGATTGGCTGCATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGVPSAI*IGCMLA
Trigger: AGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCAC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGAGTTCCAGGGCCCTaGTGGGGCTCTAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGVPGP*WGSRET
Trigger: GGTCTCCCTAGAGCCCCACCAGGGCCCTGGAACTCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGGGAGTCATGGGGCGTaGGAAACAGCTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAGSHGA*ETAGGL
Trigger: AAGGCCACCAGCTGTTTCCCACGCCCCATGACTCCC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGGAAFF*ASVVLC
Trigger: ACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLFHCEC*GKPWTG
Trigger: CCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGFHCEC*GKPWTG
Trigger: CCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCGCTGGCTGTGGTGGTaGCAATGCGCGGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGRWLWW*QCAENG
Trigger: GCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACGCTGGCTGTGGTGGTaGCAATGCGCGGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRRWLWW*QCAENG
Trigger: GCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACGGCGCTGGCTGTGGTaGTGGCAATGCGCGGAGAAC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRRRWLW*WQCAEN
Trigger: GTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGGCGGCGCTGGCTGTaGTGGTGGCAATGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPWRRWL*WWQCAE
Trigger: CTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACAGCAGTGGCGGCGCTaGCTGTGGTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRQQWRR*LWWWQC
Trigger: GCATTGCCACCACCACAGCCAGCGCCGCCACTGCTG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGAGGGGTGGCACCAATaGCGGCAGCAGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKEGWHQ*RQQWRR
Trigger: GCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCTTGGCTCGAGGGGTaGCACCAATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPWLEG*HQWRQQ
Trigger: CTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCTTTGCCTTGCCCTTaGCTCGAGGGGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGALPCP*LEGWHQ
Trigger: TTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCTTTGCCTTGCCCTTaGCTCGAGGGGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAALPCP*LEGWHQ
Trigger: TTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGCTACTGTTGGCCTaGGAGCTGAGAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWLLLA*ELREGT
Trigger: AGTGCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGAAAGAGCATCCTCTaGCAGGTGCTCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLGKSIL*QVLPPG
Trigger: ACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAGCATCTCTACCCTaGCTTGGAGCTGTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGPASLP*LGAVCC
Trigger: ACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAGCTTGGCTTCCTGCTaGCCTCGCTCAGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASLASC*PRSVSS
Trigger: GCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCTCAGCAAGCAGCTTaGCTTCCTGCTGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAQQAA*LPAGLA
Trigger: AGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGTCAGAGAGGCCACCTaGGCAGTCAACCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGVREAT*AVNRAP
Trigger: TGGGGCCCGGTTGACTGCCCAGGTGGCCTCTCTGAC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCCTGTTCTTGCTGTTaGAGGGTCTGTGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPACSCC*RVCASW
Trigger: CCAGCTAGCACAGACCCTCCAACAGCAAGAACAGGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTGTGTCACTGAGGTCTaGGCACTGTCCCGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTCVTEV*ALSRAS
Trigger: TGAAGCCCGGGACAGTGCCCAGACCTCAGTGACACA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGTCTCAACACAGGCCTaGAGTTCCTCCACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGVSTQA*SSSTFR
Trigger: CCGGAAGGTGGAGGAACTCCAGGCCTGTGTTGAGAC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCTGCAACCTGGGCCTaGGCCTCATGCTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASATWA*ASCCSW
Trigger: CCAGGAACAGCATGAGGCCCAGGCCCAGGTTGCAGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCTGCAACCTGGGCCTaGGCCTCATGCTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSATWA*ASCCSW
Trigger: CCAGGAACAGCATGAGGCCCAGGCCCAGGTTGCAGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGACTCTTTGAGGGCCTaGAGCTGCTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKADSLRA*SCSWSW
Trigger: CCAGCTCCAGGAGCAGCTCCAGGCCCTCAAAGAGTC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTGGCCAGGTTGGCATaGAGCTCAGCTAGTTCGTTC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLARLA*SSASSF
Trigger: GAACGAACTAGCTGAGCTCCATGCCAACCTGGCCAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCCTGCTGGAGTGCTCTaGCCAGGTTGGCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRPAGVL*PGWHGA
Trigger: AGCTCCATGCCAACCTGGCCAGAGCACTCCAGCAGG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATTCTCTTGGACCTGCTaGAGTGCTCTGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPFSWTC*SALARL
Trigger: CAACCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGTGTGCTGCAGAACTaGCGTCCCTGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCVLQN*RPCCSS
Trigger: GGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGGGCAAGGTCAGCCTaGGCACGGCCCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKRARSA*ARPRSW
Trigger: CCAGGAGCGGGGCCGTGCCCAGGCTGACCTTGCCCT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCTCAAGCTCTGCTCTaGCCGCCTTCTCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSQALL*PPSPGQ
Trigger: TTGCCCTGGAGAAGGCGGCCAGAGCAGAGCTTGAGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCCAGACCACGAAGCTTaGCCAACTCCTGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTPDHEA*PTPGPC
Trigger: GCAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCCAGCAGCCTCAGATTaGGCTCCTGAGCCAGATGCG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEPAASD*APEPDA
Trigger: CGCATCTGGCTCAGGAGCCCAATCTGAGGCTGCTGG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCTGTGCCCTAGCTCCTaGGCCTTCTCCTCTAACTGG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLLCPSS*AFSSNW
Trigger: CCAGTTAGAGGAGAAGGCCCAGGAGCTAGGGCACAG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCGGCCCCGGGCCACCTaGGCCTTCCACTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGRPRAT*AFHSSS
Trigger: TGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCCTGGCGATTCAGGATaGACACCTCCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGPGDSG*TPPPPS
Trigger: GCTTGGAGGAGGAGGTGTCCATCCTGAATCGCCAGG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCACGCCTTCAATTCTTaGCCCAGCTCCTCCGCACGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRHAFNS*PSSSAR
Trigger: GCGTGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCACGCCTTCAATTCTTaGCCCAGCTCCTCCGCACGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEHAFNS*PSSSAR
Trigger: GCGTGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCACGCCTTCAATTCTTaGCCCAGCTCCTCCGCACGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAHAFNS*PSSSAR
Trigger: GCGTGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAGGGCCTGCTCTTTCTaGAAGAACTTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRACSF*KNFSCH
Trigger: GTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCCAGGGCCTGTGTGCTaGTGTGCTCGAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGPGPVC*CARAAG
Trigger: CCCTGCAGCTCGAGCACACCAGCACACAGGCCCTGG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCTGCTCTGCATAGCTaGCCTTCTCTGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEAALHS*PSLPAA
Trigger: AGCTGCGGGCAGAGAAGGCCAGCTATGCAGAGCAGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCTGCTCTGCATAGCTaGCCTTCTCTGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAALHS*PSLPAA
Trigger: AGCTGCGGGCAGAGAAGGCCAGCTATGCAGAGCAGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGTGGCTCGCAGGCTAGCCTGGGAAGCAGGAGCAGACCGCGTGCTGTAGAACGATACTTCTCCCGGGCCTaGTCCAACTCCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGSQASLGSRSRPRAVERYFSRA*SNSTSR
Trigger: TCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTA...TCGTTCTACAGCACGCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCACGGCTGCCAACTCTTaGACATACTTCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTTAANS*TYFSRA
Trigger: GGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGACGGCTGCCAACTCTTaGACATACTTCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGTAANS*TYFSRA
Trigger: GGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGACGAGCGGAGCGGGTCTTACGACCCGAGTCCAGGAAGACGTCTCCCAGGGAGTGGCACCCTCATACTTaGCAGTCATCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRAERVLRPESRKTSPREWHPHT*QSSPPA
Trigger: AGCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCA...CTCCCTGGGAGACGTCTTCCTGGACTCGGGTCGTAAGACCCGCTCCGCTCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSGDTE*GPLLAA
Trigger: AGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGTAGCTGCTGCAGATaGCTGGCAAACTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAECSCCR*LANSRS
Trigger: GCTGCGGGAGTTTGCCAGTCATCTGCAGCAGCTACA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCCTCCGTCAGCTCATTaGGGGCATCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEPPSAH*GHPVAA
Trigger: AGCAGCTACAGGATGCCCTCAATGAGCTGACGGAGG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCGCTGGGAGATAGGTaGGGCTGGTTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGALGDR*GWFSRD
Trigger: GTCCCTGGAGAACCAGCCTCACCTATCTCCCAGCGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCGTGCTGTAGAACGATaGGTTGGCGCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAERAVER*VGAVWL
Trigger: GAGCCAGACAGCGCCAACTCATCGTTCTACAGCACG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAAGGCGAGCTAGAGACTaGGTAGAGGAGGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLRRARD*VEEVAR
Trigger: GCGAGCCACCTCCTCTACTCAGTCTCTAGCTCGCCT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAGGCGAGCTAGAGACTaGGTAGAGGAGGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQRRARD*VEEVAR
Trigger: GCGAGCCACCTCCTCTACTCAGTCTCTAGCTCGCCT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAAGCTGAGCAGGGCTaGGTTGCCATAATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTQAEQG*VAIIGR
Trigger: TCTCCCGATTATGGCAACTCAGCCCTGCTCAGCTTG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGTAGCCAGGCAAGCTaGGCAGGGCTGAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSGSQAS*AGLSCH
Trigger: ATGGCAACTCAGCCCTGCTCAGCTTGCCTGGCTACC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGGTAGCCAGGCAAGCTaGGCAGGGCTGAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLGSQAS*AGLSCH
Trigger: ATGGCAACTCAGCCCTGCTCAGCTTGCCTGGCTACC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGGTAGCCAGGCAAGCTaGGCAGGGCTGAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQGSQAS*AGLSCH
Trigger: ATGGCAACTCAGCCCTGCTCAGCTTGCCTGGCTACC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCATCTCCTCATCTGTaGTGGTGCCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESSPHL*WCPGSG
Trigger: CCCTGAGCCTGGGCACCATCACAGATGAGGAGATGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCATCTCCTCATCTGTaGTGGTGCCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASSPHL*WCPGSG
Trigger: CCCTGAGCCTGGGCACCATCACAGATGAGGAGATGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCTGCTGCCGGGTGGTaGTGCCAGTGCCCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKAAAGW*CQCPRL
Trigger: TAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGACAGGGCCTTCTTTaGGGCTCCCCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRGQGLL*GSPPQK
Trigger: CTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGGACAGGGCCTTCTTTaGGGCTCCCCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPGQGLL*GSPPQK
Trigger: CTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCGAGAAGGCGCCAGTaGAGGACCAGGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPRRRQ*RTRDQA
Trigger: GGCCTGGTCCCTGGTCCTTCACTGGCGCCTTCTCGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGTGTGAGCTGCTGCTaGAGGCTGTCCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRGVSCC*RLSPNP
Trigger: GGGGTTGGGGGACAGCCTTCAGCAGCAGCTCACACC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGGTGGAGGTTGCAGTaGGCCGAGATCGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAERWRLQ*AEIVPL
Trigger: CAATGGCACGATCTCGGCTCACTGCAACCTCCACCT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358965.10
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAACTTCAGTCTCAGCCTaGTGGGCCTCCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLTSVSA*WASPSC
Trigger: GCAGCTTGGGGAGGCCCATCAGGCTGAGACTGAAGT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAAGCTTCTGGGCCCTaGCTTCCTTCTCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTQASGP*LPSLGP
Trigger: AGGTCCAAGAGAAGGAAGTCAGGGCCCAGAAGCTTG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTTCTGGCTCTTCTCTaGCTCGGCCATCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLLALL*LGHHQP
Trigger: CGGCTGGTGATGGCCGAGTCAGAGAAGAGCCAGAAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTGCCGCAGGTTCTCTaGAGCCACCCGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLPQVL*SHPLFL
Trigger: GAGAAACAGCGGGTGGCTTCAGAGAACCTGCGGCAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCGCACGCTCAGCCTGTaGGGTCAGCTCCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKRTLSL*GQLLPQ
Trigger: CTGCGGCAGGAGCTGACCTCACAGGCTGAGCGTGCG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCTGCCCGCAGCTGCTaGGCTGTTCGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSARSC*AVRSCS
Trigger: AGAGCAGGAGCGAACAGCTCAGCAGCTGCGGGCAGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCTCCTCCAGGACCTTaGCCTTGGCACCCTCATACT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSPPGP*PWHPHT
Trigger: AGTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCTCCTCCAGGACCTTaGCCTTGGCACCCTCATACT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSPPGP*PWHPHT
Trigger: AGTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGAACTGTGGGGTCTaGAGGATATCACCCATGGGA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWNCGV*RISPMG
Trigger: TCCCATGGGTGATATCCTGCAGACCCCACAGTTCCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGTGGGCTGGCCGCCTaGTTCTCATTCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSGLAA*FSFSRA
Trigger: AGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAGTGGGCTGGCCGCCTaGTTCTCATTCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSGLAA*FSFSRA
Trigger: AGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGCTTCAGGGTTTCATaGAGCCGCATGGTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCFRVS*SRMVRL
Trigger: GAGCCTTACCATGCGGCTGCATGAAACCCTGAAGCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGACTCCTGAGTGGCCTTaGTGTGCTCCTCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRTPEWP*CAPPSA
Trigger: AGCTGACGGAGGAGCACAGCAAGGCCACTCAGGAGT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTACTCCTGAGTGGCCTTaGTGTGCTCCTCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKATPEWP*CAPPSA
Trigger: AGCTGACGGAGGAGCACAGCAAGGCCACTCAGGAGT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGGCATTTCTTGTCCTaGAGGGCTGCGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAERHFLS*RAALSS
Trigger: GGAGCTCAGCGCAGCCCTGCAGGACAAGAAATGCCT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGGGTGGGTTATCCTaGAGCTGGGACAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWGGLS*SWDKCS
Trigger: AGAACACTTGTCCCAGCTGCAGGATAACCCACCCCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTCCGCAGCTGCTCCTaGAGCTCTTGGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLRSCS*SSWFCC
Trigger: GCAGCAGAACCAAGAGCTGCAGGAGCAGCTGCGGAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCCAGGCTCCGCAGCTaGTCCTGCAGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSRLRS*SCSSWF
Trigger: GAACCAAGAGCTGCAGGAGCAGCTGCGGAGCCTGGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTTCGAAGCTGCTGGTCTaGATGGGCAACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGSKLLV*MGNLCL
Trigger: GAGGCACAGGTTGCCCATGCAGACCAGCAGCTTCGA...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCCCAGGTCTCGAAGCTaGTGGTCTGCATGGGCAACC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQPRSRS*WSAWAT
Trigger: GGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCAGGAGCAGACCGCGTaGTGTAGAACGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGQEQTA*CRTMSW
Trigger: CCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAACGACGAGCAGAACTaGGAGTGGTGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQNDEQN*EWWGGS
Trigger: GCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPAHPGK*PCRSCS
Trigger: GGAACAGCTTCTACATGGGCACTTGCCAGGATGAGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCGCTGCTGCAGCTCTaGAATGCGGTTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEALLQL*NAVPVI
Trigger: GATGACTGGAACCGCATTGCAGAGCTGCAGCAGCGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCGCTGCTGCAGCTCTaGAATGCGGTTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGALLQL*NAVPVI
Trigger: GATGACTGGAACCGCATTGCAGAGCTGCAGCAGCGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCACTCGATTGCGCTGCTaGAGCTCTGCAATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTTRLRC*SSAMRF
Trigger: GAACCGCATTGCAGAGCTGCAGCAGCGCAATCGAGT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGACTCGATTGCGCTGCTaGAGCTCTGCAATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGTRLRC*SSAMRF
Trigger: GAACCGCATTGCAGAGCTGCAGCAGCGCAATCGAGT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGGGGGCACACTCGATTaGGCTGCTGCAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLGGTLD*AAAALQ
Trigger: TTGCAGAGCTGCAGCAGCGCAATCGAGTGTGCCCCC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCTGGATTGGCTGCATaGTGGCTCGGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSGLAA*WLGAGS
Trigger: AGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCTGGATTGGCTGCATaGTGGCTCGGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSGLAA*WLGAGS
Trigger: AGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGCTATCTGGATTGGCTaGATGCTGGCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQAIWIG*MLARRR
Trigger: CCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCACCCGTTTGCGCTGCTaGCGGGTGGTGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGTRLRC*RVVMPV
Trigger: CACTGGCATCACCACCCGGCAGCAGCGCAAACGGGT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGAGACCCGTTTGCGCTaGTGCCGGGTGGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGETRLR*CRVVMP
Trigger: TGGCATCACCACCCGGCAGCAGCGCAAACGGGTCTC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAGTAGAAGCTGGAGCTaGTTTCTTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSRSWS*FLLGLS
Trigger: ACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAAGAGTGAGGGCCCCTaGTGGGCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPKSEGP*WAQPPG
Trigger: TCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGCGCGCTCCCGCTCTaGCTCGCGATTCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGCALPL*LAILRN
Trigger: ATTCCGGAGAATCGCGAGGCAGAGCGGGAGCGCGCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGTGAGCCGAGATCGTaGCATTGCACTCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSEPRS*HCTPDS
Trigger: GGAGTCTGGAGTGCAATGGCACGATCTCGGCTCACT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358965.10
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCATCAGGCTAGACAGCTaGTGCTTTTCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAIRLDS*CFSSSK
Trigger: CTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGAT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATTGGAGATGGAGCTCTaGAGGTCAGTGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGLEMEL*RSVIRL
Trigger: TAGCCTGATCACTGACCTGCAGAGCTCCATCTCCAA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGTGCTAGCTGGGCCTaGTTCTCTTTGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKACASWA*FSLACC
Trigger: GCAGCAGGCCAAAGAGAAGCAGGCCCAGCTAGCACA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGTGCTAGCTGGGCCTaGTTCTCTTTGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCASWA*FSLACC
Trigger: GCAGCAGGCCAAAGAGAAGCAGGCCCAGCTAGCACA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCTACCTCCTTCAACTaGTGCTCCTTCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPATSFN*CSFCFR
Trigger: CCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGTAGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCATGGTCCTGCCTAGTTaGCTCCTGCTTCTCCGCTAC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTMVLPS*LLLLRY
Trigger: GTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCAT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGCTGGGCATGGTCCTaGCTAGTTGCCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCWAWS*LVASCF
Trigger: GAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGCCTCTCGCTCCTCTaGAGCAGTGGCCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGLSLL*SSGQLL
Trigger: CAGCAACTGGCCACTGCTGCAGAGGAGCGAGAGGCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGTGCCTCCAGCTaGTTGAGAGCCGCATCCCGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSSASS*LRAASR
Trigger: GCGGGATGCGGCTCTCAAGCAGCTGGAGGCACTGGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGCTCAGACCGCAGCTaGAACTCTAGCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGCSDRS*NSSSAT
Trigger: GGTTGCAGAGCTAGAGTTGCAGCTGCGGTCTGAGCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGGGCATCTGCAGCCCTaGGCTTCTCCTCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLGHLQP*ASPLQG
Trigger: GCCTTGAAGAGGAGAAGCGCAGGGCTGCAGATGCCC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTTTCGTTCCCGCTTATaGTGCTCCACCAGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTFRSRL*CSTRLR
Trigger: CCGAAGCCTGGTGGAGCAGCATAAGCGGGAACGAAA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCACTCTCAGCTGTGTaGTGGGCAGCCATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSLSAV*WAAMAS
Trigger: AGAGGCCATGGCTGCCCAGCACACAGCTGAGAGTGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATTCTCCTTTGCCTCCTaGAGCTCCTGGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLFSFAS*SSWRAF
Trigger: GAAGGCCCGCCAGGAGCTGCAGGAGGCAAAGGAGAA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGTGGGATTCTATGCCTaGCACCTTCTCCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPVGFYA*HLLLCL
Trigger: GAGGCAAAGGAGAAGGTGGCAGGCATAGAATCCCAC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTTGGACCTGCTGGAGTaGTCTGGCCAGGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLDLLE*SGQVGM
Trigger: CATGCCAACCTGGCCAGAGCACTCCAGCAGGTCCAA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCCTTCTCTTGGACCTaGTGGAGTGCTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESFSWT*WSALAR
Trigger: CCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAAGGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGAGTGGAGAGGTCATCTaGAAGCTTCTGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSGEVI*KLLGPD
Trigger: GTCAGGGCCCAGAAGCTTGCAGATGACCTCTCCACT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGTGGAGAGGTCATCTaGAAGCTTCTGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSGEVI*KLLGPD
Trigger: GTCAGGGCCCAGAAGCTTGCAGATGACCTCTCCACT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGCTGCTCACCTGCCTTaGGCACCAAGGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSAAHLP*APRSPS
Trigger: GCTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGAGGCTGTTTCCTGCTaGTCACCTGCCTTGCGCACC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSEAVSC*SPALRT
Trigger: GGTGCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGCGCTGCCTGTGTGCTaGAGAACTGGCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQALPVC*RTGVPV
Trigger: AACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCATAGCCTGCAGCGCTaGCTGTGTGCTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEHSLQR*LCAAEL
Trigger: CAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTATG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGATTGCCCATCTGCTCTaGCTCCCGCTCCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEIAHLL*LPLHSL
Trigger: CAGGCTATGGAGCGGGAGGCAGAGCAGATGGGCAAT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCATTGCCCATCTGCTCTaGCTCCCGCTCCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGIAHLL*LPLHSL
Trigger: CAGGCTATGGAGCGGGAGGCAGAGCAGATGGGCAAT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAGCTCATTGCCCATCTaGTCTGCCTCCCGCTCCATA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSSLPI*SASRSI
Trigger: TATGGAGCGGGAGGCAGAGCAGATGGGCAATGAGCT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGCTCATTGCCCATCTaGTCTGCCTCCCGCTCCATA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSSLPI*SASRSI
Trigger: TATGGAGCGGGAGGCAGAGCAGATGGGCAATGAGCT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCCGTTCCAGCTCATTaGCCATCTGCTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAVPAH*PSALPP
Trigger: GGGAGGCAGAGCAGATGGGCAATGAGCTGGAACGGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACGCTCCTCCTGCTGCTaGCCCTGGCTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPRSSCC*PWLSIS
Trigger: GCTGATGGAGAGCCAGGGGCAGCAGCAGGAGGAGCG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACCACGCTCCTCCTGCTaGTGCCCCTGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPPRSSC*CPWLSI
Trigger: GATGGAGAGCCAGGGGCAGCAGCAGGAGGAGCGTGG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCCGCATCTCAAGCTCTaGTCTGGCCGCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQPHLKL*SGRLLQ
Trigger: CTGGAGAAGGCGGCCAGAGCAGAGCTTGAGATGCGG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCGTTGAGGGCGTTCTaGAGCCGCATCTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSLRAF*SRISSS
Trigger: AGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGCTGTTCCTTCAGTTaGTTCACGGTTTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSCSFS*FTVCRS
Trigger: ACTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGCTGCTTCTGGCATTaGTGTTCCAGCTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCCFWH*CSSLLT
Trigger: GGTGAGCAAGCTGGAACAGCAATGCCAGAAGCAGCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCTCAGCCTCGAGGCTaGGTTCCAGGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRAQPRG*VPGCQP
Trigger: AGGCTGACAGCCTGGAACGCAGCCTCGAGGCTGAGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCCTCTAACTGGCCCTaGAGAGTCTCCAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSSNWP*RVSRAL
Trigger: CAGTGCTCTGGAGACTCTGCAGGGCCAGTTAGAGGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCCCGCAGAGCAGAGCTaGGTTCTGCAGCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGPAEQS*VLQLWH
Trigger: GTGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGTGAGGTCAGCTCCTaGCGCAGGTTCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCEVSS*RRFSEA
Trigger: GGCTTCAGAGAACCTGCGGCAGGAGCTGACCTCACA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGTGAGGTCAGCTCCTaGCGCAGGTTCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAECEVSS*RRFSEA
Trigger: GGCTTCAGAGAACCTGCGGCAGGAGCTGACCTCACA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGTGAGGTCAGCTCCTaGCGCAGGTTCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKACEVSS*RRFSEA
Trigger: GGCTTCAGAGAACCTGCGGCAGGAGCTGACCTCACA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCCTGTGTGCTGGTGTaGTCGAGCTGCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGACVLV*SSCRVE
Trigger: CTCCACCCTGCAGCTCGAGCACACCAGCACACAGGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTTCTCGGCAGCGGCCTaGTCGGCCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKFSAAA*SACSCW
Trigger: CCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGTCCCCCAGCGGCCTaGTTGCTCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSPPAA*LLCSSS
Trigger: GGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGTTCGCTCCTGCTCTaGCACCTTCTGCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCSLLL*HLLPQR
Trigger: CCTCTGCGGCAGAAGGTGGCAGAGCAGGAGCGAACA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCATGCTCAGCTGCTCTaGATAGCTGGCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGHAQLL*IAGLLC
Trigger: GCAGAGAAGGCCAGCTATGCAGAGCAGCTGAGCATG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCATGCTCAGCTGCTCTaGATAGCTGGCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTHAQLL*IAGLLC
Trigger: GCAGAGAAGGCCAGCTATGCAGAGCAGCTGAGCATG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGCGCCTTCTTCAGCATaGTCAGCTGCTCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTAPSSA*SAALHS
Trigger: GCTATGCAGAGCAGCTGAGCATGCTGAAGAAGGCGC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCCACTTCCAGAAACTaGCGGCCAAGGTTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSTSRN*RPRLAR
Trigger: GCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCCGGGCAGTGCTCTGTaGTTCTCGCTGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGPGSAL*FSLHLS
Trigger: GCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCTTCCTGGAACCGCTaGCTCTCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASSWNR*LSSRTL
Trigger: CAAGGTCCTGGAGGAGAGGCAGCGGTTCCAGGAAGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCTTCCTGGAACCGCTaGCTCTCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSSWNR*LSSRTL
Trigger: CAAGGTCCTGGAGGAGAGGCAGCGGTTCCAGGAAGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGGGCAGTGAGTTTCTaGCTCTCTTCCTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLWAVSF*LSSWNR
Trigger: GCGGTTCCAGGAAGAGAGGCAGAAACTCACTGCCCA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTAGTCCTTTCCCTGGTCTaGTTCATCTCCTCTCACCTA +
Preference number: 4 (lower is better)
Translates to: TGHPGLGTTSRTASGGAVVLSLV*FISSHL
Trigger: TAGGTGAGAGGAGATGAAGCAGACCAGGGAAAGGAC...TACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTCCAATGCGCCTCCTaGTGGAAGCCTCCACACACT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKALQCAS*WKPPHT
Trigger: AGTGTGTGGAGGCTTCCACCAGGAGGCGCATTGGAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351960.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGAAAGTTGTTCCCACTaGAAGAGGAGGCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDESCSH*KRRQPS
Trigger: AGAAGGTTGCCTCCTCTTCCAGTGGGAACAACTTTC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTTCAGCCGTCTCATCTaGAACTGTGGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGFSRLI*NCGVCR
Trigger: CCTGCAGACCCCACAGTTCCAGATGAGACGGCTGAA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTTCAGCCGTCTCATCTaGAACTGTGGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTFSRLI*NCGVCR
Trigger: CCTGCAGACCCCACAGTTCCAGATGAGACGGCTGAA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGGGCTCCAGTGGGCTaGCCGCCTGCTTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLWAPVG*PPASHS
Trigger: TGAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGGGCTCCAGTGGGCTaGCCGCCTGCTTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSWAPVG*PPASHS
Trigger: TGAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATCTGTCTTCAGGTCCTaGCACTGCTTCAGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSVFRS*HCFRVS
Trigger: TGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTAGCCACTCCTGAGTaGCCTTGCTGTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLATPE*PCCAPP
Trigger: CGGAGGAGCACAGCAAGGCCACTCAGGAGTGGCTAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTAGCCACTCCTGAGTaGCCTTGCTGTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLATPE*PCCAPP
Trigger: CGGAGGAGCACAGCAAGGCCACTCAGGAGTGGCTAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGGTTATCCTGCAGCTaGGACAAGTGTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGLSCS*DKCSSS
Trigger: GCTGGAAGAACACTTGTCCCAGCTGCAGGATAACCC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGAAAPC*LGQSQP
Trigger: TGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCTGTTCAGCCTCCTTaGTCTTCAGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSVQPP*SSAQPA
Trigger: AGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCTGTTCAGCCTCCTTaGTCTTCAGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSVQPP*SSAQPA
Trigger: AGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTACCTGGGCAGTAAGGTaGCGGCAGGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSTWAVR*RQVCSA
Trigger: GGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATCCAGGCTGCGCACCTaGGCAGTAAGGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSRLRT*AVRWRQ
Trigger: CTGCCGCCACCTTACTGCCCAGGTGCGCAGCCTGGA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGCTGCTGGTCTGCATaGGCAACCTGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSCWSA*ATCASR
Trigger: CCTGGAGGCACAGGTTGCCCATGCAGACCAGCAGCT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGATGTCCCATCCCCACCAGATGCCCATGGCTGCTTCACAGCAAACACGTCAGCTGCTGGTCTGCATaGGCAACCTGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRCPIPTRCPWLLHSKHVSCWSA*ATCASR
Trigger: CCTGGAGGCACAGGTTGCCCATGCAGACCAGCAGCT...GACGTGTTTGCTGTGAAGCAGCCATGGGCATCTGGTGGGGATGGGACATCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPASVAT*NLPRSR
Trigger: TCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGCTGGGGCTTAGCCTaGGGCTCACGGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSWGLA*GSRLFK
Trigger: TTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGILKSS*GLAWGS
Trigger: TGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTAT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSAGDTE*GPLLAA
Trigger: AGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAGDTE*GPLLAA
Trigger: AGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGTTCTCCAGGGACGCTaGTGCCGTCTGGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRVLQGR*CRLAGY
Trigger: GTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAAC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCAGGGATTCTACCTTaGGGGGCAGGCGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPGILP*GAGAGR
Trigger: TCTCCCAGCGCCTGCCCCCCAAGGTAGAATCCCTGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCCAGGGATTCTACCTTaGGGGGCAGGCGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGPGILP*GAGAGR
Trigger: TCTCCCAGCGCCTGCCCCCCAAGGTAGAATCCCTGG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTCGCAGGCTAGCCTaGGAAGCAGGAGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRARRLA*EAGADR
Trigger: GCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGCCCAGAAGCTGTTCCTTCCTaGAGGGGCCCCACTGGACAC +
Preference number: 4 (lower is better)
Translates to: PPSHERGHNPMSSCLASPEAVPS*RGPTGH
Trigger: GTGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTC...TGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCAGGTCTTCAGATGTaGGGGGCACACTCGATTGCG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAGLQM*GAHSIA
Trigger: CGCAATCGAGTGTGCCCCCCACATCTGAAGACCTGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCAGGTCTTCAGATGTaGGGGGCACACTCGATTGCG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGAGLQM*GAHSIA
Trigger: CGCAATCGAGTGTGCCCCCCACATCTGAAGACCTGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCGGCGCAGGGTCTCTTaGGGGTCTCCAGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRRRRVS*GSPVFI
Trigger: GATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTCGGCTATCTGGATTaGCTGCATGCTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLGYLD*LHAGSA
Trigger: CGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGTGCCCTCGGCTATCTaGATTGGCTGCATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRVPSAI*IGCMLA
Trigger: AGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCAC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGGGAGTCATGGGGCGTaGGAAACAGCTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLGSHGA*ETAGGL
Trigger: AAGGCCACCAGCTGTTTCCCACGCCCCATGACTCCC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGGGAGTCATGGGGCGTaGGAAACAGCTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQGSHGA*ETAGGL
Trigger: AAGGCCACCAGCTGTTTCCCACGCCCCATGACTCCC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGTCTCGGGGAGTCATaGGGCGTGGGAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGLGES*GVGNSW
Trigger: CCAGCTGTTTCCCACGCCCCATGACTCCCCGAGACC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGGTCTCGGGGAGTCATaGGGCGTGGGAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRGLGES*GVGNSW
Trigger: CCAGCTGTTTCCCACGCCCCATGACTCCCCGAGACC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTGAAGGCCATCGACTaGCGCCGGTCAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLKAID*RRSACL
Trigger: TAAACAGGCTGACCGGCGCCAGTCGATGGCCTTCAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTGAAGGCCATCGACTaGCGCCGGTCAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAELKAID*RRSACL
Trigger: TAAACAGGCTGACCGGCGCCAGTCGATGGCCTTCAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTGAAGGCCATCGACTaGCGCCGGTCAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLKAID*RRSACL
Trigger: TAAACAGGCTGACCGGCGCCAGTCGATGGCCTTCAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGFHCEC*GKPWTG
Trigger: CCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAFHCEC*GKPWTG
Trigger: CCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCTTTGCCTTGCCCTTaGCTCGAGGGGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLALPCP*LEGWHQ
Trigger: TTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGCTTTGCCTTGCCCTTaGCTCGAGGGGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSALPCP*LEGWHQ
Trigger: TTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGGTGGGGCCACTCACTaGTACTGGCCCTTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEGGATH*YWPFSA
Trigger: AGCACTAAAGGGCCAGTACCAGTGAGTGGCCCCACC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTGGCTACTGTTGGCCTaGGAGCTGAGAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTWLLLA*ELREGT
Trigger: AGTGCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGATGCTCCAGGCCCCCTaGGCCAGCTCCGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKMLQAP*ASSEKA
Trigger: CGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCAT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGGTCAGACCCAGTCCTaGACTTCAAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRGQTQS*TSRVRA
Trigger: GGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGAATTAGTTTCCACCTaGCTGCGCGCTCCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRELVST*LRAPAL
Trigger: CAGAGCGGGAGCGCGCAGCCAGGTGGAAACTAATTC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGCTTGGCTTCCTGCTaGCCTCGCTCAGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSLASC*PRSVSS
Trigger: GCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCTCAGCAAGCAGCTTaGCTTCCTGCTGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAQQAA*LPAGLA
Trigger: AGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATTTTCTTCTTCGAAGTaGCCCCGCTCAGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPFSSSK*PRSASS
Trigger: GCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGTGGCGGAGGCCCTaGGAGGCCTGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWWRRP*EACSCC
Trigger: ACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGCAGTGGCCAGTTGCTaGGCATGGTCCTGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRAVASC*AWSCLV
Trigger: AACTAGGCAGGACCATGCCCAGCAACTGGCCACTGC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCAGAATCTCCAGCTTaGCAGCCTTCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPAESPA*QPSPSP
Trigger: TGGAGAAGGAGAAGGCTGCCAAGCTGGAGATTCTGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAAGCTGCTCCTGGAGCTaGTCCTTCTCCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSCSWS*SFSWAT
Trigger: GGTGGCCCAGGAGAAGGACCAGCTCCAGGAGCAGCT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCCTCCTGCAGCTCCTaGCGGGCCTTCTCACATTCC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRASCSS*RAFSHS
Trigger: GGAATGTGAGAAGGCCCGCCAGGAGCTGCAGGAGGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGTGCTCTGGCCAGGTTaGCATGGAGCTCAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLVLWPG*HGAQLV
Trigger: AACTAGCTGAGCTCCATGCCAACCTGGCCAGAGCAC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGTGTGCTGCAGAACTaGCGTCCCTGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLCVLQN*RPCCSS
Trigger: GGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCTCAAGCTCTGCTCTaGCCGCCTTCTCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESQALL*PPSPGQ
Trigger: TTGCCCTGGAGAAGGCGGCCAGAGCAGAGCTTGAGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACCAGCAGCCTCAGATTaGGCTCCTGAGCCAGATGCG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLPAASD*APEPDA
Trigger: CGCATCTGGCTCAGGAGCCCAATCTGAGGCTGCTGG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGCCTTCTCCTCTAACTaGCCCTGCAGAGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTAFSSN*PCRVSR
Trigger: TCTGGAGACTCTGCAGGGCCAGTTAGAGGAGAAGGC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTGTGCCCTAGCTCCTaGGCCTTCTCCTCTAACTGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAELCPSS*AFSSNW
Trigger: CCAGTTAGAGGAGAAGGCCCAGGAGCTAGGGCACAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCCTGGCGATTCAGGATaGACACCTCCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAPGDSG*TPPPPS
Trigger: GCTTGGAGGAGGAGGTGTCCATCCTGAATCGCCAGG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCCTTCTCCAGGACCTaGCGATTCAGGATGGACACC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSFSRT*RFRMDT
Trigger: GGTGTCCATCCTGAATCGCCAGGTCCTGGAGAAGGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTCTGGCACTGTTGCTaGCTGTCTCTGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAELWHCC*LSLPAA
Trigger: TGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTCTGGCACTGTTGCTaGCTGTCTCTGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLWHCC*LSLPAA
Trigger: TGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTGCGTTCTGCAGCTCTaGCACTGTTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTCVLQL*HCCWLS
Trigger: AGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCACGCCTTCAATTCTTaGCCCAGCTCCTCCGCACGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSHAFNS*PSSSAR
Trigger: GCGTGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACCAGGGCCTGTGTGCTaGTGTGCTCGAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRPGPVC*CARAAG
Trigger: CCCTGCAGCTCGAGCACACCAGCACACAGGCCCTGG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCGGCCTGCAGCTGCTaGCAGAGGTGCTTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSACSC*QRCLAG
Trigger: GCCAGCTAAGCACCTCTGCCAGCAGCTGCAGGCCGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCAGCTCCTCACGGTaGCGTTTCTCGGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSSSSR*RFSAAA
Trigger: GGCCGCTGCCGAGAAACGCCACCGTGAGGAGCTGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTACTTCTCCCGGGCCTaGTCCAACTCCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGYFSRA*SNSTSR
Trigger: TCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGGCACCCTCATACTTaGCAGTCATCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPWHPHT*QSSPPA
Trigger: AGCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GGTGGCTCGCAGGCTAGCCTGGGAAGCAGGAGCAGACCGCGTGCTGTAGAACGAATAGTCGGTCTCCAATaGGCCTTCCTGGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: GGSQASLGSRSRPRAVERIVGLQ*AFLASH
Trigger: ATGTGAGGCCAGGAAGGCCCATTGGAGACCGACTAT...TCGTTCTACAGCACGCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR CAA 72 bp GGGACGCTGGTGCCGTCTGGCTGGGTACGAGGCAGCTaGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTLVPSGWVRGS*LWKGNLLRYSP
Trigger: AGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGTGCATCCTTCTCGGTaGGGAGCTTGCGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLVHPSR*GACGSQ
Trigger: CTGAGAACCGCAAGCTCCTCACCGAGAAGGATGCAC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCCTCCGAAAGCTGGTTaGTTTTGCGATCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGPPKAG*FCDPSG
Trigger: GCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGTAGCTGCTGCAGATaGCTGGCAAACTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLCSCCR*LANSRS
Trigger: GCTGCGGGAGTTTGCCAGTCATCTGCAGCAGCTACA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGTAGCTGCTGCAGATaGCTGGCAAACTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCSCCR*LANSRS
Trigger: GCTGCGGGAGTTTGCCAGTCATCTGCAGCAGCTACA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCGCTGGGAGATAGGTaGGGCTGGTTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPALGDR*GWFSRD
Trigger: GTCCCTGGAGAACCAGCCTCACCTATCTCCCAGCGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCGTGCTGTAGAACGATaGGTTGGCGCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQRAVER*VGAVWL
Trigger: GAGCCAGACAGCGCCAACTCATCGTTCTACAGCACG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCATCTCCTCATCTGTaGTGGTGCCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSSPHL*WCPGSG
Trigger: CCCTGAGCCTGGGCACCATCACAGATGAGGAGATGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGACAGGGCCTTCTTTaGGGCTCCCCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGQGLL*GSPPQK
Trigger: CTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAGGCCAGCCAGTTCTTaGTCCTGTTGCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRRPASS*SCCWMV
Trigger: CACCATCCAGCAACAGGATCAAGAACTGGCTGGCCT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCTGGGCCTGTGTCACTaGGGTCTGGGCACTGTCCCG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKLGLCH*GLGTVP
Trigger: CGGGACAGTGCCCAGACCTCAGTGACACAGGCCCAG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCCTTCAAGGACTCTTTaGGGGCCTGGAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSPSRTL*GPGAAP
Trigger: AGGAGCAGCTCCAGGCCCTCAAAGAGTCCTTGAAGG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCAAGCTTCTGGGCCCTaGCTTCCTTCTCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEQASGP*LPSLGP
Trigger: AGGTCCAAGAGAAGGAAGTCAGGGCCCAGAAGCTTG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCACACGCTGCTCGTTaGGGGCGTTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPHAAR*GRSAAA
Trigger: TGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTTTTCCGTCAGGGCATaGGCCAGTGCCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSFSVRA*ASASCR
Trigger: CCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCTCAGATTGGGCTCCTaGGCCAGATGCGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQLRLGS*ARCVLL
Trigger: AAGGAGCACGCATCTGGCTCAGGAGCCCAATCTGAG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCTCCTCCAGGACCTTaGCCTTGGCACCCTCATACT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSPPGP*PWHPHT
Trigger: AGTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTTCCACCTGGGCAGTaGGTTTCTGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKALPPGQ*VSASLP
Trigger: AGGAAGAGAGGCAGAAACTCACTGCCCAGGTGGAAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTTCCACCTGGGCAGTaGGTTTCTGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLPPGQ*VSASLP
Trigger: AGGAAGAGAGGCAGAAACTCACTGCCCAGGTGGAAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGGCTGCTTCAAGATTTaGTGTCCCTCTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPGCFKI*CPSSVP
Trigger: TGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLLSDTG*FKICCP
Trigger: GGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGGAACTGTGGGGTCTaGAGGATATCACCCATGGGA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGWNCGV*RISPMG
Trigger: TCCCATGGGTGATATCCTGCAGACCCCACAGTTCCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTGGAACTGTGGGGTCTaGAGGATATCACCCATGGGA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTWNCGV*RISPMG
Trigger: TCCCATGGGTGATATCCTGCAGACCCCACAGTTCCA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGGAACTGTGGGGTCTaGAGGATATCACCCATGGGA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLWNCGV*RISPMG
Trigger: TCCCATGGGTGATATCCTGCAGACCCCACAGTTCCA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCGGTCAATGCGCTGCTaGATCATGGCTATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLRSMRC*IMAICA
Trigger: TGCACAGATAGCCATGATGCAGCAGCGCATTGACCG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGTGGGCTGGCCGCCTaGTTCTCATTCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSGLAA*FSFSRA
Trigger: AGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTTCAGGTCCTGGCACTaGTTCAGGGTTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGFRSWH*FRVSCS
Trigger: GCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCTGCTGCTGCACCTTaGTGGCTTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESAAAP*WLGQSQ
Trigger: CTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCTGCTGCTGCACCTTaGTGGCTTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSAAAP*WLGQSQ
Trigger: CTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGGCTCAACTGGGCTTaGAGTTCATTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEWLNWA*SSFSWA
Trigger: GGCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGGCTCAACTGGGCTTaGAGTTCATTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRWLNWA*SSFSWA
Trigger: GGCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLIVLS*LLLLAQ
Trigger: TTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGTCTTCAGCCCAGCCTaGTGTAGCTCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGVFSPA*CSSWPS
Trigger: GCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGAC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGCATGGGCAACCTGTaGCTCCAGGCTGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPCMGNL*LQAAHL
Trigger: CAGGTGCGCAGCCTGGAGGCACAGGTTGCCCATGCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCCAGGTCTCGAAGCTaGTGGTCTGCATGGGCAACC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPRSRS*WSAWAT
Trigger: GGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQVMLMI*VVRRRA
Trigger: CGCTCGTCGGCGCACCACGCAGATCATCAACATCAC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCAGGAGCAGACCGCGTaGTGTAGAACGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRQEQTA*CRTMSW
Trigger: CCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCAGGAGCAGACCGCGTaGTGTAGAACGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEQEQTA*CRTMSW
Trigger: CCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCAGGAGCAGACCGCGTaGTGTAGAACGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAQEQTA*CRTMSW
Trigger: CCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAACGACGAGCAGAACTaGGAGTGGTGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGNDEQN*EWWGGS
Trigger: GCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTTCCAGTCATCCAGCTaGTCAGGCTCATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLFQSSS*SGSSWQ
Trigger: TTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCTGCAGCTCTGCAATaGGGTTCCAGTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAAALQ*GSSHPA
Trigger: AGCTGGATGACTGGAACCGCATTGCAGAGCTGCAGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGCTGCAGCTCTGCAATaGGGTTCCAGTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRAAALQ*GSSHPA
Trigger: AGCTGGATGACTGGAACCGCATTGCAGAGCTGCAGC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGACTCGATTGCGCTGCTaGAGCTCTGCAATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRTRLRC*SSAMRF
Trigger: GAACCGCATTGCAGAGCTGCAGCAGCGCAATCGAGT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCACACTCGATTGCGCTaGTGCAGCTCTGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSHTRLR*CSSAMR
Trigger: CCGCATTGCAGAGCTGCAGCAGCGCAATCGAGTGTG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGGGGGCACACTCGATTaGGCTGCTGCAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRGGTLD*AAAALQ
Trigger: TTGCAGAGCTGCAGCAGCGCAATCGAGTGTGCCCCC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGGGGCACACTCGATTaGGCTGCTGCAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGGTLD*AAAALQ
Trigger: TTGCAGAGCTGCAGCAGCGCAATCGAGTGTGCCCCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCTGGATTGGCTGCATaGTGGCTCGGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSGLAA*WLGAGS
Trigger: AGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAACGGCGGGTTCCACTaGGAGTGTTGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGNGGFH*ECWGKP
Trigger: AGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTTTAGTGCTTTGCCTTaGCCTTGGCTCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEFSALP*PWLEGW
Trigger: CCACCCCTCGAGCCAAGGGCAAGGCAAAGCACTAAA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTTAGTGCTTTGCCTTaGCCTTGGCTCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAFSALP*PWLEGW
Trigger: CCACCCCTCGAGCCAAGGGCAAGGCAAAGCACTAAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCTTTAGTGCTTTaGCTTGCCCTTGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSGPLVL*LALGSR
Trigger: CCTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGCGCGCTCCCGCTCTaGCTCGCGATTCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRCALPL*LAILRN
Trigger: ATTCCGGAGAATCGCGAGGCAGAGCGGGAGCGCGCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATTCAAGGTTTCCAGCTaGAAGACATCACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPFKVSS*KTSPST
Trigger: GGTGCTGGGTGATGTCTTGCAGCTGGAAACCTTGAA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGAGTGGCTGCCTCTTaGTTCAAGGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTRVAAS*FKVSSC
Trigger: GCAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGCAGCAAGAGTGGCTaGCTCTTGCTTCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCSKSG*LLLQGF
Trigger: GAAACCTTGAAGCAAGAGGCAGCCACTCTTGCTGCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGCAGCTTGGCTTCCTaGTGGCCTCGCTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSSLAS*WPRSVS
Trigger: GGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTTCTCTTTGGCCTGCTaGTTCAGGCCAGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTFSLAC*FRPASS
Trigger: AGAACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGCTTCTCTTTGGCCTaGTGCTTCAGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCFSLA*CFRPAS
Trigger: ACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAAGCA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGTGCTAGCTGGGCCTaGTTCTCTTTGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSCASWA*FSLACC
Trigger: GCAGCAGGCCAAAGAGAAGCAGGCCCAGCTAGCACA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAACTGCTGCTCCTTCTaGTTCAGGCTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPNCCSF*FRLLLS
Trigger: GCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCTACCTCCTTCAACTaGTGCTCCTTCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLATSFN*CSFCFR
Trigger: CCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGTAGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGCCTAGTTGCCTCCTaGTTCTCCGCTACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCLVAS*FSATSF
Trigger: GAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGATGGTCCTGCCTAGTTaGCTCCTGCTTCTCCGCTAC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRMVLPS*LLLLRY
Trigger: GTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCAT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGCTGGGCATGGTCCTaGCTAGTTGCCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCWAWS*LVASCF
Trigger: GAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCAGCAGTGGCCAGTTaGTGGGCATGGTCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGAAVAS*WAWSCL
Trigger: TAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGGCCTCTCGCTCCTCTaGAGCAGTGGCCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPGLSLL*SSGQLL
Trigger: CAGCAACTGGCCACTGCTGCAGAGGAGCGAGAGGCC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCAGACCGCAGCTaGAACTCTAGCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCSDRS*NSSSAT
Trigger: GGTTGCAGAGCTAGAGTTGCAGCTGCGGTCTGAGCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATTCTCAGTTGCTTTTTaGTGCTCAGACCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPFSVAF*CSDRSC
Trigger: GCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGGCATCTGCAGCCCTaGGCTTCTCCTCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGHLQP*ASPLQG
Trigger: GCCTTGAAGAGGAGAAGCGCAGGGCTGCAGATGCCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACGTTCCCGCTTATGCTaGTCCACCAGGCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRRSRLC*STRLRV
Trigger: GACCCGAAGCCTGGTGGAGCAGCATAAGCGGGAACG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTTTCGTTCCCGCTTATaGTGCTCCACCAGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRFRSRL*CSTRLR
Trigger: CCGAAGCCTGGTGGAGCAGCATAAGCGGGAACGAAA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTACTGTGCCTCCTCTTaGTGGCTATCCTCATACCGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGYCASS*WLSSYR
Trigger: GCGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCATGGCGCCATACTGTaGCTCCTCTTGCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRHGAIL*LLLLAI
Trigger: GATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGTGGGATTCTATGCCTaGCACCTTCTCCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLVGFYA*HLLLCL
Trigger: GAGGCAAAGGAGAAGGTGGCAGGCATAGAATCCCAC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCAGCTAGTTCGTTCTaGTGCCGGCTTATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSASSF*CRLIWS
Trigger: GCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCCTTCTCTTGGACCTaGTGGAGTGCTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSFSWT*WSALAR
Trigger: CCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAAGGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAGTGGAGAGGTCATCTaGAAGCTTCTGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASGEVI*KLLGPD
Trigger: GTCAGGGCCCAGAAGCTTGCAGATGACCTCTCCACT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCTGCTCACCTGCCTTaGGCACCAAGGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGAAHLP*APRSPS
Trigger: GCTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGAGGCTGTTTCCTGCTaGTCACCTGCCTTGCGCACC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGEAVSC*SPALRT
Trigger: GGTGCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACGGGAGGCTGTTTCCTaGTGCTCACCTGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRREAVS*CSPALR
Trigger: GCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTCCCG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAAACTGGCGTCCCTGTTaGTCTTCCAGCCACTCGGGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRNWRPC*SSSHSG
Trigger: GCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCAGCGCTGCCTGTGTaGTGCAGAACTGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPAALPV*CRTGVP
Trigger: AGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCCGTTCCAGCTCATTaGCCATCTGCTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRAVPAH*PSALPP
Trigger: GGGAGGCAGAGCAGATGGGCAATGAGCTGGAACGGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCCACCTCCCTTTCCTaGTGCCCACGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKATSLS*CPRSSC
Trigger: GCAGGAGGAGCGTGGGCAGCAGGAAAGGGAGGTGGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCGCATCTCAAGCTCTaGTCTGGCCGCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPHLKL*SGRLLQ
Trigger: CTGGAGAAGGCGGCCAGAGCAGAGCTTGAGATGCGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCGAACTCCACACGCTaGTCGTTGAGGGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRANSTR*SLRAFC
Trigger: GCAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCAGGGCATGAGCCAGTaGCTCTTGCAGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSQGMSQ*LLQGSE
Trigger: TTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCAACTCCTGGTCCTTaGCTTCCTTTTCCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPTPGP*LPFPSG
Trigger: CCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCTGTTGGCTCTGTCCTaGCAGCAGCCTCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQLLALS*QQPQIG
Trigger: CCCAATCTGAGGCTGCTGGCAGGACAGAGCCAACAG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGCTGCTTCTGGCATTaGTGTTCCAGCTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLCCFWH*CSSLLT
Trigger: GGTGAGCAAGCTGGAACAGCAATGCCAGAAGCAGCA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTGTCAGCCTGCTCCTaGTGCTTCTGGCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAELSACS*CFWHCC
Trigger: ACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGACAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTGTCAGCCTGCTCCTaGTGCTTCTGGCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLSACS*CFWHCC
Trigger: ACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGACAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCCTCTAACTGGCCCTaGAGAGTCTCCAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSSNWP*RVSRAL
Trigger: CAGTGCTCTGGAGACTCTGCAGGGCCAGTTAGAGGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAGGGTGGAGAGGGCCTaGTCTTTCTGGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLRVERA*SFWKNF
Trigger: GAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGTTCGCTCCTGCTCTaGCACCTTCTGCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRCSLLL*HLLPQR
Trigger: CCTCTGCGGCAGAAGGTGGCAGAGCAGGAGCGAACA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCTTACGCATGCTCAGCTGCTCTaGATAGCTGGCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HGDVDDLRGAPTSGAGLTHAQLL*IAGLLC
Trigger: GCAGAGAAGGCCAGCTATGCAGAGCAGCTGAGCATG...CGTAAGACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCATGCTCAGCTGCTCTaGATAGCTGGCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRHAQLL*IAGLLC
Trigger: GCAGAGAAGGCCAGCTATGCAGAGCAGCTGAGCATG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCGCCTTCTTCAGCATaGTCAGCTGCTCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEAPSSA*SAALHS
Trigger: GCTATGCAGAGCAGCTGAGCATGCTGAAGAAGGCGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGCGCCTTCTTCAGCATaGTCAGCTGCTCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRAPSSA*SAALHS
Trigger: GCTATGCAGAGCAGCTGAGCATGCTGAAGAAGGCGC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTTCCAGAAACTaGCGGCCAAGGTTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSTSRN*RPRLAR
Trigger: GCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACTCTGTGCTTCTCGCTaGACCTCAGCCAGACGGGTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRLCASR*TSARRV
Trigger: GACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACCGGGCAGTGCTCTGTaGTTCTCGCTGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPPGSAL*FSLHLS
Trigger: GCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCTTCCTGGAACCGCTaGCTCTCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSSWNR*LSSRTL
Trigger: CAAGGTCCTGGAGGAGAGGCAGCGGTTCCAGGAAGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCCCTCTTCAGTGCCATaGATTCTGTCAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDPSSVP*ILSMIL
Trigger: CAAGATCATTGACAGAATCCATGGCACTGAAGAGGG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCACTGTTCCCAGTCCCTaGGACTTTTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTTVPSP*DFWSSW
Trigger: CCATGAGCTCCAAAAGTCCCAGGGACTGGGAACAGT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGACTGTTCCCAGTCCCTaGGACTTTTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLTVPSP*DFWSSW
Trigger: CCATGAGCTCCAAAAGTCCCAGGGACTGGGAACAGT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGACTGTTCCCAGTCCCTaGGACTTTTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGTVPSP*DFWSSW
Trigger: CCATGAGCTCCAAAAGTCCCAGGGACTGGGAACAGT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCAGGATATCACCCATaGGAGAAGCTGGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAGYHP*EKLENL
Trigger: CAGGTTCTCCAGCTTCTCCCATGGGTGATATCCTGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTCAGCCGTCTCATCTaGAACTGTGGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAFSRLI*NCGVCR
Trigger: CCTGCAGACCCCACAGTTCCAGATGAGACGGCTGAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCTGTCTTCAGGTCCTaGCACTGCTTCAGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSVFRS*HCFRVS
Trigger: TGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACATTTTGCGATCCATCTaGCTCTTCTCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDILRSI*LFSVFR
Trigger: CCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAAT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGGGTTATCCTGCAGCTaGGACAAGTGTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGGLSCS*DKCSSS
Trigger: GCTGGAAGAACACTTGTCCCAGCTGCAGGATAACCC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAACCTCGCCCTTCTCCTaGGGTGGGTTATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRTSPFS*GGLSCS
Trigger: GCTGCAGGATAACCCACCCCAGGAGAAGGGCGAGGT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGCACCTTGCTGGCTTaGTCAGAGTCAGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLCTLLA*SESASF
Trigger: GAAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSAAAPC*LGQSQP
Trigger: TGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCCTTCTGGCTCAACTaGGCTTGCAGTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSFWLN*ACSSFS
Trigger: GCTGAATGAACTGCAAGCCCAGTTGAGCCAGAAGGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGCTGCCTGCTCCTTCTaGCTCAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQAACSF*LNWACS
Trigger: ACTGCAAGCCCAGTTGAGCCAGAAGGAGCAGGCAGC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGATGTCCCATCCCCACCAGATGCCCATGGCTGCTTCACAGCAAACACGTCGCTGCCTGCTCCTTCTaGCTCAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: PRCPIPTRCPWLLHSKHVAACSF*LNWACS
Trigger: ACTGCAAGCCCAGTTGAGCCAGAAGGAGCAGGCAGC...GACGTGTTTGCTGTGAAGCAGCCATGGGCATCTGGTGGGGATGGGACATCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCCTGCTGTAGCTCATaGCCCAGCCGTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLACCSS*PSRSAS
Trigger: TGAAGCTGAACGGCTGGGCCATGAGCTACAGCAGGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGCCTGCTGTAGCTCATaGCCCAGCCGTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSACCSS*PSRSAS
Trigger: TGAAGCTGAACGGCTGGGCCATGAGCTACAGCAGGC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTTCTGTTCAGCCTCCTTaGTCTTCAGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGSVQPP*SSAQPA
Trigger: AGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGA...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCTGTTCAGCCTCCTTaGTCTTCAGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASVQPP*SSAQPA
Trigger: AGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCTGTTCAGCCTCCTTaGTCTTCAGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSVQPP*SSAQPA
Trigger: AGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGCTGCTGGTCTGCATaGGCAACCTGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSCWSA*ATCASR
Trigger: CCTGGAGGCACAGGTTGCCCATGCAGACCAGCAGCT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLASVAT*NLPRSR
Trigger: TCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGCTGGGGCTTAGCCTaGGGCTCACGGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESWGLA*GSRLFK
Trigger: TTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTAGCTGGGGCTTAGCCTaGGGCTCACGGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGSWGLA*GSRLFK
Trigger: TTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCT...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRILKSS*GLAWGS
Trigger: TGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTAT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGILKSS*GLAWGS
Trigger: TGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTAT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACGCTGGTGCCGTCTaGCTGGGTACGAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPDAGAV*LGTRQL
Trigger: AAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACCAGGGATTCTACCTTaGGGGGCAGGCGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPPGILP*GAGAGR
Trigger: TCTCCCAGCGCCTGCCCCCCAAGGTAGAATCCCTGG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCTCGCAGGCTAGCCTaGGAAGCAGGAGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKARRLA*EAGADR
Trigger: GCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACAGAACTGCGAGTGGTaGGGCGGTAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRQNCEW*GGSQAS
Trigger: GCTTGCCTGGCTACCGCCCCACCACTCGCAGTTCTG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACAGAACTGCGAGTGGTaGGGCGGTAGCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPQNCEW*GGSQAS
Trigger: GCTTGCCTGGCTACCGCCCCACCACTCGCAGTTCTG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCAGAACTGCGAGTaGTGGGGCGGTAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPEQNCE*WGGSQA
Trigger: TGCCTGGCTACCGCCCCACCACTCGCAGTTCTGCTC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACTGGACACCCCGGCCTaGGAACGACGAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRLDTPA*ERRAEL
Trigger: CAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGAAGCTGTTCCTTCCTaGAGGGGCCCCACTGGACAC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGEAVPS*RGPTGH
Trigger: GTGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGTGCCCTCGGCTATCTaGATTGGCTGCATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQVPSAI*IGCMLA
Trigger: AGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCAC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGTGCCCTCGGCTATCTaGATTGGCTGCATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLVPSAI*IGCMLA
Trigger: AGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCAC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGTGCCCTCGGCTATCTaGATTGGCTGCATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSVPSAI*IGCMLA
Trigger: AGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCAC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGAGTTCCAGGGCCCTaGTGGGGCTCTAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGVPGP*WGSRET
Trigger: GGTCTCCCTAGAGCCCCACCAGGGCCCTGGAACTCC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTGAAFF*ASVVLC
Trigger: ACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLGAAFF*ASVVLC
Trigger: ACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQFHCEC*GKPWTG
Trigger: CCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCTTTGCCTTGCCCTTaGCTCGAGGGGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGALPCP*LEGWHQ
Trigger: TTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGGTGGGGCCACTCACTaGTACTGGCCCTTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLGGATH*YWPFSA
Trigger: AGCACTAAAGGGCCAGTACCAGTGAGTGGCCCCACC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGGTGGGGCCACTCACTaGTACTGGCCCTTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQGGATH*YWPFSA
Trigger: AGCACTAAAGGGCCAGTACCAGTGAGTGGCCCCACC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGGTCAGACCCAGTCCTaGACTTCAAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLGQTQS*TSRVRA
Trigger: GGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCACTCCAGACTCCTaGTGGAAGCCTCCACACACT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCTPDS*WKPPHT
Trigger: AGTGTGTGGAGGCTTCCACCAGGAGTCTGGAGTGCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358965.10
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGTTTGCAGCAAGAGTaGCTGCCTCTTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCLQQE*LPLASR
Trigger: CCTTGAAGCAAGAGGCAGCCACTCTTGCTGCAAACA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGCTTGGCTTCCTGCTaGCCTCGCTCAGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSLASC*PRSVSS
Trigger: GCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGCTCTTCCTTGGCCTaGCTGAGGTTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESSSLA*LRLEME
Trigger: CTCCATCTCCAACCTCAGCCAGGCCAAGGAAGAGCT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCCTGTTCTTGCTGTTaGAGGGTCTGTGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEACSCC*RVCASW
Trigger: CCAGCTAGCACAGACCCTCCAACAGCAAGAACAGGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCCTGTTCTTGCTGTTaGAGGGTCTGTGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAACSCC*RVCASW
Trigger: CCAGCTAGCACAGACCCTCCAACAGCAAGAACAGGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCAGTGGCCAGTTGCTaGGCATGGTCCTGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAVASC*AWSCLV
Trigger: AACTAGGCAGGACCATGCCCAGCAACTGGCCACTGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGCTGCTCCTGGAGCTaGTCCTTCTCCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSCSWS*SFSWAT
Trigger: GGTGGCCCAGGAGAAGGACCAGCTCCAGGAGCAGCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGTGCCTCCTCTTGCTaGCTATCCTCATACCGCTCA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLCASSC*LSSYRS
Trigger: TGAGCGGTATGAGGATAGCCAGCAAGAGGAGGCACA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCTGTTCCTGGAACATaGCGCCATACTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAAVPGT*RHTVPP
Trigger: AGGAGGCACAGTATGGCGCCATGTTCCAGGAACAGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGCTGCCGGCTTATCTaGAGCTCGCTGTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKACCRLI*SSLWDS
Trigger: AGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTGGCCAGGTTGGCATaGAGCTCAGCTAGTTCGTTC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAELARLA*SSASSF
Trigger: GAACGAACTAGCTGAGCTCCATGCCAACCTGGCCAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGTGCTCTGGCCAGGTTaGCATGGAGCTCAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRVLWPG*HGAQLV
Trigger: AACTAGCTGAGCTCCATGCCAACCTGGCCAGAGCAC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGGGCCACCTCTTTGCTaGTGGCAGCCATCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRGPPLC*WQPSFP
Trigger: AGGAAAAGATGGCTGCCACCAGCAAAGAGGTGGCCC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCCAGCTCTTTTATCTaGGCTGCCTCCAGACCACGA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSSSFI*AASRPR
Trigger: TCGTGGTCTGGAGGCAGCCCAGATAAAAGAGCTGGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACAGCTTGGGGCCTGTTaGCTCTGTCCTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRQLGAC*LCPASS
Trigger: GCTGCTGGCAGGACAGAGCCAACAGGCCCCAAGCTG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTGTGCCCTAGCTCCTaGGCCTTCTCCTCTAACTGG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLCPSS*AFSSNW
Trigger: CCAGTTAGAGGAGAAGGCCCAGGAGCTAGGGCACAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCAGCCAACTCCCGTTaGGCCGAGGCTAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAANSR*AEAKAL
Trigger: GAGTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCGGCCCCGGGCCACCTaGGCCTTCCACTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKRPRAT*AFHSSS
Trigger: TGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCCTTCTCCAGGACCTaGCGATTCAGGATGGACACC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSFSRT*RFRMDT
Trigger: GGTGTCCATCCTGAATCGCCAGGTCCTGGAGAAGGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCTCTGGCACTGTTGCTaGCTGTCTCTGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQLWHCC*LSLPAA
Trigger: TGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTCTGGCACTGTTGCTaGCTGTCTCTGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLWHCC*LSLPAA
Trigger: TGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGCGTTCTGCAGCTCTaGCACTGTTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAECVLQL*HCCWLS
Trigger: AGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCGTTCTGCAGCTCTaGCACTGTTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCVLQL*HCCWLS
Trigger: AGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAGGGCCTGCTCTTTCTaGAAGAACTTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLRACSF*KNFSCH
Trigger: GTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCTCGAGCTGCAGGGTaGAGAGGGCCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRARAAG*RGPALS
Trigger: AGAAAGAGCAGGCCCTCTCCACCCTGCAGCTCGAGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCCAGCTCCTCACGGTaGCGTTTCTCGGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSSSSR*RFSAAA
Trigger: GGCCGCTGCCGAGAAACGCCACCGTGAGGAGCTGGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCTGCTCTGCATAGCTaGCCTTCTCTGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGAALHS*PSLPAA
Trigger: AGCTGCGGGCAGAGAAGGCCAGCTATGCAGAGCAGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTACTTCTCCCGGGCCTaGTCCAACTCCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRYFSRA*SNSTSR
Trigger: TCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGACGGCTGCCAACTCTTaGACATACTTCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQTAANS*TYFSRA
Trigger: GGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTCAGTTCTTCCACCTaGGCAGTGAGTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLSSST*AVSFCL
Trigger: GAGGCAGAAACTCACTGCCCAGGTGGAAGAACTGAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTTGGTCATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCAATGTCGTCCTGCTTaGCGAGCCCAATCACCAAGC +
Preference number: 4 (lower is better)
Translates to: LGHGDVDDLRGAPTSGAGQCRPA*RAQSPS
Trigger: GCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTG...ACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAHTRTG*SPAVWL
Trigger: AAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEHTRTG*SPAVWL
Trigger: AAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGGAGTGTCATCTTGGTaGTGCCAGACAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEGVSSW*CQTVTP
Trigger: TGGAGTGACTGTCTGGCATCACCAAGATGACACTCC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAGAAGCTGGAGAACCTaGGAGAAAGTTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPRSWRT*EKVVPT
Trigger: AGTGGGAACAACTTTCTCTCAGGTTCTCCAGCTTCT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGTGCATCCTTCTCGGTaGGGAGCTTGCGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRVHPSR*GACGSQ
Trigger: CTGAGAACCGCAAGCTCCTCACCGAGAAGGATGCAC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGTGCATCCTTCTCGGTaGGGAGCTTGCGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGVHPSR*GACGSQ
Trigger: CTGAGAACCGCAAGCTCCTCACCGAGAAGGATGCAC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCGTGCTGTAGAACGATaGGTTGGCGCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGRAVER*VGAVWL
Trigger: GAGCCAGACAGCGCCAACTCATCGTTCTACAGCACG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACGTGCTGTAGAACGATaGGTTGGCGCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRRAVER*VGAVWL
Trigger: GAGCCAGACAGCGCCAACTCATCGTTCTACAGCACG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAAGGCGAGCTAGAGACTaGGTAGAGGAGGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRRRARD*VEEVAR
Trigger: GCGAGCCACCTCCTCTACTCAGTCTCTAGCTCGCCT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCAAGCTGAGCAGGGCTaGGTTGCCATAATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQQAEQG*VAIIGR
Trigger: TCTCCCGATTATGGCAACTCAGCCCTGCTCAGCTTG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGCCCACAAGCTGAGCAGGGCTaGGTTGCCATAATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PPSHERGHNPMSSCLASPQAEQG*VAIIGR
Trigger: TCTCCCGATTATGGCAACTCAGCCCTGCTCAGCTTG...TGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCAAGCTGAGCAGGGCTaGGTTGCCATAATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSQAEQG*VAIIGR
Trigger: TCTCCCGATTATGGCAACTCAGCCCTGCTCAGCTTG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGCAGGAGAATCGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358965.10
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGGCCAGCCAGTTCTTaGTCCTGTTGCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSRPASS*SCCWMV
Trigger: CACCATCCAGCAACAGGATCAAGAACTGGCTGGCCT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCTTCAAGGACTCTTTaGGGGCCTGGAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPSRTL*GPGAAP
Trigger: AGGAGCAGCTCCAGGCCCTCAAAGAGTCCTTGAAGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCAGCTACTTCTTTaGCGAGCTGCTCACACTCAC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGRQLLL*RAAHTH
Trigger: GTGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACTGCCGCAGGTTCTCTaGAGCCACCCGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRLPQVL*SHPLFL
Trigger: GAGAAACAGCGGGTGGCTTCAGAGAACCTGCGGCAG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKALSDTG*FKICCP
Trigger: GGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLSDTG*FKICCP
Trigger: GGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTTTTCTGCAGAAAACTaGACACAAAGTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAFSAEN*TQSPVS
Trigger: AGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAAAA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGGAACTGTGGGGTCTaGAGGATATCACCCATGGGA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEWNCGV*RISPMG
Trigger: TCCCATGGGTGATATCCTGCAGACCCCACAGTTCCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGGAACTGTGGGGTCTaGAGGATATCACCCATGGGA +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRWNCGV*RISPMG
Trigger: TCCCATGGGTGATATCCTGCAGACCCCACAGTTCCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGGCGGTCAATGCGCTaGTGCATCATGGCTATCTGT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAERRSMR*CIMAIC
Trigger: ACAGATAGCCATGATGCAGCAGCGCATTGACCGCCT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAGGCGGTCAATGCGCTaGTGCATCATGGCTATCTGT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRRRSMR*CIMAIC
Trigger: ACAGATAGCCATGATGCAGCAGCGCATTGACCGCCT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGCTTCAGGGTTTCATaGAGCCGCATGGTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCFRVS*SRMVRL
Trigger: GAGCCTTACCATGCGGCTGCATGAAACCCTGAAGCA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGCTTCAGGGTTTCATaGAGCCGCATGGTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAECFRVS*SRMVRL
Trigger: GAGCCTTACCATGCGGCTGCATGAAACCCTGAAGCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTTCAGGTCCTGGCACTaGTTCAGGGTTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGFRSWH*FRVSCS
Trigger: GCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGGGGTGGGTTATCCTaGAGCTGGGACAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRWGGLS*SWDKCS
Trigger: AGAACACTTGTCCCAGCTGCAGGATAACCCACCCCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCTGCTGCTGCACCTTaGTGGCTTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSAAAP*WLGQSQ
Trigger: CTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCTGCTGCTGCACCTTaGTGGCTTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSAAAP*WLGQSQ
Trigger: CTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCTGCTGCTGCACCTTaGTGGCTTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSAAAP*WLGQSQ
Trigger: CTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGGCTCAACTGGGCTTaGAGTTCATTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQWLNWA*SSFSWA
Trigger: GGCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGGCTCAACTGGGCTTaGAGTTCATTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLWLNWA*SSFSWA
Trigger: GGCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLIVLS*LLLLAQ
Trigger: TTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCAGGCTCCGCAGCTaGTCCTGCAGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSRLRS*SCSSWF
Trigger: GAACCAAGAGCTGCAGGAGCAGCTGCGGAGCCTGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ATAGTCGGTCTCCAATGGGCCTTCCTGGCCTCACATCTCAGCTTAGTCAGGCTCTCCAGGCTCCGCAGCTaGTCCTGCAGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: IVGLQWAFLASHLSLVRLSRLRS*SCSSWF
Trigger: GAACCAAGAGCTGCAGGAGCAGCTGCGGAGCCTGGA...GAGCCTGACTAAGCTGAGATGTGAGGCCAGGAAGGCCCATTGGAGACCGACTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGTCTTCAGCCCAGCCTaGTGTAGCTCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRVFSPA*CSSWPS
Trigger: GCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGAC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGCATGGGCAACCTGTaGCTCCAGGCTGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKCMGNL*LQAAHL
Trigger: CAGGTGCGCAGCCTGGAGGCACAGGTTGCCCATGCA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACCCAGGTCTCGAAGCTaGTGGTCTGCATGGGCAACC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRPRSRS*WSAWAT
Trigger: GGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKALPPGI*PGLEAA
Trigger: AGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLPPGI*PGLEAA
Trigger: AGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGVMLMI*VVRRRA
Trigger: CGCTCGTCGGCGCACCACGCAGATCATCAACATCAC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACAGGAGCAGACCGCGTaGTGTAGAACGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLQEQTA*CRTMSW
Trigger: CCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGATGTCCCATCCCCACCAGATGCCCATGGCTGCTTCACAGCAAACACGTCCAGGAGCAGACCGCGTaGTGTAGAACGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PRCPIPTRCPWLLHSKHVQEQTA*CRTMSW
Trigger: CCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTG...GACGTGTTTGCTGTGAAGCAGCCATGGGCATCTGGTGGGGATGGGACATCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGAHPGK*PCRSCS
Trigger: GGAACAGCTTCTACATGGGCACTTGCCAGGATGAGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCTTACGTTCCAGTCATCCAGCTaGTCAGGCTCATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HGDVDDLRGAPTSGAGLTFQSSS*SGSSWQ
Trigger: TTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAA...CGTAAGACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTTCCAGTCATCCAGCTaGTCAGGCTCATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGFQSSS*SGSSWQ
Trigger: TTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCTGCAGCTCTGCAATaGGGTTCCAGTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAAALQ*GSSHPA
Trigger: AGCTGGATGACTGGAACCGCATTGCAGAGCTGCAGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCGCTGCTGCAGCTCTaGAATGCGGTTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGALLQL*NAVPVI
Trigger: GATGACTGGAACCGCATTGCAGAGCTGCAGCAGCGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTACTCGATTGCGCTGCTaGAGCTCTGCAATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSTRLRC*SSAMRF
Trigger: GAACCGCATTGCAGAGCTGCAGCAGCGCAATCGAGT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGACTCGATTGCGCTGCTaGAGCTCTGCAATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQTRLRC*SSAMRF
Trigger: GAACCGCATTGCAGAGCTGCAGCAGCGCAATCGAGT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACACACTCGATTGCGCTaGTGCAGCTCTGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRHTRLR*CSSAMR
Trigger: CCGCATTGCAGAGCTGCAGCAGCGCAATCGAGTGTG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCACACTCGATTGCGCTaGTGCAGCTCTGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGHTRLR*CSSAMR
Trigger: CCGCATTGCAGAGCTGCAGCAGCGCAATCGAGTGTG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGGGGCACACTCGATTaGGCTGCTGCAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRGGTLD*AAAALQ
Trigger: TTGCAGAGCTGCAGCAGCGCAATCGAGTGTGCCCCC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTATCTGGATTGGCTaGATGCTGGCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAIWIG*MLARRR
Trigger: CCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGACCCGTTTGCGCTGCTaGCGGGTGGTGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKTRLRC*RVVMPV
Trigger: CACTGGCATCACCACCCGGCAGCAGCGCAAACGGGT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGAGACCCGTTTGCGCTaGTGCCGGGTGGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKETRLR*CRVVMP
Trigger: TGGCATCACCACCCGGCAGCAGCGCAAACGGGTCTC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGTAGAAGCTGGAGCTaGTTTCTTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSRSWS*FLLGLS
Trigger: ACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTTTAGTGCTTTGCCTTaGCCTTGGCTCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQFSALP*PWLEGW
Trigger: CCACCCCTCGAGCCAAGGGCAAGGCAAAGCACTAAA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATTTAGTGCTTTGCCTTaGCCTTGGCTCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLFSALP*PWLEGW
Trigger: CCACCCCTCGAGCCAAGGGCAAGGCAAAGCACTAAA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGCCCTTTAGTGCTTTaGCTTGCCCTTGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGPLVL*LALGSR
Trigger: CCTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGGCCCTTTAGTGCTTTaGCTTGCCCTTGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRGPLVL*LALGSR
Trigger: CCTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTTCAAGGTTTCCAGCTaGAAGACATCACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGFKVSS*KTSPST
Trigger: GGTGCTGGGTGATGTCTTGCAGCTGGAAACCTTGAA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGAGCTGTGTGTTGTTTaGAGCAAGAGTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRELCVV*SKSGCL
Trigger: GAGGCAGCCACTCTTGCTGCAAACAACACACAGCTC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAGGCTAGACAGCTGCTaGTTTTCTTCTTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPRLDSC*FSSSKW
Trigger: CCACTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTTGGAGATGGAGCTCTaGAGGTCAGTGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLLEMEL*RSVIRL
Trigger: TAGCCTGATCACTGACCTGCAGAGCTCCATCTCCAA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGGGAGGCCTGTTCTTaGTGTTGGAGGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLWEACS*CWRVCA
Trigger: AGCACAGACCCTCCAACAGCAAGAACAGGCCTCCCA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGGCTACTGCTTAGCTaGTCCACCTGGTGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPRLLLS*STWWRR
Trigger: CCTCCGCCACCAGGTGGAGCAGCTAAGCAGTAGCCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCTACCTCCTTCAACTaGTGCTCCTTCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGATSFN*CSFCFR
Trigger: CCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGTAGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGCCTAGTTGCCTCCTaGTTCTCCGCTACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSCLVAS*FSATSF
Trigger: GAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGCCTAGTTGCCTCCTaGTTCTCCGCTACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCLVAS*FSATSF
Trigger: GAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTATGGTCCTGCCTAGTTaGCTCCTGCTTCTCCGCTAC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSMVLPS*LLLLRY
Trigger: GTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCAT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGCTGGGCATGGTCCTaGCTAGTTGCCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRCWAWS*LVASCF
Trigger: GAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCAGTTGCTTTTTGCTaGTCAGACCGCAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSVAFC*SDRSCN
Trigger: GTTGCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGAGATACAACGCTGCTaGTCTTCCAGGGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEEIQRC*SSRASA
Trigger: TGCAGATGCCCTGGAAGAGCAGCAGCGTTGTATCTC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATTTCGTTCCCGCTTATaGTGCTCCACCAGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLFRSRL*CSTRLR
Trigger: CCGAAGCCTGGTGGAGCAGCATAAGCGGGAACGAAA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGGGCCTCCCCAAGCTaGTGTAATCGAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPWASPS*CNRASS
Trigger: GCTGGAGGCTCGATTACAGCAGCTTGGGGAGGCCCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCACTCTCAGCTGTGTaGTGGGCAGCCATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSLSAV*WAAMAS
Trigger: AGAGGCCATGGCTGCCCAGCACACAGCTGAGAGTGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCATGGCGCCATACTGTaGCTCCTCTTGCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQHGAIL*LLLLAI
Trigger: GATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGTGGGATTCTATGCCTaGCACCTTCTCCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEVGFYA*HLLLCL
Trigger: GAGGCAAAGGAGAAGGTGGCAGGCATAGAATCCCAC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCAGCTAGTTCGTTCTaGTGCCGGCTTATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSASSF*CRLIWS
Trigger: GCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATTGGACCTGCTGGAGTaGTCTGGCCAGGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRLDLLE*SGQVGM
Trigger: CATGCCAACCTGGCCAGAGCACTCCAGCAGGTCCAA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGCGGGCCACCTCTTTaGTGGTGGCAGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSGPPL*WWQPSF
Trigger: AAAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCGCTGCCTGTGTGCTaGAGAACTGGCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRALPVC*RTGVPV
Trigger: AACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCGTTGAGGGCGTTCTaGAGCCGCATCTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSLRAF*SRISSS
Trigger: AGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCCAACTCCTGGTCCTTaGCTTCCTTTTCCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQPTPGP*LPFPSG
Trigger: CCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCTGTTGGCTCTGTCCTaGCAGCAGCCTCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLLALS*QQPQIG
Trigger: CCCAATCTGAGGCTGCTGGCAGGACAGAGCCAACAG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCAGCCTGCTCCTGCTaGTTCTGGCATTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSACSC*FWHCCS
Trigger: GGAACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCCTCTAACTGGCCCTaGAGAGTCTCCAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSSNWP*RVSRAL
Trigger: CAGTGCTCTGGAGACTCTGCAGGGCCAGTTAGAGGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGTCTTGTACCTTGGTaGGGAAGGCAGCCAACTCCC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGLVPW*GRQPTP
Trigger: GGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAGGGTGGAGAGGGCCTaGTCTTTCTGGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKARVERA*SFWKNF
Trigger: GAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAGGGTGGAGAGGGCCTaGTCTTTCTGGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRRVERA*SFWKNF
Trigger: GAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCCTGTGTGCTGGTGTaGTCGAGCTGCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKACVLV*SSCRVE
Trigger: CTCCACCCTGCAGCTCGAGCACACCAGCACACAGGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATCACCAGGGCCTGTGTaGTGGTGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSPGPV*WCARAA
Trigger: TGCAGCTCGAGCACACCAGCACACAGGCCCTGGTGA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGCGCCTTCTTCAGCATaGTCAGCTGCTCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQAPSSA*SAALHS
Trigger: GCTATGCAGAGCAGCTGAGCATGCTGAAGAAGGCGC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCACTTCCAGAAACTaGCGGCCAAGGTTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSTSRN*RPRLAR
Trigger: GCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCAGCTCCCGGGCAGTaGTCTGTGCTTCTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPAPGQ*SVLLAA
Trigger: TGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCAGGATATCACCCATaGGAGAAGCTGGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEAGYHP*EKLENL
Trigger: CAGGTTCTCCAGCTTCTCCCATGGGTGATATCCTGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCTCATCTGGAACTGTaGGGTCTGCAGGATATCACC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSHLEL*GLQDIT
Trigger: GGTGATATCCTGCAGACCCCACAGTTCCAGATGAGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCTCATCTGGAACTGTaGGGTCTGCAGGATATCACC +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSHLEL*GLQDIT
Trigger: GGTGATATCCTGCAGACCCCACAGTTCCAGATGAGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTTCAGCCGTCTCATCTaGAACTGTGGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSFSRLI*NCGVCR
Trigger: CCTGCAGACCCCACAGTTCCAGATGAGACGGCTGAA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCTGTCTTCAGGTCCTaGCACTGCTTCAGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSVFRS*HCFRVS
Trigger: TGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCTGTCTTCAGGTCCTaGCACTGCTTCAGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSVFRS*HCFRVS
Trigger: TGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGGGTTATCCTGCAGCTaGGACAAGTGTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAGLSCS*DKCSSS
Trigger: GCTGGAAGAACACTTGTCCCAGCTGCAGGATAACCC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGCACCTTGCTGGCTTaGTCAGAGTCAGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAECTLLA*SESASF
Trigger: GAAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGCACCTTGCTGGCTTaGTCAGAGTCAGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCTLLA*SESASF
Trigger: GAAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGCACCTTGCTGGCTTaGTCAGAGTCAGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKACTLLA*SESASF
Trigger: GAAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGAAAPC*LGQSQP
Trigger: TGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRAAAPC*LGQSQP
Trigger: TGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCCTTCTGGCTCAACTaGGCTTGCAGTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSFWLN*ACSSFS
Trigger: GCTGAATGAACTGCAAGCCCAGTTGAGCCAGAAGGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAACCTGGGCAGTAAGGTaGCGGCAGGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRTWAVR*RQVCSA
Trigger: GGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAAGCTGCTGGTCTGCATaGGCAACCTGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSCWSA*ATCASR
Trigger: CCTGGAGGCACAGGTTGCCCATGCAGACCAGCAGCT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGCTGCTGGTCTGCATaGGCAACCTGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSCWSA*ATCASR
Trigger: CCTGGAGGCACAGGTTGCCCATGCAGACCAGCAGCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAGGTCTCGAAGCTGCTaGTCTGCATGGGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQRSRSC*SAWATC
Trigger: ACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAAGGTCTCGAAGCTGCTaGTCTGCATGGGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLRSRSC*SAWATC
Trigger: ACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTCAGGCCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGGTCTCGAAGCTGCTaGTCTGCATGGGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: LRPPSHERGHNPMSSCLARSRSC*SAWATC
Trigger: ACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCT...CGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGGTCTCGAAGCTGCTaGTCTGCATGGGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSRSRSC*SAWATC
Trigger: ACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAASVAT*NLPRSR
Trigger: TCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGTTCTCCAGGGACGCTaGTGCCGTCTGGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKVLQGR*CRLAGY
Trigger: GTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAAC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGTAGAACGATGAGTTaGCGCTGTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGCRTMS*RCLALP
Trigger: TGGAAGAGCCAGACAGCGCCAACTCATCGTTCTACA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCTGGACACCCCGGCCTaGGAACGACGAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKLDTPA*ERRAEL
Trigger: CAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAAGCTGTTCCTTCCTaGAGGGGCCCCACTGGACAC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPEAVPS*RGPTGH
Trigger: GTGTCCAGTGGGGCCCCTCCAGGAAGGAACAGCTTC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACGGCGCAGGGTCTCTTaGGGGTCTCCAGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRRRRVS*GSPVFI
Trigger: GATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGATTGGCTGCATGCTaGCTCGGCGCAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRGLAAC*LGAGSL
Trigger: AAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTCGGCTATCTGGATTaGCTGCATGCTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLGYLD*LHAGSA
Trigger: CGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCTGAAGGCCATCGACTaGCGCCGGTCAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLKAID*RRSACL
Trigger: TAAACAGGCTGACCGGCGCCAGTCGATGGCCTTCAG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACTGAAGGCCATCGACTaGCGCCGGTCAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRLKAID*RRSACL
Trigger: TAAACAGGCTGACCGGCGCCAGTCGATGGCCTTCAG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGFHCEC*GKPWTG
Trigger: CCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCTTTGCCTTGCCCTTaGCTCGAGGGGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPALPCP*LEGWHQ
Trigger: TTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGTGGGGCCACTCACTaGTACTGGCCCTTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGGATH*YWPFSA
Trigger: AGCACTAAAGGGCCAGTACCAGTGAGTGGCCCCACC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGGTGGGGCCACTCACTaGTACTGGCCCTTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRGGATH*YWPFSA
Trigger: AGCACTAAAGGGCCAGTACCAGTGAGTGGCCCCACC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGGCTACTGTTGGCCTaGGAGCTGAGAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQWLLLA*ELREGT
Trigger: AGTGCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGGCCTACTCCTCTTATaGTCCCTTCTAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGGLLLL*SLLDPE
Trigger: CTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGGAAAGAGCATCCTCTaGCAGGTGCTCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRGKSIL*QVLPPG
Trigger: ACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGCTTGGCTTCCTGCTaGCCTCGCTCAGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSLASC*PRSVSS
Trigger: GCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTCAGCAAGCAGCTTaGCTTCCTGCTGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAQQAA*LPAGLA
Trigger: AGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAGCTCTTCCTTGGCCTaGCTGAGGTTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSSSLA*LRLEME
Trigger: CTCCATCTCCAACCTCAGCCAGGCCAAGGAAGAGCT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCAGTGGCCAGTTGCTaGGCATGGTCCTGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRAVASC*AWSCLV
Trigger: AACTAGGCAGGACCATGCCCAGCAACTGGCCACTGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGCAGAATCTCCAGCTTaGCAGCCTTCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRAESPA*QPSPSP
Trigger: TGGAGAAGGAGAAGGCTGCCAAGCTGGAGATTCTGC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGTCTCAACACAGGCCTaGAGTTCCTCCACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGVSTQA*SSSTFR
Trigger: CCGGAAGGTGGAGGAACTCCAGGCCTGTGTTGAGAC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCTGTTCCTGGAACATaGCGCCATACTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAVPGT*RHTVPP
Trigger: AGGAGGCACAGTATGGCGCCATGTTCCAGGAACAGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGCTGCCGGCTTATCTaGAGCTCGCTGTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCCRLI*SSLWDS
Trigger: AGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGTGCTCTGGCCAGGTTaGCATGGAGCTCAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQVLWPG*HGAQLV
Trigger: AACTAGCTGAGCTCCATGCCAACCTGGCCAGAGCAC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCATCTGCAAGCTTCTaGGCCCTGACTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSSASF*ALTSFS
Trigger: AGAGAAGGAAGTCAGGGCCCAGAAGCTTGCAGATGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCTTTTCCTGCAGAGTaGAGAGGTCATCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSFPAE*RGHLQA
Trigger: AGCTTGCAGATGACCTCTCCACTCTGCAGGAAAAGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGGGCCACCTCTTTGCTaGTGGCAGCCATCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQGPPLC*WQPSFP
Trigger: AGGAAAAGATGGCTGCCACCAGCAAAGAGGTGGCCC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGGCCACCTCTTTGCTaGTGGCAGCCATCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSGPPLC*WQPSFP
Trigger: AGGAAAAGATGGCTGCCACCAGCAAAGAGGTGGCCC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCTCAAGCTCTGCTCTaGCCGCCTTCTCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSQALL*PPSPGQ
Trigger: TTGCCCTGGAGAAGGCGGCCAGAGCAGAGCTTGAGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCAGACCACGAAGCTTaGCCAACTCCTGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPDHEA*PTPGPC
Trigger: GCAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCCAGCTCTTTTATCTaGGCTGCCTCCAGACCACGA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKASSSFI*AASRPR
Trigger: TCGTGGTCTGGAGGCAGCCCAGATAAAAGAGCTGGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACCAGCAGCCTCAGATTaGGCTCCTGAGCCAGATGCG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRPAASD*APEPDA
Trigger: CGCATCTGGCTCAGGAGCCCAATCTGAGGCTGCTGG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACCAGCAGCCTCAGATTaGGCTCCTGAGCCAGATGCG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPPAASD*APEPDA
Trigger: CGCATCTGGCTCAGGAGCCCAATCTGAGGCTGCTGG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCAGCTTGGGGCCTGTTaGCTCTGTCCTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKQLGAC*LCPASS
Trigger: GCTGCTGGCAGGACAGAGCCAACAGGCCCCAAGCTG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCTGCTGCTTCTaGCATTGCTGTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCSCCF*HCCSSL
Trigger: CAAGCTGGAACAGCAATGCCAGAAGCAGCAGGAGCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGCTCCTGCTGCTTCTaGCATTGCTGTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCSCCF*HCCSSL
Trigger: CAAGCTGGAACAGCAATGCCAGAAGCAGCAGGAGCA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCTGTGCCCTAGCTCCTaGGCCTTCTCCTCTAACTGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLCPSS*AFSSNW
Trigger: CCAGTTAGAGGAGAAGGCCCAGGAGCTAGGGCACAG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCAGCCAACTCCCGTTaGGCCGAGGCTAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKAANSR*AEAKAL
Trigger: GAGTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGTGGTCTTGTACCTTaGTGCGGAAGGCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAECGLVP*CGRQPT
Trigger: AGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACACGCCTTCAATTCTTaGCCCAGCTCCTCCGCACGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRHAFNS*PSSSAR
Trigger: GCGTGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCTCGAGCTGCAGGGTaGAGAGGGCCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPARAAG*RGPALS
Trigger: AGAAAGAGCAGGCCCTCTCCACCCTGCAGCTCGAGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCGGCCTGCAGCTGCTaGCAGAGGTGCTTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSACSC*QRCLAG
Trigger: GCCAGCTAAGCACCTCTGCCAGCAGCTGCAGGCCGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCACGGCTGCCAACTCTTaGACATACTTCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGTAANS*TYFSRA
Trigger: GGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTCAGTTCTTCCACCTaGGCAGTGAGTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLSSST*AVSFCL
Trigger: GAGGCAGAAACTCACTGCCCAGGTGGAAGAACTGAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAATCGTACCTCTTCGTaGGCTCGCGCCAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPNRTSS*ARASAV
Trigger: CACAGCGCTGGCGCGAGCCCACGAAGAGGTACGATT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393695.8
ENST00000613205.4
3UTR CAA 72 bp GGCTCTTCCACATCTAGCTTCTTGGTCATGGTGATGTaGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GSSTSSFLVMVM*MICVVRRRAER
Trigger: CCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATGACCAAGAAGCTAGATGTGGAAGAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSHTRTG*SPAVWL
Trigger: AAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCCTCCGAAAGCTGGTTaGTTTTGCGATCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSPPKAG*FCDPSG
Trigger: GCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACCTCCGAAAGCTGGTTaGTTTTGCGATCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLPPKAG*FCDPSG
Trigger: GCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACCTCCGTCAGCTCATTaGGGGCATCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPPPSAH*GHPVAA
Trigger: AGCAGCTACAGGATGCCCTCAATGAGCTGACGGAGG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGTGAAAGTTTTCCCTaGAGGATTTCGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDCESFP*RISFFS
Trigger: AGAGAAGAACGAAATCCTTCAGGGAAAACTTTCACA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CAGCTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCGCGCTGGGAGATAGGTaGGGCTGGTTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QLAMERKPAEVQSFTLEGALGDR*GWFSRD
Trigger: GTCCCTGGAGAACCAGCCTCACCTATCTCCCAGCGC...GCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACGTGCTGTAGAACGATaGGTTGGCGCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRRAVER*VGAVWL
Trigger: GAGCCAGACAGCGCCAACTCATCGTTCTACAGCACG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATCATCTCCTCATCTGTaGTGGTGCCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSSPHL*WCPGSG
Trigger: CCCTGAGCCTGGGCACCATCACAGATGAGGAGATGA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGTTGGCCTGGGAGCTaGGAGAAGGCACTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKCWPGS*EKALRG
Trigger: CCCTCTCAGTGCCTTCTCTCAGCTCCCAGGCCAACA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATTTTCCGTCAGGGCATaGGCCAGTGCCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPFSVRA*ASASCR
Trigger: CCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTCAGATTGGGCTCCTaGGCCAGATGCGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLRLGS*ARCVLL
Trigger: AAGGAGCACGCATCTGGCTCAGGAGCCCAATCTGAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACTTCCACCTGGGCAGTaGGTTTCTGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRLPPGQ*VSASLP
Trigger: AGGAAGAGAGGCAGAAACTCACTGCCCAGGTGGAAG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTCCACCTGGGCAGTaGGTTTCTGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAPPGQ*VSASLP
Trigger: AGGAAGAGAGGCAGAAACTCACTGCCCAGGTGGAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393695.8
CDS-3UTR TCA 90 bp CATGGTGATGTTGATGATCTGCGTGGTGCGCCGACGAGCGGAGCGGGTCTTACGAATCACCAAGCTTCCTaGACAGCTCCTAACCACACC +
Preference number: 4 (lower is better)
Translates to: HGDVDDLRGAPTSGAGLTNHQAS*TAPNHT
Trigger: GGTGTGGTTAGGAGCTGTTCAGGAAGCTTGGTGATT...CGTAAGACCCGCTCCGCTCGTCGGCGCACCACGCAGATCATCAACATCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLSDTG*FKICCP
Trigger: GGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTCTCATCAGCAAGCTaGTTCTTCAGCCGTCTCATC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLSSAS*FFSRLI
Trigger: GATGAGACGGCTGAAGAAGCAGCTTGCTGATGAGAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTCTCATCAGCAAGCTaGTTCTTCAGCCGTCTCATC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLSSAS*FFSRLI
Trigger: GATGAGACGGCTGAAGAAGCAGCTTGCTGATGAGAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCGGTCAATGCGCTGCTaGATCATGGCTATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQRSMRC*IMAICA
Trigger: TGCACAGATAGCCATGATGCAGCAGCGCATTGACCG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTTCAGGTCCTGGCACTaGTTCAGGGTTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSFRSWH*FRVSCS
Trigger: GCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAACTCCTGAGTGGCCTTaGTGTGCTCCTCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPTPEWP*CAPPSA
Trigger: AGCTGACGGAGGAGCACAGCAAGGCCACTCAGGAGT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAACTCCTGAGTGGCCTTaGTGTGCTCCTCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRTPEWP*CAPPSA
Trigger: AGCTGACGGAGGAGCACAGCAAGGCCACTCAGGAGT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAAGGCATTTCTTGTCCTaGAGGGCTGCGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRRHFLS*RAALSS
Trigger: GGAGCTCAGCGCAGCCCTGCAGGACAAGAAATGCCT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGGGGTGGGTTATCCTaGAGCTGGGACAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQWGGLS*SWDKCS
Trigger: AGAACACTTGTCCCAGCTGCAGGATAACCCACCCCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCTGCTGCTGCACCTTaGTGGCTTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSAAAP*WLGQSQ
Trigger: CTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGCTCAACTGGGCTTaGAGTTCATTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWLNWA*SSFSWA
Trigger: GGCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCTCCGCAGCTGCTCCTaGAGCTCTTGGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKLRSCS*SSWFCC
Trigger: GCAGCAGAACCAAGAGCTGCAGGAGCAGCTGCGGAG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCCAGGCTCCGCAGCTaGTCCTGCAGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSRLRS*SCSSWF
Trigger: GAACCAAGAGCTGCAGGAGCAGCTGCGGAGCCTGGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGTCTTCAGCCCAGCCTaGTGTAGCTCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKVFSPA*CSSWPS
Trigger: GCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGAC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCGAAGCTGCTGGTCTaGATGGGCAACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSKLLV*MGNLCL
Trigger: GAGGCACAGGTTGCCCATGCAGACCAGCAGCTTCGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCCAGGTCTCGAAGCTaGTGGTCTGCATGGGCAACC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPRSRS*WSAWAT
Trigger: GGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLPPGI*PGLEAA
Trigger: AGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLPPGI*PGLEAA
Trigger: AGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPVMLMI*VVRRRA
Trigger: CGCTCGTCGGCGCACCACGCAGATCATCAACATCAC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCAGGAGCAGACCGCGTaGTGTAGAACGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGQEQTA*CRTMSW
Trigger: CCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACAGGAGCAGACCGCGTaGTGTAGAACGATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRQEQTA*CRTMSW
Trigger: CCAACTCATCGTTCTACAGCACGCGGTCTGCTCCTG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGTAGAAGCTGGAGCTaGTTTCTTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSRSWS*FLLGLS
Trigger: ACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCCCTTTAGTGCTTTaGCTTGCCCTTGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRGPLVL*LALGSR
Trigger: CCTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTTCAAGGTTTCCAGCTaGAAGACATCACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRFKVSS*KTSPST
Trigger: GGTGCTGGGTGATGTCTTGCAGCTGGAAACCTTGAA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAAGAGTGGCTGCCTCTTaGTTCAAGGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLRVAAS*FKVSSC
Trigger: GCAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGCTTCTCTTTGGCCTaGTGCTTCAGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGCFSLA*CFRPAS
Trigger: ACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAAGCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCTGCTTCAGGCTACTaGTTAGCTGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSASGY*LAAPPG
Trigger: ACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGCTGGGCATGGTCCTaGCTAGTTGCCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPCWAWS*LVASCF
Trigger: GAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCAGAGATACAACGCTaGTGCTCTTCCAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSEIQR*CSSRAS
Trigger: AGATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCAGAGATACAACGCTaGTGCTCTTCCAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSEIQR*CSSRAS
Trigger: AGATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCAGGCTTCGGGTCTCTaGCTTCAGCTCAGAGATACA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQQASGL*LQLRDT
Trigger: TGTATCTCTGAGCTGAAGGCAGAGACCCGAAGCCTG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCAGGCTTCGGGTCTCTaGCTTCAGCTCAGAGATACA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSQASGL*LQLRDT
Trigger: TGTATCTCTGAGCTGAAGGCAGAGACCCGAAGCCTG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGGCAGCCATGGCCTCTaGCAGCTCCCGCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLGSHGL*QLPPQD
Trigger: GTCCTGCGGCGGGAGCTGGCAGAGGCCATGGCTGCC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTTCTCCTTTGCCTCCTaGAGCTCCTGGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKFSFAS*SSWRAF
Trigger: GAAGGCCCGCCAGGAGCTGCAGGAGGCAAAGGAGAA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACGCTGTGGGATTCTATaGCTGCCACCTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLRCGIL*LPPSPL
Trigger: CAAAGGAGAAGGTGGCAGGCATAGAATCCCACAGCG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCGCTGTGGGATTCTATaGCTGCCACCTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQRCGIL*LPPSPL
Trigger: CAAAGGAGAAGGTGGCAGGCATAGAATCCCACAGCG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCTAGTTCGTTCTGCTaGCGGCTTATCTGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGASSFC*RLIWSS
Trigger: CGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCTAGTTCGTTCTGCTaGCGGCTTATCTGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRASSFC*RLIWSS
Trigger: CGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCAGCTAGTTCGTTCTaGTGCCGGCTTATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSASSF*CRLIWS
Trigger: GCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATTGGACCTGCTGGAGTaGTCTGGCCAGGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLDLLE*SGQVGM
Trigger: CATGCCAACCTGGCCAGAGCACTCCAGCAGGTCCAA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCTTCTCTTGGACCTaGTGGAGTGCTCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSFSWT*WSALAR
Trigger: CCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAAGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGTGGAGAGGTCATCTaGAAGCTTCTGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSGEVI*KLLGPD
Trigger: GTCAGGGCCCAGAAGCTTGCAGATGACCTCTCCACT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAATTGCCCATCTGCTCTaGCTCCCGCTCCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRIAHLL*LPLHSL
Trigger: CAGGCTATGGAGCGGGAGGCAGAGCAGATGGGCAAT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGCTCATTGCCCATCTaGTCTGCCTCCCGCTCCATA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSSLPI*SASRSI
Trigger: TATGGAGCGGGAGGCAGAGCAGATGGGCAATGAGCT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCGAACTCCACACGCTaGTCGTTGAGGGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKANSTR*SLRAFC
Trigger: GCAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACAGGGCATGAGCCAGTaGCTCTTGCAGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPQGMSQ*LLQGSE
Trigger: TTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGTTGCTTCACGGTTTaGCGAAGTTCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSCFTV*RSSSSS
Trigger: AGAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGCTGTTCCTTCAGTTaGTTCACGGTTTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSCSFS*FTVCRS
Trigger: ACTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAGCTGTTCCTTCAGTTaGTTCACGGTTTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSCSFS*FTVCRS
Trigger: ACTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCCTGAGCCAGATGCGTaGTCCTTTTCTTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRPEPDA*SFSFLA
Trigger: GGCTAAGAAAGAAAAGGAGCACGCATCTGGCTCAGG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTGTTGGCTCTGTCCTaGCAGCAGCCTCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLLALS*QQPQIG
Trigger: CCCAATCTGAGGCTGCTGGCAGGACAGAGCCAACAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGCTGCTTCTGGCATTaGTGTTCCAGCTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCCFWH*CSSLLT
Trigger: GGTGAGCAAGCTGGAACAGCAATGCCAGAAGCAGCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCAGCCTGCTCCTGCTaGTTCTGGCATTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSACSC*FWHCCS
Trigger: GGAACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGGTCTTGTACCTTGGTaGGGAAGGCAGCCAACTCCC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPGLVPW*GRQPTP
Trigger: GGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGTCTTGTACCTTGGTaGGGAAGGCAGCCAACTCCC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRGLVPW*GRQPTP
Trigger: GGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCACTCATCTTCAGCCTTaGTGTGGTCTTGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTTHLQP*CGLVPW
Trigger: CCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGGAAGAACTTCTCCTaGCACGCCTTCAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGWKNFS*HAFNSW
Trigger: CCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGGGTGGAGAGGGCCTaGTCTTTCTGGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSRVERA*SFWKNF
Trigger: GAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCTTTCAGTCCACTCCCCTGGCTTCTCCTAATAGCTCCTCATAGTGGCAATGCCTCCACTTCCAGAAACTaGCGGCCAAGGTTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PFSPLPWLLLIAPHSGNASTSRN*RPRLAR
Trigger: GCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGA...GGCATTGCCACTATGAGGAGCTATTAGGAGAAGCCAGGGGAGTGGACTGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp ATAGTCGGTCTCCAATGGGCCTTCCTGGCCTCACATCTCAGCTTAGTCAGGCTCTCTTCCTGGAACCGCTaGCTCTCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: IVGLQWAFLASHLSLVRLSSWNR*LSSRTL
Trigger: CAAGGTCCTGGAGGAGAGGCAGCGGTTCCAGGAAGA...GAGCCTGACTAAGCTGAGATGTGAGGCCAGGAAGGCCCATTGGAGACCGACTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGGCAGTGAGTTTCTaGCTCTCTTCCTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWAVSF*LSSWNR
Trigger: GCGGTTCCAGGAAGAGAGGCAGAAACTCACTGCCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTCAGGCCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAATCCAATGTCGTCCTaGTTGGCGAGCCCAATCACC +
Preference number: 4 (lower is better)
Translates to: LRPPSHERGHNPMSSCLANPMSS*LASPIT
Trigger: GGTGATTGGGCTCGCCAAGCAGGACGACATTGGATT...CGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATTTCGGACTCGGTTATaGAGGAGGCCTTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRFRTRL*RRPSAR
Trigger: GCGAGCGGAAGGCCTCCTCCATAACCGAGTCCGAAA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351960.10
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCAGATACCAGGCATTCTaGGGAAGAGGGATGTTTTCG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTRYQAF*GRGMFS
Trigger: CGAAAACATCCCTCTTCCCCAGAATGCCTGGTATCT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGGTATAAGAGCAGCATaGTCATCTTCGCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTGIRAA*SSSPVP
Trigger: TGGAACTGGCGAAGATGACCATGCTGCTCTTATACC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGAGCTCATGGTAGAGTaGTATAAGAGCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGELMVE*YKSSMV
Trigger: GACCATGCTGCTCTTATACCACTCTACCATGAGCTC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGCAGGATATCACCCATaGGAGAAGCTGGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQAGYHP*EKLENL
Trigger: CAGGTTCTCCAGCTTCTCCCATGGGTGATATCCTGC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCAGGATATCACCCATaGGAGAAGCTGGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAGYHP*EKLENL
Trigger: CAGGTTCTCCAGCTTCTCCCATGGGTGATATCCTGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGCACCTTGCTGGCTTaGTCAGAGTCAGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSCTLLA*SESASF
Trigger: GAAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAAAPC*LGQSQP
Trigger: TGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCTGCCTGCTCCTTCTaGCTCAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPAACSF*LNWACS
Trigger: ACTGCAAGCCCAGTTGAGCCAGAAGGAGCAGGCAGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCCTGCTGTAGCTCATaGCCCAGCCGTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRACCSS*PSRSAS
Trigger: TGAAGCTGAACGGCTGGGCCATGAGCTACAGCAGGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCTGTTCAGCCTCCTTaGTCTTCAGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSVQPP*SSAQPA
Trigger: AGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLASVAT*NLPRSR
Trigger: TCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAAGCTGGGGCTTAGCCTaGGGCTCACGGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSWGLA*GSRLFK
Trigger: TTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGTAGAACGATGAGTTaGCGCTGTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCRTMS*RCLALP
Trigger: TGGAAGAGCCAGACAGCGCCAACTCATCGTTCTACA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGTAGAACGATGAGTTaGCGCTGTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKACRTMS*RCLALP
Trigger: TGGAAGAGCCAGACAGCGCCAACTCATCGTTCTACA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACGGCGCAGGGTCTCTTaGGGGTCTCCAGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRRRRVS*GSPVFI
Trigger: GATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCTCGGCTATCTGGATTaGCTGCATGCTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKLGYLD*LHAGSA
Trigger: CGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSGAAFF*ASVVLC
Trigger: ACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQGAAFF*ASVVLC
Trigger: ACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGCTACTGTTGGCCTaGGAGCTGAGAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWLLLA*ELREGT
Trigger: AGTGCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGGCCTACTCCTCTTATaGTCCCTTCTAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGGLLLL*SLLDPE
Trigger: CTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGGCCTACTCCTCTTATaGTCCCTTCTAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEGLLLL*SLLDPE
Trigger: CTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGGAAAGAGCATCCTCTaGCAGGTGCTCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPGKSIL*QVLPPG
Trigger: ACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGTTTGCAGCAAGAGTaGCTGCCTCTTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCLQQE*LPLASR
Trigger: CCTTGAAGCAAGAGGCAGCCACTCTTGCTGCAAACA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGTTTGCAGCAAGAGTaGCTGCCTCTTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGCLQQE*LPLASR
Trigger: CCTTGAAGCAAGAGGCAGCCACTCTTGCTGCAAACA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGATCTCTACCCTGGCTTaGAGCTGTGTGTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGISTLA*SCVLFA
Trigger: TGCAAACAACACACAGCTCCAAGCCAGGGTAGAGAT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCATCTCTACCCTGGCTTaGAGCTGTGTGTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTISTLA*SCVLFA
Trigger: TGCAAACAACACACAGCTCCAAGCCAGGGTAGAGAT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATTTTCTTCTTCGAAGTaGCCCCGCTCAGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLFSSSK*PRSASS
Trigger: GCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCTGCAACCTGGGCCTaGGCCTCATGCTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSATWA*ASCCSW
Trigger: CCAGGAACAGCATGAGGCCCAGGCCCAGGTTGCAGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGACTCTTTGAGGGCCTaGAGCTGCTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKDSLRA*SCSWSW
Trigger: CCAGCTCCAGGAGCAGCTCCAGGCCCTCAAAGAGTC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGTGCCTCCTCTTGCTaGCTATCCTCATACCGCTCA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCASSC*LSSYRS
Trigger: TGAGCGGTATGAGGATAGCCAGCAAGAGGAGGCACA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGTGCCTCCTCTTGCTaGCTATCCTCATACCGCTCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLCASSC*LSSYRS
Trigger: TGAGCGGTATGAGGATAGCCAGCAAGAGGAGGCACA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGCTGCCGGCTTATCTaGAGCTCGCTGTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRCCRLI*SSLWDS
Trigger: AGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACTGGCCAGGTTGGCATaGAGCTCAGCTAGTTCGTTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRLARLA*SSASSF
Trigger: GAACGAACTAGCTGAGCTCCATGCCAACCTGGCCAG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCTGCTGGAGTGCTCTaGCCAGGTTGGCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPAGVL*PGWHGA
Trigger: AGCTCCATGCCAACCTGGCCAGAGCACTCCAGCAGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCATCTGCAAGCTTCTaGGCCCTGACTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSSASF*ALTSFS
Trigger: AGAGAAGGAAGTCAGGGCCCAGAAGCTTGCAGATGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCATCTGCAAGCTTCTaGGCCCTGACTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAESSASF*ALTSFS
Trigger: AGAGAAGGAAGTCAGGGCCCAGAAGCTTGCAGATGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCTTTTCCTGCAGAGTaGAGAGGTCATCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSFPAE*RGHLQA
Trigger: AGCTTGCAGATGACCTCTCCACTCTGCAGGAAAAGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCCACCTCTTTGCTGGTaGCAGCCATCTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQPPLCW*QPSFPA
Trigger: TGCAGGAAAAGATGGCTGCCACCAGCAAAGAGGTGG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGTGGTCTTGTACCTTaGTGCGGAAGGCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLCGLVP*CGRQPT
Trigger: AGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGTGGTCTTGTACCTTaGTGCGGAAGGCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCGLVP*CGRQPT
Trigger: AGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACCTGGCGATTCAGGATaGACACCTCCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRPGDSG*TPPPPS
Trigger: GCTTGGAGGAGGAGGTGTCCATCCTGAATCGCCAGG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCCTTCTCCAGGACCTaGCGATTCAGGATGGACACC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSFSRT*RFRMDT
Trigger: GGTGTCCATCCTGAATCGCCAGGTCCTGGAGAAGGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTAGGGCCTGCTCTTTCTaGAAGAACTTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSRACSF*KNFSCH
Trigger: GTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCTCGAGCTGCAGGGTaGAGAGGGCCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKARAAG*RGPALS
Trigger: AGAAAGAGCAGGCCCTCTCCACCCTGCAGCTCGAGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTACTGCCGGCCAAGGTTaGCCCGCTCACCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLTAGQG*PAHPAP
Trigger: GGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGCCCACTCAGTTCTTCCACCTaGGCAGTGAGTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PPSHERGHNPMSSCLASPLSSST*AVSFCL
Trigger: GAGGCAGAAACTCACTGCCCAGGTGGAAGAACTGAG...TGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAAGTTTGAGGGCCACTaGGAAAGAGAAGGGGTATCA +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLKFEGH*EREGVS
Trigger: TGATACCCCTTCTCTTTCCCAGTGGCCCTCAAACTT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613205.4
CDS-3UTR TCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGAAGCTGGAGAACCTaGGAGAAAGTTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGRSWRT*EKVVPT
Trigger: AGTGGGAACAACTTTCTCTCAGGTTCTCCAGCTTCT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCCTCCGAAAGCTGGTTaGTTTTGCGATCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGPPKAG*FCDPSG
Trigger: GCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCGTGCTGTAGAACGATaGGTTGGCGCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKRAVER*VGAVWL
Trigger: GAGCCAGACAGCGCCAACTCATCGTTCTACAGCACG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGTCAACCTGGCACACACACCTATGGATGCTTTCAAGACTCAGCAGGAGCGATAAGGCGAGCTAGAGACTaGGTAGAGGAGGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RQPGTHTYGCFQDSAGAIRRARD*VEEVAR
Trigger: GCGAGCCACCTCCTCTACTCAGTCTCTAGCTCGCCT...TATCGCTCCTGCTGAGTCTTGAAAGCATCCATAGGTGTGTGTGCCAGGTTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACAAGCTGAGCAGGGCTaGGTTGCCATAATCGGGAGA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPQAEQG*VAIIGR
Trigger: TCTCCCGATTATGGCAACTCAGCCCTGCTCAGCTTG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ATAATCCAATGTCGTCCTGCTTGGCGAGCCCAATCACCAAGCTTCCTGAACAGCGGTAGCCAGGCAAGCTaGGCAGGGCTGAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: IIQCRPAWRAQSPSFLNSGSQAS*AGLSCH
Trigger: ATGGCAACTCAGCCCTGCTCAGCTTGCCTGGCTACC...GCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGTGCCTCCAGCTGCTTaGGAGCCGCATCCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLVPPAA*EPHPAP
Trigger: GGGAGCGGGATGCGGCTCTCAAGCAGCTGGAGGCAC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCTTCAAGGACTCTTTaGGGGCCTGGAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPSRTL*GPGAAP
Trigger: AGGAGCAGCTCCAGGCCCTCAAAGAGTCCTTGAAGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGGCAGCTACTTCTTTaGCGAGCTGCTCACACTCAC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGRQLLL*RAAHTH
Trigger: GTGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCTCCTCCAGGACCTTaGCCTTGGCACCCTCATACT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSPPGP*PWHPHT
Trigger: AGTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTGCTTCAAGATTTaGTGTCCCTCTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSGCFKI*CPSSVP
Trigger: TGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCC...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTCTCATCAGCAAGCTaGTTCTTCAGCCGTCTCATC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLSSAS*FFSRLI
Trigger: GATGAGACGGCTGAAGAAGCAGCTTGCTGATGAGAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTCTCATCAGCAAGCTaGTTCTTCAGCCGTCTCATC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLSSAS*FFSRLI
Trigger: GATGAGACGGCTGAAGAAGCAGCTTGCTGATGAGAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAAGGCGGTCAATGCGCTaGTGCATCATGGCTATCTGT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRRRSMR*CIMAIC
Trigger: ACAGATAGCCATGATGCAGCAGCGCATTGACCGCCT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTTCAGGTCCTGGCACTaGTTCAGGGTTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGFRSWH*FRVSCS
Trigger: GCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGGGTGGGTTATCCTaGAGCTGGGACAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWGGLS*SWDKCS
Trigger: AGAACACTTGTCCCAGCTGCAGGATAACCCACCCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGATGTCCCATCCCCACCAGATGCCCATGGCTGCTTCACAGCAAACACGTCCTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PRCPIPTRCPWLLHSKHVLIVLS*LLLLAQ
Trigger: TTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAG...GACGTGTTTGCTGTGAAGCAGCCATGGGCATCTGGTGGGGATGGGACATCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLIVLS*LLLLAQ
Trigger: TTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCCTCCGCAGCTGCTCCTaGAGCTCTTGGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QLAMERKPAEVQSFTLEGLRSCS*SSWFCC
Trigger: GCAGCAGAACCAAGAGCTGCAGGAGCAGCTGCGGAG...GCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCGAAGCTGCTGGTCTaGATGGGCAACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSKLLV*MGNLCL
Trigger: GAGGCACAGGTTGCCCATGCAGACCAGCAGCTTCGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRAHPGK*PCRSCS
Trigger: GGAACAGCTTCTACATGGGCACTTGCCAGGATGAGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTTCCAGTCATCCAGCTaGTCAGGCTCATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGFQSSS*SGSSWQ
Trigger: TTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTGCAGCTCTGCAATaGGGTTCCAGTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAAALQ*GSSHPA
Trigger: AGCTGGATGACTGGAACCGCATTGCAGAGCTGCAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATTTAGTGCTTTGCCTTaGCCTTGGCTCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRFSALP*PWLEGW
Trigger: CCACCCCTCGAGCCAAGGGCAAGGCAAAGCACTAAA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGCCCTTTAGTGCTTTaGCTTGCCCTTGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGPLVL*LALGSR
Trigger: CCTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCGCCCACACTGTCCATaGTCCAGGCCCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLRPHCP*SRPPGP
Trigger: TGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGAGCTGTGTGTTGTTTaGAGCAAGAGTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRELCVV*SKSGCL
Trigger: GAGGCAGCCACTCTTGCTGCAAACAACACACAGCTC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTAGACAGCTGCTaGTTTTCTTCTTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGRLDSC*FSSSKW
Trigger: CCACTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTTGGAGATGGAGCTCTaGAGGTCAGTGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQLEMEL*RSVIRL
Trigger: TAGCCTGATCACTGACCTGCAGAGCTCCATCTCCAA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTTGGAGATGGAGCTCTaGAGGTCAGTGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLEMEL*RSVIRL
Trigger: TAGCCTGATCACTGACCTGCAGAGCTCCATCTCCAA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATTCTCTTTGGCCTGCTaGTTCAGGCCAGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRFSLAC*FRPASS
Trigger: AGAACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGCTTCTCTTTGGCCTaGTGCTTCAGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPCFSLA*CFRPAS
Trigger: ACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAAGCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAACTGCTGCTCCTTCTaGTTCAGGCTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQNCCSF*FRLLLS
Trigger: GCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGCCTAGTTGCCTCCTaGTTCTCCGCTACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPCLVAS*FSATSF
Trigger: GAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCAGTTGCTTTTTGCTaGTCAGACCGCAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSVAFC*SDRSCN
Trigger: GTTGCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCAGAGATACAACGCTaGTGCTCTTCCAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSEIQR*CSSRAS
Trigger: AGATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCAGGCTTCGGGTCTCTaGCTTCAGCTCAGAGATACA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGQASGL*LQLRDT
Trigger: TGTATCTCTGAGCTGAAGGCAGAGACCCGAAGCCTG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCACTCTCAGCTGTGTaGTGGGCAGCCATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSLSAV*WAAMAS
Trigger: AGAGGCCATGGCTGCCCAGCACACAGCTGAGAGTGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTAGTTCGTTCTGCTaGCGGCTTATCTGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRASSFC*RLIWSS
Trigger: CGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCAGCTAGTTCGTTCTaGTGCCGGCTTATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSASSF*CRLIWS
Trigger: GCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGCGGGCCACCTCTTTaGTGGTGGCAGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSGPPL*WWQPSF
Trigger: AAAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCATAGCCTGCAGCGCTaGCTGTGTGCTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKHSLQR*LCAAEL
Trigger: CAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTATG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCCTGAGCCAGATGCGTaGTCCTTTTCTTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSPEPDA*SFSFLA
Trigger: GGCTAAGAAAGAAAAGGAGCACGCATCTGGCTCAGG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCTCTAACTGGCCCTaGAGAGTCTCCAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSSNWP*RVSRAL
Trigger: CAGTGCTCTGGAGACTCTGCAGGGCCAGTTAGAGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGTCTTGTACCTTGGTaGGGAAGGCAGCCAACTCCC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGLVPW*GRQPTP
Trigger: GGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGACTCATCTTCAGCCTTaGTGTGGTCTTGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAETHLQP*CGLVPW
Trigger: CCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGGAAGAACTTCTCCTaGCACGCCTTCAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEWKNFS*HAFNSW
Trigger: CCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTGGAAGAACTTCTCCTaGCACGCCTTCAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAWKNFS*HAFNSW
Trigger: CCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGGAAGAACTTCTCCTaGCACGCCTTCAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRWKNFS*HAFNSW
Trigger: CCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCATCAGCACGTACGGCTaGCAACTCTTGGACATACTT +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGISTYG*QLLDIL
Trigger: AAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGAT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGGGCAGTGAGTTTCTaGCTCTCTTCCTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPWAVSF*LSSWNR
Trigger: GCGGTTCCAGGAAGAGAGGCAGAAACTCACTGCCCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCCCTCTTCAGTGCCATaGATTCTGTCAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTPSSVP*ILSMIL
Trigger: CAAGATCATTGACAGAATCCATGGCACTGAAGAGGG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGATACCAGGCATTCTaGGGAAGAGGGATGTTTTCG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGRYQAF*GRGMFS
Trigger: CGAAAACATCCCTCTTCCCCAGAATGCCTGGTATCT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGATACCAGGCATTCTaGGGAAGAGGGATGTTTTCG +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAERYQAF*GRGMFS
Trigger: CGAAAACATCCCTCTTCCCCAGAATGCCTGGTATCT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGGTATAAGAGCAGCATaGTCATCTTCGCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAGIRAA*SSSPVP
Trigger: TGGAACTGGCGAAGATGACCATGCTGCTCTTATACC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAACTGTTCCCAGTCCCTaGGACTTTTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRTVPSP*DFWSSW
Trigger: CCATGAGCTCCAAAAGTCCCAGGGACTGGGAACAGT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGAAAGTTGTTCCCACTaGAAGAGGAGGCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAESCSH*KRRQPS
Trigger: AGAAGGTTGCCTCCTCTTCCAGTGGGAACAACTTTC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGAAAGTTGTTCCCACTaGAAGAGGAGGCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLRHRAHPSWERASSGRESCSH*KRRQPS
Trigger: AGAAGGTTGCCTCCTCTTCCAGTGGGAACAACTTTC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCTCATCTGGAACTGTaGGGTCTGCAGGATATCACC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSHLEL*GLQDIT
Trigger: GGTGATATCCTGCAGACCCCACAGTTCCAGATGAGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATTCAGCCGTCTCATCTaGAACTGTGGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPFSRLI*NCGVCR
Trigger: CCTGCAGACCCCACAGTTCCAGATGAGACGGCTGAA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCATTTTGCGATCCATCTaGCTCTTCTCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTILRSI*LFSVFR
Trigger: CCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAAT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTTCTCCTCCGAAAGCTaGTTGATTTTGCGATCCATC +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLFSSES*LILRSI
Trigger: GATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTTCTCCTCCGAAAGCTaGTTGATTTTGCGATCCATC +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGFSSES*LILRSI
Trigger: GATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGCACCTTGCTGGCTTaGTCAGAGTCAGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGCTLLA*SESASF
Trigger: GAAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCCTTCTGGCTCAACTaGGCTTGCAGTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSFWLN*ACSSFS
Trigger: GCTGAATGAACTGCAAGCCCAGTTGAGCCAGAAGGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCCTTCTGGCTCAACTaGGCTTGCAGTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSFWLN*ACSSFS
Trigger: GCTGAATGAACTGCAAGCCCAGTTGAGCCAGAAGGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCCTTCTGGCTCAACTaGGCTTGCAGTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSFWLN*ACSSFS
Trigger: GCTGAATGAACTGCAAGCCCAGTTGAGCCAGAAGGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCTGCCTGCTCCTTCTaGCTCAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKAACSF*LNWACS
Trigger: ACTGCAAGCCCAGTTGAGCCAGAAGGAGCAGGCAGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACATCATAATGTGTTTTaGCTTTCTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVHAPGPLGQLREGASEGHHNVF*LSPSAA
Trigger: AGCTGCAGATGGAGAAAGCCAAAACACATTATGATG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRILKSS*GLAWGS
Trigger: TGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTAT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TTTCAAGACTCAGCAGGAGCGATAGCTTCCACGAAGCCTTTCTTGACCACTTGCGTTCTCCAGGGACGCTaGTGCCGTCTGGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: FQDSAGAIASTKPFLTTCVLQGR*CRLAGY
Trigger: GTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAAC...GCAAGTGGTCAAGAAAGGCTTCGTGGAAGCTATCGCTCCTGCTGAGTCTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGTAGAACGATGAGTTaGCGCTGTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLCRTMS*RCLALP
Trigger: TGGAAGAGCCAGACAGCGCCAACTCATCGTTCTACA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCAGGTCTTCAGATGTaGGGGGCACACTCGATTGCG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKAGLQM*GAHSIA
Trigger: CGCAATCGAGTGTGCCCCCCACATCTGAAGACCTGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGAAFF*ASVVLC
Trigger: ACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTGTTTAGTAGAAGCTaGAGCTGCTTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAELFSRS*SCFLLG
Trigger: GCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCTGAAGGCCATCGACTaGCGCCGGTCAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKLKAID*RRSACL
Trigger: TAAACAGGCTGACCGGCGCCAGTCGATGGCCTTCAG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGGCTACTGTTGGCCTaGGAGCTGAGAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRWLLLA*ELREGT
Trigger: AGTGCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGTCAGACCCAGTCCTaGACTTCAAGAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGQTQS*TSRVRA
Trigger: GGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGAAAGAGCATCCTCTaGCAGGTGCTCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGKSIL*QVLPPG
Trigger: ACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTATCTCTACCCTGGCTTaGAGCTGTGTGTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAISTLA*SCVLFA
Trigger: TGCAAACAACACACAGCTCCAAGCCAGGGTAGAGAT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACCAGCATCTCTACCCTaGCTTGGAGCTGTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRPASLP*LGAVCC
Trigger: ACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGCTCTTCCTTGGCCTaGCTGAGGTTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSSSLA*LRLEME
Trigger: CTCCATCTCCAACCTCAGCCAGGCCAAGGAAGAGCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGTCTCAACACAGGCCTaGAGTTCCTCCACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKVSTQA*SSSTFR
Trigger: CCGGAAGGTGGAGGAACTCCAGGCCTGTGTTGAGAC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCTGTTCCTGGAACATaGCGCCATACTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPAVPGT*RHTVPP
Trigger: AGGAGGCACAGTATGGCGCCATGTTCCAGGAACAGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAATCTGGAGCTCGCTGTaGGATTCTATGCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPIWSSL*DSMPAT
Trigger: GGTGGCAGGCATAGAATCCCACAGCGAGCTCCAGAT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGCTGCCGGCTTATCTaGAGCTCGCTGTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRCCRLI*SSLWDS
Trigger: AGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGTGTGCTGCAGAACTaGCGTCCCTGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPCVLQN*RPCCSS
Trigger: GGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGTGGTCTTGTACCTTaGTGCGGAAGGCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGCGLVP*CGRQPT
Trigger: AGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATCCTTCTCCAGGACCTaGCGATTCAGGATGGACACC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSFSRT*RFRMDT
Trigger: GGTGTCCATCCTGAATCGCCAGGTCCTGGAGAAGGA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGCGTTCTGCAGCTCTaGCACTGTTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRCVLQL*HCCWLS
Trigger: AGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAAGGGCCTGCTCTTTCTaGAAGAACTTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRRACSF*KNFSCH
Trigger: GTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGGCACCCTCATACTTaGCAGTCATCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRWHPHT*QSSPPA
Trigger: AGCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGCCCATTCAGTCCACTCCCCTaGCTTCTCCTAATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSHERGHNPMSSCLASPFSPLP*LLLIAP
Trigger: AGGAGCTATTAGGAGAAGCCAGGGGAGTGGACTGAA...TGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAAGAAGCTGGAGAACCTaGGAGAAAGTTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLRSWRT*EKVVPT
Trigger: AGTGGGAACAACTTTCTCTCAGGTTCTCCAGCTTCT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACCTCCGAAAGCTGGTTaGTTTTGCGATCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRPPKAG*FCDPSG
Trigger: GCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGTGAAAGTTTTCCCTaGAGGATTTCGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCESFP*RISFFS
Trigger: AGAGAAGAACGAAATCCTTCAGGGAAAACTTTCACA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGGACAGGGCCTTCTTTaGGGCTCCCCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLGQGLL*GSPPQK
Trigger: CTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCTTCATTAGCCACCTaGAGTTGCTGCTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGASLAT*SCCCRI
Trigger: GATTCTGCAGCAGCAACTTCAGGTGGCTAATGAAGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTGGGCCTGTGTCACTaGGGTCTGGGCACTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLGLCH*GLGTVP
Trigger: CGGGACAGTGCCCAGACCTCAGTGACACAGGCCCAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGGCTGCTTCAAGATTTaGTGTCCCTCTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRGCFKI*CPSSVP
Trigger: TGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGCTTCAGGGTTTCATaGAGCCGCATGGTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRCFRVS*SRMVRL
Trigger: GAGCCTTACCATGCGGCTGCATGAAACCCTGAAGCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATTCAGGTCCTGGCACTaGTTCAGGGTTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRFRSWH*FRVSCS
Trigger: GCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLIVLS*LLLLAQ
Trigger: TTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLPPGI*PGLEAA
Trigger: AGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPAHPGK*PCRSCS
Trigger: GGAACAGCTTCTACATGGGCACTTGCCAGGATGAGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAHPGK*PCRSCS
Trigger: GGAACAGCTTCTACATGGGCACTTGCCAGGATGAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATTCCAGTCATCCAGCTaGTCAGGCTCATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPFQSSS*SGSSWQ
Trigger: TTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATTCCAGTCATCCAGCTaGTCAGGCTCATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRFQSSS*SGSSWQ
Trigger: TTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCTGCAGCTCTGCAATaGGGTTCCAGTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKAAALQ*GSSHPA
Trigger: AGCTGGATGACTGGAACCGCATTGCAGAGCTGCAGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGTAGAAGCTGGAGCTaGTTTCTTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSRSWS*FLLGLS
Trigger: ACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGAGTGGCTGCCTCTTaGTTCAAGGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPRVAAS*FKVSSC
Trigger: GCAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGCAGCAAGAGTGGCTaGCTCTTGCTTCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRCSKSG*LLLQGF
Trigger: GAAACCTTGAAGCAAGAGGCAGCCACTCTTGCTGCA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGCAGCAAGAGTGGCTaGCTCTTGCTTCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGCSKSG*LLLQGF
Trigger: GAAACCTTGAAGCAAGAGGCAGCCACTCTTGCTGCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTATCAGGCTAGACAGCTaGTGCTTTTCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAIRLDS*CFSSSK
Trigger: CTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGAT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATTCTCTTTGGCCTGCTaGTTCAGGCCAGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRFSLAC*FRPASS
Trigger: AGAACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAACTGCTGCTCCTTCTaGTTCAGGCTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGNCCSF*FRLLLS
Trigger: GCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCAGTTGCTTTTTGCTaGTCAGACCGCAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSVAFC*SDRSCN
Trigger: GTTGCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATACTGTGCCTCCTCTTaGTGGCTATCCTCATACCGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPYCASS*WLSSYR
Trigger: GCGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCATGGCGCCATACTGTaGCTCCTCTTGCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKHGAIL*LLLLAI
Trigger: GATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGTGGGATTCTATGCCTaGCACCTTCTCCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRVGFYA*HLLLCL
Trigger: GAGGCAAAGGAGAAGGTGGCAGGCATAGAATCCCAC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCCACCTCCCTTTCCTaGTGCCCACGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLATSLS*CPRSSC
Trigger: GCAGGAGGAGCGTGGGCAGCAGGAAAGGGAGGTGGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAAGCTGTTCCTTCAGTTaGTTCACGGTTTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSCSFS*FTVCRS
Trigger: ACTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCTGTCAGCCTGCTCCTaGTGCTTCTGGCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKLSACS*CFWHCC
Trigger: ACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGACAG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGACTCATCTTCAGCCTTaGTGTGGTCTTGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQTHLQP*CGLVPW
Trigger: CCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTACTCATCTTCAGCCTTaGTGTGGTCTTGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSTHLQP*CGLVPW
Trigger: CCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGCAGAGCTGCGTTCTaGAGCTCTGGCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSRAAF*SSGTVA
Trigger: AGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGGGTGGAGAGGGCCTaGTCTTTCTGGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPRVERA*SFWKNF
Trigger: GAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCCCCGGTTCTCCTCTaGCAGCAGGCCATGCGCCTT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPPVLL*QQAMRL
Trigger: AAGGCGCATGGCCTGCTGGCAGAGGAGAACCGGGGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTATCAGCACGTACGGCTaGCAACTCTTGGACATACTT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSISTYG*QLLDIL
Trigger: AAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGAT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGATCAGCACGTACGGCTaGCAACTCTTGGACATACTT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQISTYG*QLLDIL
Trigger: AAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGAT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGGGCAGTGAGTTTCTaGCTCTCTTCCTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKWAVSF*LSSWNR
Trigger: GCGGTTCCAGGAAGAGAGGCAGAAACTCACTGCCCA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCTTTCAGTCCACTCCCCTGGCTTCTCCTAATAGCTCCTCATAGTGGCAATGCCCCAGATGCCCATGGCTaGTTCACAGCAAACACGTCC +
Preference number: 4 (lower is better)
Translates to: PFSPLPWLLLIAPHSGNAPDAHG*FTANTS
Trigger: GGACGTGTTTGCTGTGAAGCAGCCATGGGCATCTGG...GGCATTGCCACTATGAGGAGCTATTAGGAGAAGCCAGGGGAGTGGACTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp ATAGTCGGTCTCCAATGGGCCTTCCTGGCCTCACATCTCAGCTTAGTCAGGCTCAGCCTCTGTTCACACTaGTCTTCTCGTCAACCTGGC +
Preference number: 4 (lower is better)
Translates to: IVGLQWAFLASHLSLVRLSLCSH*SSRQPG
Trigger: GCCAGGTTGACGAGAAGAGCAGTGTGAACAGAGGCT...GAGCCTGACTAAGCTGAGATGTGAGGCCAGGAAGGCCCATTGGAGACCGACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCCCTCTTCAGTGCCATaGATTCTGTCAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGPSSVP*ILSMIL
Trigger: CAAGATCATTGACAGAATCCATGGCACTGAAGAGGG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAAGATACCAGGCATTCTaGGGAAGAGGGATGTTTTCG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLRYQAF*GRGMFS
Trigger: CGAAAACATCCCTCTTCCCCAGAATGCCTGGTATCT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGGTATAAGAGCAGCATaGTCATCTTCGCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQGIRAA*SSSPVP
Trigger: TGGAACTGGCGAAGATGACCATGCTGCTCTTATACC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTTTAGCCCGTCCTCATaGTCCAGCACAAATTTAAGA +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGFSPSS*SSTNLR
Trigger: TCTTAAATTTGTGCTGGACCATGAGGACGGGCTAAA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGAAAGTTGTTCCCACTaGAAGAGGAGGCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQESCSH*KRRQPS
Trigger: AGAAGGTTGCCTCCTCTTCCAGTGGGAACAACTTTC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCAGGATATCACCCATaGGAGAAGCTGGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAGYHP*EKLENL
Trigger: CAGGTTCTCCAGCTTCTCCCATGGGTGATATCCTGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCAGGATATCACCCATaGGAGAAGCTGGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPAGYHP*EKLENL
Trigger: CAGGTTCTCCAGCTTCTCCCATGGGTGATATCCTGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTATTTTGCGATCCATCTaGCTCTTCTCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAILRSI*LFSVFR
Trigger: CCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAAT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTCTCCTCCGAAAGCTaGTTGATTTTGCGATCCATC +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAFSSES*LILRSI
Trigger: GATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTTCTCCTCCGAAAGCTaGTTGATTTTGCGATCCATC +
Preference number: 4 (lower is better)
Translates to: TPLLRHRAHPSWERASSGFSSES*LILRSI
Trigger: GATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGGTTATCCTGCAGCTaGGACAAGTGTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRGLSCS*DKCSSS
Trigger: GCTGGAAGAACACTTGTCCCAGCTGCAGGATAACCC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCATGGCTGCTTCACAGCAAACACGTCCCAATCTAAGCCCACTTCTCTGTTCTGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PMAASQQTRPNLSPLLCSAAAPC*LGQSQP
Trigger: TGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGC...AGAACAGAGAAGTGGGCTTAGATTGGGACGTGTTTGCTGTGAAGCAGCCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCCTTCTGGCTCAACTaGGCTTGCAGTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSFWLN*ACSSFS
Trigger: GCTGAATGAACTGCAAGCCCAGTTGAGCCAGAAGGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCTTAGTCAGGCTCTTTCACAGCCTCTGTTCACACTGCTCTTCTCGTCAACCTACCTGGGCAGTAAGGTaGCGGCAGGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLVRLFHSLCSHCSSRQPTWAVR*RQVCSA
Trigger: GGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGT...AGGTTGACGAGAAGAGCAGTGTGAACAGAGGCTGTGAAAGAGCCTGACTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGGTCTCGAAGCTGCTaGTCTGCATGGGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKRSRSC*SAWATC
Trigger: ACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRASVAT*NLPRSR
Trigger: TCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGCTGGGGCTTAGCCTaGGGCTCACGGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSWGLA*GSRLFK
Trigger: TTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKILKSS*GLAWGS
Trigger: TGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTAT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCTTTCAGTCCACTCCCCTGGCTTCTCCTAATAGCTCCTCATAGTGGCAATGCCATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PFSPLPWLLLIAPHSGNAILKSS*GLAWGS
Trigger: TGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTAT...GGCATTGCCACTATGAGGAGCTATTAGGAGAAGCCAGGGGAGTGGACTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGTAGAACGATGAGTTaGCGCTGTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRCRTMS*RCLALP
Trigger: TGGAAGAGCCAGACAGCGCCAACTCATCGTTCTACA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTGTTTAGTAGAAGCTaGAGCTGCTTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLFSRS*SCFLLG
Trigger: GCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCGCTGGCTGTGGTGGTaGCAATGCGCGGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLRWLWW*QCAENG
Trigger: GCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCAGCAGTGGCGGCGCTaGCTGTGGTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLQQWRR*LWWWQC
Trigger: GCATTGCCACCACCACAGCCAGCGCCGCCACTGCTG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCTTGGCTCGAGGGGTaGCACCAATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPWLEG*HQWRQQ
Trigger: CTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGCCTACTCCTCTTATaGTCCCTTCTAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGLLLL*SLLDPE
Trigger: CTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACCAGCATCTCTACCCTaGCTTGGAGCTGTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPPASLP*LGAVCC
Trigger: ACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATTTTCTTCTTCGAAGTaGCCCCGCTCAGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPFSSSK*PRSASS
Trigger: GCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGCCTGTTCTTGCTGTTaGAGGGTCTGTGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKACSCC*RVCASW
Trigger: CCAGCTAGCACAGACCCTCCAACAGCAAGAACAGGC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCAGAATCTCCAGCTTaGCAGCCTTCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPAESPA*QPSPSP
Trigger: TGGAGAAGGAGAAGGCTGCCAAGCTGGAGATTCTGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGATCTGGAGCTCGCTGTaGGATTCTATGCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKIWSSL*DSMPAT
Trigger: GGTGGCAGGCATAGAATCCCACAGCGAGCTCCAGAT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTTCTCTTGGACCTGCTaGAGTGCTCTGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKFSWTC*SALARL
Trigger: CAACCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCTTTTCCTGCAGAGTaGAGAGGTCATCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSFPAE*RGHLQA
Trigger: AGCTTGCAGATGACCTCTCCACTCTGCAGGAAAAGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCTTTTCCTGCAGAGTaGAGAGGTCATCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSFPAE*RGHLQA
Trigger: AGCTTGCAGATGACCTCTCCACTCTGCAGGAAAAGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACCACCTCTTTGCTGGTaGCAGCCATCTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPPPLCW*QPSFPA
Trigger: TGCAGGAAAAGATGGCTGCCACCAGCAAAGAGGTGG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGTGTGCTGCAGAACTaGCGTCCCTGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKCVLQN*RPCCSS
Trigger: GGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATCCAGCTCTTTTATCTaGGCTGCCTCCAGACCACGA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSSSFI*AASRPR
Trigger: TCGTGGTCTGGAGGCAGCCCAGATAAAAGAGCTGGA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGCTCCTGCTGCTTCTaGCATTGCTGTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRCSCCF*HCCSSL
Trigger: CAAGCTGGAACAGCAATGCCAGAAGCAGCAGGAGCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGCGTTCTGCAGCTCTaGCACTGTTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKCVLQL*HCCWLS
Trigger: AGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGGGCCTGCTCTTTCTaGAAGAACTTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPRACSF*KNFSCH
Trigger: GTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCAGGGCCTGTGTGCTaGTGTGCTCGAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPGPVC*CARAAG
Trigger: CCCTGCAGCTCGAGCACACCAGCACACAGGCCCTGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTACTTCTCCCGGGCCTaGTCCAACTCCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKYFSRA*SNSTSR
Trigger: TCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGGCACCCTCATACTTaGCAGTCATCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRWHPHT*QSSPPA
Trigger: AGCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGGCACCCTCATACTTaGCAGTCATCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPWHPHT*QSSPPA
Trigger: AGCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
3UTR CAA 72 bp AGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTaGGCGAGCCCAATCACCAAGCTTCCTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: SHERGHNPMSSC*ASPITKLPEQL
Trigger: GAGCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGAGTGTCATCTTGGTaGTGCCAGACAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGVSSW*CQTVTP
Trigger: TGGAGTGACTGTCTGGCATCACCAAGATGACACTCC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGTGAAAGTTTTCCCTaGAGGATTTCGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGCESFP*RISFFS
Trigger: AGAGAAGAACGAAATCCTTCAGGGAAAACTTTCACA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCGCTGGGAGATAGGTaGGGCTGGTTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLALGDR*GWFSRD
Trigger: GTCCCTGGAGAACCAGCCTCACCTATCTCCCAGCGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCTTCATTAGCCACCTaGAGTTGCTGCTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRASLAT*SCCCRI
Trigger: GATTCTGCAGCAGCAACTTCAGGTGGCTAATGAAGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTTTTCTGCAGAAAACTaGACACAAAGTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLFSAEN*TQSPVS
Trigger: AGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAAAA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTCTCATCAGCAAGCTaGTTCTTCAGCCGTCTCATC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLSSAS*FFSRLI
Trigger: GATGAGACGGCTGAAGAAGCAGCTTGCTGATGAGAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGGCGGTCAATGCGCTaGTGCATCATGGCTATCTGT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKRRSMR*CIMAIC
Trigger: ACAGATAGCCATGATGCAGCAGCGCATTGACCGCCT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGGGGTGGGTTATCCTaGAGCTGGGACAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKWGGLS*SWDKCS
Trigger: AGAACACTTGTCCCAGCTGCAGGATAACCCACCCCA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCCATGGCTGCTTCACAGCAAACACGTCCCAATCTAAGCCCACTTCTCTGTTCTTCTGCTGCTGCACCTTaGTGGCTTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PMAASQQTRPNLSPLLCSSAAAP*WLGQSQ
Trigger: CTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGA...AGAACAGAGAAGTGGGCTTAGATTGGGACGTGTTTGCTGTGAAGCAGCCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CAGCTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCTGGCTCAACTGGGCTTaGAGTTCATTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QLAMERKPAEVQSFTLEGWLNWA*SSFSWA
Trigger: GGCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCA...GCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp GCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCATTTTGAACGACGAGCAGAACTaGGAGTGGTGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: AMERKPAEVQSFTLEGILNDEQN*EWWGGS
Trigger: GCTACCGCCCCACCACTCGCAGTTCTGCTCGTCGTT...CAAAATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAAGTAGAAGCTGGAGCTaGTTTCTTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSRSWS*FLLGLS
Trigger: ACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTGTGGTGGTGGCAATaGGCGGAGAACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLWWWQ*AENGGF
Trigger: GAACCCGCCGTTCTCCGCGCATTGCCACCACCACAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATTCAAGGTTTCCAGCTaGAAGACATCACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRFKVSS*KTSPST
Trigger: GGTGCTGGGTGATGTCTTGCAGCTGGAAACCTTGAA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTATCAGGCTAGACAGCTaGTGCTTTTCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSIRLDS*CFSSSK
Trigger: CTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGAT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTTCTCTTTGGCCTGCTaGTTCAGGCCAGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKFSLAC*FRPASS
Trigger: AGAACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCAGAGATACAACGCTaGTGCTCTTCCAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSEIQR*CSSRAS
Trigger: AGATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACCTGAGCCAGATGCGTaGTCCTTTTCTTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRPEPDA*SFSFLA
Trigger: GGCTAAGAAAGAAAAGGAGCACGCATCTGGCTCAGG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGAAGAACTTCTCCTaGCACGCCTTCAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWKNFS*HAFNSW
Trigger: CCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCCTGTGTGCTGGTGTaGTCGAGCTGCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLACVLV*SSCRVE
Trigger: CTCCACCCTGCAGCTCGAGCACACCAGCACACAGGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAATCAGCACGTACGGCTaGCAACTCTTGGACATACTT +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRISTYG*QLLDIL
Trigger: AAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGAT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCATTCTCTGTGCTTCTCGCTaGACCTCAGCCAGACGGGTC +
Preference number: 4 (lower is better)
Translates to: LAMERKPAEVQSFTLEGILCASR*TSARRV
Trigger: GACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAG...AATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACCCTCTTCAGTGCCATaGATTCTGTCAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLPSSVP*ILSMIL
Trigger: CAAGATCATTGACAGAATCCATGGCACTGAAGAGGG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCCCTCTTCAGTGCCATaGATTCTGTCAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSPSSVP*ILSMIL
Trigger: CAAGATCATTGACAGAATCCATGGCACTGAAGAGGG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAGATACCAGGCATTCTaGGGAAGAGGGATGTTTTCG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGRYQAF*GRGMFS
Trigger: CGAAAACATCCCTCTTCCCCAGAATGCCTGGTATCT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGGTATAAGAGCAGCATaGTCATCTTCGCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGGIRAA*SSSPVP
Trigger: TGGAACTGGCGAAGATGACCATGCTGCTCTTATACC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGAGCTCATGGTAGAGTaGTATAAGAGCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRELMVE*YKSSMV
Trigger: GACCATGCTGCTCTTATACCACTCTACCATGAGCTC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGACTGTTCCCAGTCCCTaGGACTTTTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKTVPSP*DFWSSW
Trigger: CCATGAGCTCCAAAAGTCCCAGGGACTGGGAACAGT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTTAGCCCGTCCTCATaGTCCAGCACAAATTTAAGA +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAFSPSS*SSTNLR
Trigger: TCTTAAATTTGTGCTGGACCATGAGGACGGGCTAAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTTTAGCCCGTCCTCATaGTCCAGCACAAATTTAAGA +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEFSPSS*SSTNLR
Trigger: TCTTAAATTTGTGCTGGACCATGAGGACGGGCTAAA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCTGTCTTCAGGTCCTaGCACTGCTTCAGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSVFRS*HCFRVS
Trigger: TGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAATTTTGCGATCCATCTaGCTCTTCTCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLILRSI*LFSVFR
Trigger: CCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAAT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTTCTCCTCCGAAAGCTaGTTGATTTTGCGATCCATC +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQFSSES*LILRSI
Trigger: GATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGGTTATCCTGCAGCTaGGACAAGTGTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGLSCS*DKCSSS
Trigger: GCTGGAAGAACACTTGTCCCAGCTGCAGGATAACCC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGACGCTGGTGCCGTCTaGCTGGGTACGAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLDAGAV*LGTRQL
Trigger: AAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCTGTTTAGTAGAAGCTaGAGCTGCTTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLFSRS*SCFLLG
Trigger: GCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGACTGTTTAGTAGAAGCTaGAGCTGCTTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRLFSRS*SCFLLG
Trigger: GCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAG...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGGCCTACTCCTCTTATaGTCCCTTCTAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPGLLLL*SLLDPE
Trigger: CTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATCATCTGCAAGCTTCTaGGCCCTGACTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSSASF*ALTSFS
Trigger: AGAGAAGGAAGTCAGGGCCCAGAAGCTTGCAGATGA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCACCTCTTTGCTGGTaGCAGCCATCTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPPLCW*QPSFPA
Trigger: TGCAGGAAAAGATGGCTGCCACCAGCAAAGAGGTGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGTGGTCTTGTACCTTaGTGCGGAAGGCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKCGLVP*CGRQPT
Trigger: AGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCGGCCTGCAGCTGCTaGCAGAGGTGCTTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSACSC*QRCLAG
Trigger: GCCAGCTAAGCACCTCTGCCAGCAGCTGCAGGCCGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCATTGCTGCTCTGCATAGCTaGCCTTCTCTGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAMERKPAEVQSFTLEGIAALHS*PSLPAA
Trigger: AGCTGCGGGCAGAGAAGGCCAGCTATGCAGAGCAGC...AATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGGCACCCTCATACTTaGCAGTCATCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKWHPHT*QSSPPA
Trigger: AGCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLVPSG*VRGSLL
Trigger: GAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS-3UTR TCA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGACAGCCAACTCAGCCTaGATTTTATATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGTANSA*ILYSNC
Trigger: ACAGTTTGAATATAAAATTCAGGCTGAGTTGGCTGT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGAAGCTGGAGAACCTaGGAGAAAGTTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPRSWRT*EKVVPT
Trigger: AGTGGGAACAACTTTCTCTCAGGTTCTCCAGCTTCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTTCTGGCTCTTCTCTaGCTCGGCCATCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLLALL*LGHHQP
Trigger: CGGCTGGTGATGGCCGAGTCAGAGAAGAGCCAGAAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CGTCAACCTGGCACACACACCTATGGATGCTTTCAAGACTCAGCAGGAGCGATAACCAAGGAAAGCACTTaGCCTGGGCCTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RQPGTHTYGCFQDSAGAITKEST*PGPSFQ
Trigger: CTGAAAGGAAGGCCCAGGTCAAGTGCTTTCCTTGGT...TATCGCTCCTGCTGAGTCTTGAAAGCATCCATAGGTGTGTGTGCCAGGTTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTTTCTGCAGAAAACTaGACACAAAGTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAFSAEN*TQSPVS
Trigger: AGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAAAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCTCTCATCAGCAAGCTaGTTCTTCAGCCGTCTCATC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKLSSAS*FFSRLI
Trigger: GATGAGACGGCTGAAGAAGCAGCTTGCTGATGAGAG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTCCGCAGCTGCTCCTaGAGCTCTTGGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLRSCS*SSWFCC
Trigger: GCAGCAGAACCAAGAGCTGCAGGAGCAGCTGCGGAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCCAGGTCTCGAAGCTaGTGGTCTGCATGGGCAACC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPRSRS*WSAWAT
Trigger: GGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCATTTTGGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCG +
Preference number: 4 (lower is better)
Translates to: AMERKPAEVQSFTLEGILVMLMI*VVRRRA
Trigger: CGCTCGTCGGCGCACCACGCAGATCATCAACATCAC...CAAAATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp AGCTTAGTCAGGCTCTTTCACAGCCTCTGTTCACACTGCTCTTCTCGTCAACCTGCTGCAGCTCTGCAATaGGGTTCCAGTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLVRLFHSLCSHCSSRQPAAALQ*GSSHPA
Trigger: AGCTGGATGACTGGAACCGCATTGCAGAGCTGCAGC...AGGTTGACGAGAAGAGCAGTGTGAACAGAGGCTGTGAAAGAGCCTGACTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGGGGGCACACTCGATTaGGCTGCTGCAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLGGTLD*AAAALQ
Trigger: TTGCAGAGCTGCAGCAGCGCAATCGAGTGTGCCCCC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCTATCTGGATTGGCTaGATGCTGGCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLAIWIG*MLARRR
Trigger: CCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGTAGAAGCTGGAGCTaGTTTCTTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSRSWS*FLLGLS
Trigger: ACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGGCTAGACAGCTGCTaGTTTTCTTCTTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPRLDSC*FSSSKW
Trigger: CCACTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCATCAGGCTAGACAGCTaGTGCTTTTCTTCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGIRLDS*CFSSSK
Trigger: CTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGAT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAACTGCTGCTCCTTCTaGTTCAGGCTACTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKNCCSF*FRLLLS
Trigger: GCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCAGCAGTGGCCAGTTaGTGGGCATGGTCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLAAVAS*WAWSCL
Trigger: TAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCAGTTGCTTTTTGCTaGTCAGACCGCAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSVAFC*SDRSCN
Trigger: GTTGCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTCTTCCAGGGCATCTaGAGCCCTGCGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLFQGI*SPALLL
Trigger: GAGGAGAAGCGCAGGGCTGCAGATGCCCTGGAAGAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTTCTCCTTTGCCTCCTaGAGCTCCTGGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLFSFAS*SSWRAF
Trigger: GAAGGCCCGCCAGGAGCTGCAGGAGGCAAAGGAGAA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCGCTGCCTGTGTGCTaGAGAACTGGCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLALPVC*RTGVPV
Trigger: AACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGTTGCTTCACGGTTTaGCGAAGTTCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSCFTV*RSSSSS
Trigger: AGAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAATCAGCACGTACGGCTaGCAACTCTTGGACATACTT +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRISTYG*QLLDIL
Trigger: AAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGAT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGAGCTCATGGTAGAGTaGTATAAGAGCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRELMVE*YKSSMV
Trigger: GACCATGCTGCTCTTATACCACTCTACCATGAGCTC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTTTAGCCCGTCCTCATaGTCCAGCACAAATTTAAGA +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQFSPSS*SSTNLR
Trigger: TCTTAAATTTGTGCTGGACCATGAGGACGGGCTAAA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGGGCTCCAGTGGGCTaGCCGCCTGCTTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLWAPVG*PPASHS
Trigger: TGAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCTGTCTTCAGGTCCTaGCACTGCTTCAGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSVFRS*HCFRVS
Trigger: TGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAATTTTGCGATCCATCTaGCTCTTCTCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRILRSI*LFSVFR
Trigger: CCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAAT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTTCTCCTCCGAAAGCTaGTTGATTTTGCGATCCATC +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGFSSES*LILRSI
Trigger: GATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTACCTCGCCCTTCTCCTaGGGTGGGTTATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLTSPFS*GGLSCS
Trigger: GCTGCAGGATAACCCACCCCAGGAGAAGGGCGAGGT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCATCATAATGTGTTTTaGCTTTCTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAEHHNVF*LSPSAA
Trigger: AGCTGCAGATGGAGAAAGCCAAAACACATTATGATG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCATCATAATGTGTTTTaGCTTTCTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHPSASLGKVGCELLLKAHHNVF*LSPSAA
Trigger: AGCTGCAGATGGAGAAAGCCAAAACACATTATGATG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGCTGCTGGTCTGCATaGGCAACCTGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSCWSA*ATCASR
Trigger: CCTGGAGGCACAGGTTGCCCATGCAGACCAGCAGCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TTCCCATCCTTACTACAAGCAGATGAGGTCAAGCAGCCCATCTCTCTGATTTTTCCAGGGATTCTACCTTaGGGGGCAGGCGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FPSLLQADEVKQPISLIFPGILP*GAGAGR
Trigger: TCTCCCAGCGCCTGCCCCCCAAGGTAGAATCCCTGG...AAAAATCAGAGAGATGGGCTGCTTGACCTCATCTGCTTGTAGTAAGGATGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CTCAGAGGGTTGTTGGGGGACAAATCAGGTATAATTGTCATGAGTGCTTTATGTGCTCGCAGGCTAGCCTaGGAAGCAGGAGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: LRGLLGDKSGIIVMSALCARRLA*EAGADR
Trigger: GCGGTCTGCTCCTGCTTCCCAGGCTAGCCTGCGAGC...ACATAAAGCACTCATGACAATTATACCTGATTTGTCCCCCAACAACCCTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTGTTTAGTAGAAGCTaGAGCTGCTTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLFSRS*SCFLLG
Trigger: GCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCATCGGGGACACAGGTaGGGCCACTCACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLHRGHR*GHSLVL
Trigger: CAGTACCAGTGAGTGGCCCCACCTGTGTCCCCGATG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAATCTCTACCCTGGCTTaGAGCTGTGTGTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPISTLA*SCVLFA
Trigger: TGCAAACAACACACAGCTCCAAGCCAGGGTAGAGAT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCCAGTTGCTGGGCATaGTCCTGCCTAGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLASCWA*SCLVAS
Trigger: GGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCTGCTGGAGTGCTCTaGCCAGGTTGGCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPAGVL*PGWHGA
Trigger: AGCTCCATGCCAACCTGGCCAGAGCACTCCAGCAGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCTGCTCTGCATAGCTaGCCTTCTCTGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLAALHS*PSLPAA
Trigger: AGCTGCGGGCAGAGAAGGCCAGCTATGCAGAGCAGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TTTCAAGACTCAGCAGGAGCGATAGCTTCCACGAAGCCTTTCTTGACCACTTGCCCCACCAGATGCCCATaGCTGCTTCACAGCAAACAC +
Preference number: 4 (lower is better)
Translates to: FQDSAGAIASTKPFLTTCPTRCP*LLHSKH
Trigger: GTGTTTGCTGTGAAGCAGCCATGGGCATCTGGTGGG...GCAAGTGGTCAAGAAAGGCTTCGTGGAAGCTATCGCTCCTGCTGAGTCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCCTCCTCCAGCTTCTaGCTCTTCTCTGACTCGGCC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPSSSF*LFSDSA
Trigger: GGCCGAGTCAGAGAAGAGCCAGAAGCTGGAGGAGGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616538.4
CDS-3UTR TCA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGACAGCCAACTCAGCCTaGATTTTATATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: RAGITVSRGLATVGLGAETANSA*ILYSNC
Trigger: ACAGTTTGAATATAAAATTCAGGCTGAGTTGGCTGT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGTGCATCCTTCTCGGTaGGGAGCTTGCGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLVHPSR*GACGSQ
Trigger: CTGAGAACCGCAAGCTCCTCACCGAGAAGGATGCAC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCTCCGTCAGCTCATTaGGGGCATCCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPPSAH*GHPVAA
Trigger: AGCAGCTACAGGATGCCCTCAATGAGCTGACGGAGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGTGAAAGTTTTCCCTaGAGGATTTCGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCESFP*RISFFS
Trigger: AGAGAAGAACGAAATCCTTCAGGGAAAACTTTCACA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGTGAAAGTTTTCCCTaGAGGATTTCGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSCESFP*RISFFS
Trigger: AGAGAAGAACGAAATCCTTCAGGGAAAACTTTCACA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCATCTCCTCATCTGTaGTGGTGCCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSSPHL*WCPGSG
Trigger: CCCTGAGCCTGGGCACCATCACAGATGAGGAGATGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTCAGATTGGGCTCCTaGGCCAGATGCGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLRLGS*ARCVLL
Trigger: AAGGAGCACGCATCTGGCTCAGGAGCCCAATCTGAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CTCAGAGGGTTGTTGGGGGACAAATCAGGTATAATTGTCATGAGTGCTTTATGTTCTGCCCGCAGCTGCTaGGCTGTTCGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LRGLLGDKSGIIVMSALCSARSC*AVRSCS
Trigger: AGAGCAGGAGCGAACAGCTCAGCAGCTGCGGGCAGA...ACATAAAGCACTCATGACAATTATACCTGATTTGTCCCCCAACAACCCTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp GCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCATTTTGTCTCCTCCAGGACCTTaGCCTTGGCACCCTCATACT +
Preference number: 4 (lower is better)
Translates to: AMERKPAEVQSFTLEGILSPPGP*PWHPHT
Trigger: AGTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGA...CAAAATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATTAGTTTGCTCTCTCTaGAATACCTCTAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRLVCSL*NTSSCS
Trigger: GGAGCAGCTAGAGGTATTTCAGAGAGAGCAAACTAA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393695.8
CDS-3UTR TCA 90 bp ATAGTCGGTCTCCAATGGGCCTTCCTGGCCTCACATCTCAGCTTAGTCAGGCTCCCACGAAGCCTTTCTTaGCCACTTGCTTTTTATTCC +
Preference number: 4 (lower is better)
Translates to: IVGLQWAFLASHLSLVRLPRSLS*PLAFYS
Trigger: GGAATAAAAAGCAAGTGGTCAAGAAAGGCTTCGTGG...GAGCCTGACTAAGCTGAGATGTGAGGCCAGGAAGGCCCATTGGAGACCGACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATTTTCTGCAGAAAACTaGACACAAAGTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLFSAEN*TQSPVS
Trigger: AGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAAAA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGGGCTAGGCGGTCAATaGGCTGCTGCATCATGGCTA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLGLGGQ*AAASWL
Trigger: TAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTACTCCTGAGTGGCCTTaGTGTGCTCCTCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLTPEWP*CAPPSA
Trigger: AGCTGACGGAGGAGCACAGCAAGGCCACTCAGGAGT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGGCATTTCTTGTCCTaGAGGGCTGCGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLRHFLS*RAALSS
Trigger: GGAGCTCAGCGCAGCCCTGCAGGACAAGAAATGCCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TTTCAAGACTCAGCAGGAGCGATAGCTTCCACGAAGCCTTTCTTGACCACTTGCTTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FQDSAGAIASTKPFLTTCLPPGI*PGLEAA
Trigger: AGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAA...GCAAGTGGTCAAGAAAGGCTTCGTGGAAGCTATCGCTCCTGCTGAGTCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGTGATGTTGATGATCTaGGTGGTGCGCCGACGAGCG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLVMLMI*VVRRRA
Trigger: CGCTCGTCGGCGCACCACGCAGATCATCAACATCAC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TGCTCTTCTCGTCAACCTGGCACACACACCTATGGATGCTTTCAAGACTCAGCAGCTCATCCTGGCAAGTaGCCATGTAGAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CSSRQPGTHTYGCFQDSAAHPGK*PCRSCS
Trigger: GGAACAGCTTCTACATGGGCACTTGCCAGGATGAGC...TGCTGAGTCTTGAAAGCATCCATAGGTGTGTGTGCCAGGTTGACGAGAAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGTGCTAGCTGGGCCTaGTTCTCTTTGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLCASWA*FSLACC
Trigger: GCAGCAGGCCAAAGAGAAGCAGGCCCAGCTAGCACA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTTGGACCTGCTGGAGTaGTCTGGCCAGGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLDLLE*SGQVGM
Trigger: CATGCCAACCTGGCCAGAGCACTCCAGCAGGTCCAA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCTTCCTGGAACCGCTaGCTCTCCTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSSWNR*LSSRTL
Trigger: CAAGGTCCTGGAGGAGAGGCAGCGGTTCCAGGAAGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TTTCAAGACTCAGCAGGAGCGATAGCTTCCACGAAGCCTTTCTTGACCACTTGCGGGTACGAGGCAGCTTaGTATGGAAAGGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: FQDSAGAIASTKPFLTTCGYEAA*YGKETC
Trigger: GCAGGTTTCCTTTCCATAGCAAGCTGCCTCGTACCC...GCAAGTGGTCAAGAAAGGCTTCGTGGAAGCTATCGCTCCTGCTGAGTCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTCCAATGCGCCTCCTaGTGGAAGCCTCCACACACT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLQCAS*WKPPHT
Trigger: AGTGTGTGGAGGCTTCCACCAGGAGGCGCATTGGAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351960.10
ENST00000393695.8
ENST00000613205.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGGTATAAGAGCAGCATaGTCATCTTCGCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKGIRAA*SSSPVP
Trigger: TGGAACTGGCGAAGATGACCATGCTGCTCTTATACC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TTTCAAGACTCAGCAGGAGCGATAGCTTCCACGAAGCCTTTCTTGACCACTTGCTGCACCTTGCTGGCTTaGTCAGAGTCAGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: FQDSAGAIASTKPFLTTCCTLLA*SESASF
Trigger: GAAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCA...GCAAGTGGTCAAGAAAGGCTTCGTGGAAGCTATCGCTCCTGCTGAGTCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLAAAPC*LGQSQP
Trigger: TGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CAGCTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCTCCTTCTGGCTCAACTaGGCTTGCAGTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: QLAMERKPAEVQSFTLEGSFWLN*ACSSFS
Trigger: GCTGAATGAACTGCAAGCCCAGTTGAGCCAGAAGGA...GCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AGCTTAGTCAGGCTCTTTCACAGCCTCTGTTCACACTGCTCTTCTCGTCAACCTGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SLVRLFHSLCSHCSSRQPASVAT*NLPRSR
Trigger: TCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGC...AGGTTGACGAGAAGAGCAGTGTGAACAGAGGCTGTGAAAGAGCCTGACTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCTGTTTAGTAGAAGCTaGAGCTGCTTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKLFSRS*SCFLLG
Trigger: GCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGGAAAGAGCATCCTCTaGCAGGTGCTCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLGKSIL*QVLPPG
Trigger: ACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGACAGCCAACTCAGCCTaGATTTTATATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQTANSA*ILYSNC
Trigger: ACAGTTTGAATATAAAATTCAGGCTGAGTTGGCTGT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAACAGCCAACTCAGCCTaGATTTTATATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLTANSA*ILYSNC
Trigger: ACAGTTTGAATATAAAATTCAGGCTGAGTTGGCTGT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTACAGCCAACTCAGCCTaGATTTTATATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: PTPLLRHRAHPSWERASSTANSA*ILYSNC
Trigger: ACAGTTTGAATATAAAATTCAGGCTGAGTTGGCTGT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGTGAAAGTTTTCCCTaGAGGATTTCGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGCESFP*RISFFS
Trigger: AGAGAAGAACGAAATCCTTCAGGGAAAACTTTCACA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTTCCACCTGGGCAGTaGGTTTCTGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLPPGQ*VSASLP
Trigger: AGGAAGAGAGGCAGAAACTCACTGCCCAGGTGGAAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp ATAATCCAATGTCGTCCTGCTTGGCGAGCCCAATCACCAAGCTTCCTGAACAGCACTGACAGAGGAAGATaGGTGGTGACAAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: IIQCRPAWRAQSPSFLNSTDRGR*VVTSQE
Trigger: TTCTTGGCTTGTCACCACTCATCTTCCTCTGTCAGT...GCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCTGCAGCTCTGCAATaGGGTTCCAGTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLAAALQ*GSSHPA
Trigger: AGCTGGATGACTGGAACCGCATTGCAGAGCTGCAGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGGGAGGCCTGTTCTTaGTGTTGGAGGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLWEACS*CWRVCA
Trigger: AGCACAGACCCTCCAACAGCAAGAACAGGCCTCCCA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGCTCAGACCGCAGCTaGAACTCTAGCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLCSDRS*NSSSAT
Trigger: GGTTGCAGAGCTAGAGTTGCAGCTGCGGTCTGAGCA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGCGGGCCACCTCTTTaGTGGTGGCAGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSGPPL*WWQPSF
Trigger: AAAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTGTCAGCCTGCTCCTaGTGCTTCTGGCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLSACS*CFWHCC
Trigger: ACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGACAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGCAGAGCTGCGTTCTaGAGCTCTGGCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSRAAF*SSGTVA
Trigger: AGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGATTTTGCGATCCATCTaGCTCTTCTCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKILRSI*LFSVFR
Trigger: CCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAAT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCATCATAATGTGTTTTaGCTTTCTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASLSLGVWLLLAWELREGHHNVF*LSPSAA
Trigger: AGCTGCAGATGGAGAAAGCCAAAACACATTATGATG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGCTGGGGCTTAGCCTaGGGCTCACGGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSWGLA*GSRLFK
Trigger: TTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGCTCTTCCTTGGCCTaGCTGAGGTTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSSSLA*LRLEME
Trigger: CTCCATCTCCAACCTCAGCCAGGCCAAGGAAGAGCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTATCTGGAGCTCGCTGTaGGATTCTATGCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLIWSSL*DSMPAT
Trigger: GGTGGCAGGCATAGAATCCCACAGCGAGCTCCAGAT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTTCTCTTGGACCTGCTaGAGTGCTCTGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLFSWTC*SALARL
Trigger: CAACCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCCTTCTCCTCTAACTaGCCCTGCAGAGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLAFSSN*PCRVSR
Trigger: TCTGGAGACTCTGCAGGGCCAGTTAGAGGAGAAGGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCCTTCTCCAGGACCTaGCGATTCAGGATGGACACC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSFSRT*RFRMDT
Trigger: GGTGTCCATCCTGAATCGCCAGGTCCTGGAGAAGGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTACTTCTCCCGGGCCTaGTCCAACTCCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLYFSRA*SNSTSR
Trigger: TCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCTAGCTGCTCCACCTaGGCAGTGAGTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSSCST*AVSFCL
Trigger: GAGGCAGAAACTCACTGCCCAGGTGGAGCAGCTAGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393695.8
CDS-3UTR TCA 90 bp AGAAGGCATTTTGTCCAGCCCTTTTTGAAAGTGACCATTTCCCATCCTTACTACCGTGCTGTAGAACGATaGGTTGGCGCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RRHFVQPFLKVTISHPYYRAVER*VGAVWL
Trigger: GAGCCAGACAGCGCCAACTCATCGTTCTACAGCACG...GTAGTAAGGATGGGAAATGGTCACTTTCAAAAAGGGCTGGACAAAATGCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CTCAGAGGGTTGTTGGGGGACAAATCAGGTATAATTGTCATGAGTGCTTTATGTAGGAAGGCTGCCTCCTaGCCTGGTGATACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LRGLLGDKSGIIVMSALCRKAAS*PGDTEW
Trigger: CCACTCAGTATCACCAGGTCAGGAGGCAGCCTTCCT...ACATAAAGCACTCATGACAATTATACCTGATTTGTCCCCCAACAACCCTCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLSDTG*FKICCP
Trigger: GGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCGGTCAATGCGCTGCTaGATCATGGCTATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLRSMRC*IMAICA
Trigger: TGCACAGATAGCCATGATGCAGCAGCGCATTGACCG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGGCGGTCAATGCGCTaGTGCATCATGGCTATCTGT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLRRSMR*CIMAIC
Trigger: ACAGATAGCCATGATGCAGCAGCGCATTGACCGCCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTTCAGGTCCTGGCACTaGTTCAGGGTTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLFRSWH*FRVSCS
Trigger: GCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGGGGTGGGTTATCCTaGAGCTGGGACAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLWGGLS*SWDKCS
Trigger: AGAACACTTGTCCCAGCTGCAGGATAACCCACCCCA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TTTCTCCTAAACCTTTCAATTACAGCCACCAAGGTTTCCTCAATGCCTTTAGGACCCAGGTCTCGAAGCTaGTGGTCTGCATGGGCAACC +
Preference number: 4 (lower is better)
Translates to: FLLNLSITATKVSSMPLGPRSRS*WSAWAT
Trigger: GGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGG...TCCTAAAGGCATTGAGGAAACCTTGGTGGCTGTAATTGAAAGGTTTAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLPPGI*PGLEAA
Trigger: AGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTTCCAGTCATCCAGCTaGTCAGGCTCATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLFQSSS*SGSSWQ
Trigger: TTGCCAGGATGAGCCTGAGCAGCTGGATGACTGGAA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGAGCTGTGTGTTGTTTaGAGCAAGAGTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLELCVV*SKSGCL
Trigger: GAGGCAGCCACTCTTGCTGCAAACAACACACAGCTC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCTGCTTCAGGCTACTaGTTAGCTGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSASGY*LAAPPG
Trigger: ACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGAGATACAACGCTGCTaGTCTTCCAGGGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLEIQRC*SSRASA
Trigger: TGCAGATGCCCTGGAAGAGCAGCAGCGTTGTATCTC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp TTCCCATCCTTACTACAAGCAGATGAGGTCAAGCAGCCCATCTCTCTGATTTTTTGGGCAGTGAGTTTCTaGCTCTCTTCCTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: FPSLLQADEVKQPISLIFWAVSF*LSSWNR
Trigger: GCGGTTCCAGGAAGAGAGGCAGAAACTCACTGCCCA...AAAAATCAGAGAGATGGGCTGCTTGACCTCATCTGCTTGTAGTAAGGATGGGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp ATAGTCGGTCTCCAATGGGCCTTCCTGGCCTCACATCTCAGCTTAGTCAGGCTCCCTTTCTTGACCACTTaGTTTTTATTCCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: IVGLQWAFLASHLSLVRLPFLTT*FLFQLC
Trigger: GCACAGTTGGAATAAAAAGCAAGTGGTCAAGAAAGG...GAGCCTGACTAAGCTGAGATGTGAGGCCAGGAAGGCCCATTGGAGACCGACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACATCATAATGTGTTTTaGCTTTCTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPHHNVF*LSPSAA
Trigger: AGCTGCAGATGGAGAAAGCCAAAACACATTATGATG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLASVAT*NLPRSR
Trigger: TCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCACCTCTTTGCTGGTaGCAGCCATCTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPPLCW*QPSFPA
Trigger: TGCAGGAAAAGATGGCTGCCACCAGCAAAGAGGTGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCCAGCTCTTTTATCTaGGCTGCCTCCAGACCACGA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSSSFI*AASRPR
Trigger: TCGTGGTCTGGAGGCAGCCCAGATAAAAGAGCTGGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCTTCAGCCTTGCTGTaGTCTTGTACCTTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSSALL*SCTLVR
Trigger: CCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTCAGTTCTTCCACCTaGGCAGTGAGTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLSSST*AVSFCL
Trigger: GAGGCAGAAACTCACTGCCCAGGTGGAAGAACTGAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp AGAAGGCATTTTGTCCAGCCCTTTTTGAAAGTGACCATTTCCCATCCTTACTACACCACTGGGGAACCTTaGGCAAGTGACTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: RRHFVQPFLKVTISHPYYTTGEP*ASDCPS
Trigger: AGAGGGGCAGTCACTTGCCCAAGGTTCCCCAGTGGT...GTAGTAAGGATGGGAAATGGTCACTTTCAAAAAGGGCTGGACAAAATGCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLIVLS*LLLLAQ
Trigger: TTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGTAGAAGCTGGAGCTaGTTTCTTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSRSWS*FLLGLS
Trigger: ACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGACAGTCACTCCAATaGGCCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLRQSLQ*ACNPSY
Trigger: GTAGCTGGGATTACAGGCGCATTGGAGTGACTGTCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358965.10
CDS-3UTR GCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTTCTCAGTTGCTTTTTaGTGCTCAGACCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLFSVAF*CSDRSC
Trigger: GCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR GCA 90 bp GCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCATTTTGATCAGCACGTACGGCTaGCAACTCTTGGACATACTT +
Preference number: 4 (lower is better)
Translates to: AMERKPAEVQSFTLEGILISTYG*QLLDIL
Trigger: AAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGAT...CAAAATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp TGCTCTTCTCGTCAACCTGGCACACACACCTATGGATGCTTTCAAGACTCAGCACTCTGTTCTTCCTCCTaGATCTCCCATTTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: CSSRQPGTHTYGCFQDSALCSSS*ISHFSE
Trigger: TTCACTGAAATGGGAGATGCAGGAGGAAGAACAGAG...TGCTGAGTCTTGAAAGCATCCATAGGTGTGTGTGCCAGGTTGACGAGAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCTCATCTGGAACTGTaGGGTCTGCAGGATATCACC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSHLEL*GLQDIT
Trigger: GGTGATATCCTGCAGACCCCACAGTTCCAGATGAGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGTAGAACGATGAGTTaGCGCTGTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLCRTMS*RCLALP
Trigger: TGGAAGAGCCAGACAGCGCCAACTCATCGTTCTACA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp TTCCCATCCTTACTACAAGCAGATGAGGTCAAGCAGCCCATCTCTCTGATTTTTCTTACTACAAGCAGATaGGGTCAAGCAGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: FPSLLQADEVKQPISLIFLTTSR*GQAAHL
Trigger: GAGATGGGCTGCTTGACCTCATCTGCTTGTAGTAAG...AAAAATCAGAGAGATGGGCTGCTTGACCTCATCTGCTTGTAGTAAGGATGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR GCA 90 bp TTTCTCCTAAACCTTTCAATTACAGCCACCAAGGTTTCCTCAATGCCTTTAGGACCTTGGGCAAGTGACTaGCCCTCTATGCCCCAGATT +
Preference number: 4 (lower is better)
Translates to: FLLNLSITATKVSSMPLGPWASD*PSMPQI
Trigger: AATCTGGGGCATAGAGGGGCAGTCACTTGCCCAAGG...TCCTAAAGGCATTGAGGAAACCTTGGTGGCTGTAATTGAAAGGTTTAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGATACCAGGCATTCTaGGGAAGAGGGATGTTTTCG +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLRYQAF*GRGMFS
Trigger: CGAAAACATCCCTCTTCCCCAGAATGCCTGGTATCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGAGCTCATGGTAGAGTaGTATAAGAGCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLELMVE*YKSSMV
Trigger: GACCATGCTGCTCTTATACCACTCTACCATGAGCTC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTGAAAGTTGTTCCCACTaGAAGAGGAGGCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLESCSH*KRRQPS
Trigger: AGAAGGTTGCCTCCTCTTCCAGTGGGAACAACTTTC...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp ATAATCCAATGTCGTCCTGCTTGGCGAGCCCAATCACCAAGCTTCCTGAACAGCCATCATAATGTGTTTTaGCTTTCTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IIQCRPAWRAQSPSFLNSHHNVF*LSPSAA
Trigger: AGCTGCAGATGGAGAAAGCCAAAACACATTATGATG...GCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
3UTR CAA 72 bp GACTCAGCAGGAGCGATAGCTTCCACGAAGCCTTTCTaGACCACTTGCTTTTTATTCCAACTGTGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: DSAGAIASTKPF*TTCFLFQLCPK
Trigger: TTTAGGGCACAGTTGGAATAAAAAGCAAGTGGTCAAGAAAGGCTTCGTGGAAGCTATCGCTCCTGCTGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCCTCAAATCTGGTTGTaGTGGAGAAGTGACTTTGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLPQIWL*WRSDFA
Trigger: AGCAAAGTCACTTCTCCATCACAACCAGATTTGAGG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR TCA 90 bp AGAAGGCATTTTGTCCAGCCCTTTTTGAAAGTGACCATTTCCCATCCTTACTACGACTCATCATGGCACTaGCAGAGGAAGATGAGTGGT +
Preference number: 4 (lower is better)
Translates to: RRHFVQPFLKVTISHPYYDSSWH*QRKMSG
Trigger: ACCACTCATCTTCCTCTGTCAGTGCCATGATGAGTC...GTAGTAAGGATGGGAAATGGTCACTTTCAAAAAGGGCTGGACAAAATGCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR TCA 90 bp TTTCTCCTAAACCTTTCAATTACAGCCACCAAGGTTTCCTCAATGCCTTTAGGAGGAAAGGAAACCTGCTaGGGTACAGTCCTTCACGCT +
Preference number: 4 (lower is better)
Translates to: FLLNLSITATKVSSMPLGGKETC*GTVLHA
Trigger: AGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCC...TCCTAAAGGCATTGAGGAAACCTTGGTGGCTGTAATTGAAAGGTTTAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CCA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCATCATAATGTGTTTTaGCTTTCTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLHHNVF*LSPSAA
Trigger: AGCTGCAGATGGAGAAAGCCAAAACACATTATGATG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CCA 90 bp TTTCTCCTAAACCTTTCAATTACAGCCACCAAGGTTTCCTCAATGCCTTTAGGATGGCACACACACCTATaGATGCTTTCAAGACTCAGC +
Preference number: 4 (lower is better)
Translates to: FLLNLSITATKVSSMPLGWHTHL*MLSRLS
Trigger: GCTGAGTCTTGAAAGCATCCATAGGTGTGTGTGCCA...TCCTAAAGGCATTGAGGAAACCTTGGTGGCTGTAATTGAAAGGTTTAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS CCA 90 bp CGCAGTCCCCCAGCGGCCTGCTTGCTCTGCTCCAGCTCCTCACGGTaGCGTTTCTCGGCAGCGGCCTGCTCGGCCTGCAGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RSPPAACLLCSSSSR*RFSAAACSACSCWQ
Trigger: CTGCCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAAACGCCACCGTGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CAGAGGAATCAGCTCCCCAAGCTCCCGCTGGGCCCGCAGCAGCTCTaGCCGCAGTCCCCCAGCGGCCTGCTTGCTCTGCTCCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QRNQLPKLPLGPQQL*PQSPSGLLALLQLL
Trigger: GAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACTGCGGGCAGAGCTGCTGCGGGCCCAGCGGGAGCTTGGGGAGCTGATTCCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GGGTGGCACCAATGGCGGCAGCAGTGGCGGCGCTGGCTGTGGTGGTaGCAATGCGCGGAGAACGGCGGGTTCCACTGCGAGTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: GWHQWRQQWRRWLWW*QCAENGGFHCECWG
Trigger: CCCCCAACACTCGCAGTGGAACCCGCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCACTGCTGCCGCCATTGGTGCCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CCTTGGCTCGAGGGGTGGCACCAATGGCGGCAGCAGTGGCGGCGCTaGCTGTGGTGGTGGCAATGCGCGGAGAACGGCGGGTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: PWLEGWHQWRQQWRR*LWWWQCAENGGFHC
Trigger: GCAGTGGAACCCGCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TTGCCTTGCCCTTGGCTCGAGGGGTGGCACCAATGGCGGCAGCAGTaGCGGCGCTGGCTGTGGTGGTGGCAATGCGCGGAGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: LPCPWLEGWHQWRQQ*RRWLWWWQCAENGG
Trigger: CCCGCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TCTGCCACCTTCTGCCGCAGAGGAATCAGCTCCCCAAGCTCCCGCTaGGCCCGCAGCAGCTCTGCCCGCAGTCCCCCAGCGGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SATFCRRGISSPSSR*ARSSSARSPPAACL
Trigger: CAAGCAGGCCGCTGGGGGACTGCGGGCAGAGCTGCTGCGGGCCCAGCGGGAGCTTGGGGAGCTGATTCCTCTGCGGCAGAAGGTGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCCCCCAGCGGCCTGCTaGCTCTGCTCCAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVPPAAC*LCSSSS
Trigger: TGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GAGGGGTGGCACCAATGGCGGCAGCAGTGGCGGCGCTGGCTGTGGTaGTGGCAATGCGCGGAGAACGGCGGGTTCCACTGCGAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: EGWHQWRQQWRRWLW*WQCAENGGFHCECW
Trigger: CCAACACTCGCAGTGGAACCCGCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCCCTCGCAGGCTCCTaGACTAACTCCCGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVALAGS*TNSREA
Trigger: AGCCTCCCGGGAGTTAGTCAAGGAGCCTGCGAGGGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCCCCCAGCGGCCTGCTaGCTCTGCTCCAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDPPAAC*LCSSSS
Trigger: TGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CACCAATGGCGGCAGCAGTGGCGGCGCTGGCTGTGGTGGTGGCAATaGGCGGAGAACGGCGGGTTCCACTGCGAGTGTTGGGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: HQWRQQWRRWLWWWQ*AENGGFHCECWGKP
Trigger: AGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTTCTCCGCGCATTGCCACCACCACAGCCAGCGCCGCCACTGCTGCCGCCATTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTGCCGGCCAAGGTTGGCCCGCTCACCCAGCCCCCGGTTCTCCTCTaGCAGCAGGCCATGCGCCTTCTTCAGCATGCTCAGCTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LPAKVGPLTQPPVLL*QQAMRLLQHAQLLC
Trigger: GCAGAGCAGCTGAGCATGCTGAAGAAGGCGCATGGCCTGCTGGCAGAGGAGAACCGGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CCCGGGCCTGGTCCAACTCCACTTCCAGAAACTGCCGGCCAAGGTTaGCCCGCTCACCCAGCCCCCGGTTCTCCTCTGCCAGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: PGPGPTPLPETAGQG*PAHPAPGSPLPAGH
Trigger: ATGGCCTGCTGGCAGAGGAGAACCGGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGAGTTGGACCAGGCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCGCTCAGCAAGCAGCTaGGCTTCCTGCTGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDRSASS*ASCWPR
Trigger: GCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAAACTGCCGGCCAAGGTaGGCCCGCTCACCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPNCRPR*ARSPSP
Trigger: GGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGTT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp AGCTCAGAGGTCAGAGAGGCCACCTGGGCAGTCAACCGGGCCCCATaGGCCTGGGAGGCCTGCTCCAGCTCTTCCTTGGCCTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSEVREATWAVNRAP*AWEACSSSSLAWLR
Trigger: CCTCAGCCAGGCCAAGGAAGAGCTGGAGCAGGCCTCCCAGGCTCATGGGGCCCGGTTGACTGCCCAGGTGGCCTCTCTGACCTCTGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp GTTCCAGGGCCCTGGTGGGGCTCTAGGGAGACCCGTTTGCGCTGCTaGCGGGTGGTGATGCCAGTGCCCTCGGCTATCTGGATTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VPGPWWGSRETRLRC*RVVMPVPSAIWIGC
Trigger: GCAGCCAATCCAGATAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGCGCAAACGGGTCTCCCTAGAGCCCCACCAGGGCCCTGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CACACGCTGCTCGTTGAGGGCGTTCTGCAGCCGCATCTCAAGCTCTaGTCTGGCCGCCTTCTCCAGGGCAAGGTCAGCCTGGGCACGGCC +
Preference number: 5 (lower is better)
Translates to: HTLLVEGVLQPHLKL*SGRLLQGKVSLGTA
Trigger: GGCCGTGCCCAGGCTGACCTTGCCCTGGAGAAGGCGGCCAGAGCAGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTCCCGGAGGCTCTGCACCTCCTCCCGCAGAGCAGAGCTGCGTTCTaGAGCTCTGGCACTGTTGCTGGCTGTCTCTGCCTGCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LPEALHLLPQSRAAF*SSGTVAGCLCLQQA
Trigger: CGCCTGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGGAGGAGGTGCAGAGCCTCCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TCCAGCTCCTCACGGTGGCGTTTCTCGGCAGCGGCCTGCTCGGCCTaGAGCTGCTGGCAGAGGTGCTTAGCTGGCAGCAGCTCACTCACC +
Preference number: 5 (lower is better)
Translates to: SSSSRWRFSAAACSA*SCWQRCLAGSSSLT
Trigger: GGTGAGTGAGCTGCTGCCAGCTAAGCACCTCTGCCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAAACGCCACCGTGAGGAGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TTGCTCTGCTCCAGCTCCTCACGGTGGCGTTTCTCGGCAGCGGCCTaGTCGGCCTGCAGCTGCTGGCAGAGGTGCTTAGCTGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLCSSSSRWRFSAAA*SACSCWQRCLAGSS
Trigger: GCTGCTGCCAGCTAAGCACCTCTGCCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAAACGCCACCGTGAGGAGCTGGAGCAGAGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CACTCCAATGCGCCTTCTGCGTGGCAAGGCCAGGATGCCGTGCTGTaGCCGCTCCTCCCCCTCCGCCACCCAAACAAGAAGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: HSNAPSAWQGQDAVL*PLLPLRHPNKKPRQ
Trigger: CTGCCTGGGCTTCTTGTTTGGGTGGCGGAGGGGGAGGAGCGGGCACAGCACGGCATCCTGGCCTTGCCACGCAGAAGGCGCATTGGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CCA 90 bp CCCTTTAGTGCTTTGCCTTGCCCTTGGCTCGAGGGGTGGCACCAATaGCGGCAGCAGTGGCGGCGCTGGCTGTGGTGGTGGCAATGCGCG +
Preference number: 5 (lower is better)
Translates to: PFSALPCPWLEGWHQ*RQQWRRWLWWWQCA
Trigger: CGCGCATTGCCACCACCACAGCCAGCGCCGCCACTGCTGCCGCCATTGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAAGCGAATCTCCCTCTaGGCCTGGTGGCTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAKRISL*AWWLGG
Trigger: CCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGCGAATCTCCCTCTaGGCCTGGTGGCTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVKRISL*AWWLGG
Trigger: CCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGCTTTGCCTTGCCCTaGGCTCGAGGGGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDCFALP*ARGVAP
Trigger: TGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGCA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGCCGAGATCGTGCCATaGCACTCCAGACTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVAEIVP*HSRLLV
Trigger: CACCAGGAGTCTGGAGTGCAATGGCACGATCTCGGC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358965.10
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGCTCAGCAAGCAGCTaGGCTTCCTGCTGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRSASS*ASCWPR
Trigger: GCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTGGGAGGCCTGTTCTaGCTGTTGGAGGGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALGGLF*LLEGLC
Trigger: GCACAGACCCTCCAACAGCAAGAACAGGCCTCCCAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGCTGCTCACCTGCCTaGCGCACCAAGGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWACCSPA*RTKVSK
Trigger: CTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACCCCCAGCGGCCTGCTaGCTCTGCTCCAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPPPAAC*LCSSSS
Trigger: TGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTGGGTACGAGGCAGCTaGCTCAGAGGGTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVWVRGS*LRGLLG
Trigger: CCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCCA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS GCA 90 bp CCTGCCCTCGCAGGCTCCTTGACTAACTCCCGGGAGGCTGTTTCCTaGTGCTCACCTGCCTTGCGCACCAAGGTCTCCAAGCGGGCCACC +
Preference number: 5 (lower is better)
Translates to: PALAGSLTNSREAVS*CSPALRTKVSKRAT
Trigger: GGTGGCCCGCTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTCCCGGGAGTTAGTCAAGGAGCCTGCGAGGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CGTTTGCGCTGCTGCCGGGTGGTGATGCCAGTGCCCTCGGCTATCTaGATTGGCTGCATGCTGGCTCGGCGCAGGGTCTCTTGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: RLRCCRVVMPVPSAI*IGCMLARRRVSWGS
Trigger: AGACCCCCAAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGCGCAAACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TGCGCGGAGAACGGCGGGTTCCACTGCGAGTGTTGGGGGAAGCCTTaGACAGGGCCTTCTTTGAGGCTCCCCGCCGCAGAAGGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: CAENGGFHCECWGKP*TGPSLRLPAAEGCS
Trigger: GGAACAGCCTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTTCTCCGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TGGTGGTGGCAATGCGCGGAGAACGGCGGGTTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGGCCTTCTTTGAGGCTCCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: WWWQCAENGGFHCEC*GKPWTGPSLRLPAA
Trigger: TGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTTCTCCGCGCATTGCCACCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CGGCCCCGGGCCACCTGGGCCTTCCACTCATCTTCAGCCTTGCTGTaGTCTTGTACCTTGGTGCGGAAGGCAGCCAACTCCCGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: RPRATWAFHSSSALL*SCTLVRKAANSRWA
Trigger: GGCCCAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CCTCCCGCAGAGCAGAGCTGCGTTCTGCAGCTCTGGCACTGTTGCTaGCTGTCTCTGCCTGCAGCAGGCGCAGCCCTCCTCCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PPAEQSCVLQLWHCC*LSLPAAGAALLQLL
Trigger: CAGAAGCTGGAGGAGGGCTGCGCCTGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616538.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTTCTCGGTGAGGAGCTaGCGGTTCTCAGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAFSVRS*RFSASS
Trigger: GGAGCTAGCTGAGAACCGCAAGCTCCTCACCGAGAA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTTCTCGGTGAGGAGCTaGCGGTTCTCAGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVFSVRS*RFSASS
Trigger: GGAGCTAGCTGAGAACCGCAAGCTCCTCACCGAGAA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCCTCCGTCAGCTCATaGAGGGCATCCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSSVSS*RASCSC
Trigger: GCAGCTACAGGATGCCCTCAATGAGCTGACGGAGGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCCCCACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCTGGCTCAACTGGGCTaGCAGTTCATTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: APLDTPAWERRAELRVVGLAQLG*QFIQLG
Trigger: GCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCAG...CCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTGCTCCTGCAGCTCTaGGTTCTGCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALLLQL*VLLLLG
Trigger: GCCAAGAAGCAGCAGAACCAAGAGCTGCAGGAGCAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGTCTGTTCAGCCTCCTaGGTCTTCAGCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDVCSAS*VFSPAC
Trigger: GCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGAC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAVATWN*PRSRSC
Trigger: GCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAAC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVVATWN*PRSRSC
Trigger: GCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAAC...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTGGGTACGAGGCAGCTaGCTGGTGATACTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVWVRGS*LVILSG
Trigger: CCCACTCAGTATCACCAGCAAGCTGCCTCGTACCCA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGGGTACGAGGCAGCTaGCTGGTGATACTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAWVRGS*LVILSG
Trigger: CCCACTCAGTATCACCAGCAAGCTGCCTCGTACCCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGGACAGGGCCTTCTTaGAGGCTCCCCGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGWTGPS*RLPAAE
Trigger: TTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTGGCCCTTTAGTGCTTaGCCTTGCCCTTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAWPFSA*PCPWLE
Trigger: CTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCCA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGCAGCAGTGGCCAGTaGCTGGGCATGGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGCSSGQ*LGMVLP
Trigger: AGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAAGCGGGCCACCTCTTaGCTGGTGGCAGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAKRATS*LVAAIF
Trigger: AAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCTT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCCACACGCTGCTCGTaGAGGGCGTTCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSTRCS*RAFCSR
Trigger: GCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGATGAGCCAGTGCCTCTaGCAGGGTAGCGAACTCCAC +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVMSQCL*QGSELH
Trigger: GTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCAT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCAGCTCTGGCACTGTaGCTGGCTGTCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAALAL*LAVSAC
Trigger: GCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCCCCCAGCGGCCTGCTaGCTCTGCTCCAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTPPAAC*LCSSSS
Trigger: TGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTACGGCTGCCAACTCTaGGACATACTTCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVYGCQL*DILLPG
Trigger: GCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTCTCCTCCAGGACCTaGACCTTGGCACCCTCATAC +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLSSRT*TLAPSY
Trigger: GTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp GTGCGGAAGGCAGCCAACTCCCGTTGGGCCGAGGCTAAGGCACTCTaGCTGTGCCCTAGCTCCTGGGCCTTCTCCTCTAACTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VRKAANSRWAEAKAL*LCPSSWAFSSNWPC
Trigger: GCAGGGCCAGTTAGAGGAGAAGGCCCAGGAGCTAGGGCACAGTCAGAGTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGCCTTCCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp GCCCTCGCAGGCTCCTTGACTAACTCCCGGGAGGCTGTTTCCTGCTaGTCACCTGCCTTGCGCACCAAGGTCTCCAAGCGGGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: ALAGSLTNSREAVSC*SPALRTKVSKRATS
Trigger: AGAGGTGGCCCGCTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGCAGGAAACAGCCTCCCGGGAGTTAGTCAAGGAGCCTGCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp ATAGCCTGCAGCGCTGCCTGTGTGCTGCAGAACTGGCGTCCCTGTTaGTCTTCCAGCCACTCGGGCTGTCTGTCTCCTGCCCTCGCAGGC +
Preference number: 5 (lower is better)
Translates to: IACSAACVLQNWRPC*SSSHSGCLSPALAG
Trigger: GCCTGCGAGGGCAGGAGACAGACAGCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CGGGAGGCCCGCTCAGCCTCGAGGCTGCGTTCCAGGCTGTCAGCCTaGTCCTGCTGCTTCTGGCATTGCTGTTCCAGCTTGCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: REARSASRLRSRLSA*SCCFWHCCSSLLTS
Trigger: AGAGGTGAGCAAGCTGGAACAGCAATGCCAGAAGCAGCAGGAGCAGGCTGACAGCCTGGAACGCAGCCTCGAGGCTGAGCGGGCCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp GCAGTCATCACCTCCAGCTCCCGGGCAGTGCTCTGTGCTTCTCGCTaGACCTCAGCCAGACGGGTCTCAGCATCAGCACGTACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AVITSSSRAVLCASR*TSARRVSASARTAA
Trigger: GGCAGCCGTACGTGCTGATGCTGAGACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGGAGGTGATGACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GCCTCCCGCTCCATAGCCTGCAGCGCTGCCTGTGTGCTGCAGAACTaGCGTCCCTGTTGCTCTTCCAGCCACTCGGGCTGTCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: ASRSIACSAACVLQN*RPCCSSSHSGCLSP
Trigger: AGGAGACAGACAGCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTATGGAGCGGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCGGCTGCTTCAAGATTaGCTGTCCCTCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWARLLQD*LSLFSA
Trigger: GGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCAGTCCCTGGGACTTTaGGAGCTCATGGTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAQSLGL*ELMVEW
Trigger: CCACTCTACCATGAGCTCCAAAAGTCCCAGGGACTG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTGCACCTTGCTGGCTaGGTCAGAGTCAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLHLAG*VRVSQF
Trigger: AAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDVATWN*PRSRSC
Trigger: GCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAAC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCGGCGCAGGGTCTCTaGGGGGTCTCCAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSAQGL*GVSSFH
Trigger: ATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCGA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCTAGGGAGACCCGTTaGCGCTGCTGCCGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSRETR*RCCRVV
Trigger: CACCACCCGGCAGCAGCGCAAACGGGTCTCCCTAGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCTAGGGAGACCCGTTaGCGCTGCTGCCGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSRETR*RCCRVV
Trigger: CACCACCCGGCAGCAGCGCAAACGGGTCTCCCTAGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCTAGGGAGACCCGTTaGCGCTGCTGCCGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSRETR*RCCRVV
Trigger: CACCACCCGGCAGCAGCGCAAACGGGTCTCCCTAGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGCTTTGCCTTGCCCTaGGCTCGAGGGGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCFALP*ARGVAP
Trigger: TGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGGCCCTTTAGTGCTTaGCCTTGCCCTTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDWPFSA*PCPWLE
Trigger: CTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCCA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVTVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWATVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAGTGCCTCCAGCTGCTaGAGAGCCGCATCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSASSC*RAASRS
Trigger: GGAGCGGGATGCGGCTCTCAAGCAGCTGGAGGCACT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCCCTCGCAGGCTCCTaGACTAACTCCCGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLALAGS*TNSREA
Trigger: AGCCTCCCGGGAGTTAGTCAAGGAGCCTGCGAGGGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGCCCTCGCAGGCTCCTaGACTAACTCCCGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTALAGS*TNSREA
Trigger: AGCCTCCCGGGAGTTAGTCAAGGAGCCTGCGAGGGC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTGCTGCTTCTGGCATaGCTGTTCCAGCTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALLLLA*LFQLAH
Trigger: GTGAGCAAGCTGGAACAGCAATGCCAGAAGCAGCAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAACTGCCGGCCAAGGTaGGCCCGCTCACCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQNCRPR*ARSPSP
Trigger: GGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGTT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAAACTGCCGGCCAAGGTaGGCCCGCTCACCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLNCRPR*ARSPSP
Trigger: GGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGTT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTTGGCACCCTCATACTaGGCAGTCATCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLAPSY*AVITSS
Trigger: GCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCAA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TGCTGCCGGGTGGTGATGCCAGTGCCCTCGGCTATCTGGATTGGCTaGATGCTGGCTCGGCGCAGGGTCTCTTGGGGGTCTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: CCRVVMPVPSAIWIG*MLARRRVSWGSPVF
Trigger: GAAAACTGGAGACCCCCAAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCACTGGCATCACCACCCGGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CGCTCCCTTAAGGAGGCCTCTCGCTCCTCTGCAGCAGTGGCCAGTTaGTGGGCATGGTCCTGCCTAGTTGCCTCCTGCTTCTCCGCTACC +
Preference number: 5 (lower is better)
Translates to: RSLKEASRSSAAVAS*WAWSCLVASCFSAT
Trigger: GGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCAGAGGAGCGAGAGGCCTCCTTAAGGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TTCTCTGAAGCCACCCGCTGTTTCTCAGCCTCCTCCCGGAGGCTCTaGACCTCCTCCCGCAGAGCAGAGCTGCGTTCTGCAGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: FSEATRCFSASSRRL*TSSRRAELRSAALA
Trigger: TGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGGAGGAGGTGCAGAGCCTCCGGGAGGAGGCTGAGAAACAGCGGGTGGCTTCAGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000620566.4
CDS GCA 90 bp TGGACATACTTCTCCCGGGCCTGGTCCAACTCCACTTCCAGAAACTaGCGGCCAAGGTTGGCCCGCTCACCCAGCCCCCGGTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: WTYFSRAWSNSTSRN*RPRLARSPSPRFSS
Trigger: AGAGGAGAACCGGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTATGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TGCTTCAGGCTACTGCTTAGCTGCTCCACCTGGTGGCGGAGGCCCTaGGAGGCCTGTTCTTGCTGTTGGAGGGTCTGTGCTAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: CFRLLLSCSTWWRRP*EACSCCWRVCASWA
Trigger: GGCCCAGCTAGCACAGACCCTCCAACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TCCCCCTCCGCCACCCAAACAAGAAGCCCAGGCAGATTCTGGCCCTaGAGTACAGGCCTGCGCTGTCCTGTGCTGCGTGCTATTGTCGGC +
Preference number: 5 (lower is better)
Translates to: SPSATQTRSPGRFWP*STGLRCPVLRAIVG
Trigger: GCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTGTACTCCAGGGCCAGAATCTGCCTGGGCTTCTTGTTTGGGTGGCGGAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCTTCAAGGCATTTCTaGTCCTGCAGGGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSSRHF*SCRAAL
Trigger: CAGCGCAGCCCTGCAGGACAAGAAATGCCTTGAAGA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGGACACCCCGGCCTGGGAACGACGAGCAGAACTGCGAGTGGTGGGGCGGTAGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: TGHPGLGTTSRTASGGAVVATWN*PRSRSC
Trigger: GCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAAC...TACCGCCCCACCACTCGCAGTTCTGCTCGTCGTTCCCAGGCCGGGGTGTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATCGGCGCAGGGTCTCTaGGGGGTCTCCAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSAQGL*GVSSFH
Trigger: ATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCGA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCTAGGGAGACCCGTTaGCGCTGCTGCCGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSRETR*RCCRVV
Trigger: CACCACCCGGCAGCAGCGCAAACGGGTCTCCCTAGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCTGTTCCCTAGCTTCTaGGGTGTGTTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVLFPSF*GVLRML
Trigger: CAGCATCCTCAACACACCCAAGAAGCTAGGGAACAG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCTGTTCCCTAGCTTCTaGGGTGTGTTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWALFPSF*GVLRML
Trigger: CAGCATCCTCAACACACCCAAGAAGCTAGGGAACAG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGGACAGGGCCTTCTTaGAGGCTCCCCGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGWTGPS*RLPAAE
Trigger: TTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGCTTTGCCTTGCCCTaGGCTCGAGGGGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGCFALP*ARGVAP
Trigger: TGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTGCTTTGCCTTGCCCTaGGCTCGAGGGGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTCFALP*ARGVAP
Trigger: TGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGCA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDTVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCATCTCTACCCTGGCTaGGAGCTGTGTGTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAHLYPG*ELCVVC
Trigger: GCAAACAACACACAGCTCCAAGCCAGGGTAGAGATG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCGCTCAGCAAGCAGCTaGGCTTCCTGCTGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKARSASS*ASCWPR
Trigger: GCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTGCTGGATGGTGGCATaGAGTGTGGTGAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDCWMVA*SVVSSE
Trigger: CTCTGAGCTCACCACACTCAATGCCACCATCCAGCA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGCAGCAGTGGCCAGTaGCTGGGCATGGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGCSSGQ*LGMVLP
Trigger: AGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGTGCCTCCAGCTGCTaGAGAGCCGCATCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAESASSC*RAASRS
Trigger: GGAGCGGGATGCGGCTCTCAAGCAGCTGGAGGCACT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTCTTCAAGGCTGCCCTaGGTGACCTTCAAGGACTCT +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWASSRLP*VTFKDS
Trigger: AGAGTCCTTGAAGGTCACCAAGGGCAGCCTTGAAGA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCCAGGCAGCTACTTCTTaGACGAGCTGCTCACACTCA +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAQAATS*TSCSHS
Trigger: TGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCTG...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAAGCGGGCCACCTCTTaGCTGGTGGCAGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGKRATS*LVAAIF
Trigger: AAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCTT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGAACTGGCGTCCCTGTaGCTCTTCCAGCCACTCGGG +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGELASL*LFQPLG
Trigger: CCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCCACACGCTGCTCGTaGAGGGCGTTCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKASTRCS*RAFCSR
Trigger: GCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATCCAGACCACGAAGCTaGGCCAACTCCTGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSRPRS*ANSWSL
Trigger: CAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGGA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCAGCTGTTCCTTCAGTaGCTTCACGGTTTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVQLFLQ*LHGLPK
Trigger: CTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCTG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAAGCCTTGCTGTGGTCTaGTACCTTGGTGCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGSLAVV*YLGAEG
Trigger: GCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCT...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAACTGCCGGCCAAGGTaGGCCCGCTCACCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGNCRPR*ARSPSP
Trigger: GGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGTT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTCATTGCCCATCTGCTCTGCCTCCCGCTCCATAGCCTGCAGCGCTaGCTGTGTGCTGCAGAACTGGCGTCCCTGTTGCTCTTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LIAHLLCLPLHSLQR*LCAAELASLLLFQP
Trigger: TGGCTGGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTATGGAGCGGGAGGCAGAGCAGATGGGCAATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TCTTGCAGGGTAGCGAACTCCACACGCTGCTCGTTGAGGGCGTTCTaGAGCCGCATCTCAAGCTCTGCTCTGGCCGCCTTCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SCRVANSTRCSLRAF*SRISSSALAAFSRA
Trigger: TGCCCTGGAGAAGGCGGCCAGAGCAGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGCTACCCTGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp GCCCAGGCAGATTCTGGCCCTGGAGTACAGGCCTGCGCTGTCCTGTaGTGCGTGCTATTGTCGGCTGTGGAATGGCCGCCAAAATCCCAG +
Preference number: 5 (lower is better)
Translates to: AQADSGPGVQACAVL*CVLLSAVEWPPKSQ
Trigger: CTGGGATTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTGTACTCCAGGGCCAGAATCTGCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS GCA 90 bp AGCAGAGCTGCGTTCTGCAGCTCTGGCACTGTTGCTGGCTGTCTCTaGCTGCAGCAGGCGCAGCCCTCCTCCAGCTTCTGGCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SRAAFCSSGTVAGCL*LQQAQPSSSFWLFS
Trigger: AGAGAAGAGCCAGAAGCTGGAGGAGGGCTGCGCCTGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616538.4
CDS CCA 90 bp TCCCTTAAGGAGGCCTCTCGCTCCTCTGCAGCAGTGGCCAGTTGCTaGGCATGGTCCTGCCTAGTTGCCTCCTGCTTCTCCGCTACCTCC +
Preference number: 5 (lower is better)
Translates to: SLKEASRSSAAVASC*AWSCLVASCFSATS
Trigger: GGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCAGAGGAGCGAGAGGCCTCCTTAAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCGTGGAGTGTCATCTaGGTGATGCCAGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAWSVI*VMPDSH
Trigger: GTGACTGTCTGGCATCACCAAGATGACACTCCACGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGGCTGCTTCAAGATTaGCTGTCCCTCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGRLLQD*LSLFSA
Trigger: GGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCGAACCTGAGAGAAAGTaGTTCCCACTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAEPERK*FPLEEE
Trigger: CTCCTCTTCCAGTGGGAACAACTTTCTCTCAGGTTC...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCCTCCGAAAGCTGGTaGATTTTGCGATCCATCTGG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSSESW*ILRSIW
Trigger: CCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACTGCTCCTGCAGCTCTaGGTTCTGCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPLLLQL*VLLLLG
Trigger: GCCAAGAAGCAGCAGAACCAAGAGCTGCAGGAGCAG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGTCTGTTCAGCCTCCTaGGTCTTCAGCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLVCSAS*VFSPAC
Trigger: GCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGAC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTTGGTCATGGTGATGTaGATGATCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDLVMVM*MICVVR
Trigger: GCGCACCACGCAGATCATCAACATCACCATGACCAA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACTCAGTAGTGCTCTGTTaGCGCCCTTCATGTCGGTCT +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSVVLC*RPSCRS
Trigger: AGACCGACATGAAGGGCGCAAACAGAGCACTACTGA...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGCTTCTTGGGTGTGTaGAGGATGCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDSFLGV*RMLKAI
Trigger: GATGGCCTTCAGCATCCTCAACACACCCAAGAAGCT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAAGAGTGGCTGCCTCTaGCTTCAAGGTTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDKSGCL*LQGFQL
Trigger: CAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCTT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGATGCTGGATGGTGGCATaGAGTGTGGTGAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGCWMVA*SVVSSE
Trigger: CTCTGAGCTCACCACACTCAATGCCACCATCCAGCA...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGCAGTTCTTGATCCTGTaGCTGGATGGTGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVQFLIL*LDGGIE
Trigger: CTCAATGCCACCATCCAGCAACAGGATCAAGAACTG...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCTGGGAGGCCTGTTCTaGCTGTTGGAGGGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGLGGLF*LLEGLC
Trigger: GCACAGACCCTCCAACAGCAAGAACAGGCCTCCCAG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGGCCTTTCTCAGTTGCTTTTaGCTGCTCAGACCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GGKVGRAPTLSMLQAPWAFLSCF*LLRPQL
Trigger: CAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAAA...GGCCCAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTGCTGCTCACCTGCCTaGCGCACCAAGGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLCCSPA*RTKVSK
Trigger: CTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGCA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGCCCTCGCAGGCTCCTaGACTAACTCCCGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQALAGS*TNSREA
Trigger: AGCCTCCCGGGAGTTAGTCAAGGAGCCTGCGAGGGC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGAACTGGCGTCCCTGTaGCTCTTCCAGCCACTCGGG +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGELASL*LFQPLG
Trigger: CCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCCACACGCTGCTCGTaGAGGGCGTTCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSTRCS*RAFCSR
Trigger: GCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACCAGCTGTTCCTTCAGTaGCTTCACGGTTTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDQLFLQ*LHGLPK
Trigger: CTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCTG...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TCTGGGCTGCCTCCAGACCACGAAGCTTGGCCAACTCCTGGTCCTTaGCTTCCTTTTCCGTCAGGGCATGAGCCAGTGCCTCTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: SGLPPDHEAWPTPGP*LPFPSGHEPVPLAG
Trigger: CCCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGGAGGCAGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp AGCTGCAGGGTGGAGAGGGCCTGCTCTTTCTGGAAGAACTTCTCCTaGCACGCCTTCAATTCTTGGCCCAGCTCCTCCGCACGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SCRVERACSFWKNFS*HAFNSWPSSSARSA
Trigger: GGCTGAGCGTGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCTGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TCGCTGCACCTCAGCCAGACGGGTCTCAGCATCAGCACGTACGGCTaGCAACTCTTGGACATACTTCTCCCGGGCCTGGTCCAACTCCAC +
Preference number: 5 (lower is better)
Translates to: SLHLSQTGLSISTYG*QLLDILLPGLVQLH
Trigger: GTGGAGTTGGACCAGGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGATGCTGAGACCCGTCTGGCTGAGGTGCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTCATACTTGGCAGTCATCACCTCCAGCTCCCGGGCAGTGCTCTGTaGTTCTCGCTGCACCTCAGCCAGACGGGTCTCAGCATCAGCACG +
Preference number: 5 (lower is better)
Translates to: LILGSHHLQLPGSAL*FSLHLSQTGLSIST
Trigger: CGTGCTGATGCTGAGACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGGAGGTGATGACTGCCAAGTATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TGGCACCCTCATACTTGGCAGTCATCACCTCCAGCTCCCGGGCAGTaGTCTGTGCTTCTCGCTGCACCTCAGCCAGACGGGTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: WHPHTWQSSPPAPGQ*SVLLAAPQPDGSQH
Trigger: ATGCTGAGACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CAGGCAGATTCTGGCCCTGGAGTACAGGCCTGCGCTGTCCTGTGCTaGGTGCTATTGTCGGCTGTGGAATGGCCGCCAAAATCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QADSGPGVQACAVLC*VLLSAVEWPPKSQL
Trigger: CAGCTGGGATTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTGTACTCCAGGGCCAGAATCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CCA 90 bp CATTCTTGTCACGCAGCTCCTCAAGCTCCTTGGGCTCCAGTGGGCTaGCCGCCTGCTTCTCATTCAGCAGGGCTAGGCGGTCAATGCGCT +
Preference number: 5 (lower is better)
Translates to: HSCHAAPQAPWAPVG*PPASHSAGLGGQCA
Trigger: AGCGCATTGACCGCCTAGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAGCTTGAGGAGCTGCGTGACAAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GCTCTGTTTGCGCCCTTCATGTCGGTCTCGGGGAGTCATGGGGCGTaGGAAACAGCTGGTGGCCTTCTTAGACTCAGGAGTTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: ALFAPFMSVSGSHGA*ETAGGLLRLRSSRA
Trigger: GGCCCTGGAACTCCTGAGTCTAAGAAGGCCACCAGCTGTTTCCCACGCCCCATGACTCCCCGAGACCGACATGAAGGGCGCAAACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TGCTGCTCCTTCTGCTTCAGGCTACTGCTTAGCTGCTCCACCTGGTaGCGGAGGCCCTGGGAGGCCTGTTCTTGCTGTTGGAGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: CCSFCFRLLLSCSTW*RRPWEACSCCWRVC
Trigger: ACAGACCCTCCAACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp AACTGCTGCTCCTTCTGCTTCAGGCTACTGCTTAGCTGCTCCACCTaGTGGCGGAGGCCCTGGGAGGCCTGTTCTTGCTGTTGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: NCCSFCFRLLLSCST*WRRPWEACSCCWRV
Trigger: GACCCTCCAACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp AAGGAGGCCTCTCGCTCCTCTGCAGCAGTGGCCAGTTGCTGGGCATaGTCCTGCCTAGTTGCCTCCTGCTTCTCCGCTACCTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: KEASRSSAAVASCWA*SCLVASCFSATSFN
Trigger: GTTGAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCAGAGGAGCGAGAGGCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CCTGGGCCTTCCACTCATCTTCAGCCTTGCTGTGGTCTTGTACCTTaGTGCGGAAGGCAGCCAACTCCCGTTGGGCCGAGGCTAAGGCAC +
Preference number: 5 (lower is better)
Translates to: PGPSTHLQPCCGLVP*CGRQPTPVGPRLRH
Trigger: GTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TCAGCACGTACGGCTGCCAACTCTTGGACATACTTCTCCCGGGCCTaGTCCAACTCCACTTCCAGAAACTGCCGGCCAAGGTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: SARTAANSWTYFSRA*SNSTSRNCRPRLAR
Trigger: GCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAGCGTGGAGTGTCATCTaGGTGATGCCAGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPAWSVI*VMPDSH
Trigger: GTGACTGTCTGGCATCACCAAGATGACACTCCACGC...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAAGCGAATCTCCCTCTaGGCCTGGTGGCTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAEKRISL*AWWLGG
Trigger: CCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAAGCGAATCTCCCTCTaGGCCTGGTGGCTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRKRISL*AWWLGG
Trigger: CCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACGAACCTGAGAGAAAGTaGTTCCCACTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDEPERK*FPLEEE
Trigger: CTCCTCTTCCAGTGGGAACAACTTTCTCTCAGGTTC...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTCCTCCGTCAGCTCATaGAGGGCATCCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTSSVSS*RASCSC
Trigger: GCAGCTACAGGATGCCCTCAATGAGCTGACGGAGGA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCTTCAAGGCATTTCTaGTCCTGCAGGGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSSRHF*SCRAAL
Trigger: CAGCGCAGCCCTGCAGGACAAGAAATGCCTTGAAGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTGGCTCAACTGGGCTaGCAGTTCATTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLAQLG*QFIQLG
Trigger: GCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTGCTCCTGCAGCTCTaGGTTCTGCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLLLQL*VLLLLG
Trigger: GCCAAGAAGCAGCAGAACCAAGAGCTGCAGGAGCAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCTGCTCCTGCAGCTCTaGGTTCTGCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLLLLQL*VLLLLG
Trigger: GCCAAGAAGCAGCAGAACCAAGAGCTGCAGGAGCAG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGTCTGTTCAGCCTCCTaGGTCTTCAGCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKAVCSAS*VFSPAC
Trigger: GCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGAC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGTCTGTTCAGCCTCCTaGGTCTTCAGCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRVCSAS*VFSPAC
Trigger: GCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGAC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTGGGTACGAGGCAGCTaGCTGGTGATACTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGWVRGS*LVILSG
Trigger: CCCACTCAGTATCACCAGCAAGCTGCCTCGTACCCA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGGACAGGGCCTTCTTaGAGGCTCCCCGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLWTGPS*RLPAAE
Trigger: TTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTGCTTTGCCTTGCCCTaGGCTCGAGGGGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: PTPLLRHRAHPSWERASSCFALP*ARGVAP
Trigger: TGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGCA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGCTTTGCCTTGCCCTaGGCTCGAGGGGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQCFALP*ARGVAP
Trigger: TGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGAGCTTGGAGCTGTGTGTaGTTTGCAGCAAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGAWSCV*FAARVA
Trigger: AGCCACTCTTGCTGCAAACAACACACAGCTCCAAGC...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACATCTCTACCCTGGCTaGGAGCTGTGTGTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGHLYPG*ELCVVC
Trigger: GCAAACAACACACAGCTCCAAGCCAGGGTAGAGATG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATGCTGGATGGTGGCATaGAGTGTGGTGAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPCWMVA*SVVSSE
Trigger: CTCTGAGCTCACCACACTCAATGCCACCATCCAGCA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTGGGAGGCCTGTTCTaGCTGTTGGAGGGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAELGGLF*LLEGLC
Trigger: GCACAGACCCTCCAACAGCAAGAACAGGCCTCCCAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAAGTGCCTCCAGCTGCTaGAGAGCCGCATCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSASSC*RAASRS
Trigger: GGAGCGGGATGCGGCTCTCAAGCAGCTGGAGGCACT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTGCTCACCTGCCTaGCGCACCAAGGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRCCSPA*RTKVSK
Trigger: CTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGCCAACTCCTGGTCCTaGCCTTCCTTTTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLANSWS*PSFSVR
Trigger: CCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGGC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCCAGACCACGAAGCTaGGCCAACTCCTGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSRPRS*ANSWSL
Trigger: CAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACAGCTGTTCCTTCAGTaGCTTCACGGTTTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: TVHAPGPLGQLREGASEGQLFLQ*LHGLPK
Trigger: CTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCTG...TCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCTGTGGTCTTGTACCTaGGTGCGGAAGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGLWSCT*VRKAAN
Trigger: GTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCAGCTCTGGCACTGTaGCTGGCTGTCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAALAL*LAVSAC
Trigger: GCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCTACGGCTGCCAACTCTaGGACATACTTCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTYGCQL*DILLPG
Trigger: GCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTA...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp AGCTTGGCCAACTCCTGGTCCTTGCCTTCCTTTTCCGTCAGGGCATaGGCCAGTGCCTCTTGCAGGGTAGCGAACTCCACACGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: SLANSWSLPSFSVRA*ASASCRVANSTRCS
Trigger: CGAGCAGCGTGTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGGCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp GCCGCCTGCTTCTCATTCAGCAGGGCTAGGCGGTCAATGCGCTGCTaGATCATGGCTATCTGTGCATCCTTCTCGGTGAGGAGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: AACFSFSRARRSMRC*IMAICASFSVRSLR
Trigger: CCGCAAGCTCCTCACCGAGAAGGATGCACAGATAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCCTGCTGAATGAGAAGCAGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp ACCTCCTTCAACTGCTGCTCCTTCTGCTTCAGGCTACTGCTTAGCTaGTCCACCTGGTGGCGGAGGCCCTGGGAGGCCTGTTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: TSFNCCSFCFRLLLS*STWWRRPWEACSCC
Trigger: ACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp GCAGCAGTGGCCAGTTGCTGGGCATGGTCCTGCCTAGTTGCCTCCTaGTTCTCCGCTACCTCCTTCAACTGCTGCTCCTTCTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AAVASCWAWSCLVAS*FSATSFNCCSFCFR
Trigger: CCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTCCTCTGCAGCAGTGGCCAGTTGCTGGGCATGGTCCTGCCTAGTTaGCTCCTGCTTCTCCGCTACCTCCTTCAACTGCTGCTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LLCSSGQLLGMVLPS*LLLLRYLLQLLLLL
Trigger: CAGAAGGAGCAGCAGTTGAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCAGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CAACTCCTGGTCCTTGCCTTCCTTTTCCGTCAGGGCATGAGCCAGTaGCTCTTGCAGGGTAGCGAACTCCACACGCTGCTCGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: QLLVLAFLFRQGMSQ*LLQGSELHTLLVEG
Trigger: GCCCTCAACGAGCAGCGTGTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp GGGCCTTCCACTCATCTTCAGCCTTGCTGTGGTCTTGTACCTTGGTaGGGAAGGCAGCCAACTCCCGTTGGGCCGAGGCTAAGGCACTCT +
Preference number: 5 (lower is better)
Translates to: GPSTHLQPCCGLVPW*GRQPTPVGPRLRHS
Trigger: AGAGTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TCCTCCTCCAAGCTGCTGATGAGGCTATTTTTCCTCTCAGCCTCTTaGCGGCCCCGGGCCACCTGGGCCTTCCACTCATCTTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: SSSKLLMRLFFLSAS*RPRATWAFHSSSAL
Trigger: CAAGGCTGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAAAAATAGCCTCATCAGCAGCTTGGAGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CAGATTCTGGCCCTGGAGTACAGGCCTGCGCTGTCCTGTGCTGCGTaGTATTGTCGGCTGTGGAATGGCCGCCAAAATCCCAGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: QILALEYRPALSCAA*YCRLWNGRQNPSCA
Trigger: AGCACAGCTGGGATTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTGTACTCCAGGGCCAGAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CCA 90 bp GCTGCTGCTTTTCTTCTTCGAAGTGGCCCCGCTCAGCAAGCAGCTTaGCTTCCTGCTGGCCTCGCTCAGTCTCCAGCATCTCTACCCTGG +
Preference number: 5 (lower is better)
Translates to: AAAFLLRSGPAQQAA*LPAGLAQSPASLPW
Trigger: CCAGGGTAGAGATGCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAAGCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp ACCAGCCGCTTCAACTCCTTGCTCTCCCCCTCCTTCTCCAGGACCTaGCGATTCAGGATGGACACCTCCTCCTCCAAGCTGCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: TSRFNSLLSPSFSRT*RFRMDTSSSKLLMR
Trigger: CCTCATCAGCAGCTTGGAGGAGGAGGTGTCCATCCTGAATCGCCAGGTCCTGGAGAAGGAGGGGGAGAGCAAGGAGTTGAAGCGGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GCCTGCTCTTTCTGGAAGAACTTCTCCTGCCACGCCTTCAATTCTTaGCCCAGCTCCTCCGCACGCTCAGCCTGTGAGGTCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ACSFWKNFSCHAFNS*PSSSARSACEVSSC
Trigger: GCAGGAGCTGACCTCACAGGCTGAGCGTGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GTGCTGGTGTGCTCGAGCTGCAGGGTGGAGAGGGCCTGCTCTTTCTaGAAGAACTTCTCCTGCCACGCCTTCAATTCTTGGCCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VLVCSSCRVERACSF*KNFSCHAFNSWPSS
Trigger: GGAGCTGGGCCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCTGCAGCTCGAGCACACCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GAGATAGGTGAGGCTGGTTCTCCAGGGACGCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTCAGAGGGTTGTTGGGGGACAAATCA +
Preference number: 5 (lower is better)
Translates to: EIGEAGSPGTLVPSG*VRGSLLRGLLGDKS
Trigger: TGATTTGTCCCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAACCAGCCTCACCTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS CCA 90 bp CAGGCCTGCGCTGTCCTGTGCTGCGTGCTATTGTCGGCTGTGGAATaGCCGCCAAAATCCCAGCTGTGCTGCCAGAACCTAATCCCCTGT +
Preference number: 5 (lower is better)
Translates to: QACAVLCCVLLSAVE*PPKSQLCCQNLIPC
Trigger: ACAGGGGATTAGGTTCTGGCAGCACAGCTGGGATTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGGCGTGGAGTGTCATCTaGGTGATGCCAGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGAWSVI*VMPDSH
Trigger: GTGACTGTCTGGCATCACCAAGATGACACTCCACGC...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCGGCTGCTTCAAGATTaGCTGTCCCTCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGRLLQD*LSLFSA
Trigger: GGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAGTCCCTGGGACTTTaGGAGCTCATGGTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTQSLGL*ELMVEW
Trigger: CCACTCTACCATGAGCTCCAAAAGTCCCAGGGACTG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAAAGCGAATCTCCCTCTaGGCCTGGTGGCTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLKRISL*AWWLGG
Trigger: CCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTT...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTTCTCGGTGAGGAGCTaGCGGTTCTCAGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRFSVRS*RFSASS
Trigger: GGAGCTAGCTGAGAACCGCAAGCTCCTCACCGAGAA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTTCTCGGTGAGGAGCTaGCGGTTCTCAGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGFSVRS*RFSASS
Trigger: GGAGCTAGCTGAGAACCGCAAGCTCCTCACCGAGAA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCCTCCGTCAGCTCATaGAGGGCATCCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSSVSS*RASCSC
Trigger: GCAGCTACAGGATGCCCTCAATGAGCTGACGGAGGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCCTCCGTCAGCTCATaGAGGGCATCCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSSVSS*RASCSC
Trigger: GCAGCTACAGGATGCCCTCAATGAGCTGACGGAGGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCTTCAAGGCATTTCTaGTCCTGCAGGGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSSRHF*SCRAAL
Trigger: CAGCGCAGCCCTGCAGGACAAGAAATGCCTTGAAGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCTGCACCTTGCTGGCTaGGTCAGAGTCAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGLHLAG*VRVSQF
Trigger: AAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTGGCTCAACTGGGCTaGCAGTTCATTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKALAQLG*QFIQLG
Trigger: GCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTGGCTCAACTGGGCTaGCAGTTCATTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLAQLG*QFIQLG
Trigger: GCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTGCTCCTGCAGCTCTaGGTTCTGCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKALLLQL*VLLLLG
Trigger: GCCAAGAAGCAGCAGAACCAAGAGCTGCAGGAGCAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCAGCTCGCAGCTCTTaGTTTTCCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSARSS*FSFCSC
Trigger: GCAGCTGCAGAAGGAAAACAAAGAGCTGCGAGCTGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRVATWN*PRSRSC
Trigger: GCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAAC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCTTTAAAGCATCAGTaGCCACCTGGAATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSLKHQ*PPGICP
Trigger: TGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCACACTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGTCCACATCTAGCTTCTaGGTCATGGTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: PTLSMLQAPWASSEKAPVSTSSF*VMVMLM
Trigger: CATCAACATCACCATGACCAAGAAGCTAGATGTGGA...CACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTCGGCGCAGGGTCTCTaGGGGGTCTCCAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSAQGL*GVSSFH
Trigger: ATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCGA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATCTAGGGAGACCCGTTaGCGCTGCTGCCGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSRETR*RCCRVV
Trigger: CACCACCCGGCAGCAGCGCAAACGGGTCTCCCTAGA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGACAGGGCCTTCTTaGAGGCTCCCCGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWTGPS*RLPAAE
Trigger: TTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGGCCCTTTAGTGCTTaGCCTTGCCCTTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRWPFSA*PCPWLE
Trigger: CTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCCA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACATCTCTACCCTGGCTaGGAGCTGTGTGTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPHLYPG*ELCVVC
Trigger: GCAAACAACACACAGCTCCAAGCCAGGGTAGAGATG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACGCTCAGCAAGCAGCTaGGCTTCCTGCTGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRRSASS*ASCWPR
Trigger: GCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCAGGCCAGCCAGTTCTaGATCCTGTTGCTGGATGGT +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGQASQF*ILLLDG
Trigger: ACCATCCAGCAACAGGATCAAGAACTGGCTGGCCTG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGCAGCAGTGGCCAGTaGCTGGGCATGGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGCSSGQ*LGMVLP
Trigger: AGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATGCTGCTCACCTGCCTaGCGCACCAAGGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLCCSPA*RTKVSK
Trigger: CTTGGAGACCTTGGTGCGCAAGGCAGGTGAGCAGCA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGATGAGCCAGTGCCTCTaGCAGGGTAGCGAACTCCAC +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAEMSQCL*QGSELH
Trigger: GTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCAT...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGCAGTTGCTTCACGGTTaGCCGAAGTTCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGQLLHG*PKFLQL
Trigger: GAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACTG...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTGCTGCTTCTGGCATaGCTGTTCCAGCTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLLLLA*LFQLAH
Trigger: GTGAGCAAGCTGGAACAGCAATGCCAGAAGCAGCAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTGTGGTCTTGTACCTaGGTGCGGAAGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLWSCT*VRKAAN
Trigger: GTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGAGCCTTGCTGTGGTCTaGTACCTTGGTGCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSLAVV*YLGAEG
Trigger: GCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCT...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCGCAGCTCTGGCACTGTaGCTGGCTGTCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGAALAL*LAVSAC
Trigger: GCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGC...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCCCCCAGCGGCCTGCTaGCTCTGCTCCAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKPPAAC*LCSSSS
Trigger: TGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTACGGCTGCCAACTCTaGGACATACTTCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKAYGCQL*DILLPG
Trigger: GCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCCAGGACCTTGACCTaGGCACCCTCATACTTGGCA +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSRTLT*APSYLA
Trigger: TGCCAAGTATGAGGGTGCCAAGGTCAAGGTCCTGGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTCTCCTCCAGGACCTaGACCTTGGCACCCTCATAC +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLSSRT*TLAPSY
Trigger: GTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp GCCAGACAGTCACTCCAATGCGCCCACGGCCTCACGCAGAAATGGTaGAGCCCTCTCCTGAGCTGTCTCTACAGCTCAACGTGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: ARQSLQCAHGLTQKW*SPLLSCLYSSTCRQ
Trigger: TTGCCTGCACGTTGAGCTGTAGAGACAGCTCAGGAGAGGGCTTCACCATTTCTGCGTGAGGCCGTGGGCGCATTGGAGTGACTGTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535947.5
CDS GCA 90 bp CTGGCCGCCTGCTTCTCATTCAGCAGGGCTAGGCGGTCAATGCGCTaGTGCATCATGGCTATCTGTGCATCCTTCTCGGTGAGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LAACFSFSRARRSMR*CIMAICASFSVRSL
Trigger: CAAGCTCCTCACCGAGAAGGATGCACAGATAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCCTGCTGAATGAGAAGCAGGCGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TTTTCTTCTTCGAAGTGGCCCCGCTCAGCAAGCAGCTTGGCTTCCTaGTGGCCTCGCTCAGTCTCCAGCATCTCTACCCTGGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: FSSSKWPRSASSLAS*WPRSVSSISTLAWS
Trigger: GCTCCAAGCCAGGGTAGAGATGCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp ACCAGGCTTCGGGTCTCTGCCTTCAGCTCAGAGATACAACGCTGCTaGTCTTCCAGGGCATCTGCAGCCCTGCGCTTCTCCTCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: TRLRVSAFSSEIQRC*SSRASAALRFSSSR
Trigger: CCTTGAAGAGGAGAAGCGCAGGGCTGCAGATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGAGCTGAAGGCAGAGACCCGAAGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp AGGGCCTGTGTGCTGGTGTGCTCGAGCTGCAGGGTGGAGAGGGCCTaGTCTTTCTGGAAGAACTTCTCCTGCCACGCCTTCAATTCTTGG +
Preference number: 5 (lower is better)
Translates to: RACVLVCSSCRVERA*SFWKNFSCHAFNSW
Trigger: CCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCTGCAGCTCGAGCACACCAGCACACAGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TCGGCTATCTGGATTGGCTGCATGCTGGCTCGGCGCAGGGTCTCTTaGGGGTCTCCAGTTTTCATCTCCTCATCTGTGATGGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SAIWIGCMLARRRVS*GSPVFISSSVMVPR
Trigger: CCTGGGCACCATCACAGATGAGGAGATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TCTTCAAGGCTGCCCTTGGTGACCTTCAAGGACTCTTTGAGGGCCTaGAGCTGCTCCTGGAGCTGGTCCTTCTCCTGGGCCACCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SSRLPLVTFKDSLRA*SCSWSWSFSWATLS
Trigger: AGAAAGGGTGGCCCAGGAGAAGGACCAGCTCCAGGAGCAGCTCCAGGCCCTCAAAGAGTCCTTGAAGGTCACCAAGGGCAGCCTTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CTGCCTTGCGCACCAAGGTCTCCAAGCGGGCCACCTCTTTGCTGGTaGCAGCCATCTTTTCCTGCAGAGTGGAGAGGTCATCTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LPCAPRSPSGPPLCW*QPSFPAEWRGHLQA
Trigger: AGCTTGCAGATGACCTCTCCACTCTGCAGGAAAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCTTGGAGACCTTGGTGCGCAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CACCTGCCTTGCGCACCAAGGTCTCCAAGCGGGCCACCTCTTTGCTaGTGGCAGCCATCTTTTCCTGCAGAGTGGAGAGGTCATCTGCAA +
Preference number: 5 (lower is better)
Translates to: HLPCAPRSPSGPPLC*WQPSFPAEWRGHLQ
Trigger: TTGCAGATGACCTCTCCACTCTGCAGGAAAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCTTGGAGACCTTGGTGCGCAAGGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCGTGGAGTGTCATCTaGGTGATGCCAGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAEAWSVI*VMPDSH
Trigger: GTGACTGTCTGGCATCACCAAGATGACACTCCACGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCGGCTGCTTCAAGATTaGCTGTCCCTCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAERLLQD*LSLFSA
Trigger: GGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCAAGCGAATCTCCCTCTaGGCCTGGTGGCTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGKRISL*AWWLGG
Trigger: CCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTTCTCGGTGAGGAGCTaGCGGTTCTCAGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQFSVRS*RFSASS
Trigger: GGAGCTAGCTGAGAACCGCAAGCTCCTCACCGAGAA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCCTCCGAAAGCTGGTaGATTTTGCGATCCATCTGG +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSSESW*ILRSIW
Trigger: CCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCCTCCGTCAGCTCATaGAGGGCATCCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSSVSS*RASCSC
Trigger: GCAGCTACAGGATGCCCTCAATGAGCTGACGGAGGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCTGCACCTTGCTGGCTaGGTCAGAGTCAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAELHLAG*VRVSQF
Trigger: AAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCTGCACCTTGCTGGCTaGGTCAGAGTCAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLHLAG*VRVSQF
Trigger: AAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCTGCACCTTGCTGGCTaGGTCAGAGTCAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKALHLAG*VRVSQF
Trigger: AAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTGGCTCAACTGGGCTaGCAGTTCATTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLAQLG*QFIQLG
Trigger: GCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCAGCTCGCAGCTCTTaGTTTTCCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSARSS*FSFCSC
Trigger: GCAGCTGCAGAAGGAAAACAAAGAGCTGCGAGCTGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLVATWN*PRSRSC
Trigger: GCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAAC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQVATWN*PRSRSC
Trigger: GCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAAC...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTTGGTCATGGTGATGTaGATGATCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGLVMVM*MICVVR
Trigger: GCGCACCACGCAGATCATCAACATCACCATGACCAA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCAGTAGTGCTCTGTTaGCGCCCTTCATGTCGGTCT +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSVVLC*RPSCRS
Trigger: AGACCGACATGAAGGGCGCAAACAGAGCACTACTGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGCTGTTCCCTAGCTTCTaGGGTGTGTTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLLFPSF*GVLRML
Trigger: CAGCATCCTCAACACACCCAAGAAGCTAGGGAACAG...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCTGTTCCCTAGCTTCTaGGGTGTGTTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTLFPSF*GVLRML
Trigger: CAGCATCCTCAACACACCCAAGAAGCTAGGGAACAG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGGACAGGGCCTTCTTaGAGGCTCCCCGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRWTGPS*RLPAAE
Trigger: TTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTGGCCCTTTAGTGCTTaGCCTTGCCCTTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQWPFSA*PCPWLE
Trigger: CTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCCA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGAAGAGTGGCTGCCTCTaGCTTCAAGGTTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLKSGCL*LQGFQL
Trigger: CAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCTT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGCTTGGAGCTGTGTGTaGTTTGCAGCAAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTAWSCV*FAARVA
Trigger: AGCCACTCTTGCTGCAAACAACACACAGCTCCAAGC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCATCTCTACCCTGGCTaGGAGCTGTGTGTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTHLYPG*ELCVVC
Trigger: GCAAACAACACACAGCTCCAAGCCAGGGTAGAGATG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTCAGGCCAGCCAGTTCTaGATCCTGTTGCTGGATGGT +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKAQASQF*ILLLDG
Trigger: ACCATCCAGCAACAGGATCAAGAACTGGCTGGCCTG...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGCAGCAGTGGCCAGTaGCTGGGCATGGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRCSSGQ*LGMVLP
Trigger: AGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGTGCCTCCAGCTGCTaGAGAGCCGCATCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSASSC*RAASRS
Trigger: GGAGCGGGATGCGGCTCTCAAGCAGCTGGAGGCACT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTGCAGAATCTCCAGCTaGGCAGCCTTCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAECRISS*AAFSFS
Trigger: GGAGAAGGAGAAGGCTGCCAAGCTGGAGATTCTGCA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCAATTAGCCACCTGAAGTaGCTGCTGCAGAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPISHLK*LLQNLQ
Trigger: CTGGAGATTCTGCAGCAGCAACTTCAGGTGGCTAAT...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGTCTTCAAGGCTGCCCTaGGTGACCTTCAAGGACTCT +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGSSRLP*VTFKDS
Trigger: AGAGTCCTTGAAGGTCACCAAGGGCAGCCTTGAAGA...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCATACTGTGCCTCCTCTaGCTGGCTATCCTCATACCG +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTILCLL*LAILIP
Trigger: CGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTAT...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAAGCGGGCCACCTCTTaGCTGGTGGCAGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQKRATS*LVAAIF
Trigger: AAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCTT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCAGTTGCTTCACGGTTaGCCGAAGTTCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAEQLLHG*PKFLQL
Trigger: GAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACTG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCAGTTGCTTCACGGTTaGCCGAAGTTCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRQLLHG*PKFLQL
Trigger: GAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACTG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAGCCTTGCTGTGGTCTaGTACCTTGGTGCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSLAVV*YLGAEG
Trigger: GCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACACTCATCTTCAGCCTaGCTGTGGTCTTGTACCTTG +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPHSSSA*LWSCTL
Trigger: CAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTG...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGCAGCTCTGGCACTGTaGCTGGCTGTCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRAALAL*LAVSAC
Trigger: GCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGCAGCTCTGGCACTGTaGCTGGCTGTCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPAALAL*LAVSAC
Trigger: GCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTACGGCTGCCAACTCTaGGACATACTTCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: PTPLLRHRAHPSWERASSYGCQL*DILLPG
Trigger: GCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTCAGGCCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGTACGGCTGCCAACTCTaGGACATACTTCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: LRPPSHERGHNPMSSCLAYGCQL*DILLPG
Trigger: GCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTA...CGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTTGGCACCCTCATACTaGGCAGTCATCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKALAPSY*AVITSS
Trigger: GCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCAA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTTGGCACCCTCATACTaGGCAGTCATCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRLAPSY*AVITSS
Trigger: GCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCAA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTCTCCTCCAGGACCTaGACCTTGGCACCCTCATAC +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLSSRT*TLAPSY
Trigger: GTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp GGTAAACTGGACTCAGCTTTGCACATGTGGTCAAGACTGTGGCTGTaGCCCCAGCAGAGGGTTACCTTGTCCTGCAGGGCTGCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GKLDSALHMWSRLWL*PQQRVTLSCRAALS
Trigger: GCTCAGCGCAGCCCTGCAGGACAAGGTAACCCTCTGCTGGGGTCACAGCCACAGTCTTGACCACATGTGCAAAGCTGAGTCCAGTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000536119.5
ENST00000540843.5
CDS GCA 90 bp CCTGGGGCTCACGGCTCTTTAAAGCATCAGTTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCTGGTCTGCATGGGCAACCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: PGAHGSLKHQLPPGI*PGLEAAGLHGQPVP
Trigger: AGGCACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGAGCCGTGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TCCTGCCTAGTTGCCTCCTGCTTCTCCGCTACCTCCTTCAACTGCTaGTCCTTCTGCTTCAGGCTACTGCTTAGCTGCTCCACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SCLVASCFSATSFNC*SFCFRLLLSCSTWW
Trigger: CCACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TGGTCCTGCCTAGTTGCCTCCTGCTTCTCCGCTACCTCCTTCAACTaGTGCTCCTTCTGCTTCAGGCTACTGCTTAGCTGCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: WSCLVASCFSATSFN*CSFCFRLLLSCSTW
Trigger: CCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TGCCTTCAGCTCAGAGATACAACGCTGCTGCTCTTCCAGGGCATCTaGAGCCCTGCGCTTCTCCTCTTCAAGGCTGCCCTTGGTGACCTT +
Preference number: 5 (lower is better)
Translates to: CLQLRDTTLLLFQGI*SPALLLFKAALGDL
Trigger: AAGGTCACCAAGGGCAGCCTTGAAGAGGAGAAGCGCAGGGCTGCAGATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGAGCTGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTCCTTTCGTTCCCGCTTATGCTGCTCCACCAGGCTTCGGGTCTCTaGCTTCAGCTCAGAGATACAACGCTGCTGCTCTTCCAGGGCATC +
Preference number: 5 (lower is better)
Translates to: LLSFPLMLLHQASGL*LQLRDTTLLLFQGI
Trigger: GATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGAGCTGAAGGCAGAGACCCGAAGCCTGGTGGAGCAGCATAAGCGGGAACGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GGCTTAGCCTGGGGCTCACGGCTCTTTAAAGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGAAGCTGCTGGTCTGCATGGGCAACC +
Preference number: 5 (lower is better)
Translates to: GLAWGSRLFKASVAT*NLPRSRSCWSAWAT
Trigger: GGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGAGCCGTGAGCCCCAGGCTAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CCCTCCTCGCAGCTCAGATCCAGGCTGTCAATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCACGGCTCTTTAAAGCATCAGTTGCC +
Preference number: 5 (lower is better)
Translates to: PSSQLRSRLSILKSS*GLAWGSRLFKASVA
Trigger: GGCAACTGATGCTTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTATTGACAGCCTGGATCTGAGCTGCGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TGGCGCCGGTCAGCCTGTTTAGTAGAAGCTGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGTTTGCGCCCTTCATGTCGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: WRRSACLVEAGAAFF*ASVVLCLRPSCRSR
Trigger: CCGAGACCGACATGAAGGGCGCAAACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAGGCTGACCGGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GCTTGGCTTCCTGCTGGCCTCGCTCAGTCTCCAGCATCTCTACCCTaGCTTGGAGCTGTGTGTTGTTTGCAGCAAGAGTGGCTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: AWLPAGLAQSPASLP*LGAVCCLQQEWLPL
Trigger: AAGAGGCAGCCACTCTTGCTGCAAACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp AGGTCAGTGATCAGGCTAGACAGCTGCTGCTTTTCTTCTTCGAAGTaGCCCCGCTCAGCAAGCAGCTTGGCTTCCTGCTGGCCTCGCTCA +
Preference number: 5 (lower is better)
Translates to: RSVIRLDSCCFSSSK*PRSASSLASCWPRS
Trigger: TGAGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGATCACTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp ACTTCCTTCTCTTGGACCTGCTGGAGTGCTCTGGCCAGGTTGGCATaGAGCTCAGCTAGTTCGTTCTGCTGCCGGCTTATCTGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: TSFSWTCWSALARLA*SSASSFCCRLIWSS
Trigger: CGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGAGCTCCATGCCAACCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAAGGAAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GCAGCCATCTTTTCCTGCAGAGTGGAGAGGTCATCTGCAAGCTTCTaGGCCCTGACTTCCTTCTCTTGGACCTGCTGGAGTGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: AAIFSCRVERSSASF*ALTSFSWTCWSALA
Trigger: GGCCAGAGCACTCCAGCAGGTCCAAGAGAAGGAAGTCAGGGCCCAGAAGCTTGCAGATGACCTCTCCACTCTGCAGGAAAAGATGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp ATGAGGCTATTTTTCCTCTCAGCCTCTTGCCGGCCCCGGGCCACCTaGGCCTTCCACTCATCTTCAGCCTTGCTGTGGTCTTGTACCTTG +
Preference number: 5 (lower is better)
Translates to: MRLFFLSASCRPRAT*AFHSSSALLWSCTL
Trigger: CAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAAAAATAGCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TCAGCCAGACGGGTCTCAGCATCAGCACGTACGGCTGCCAACTCTTaGACATACTTCTCCCGGGCCTGGTCCAACTCCACTTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: SARRVSASARTAANS*TYFSRAWSNSTSRN
Trigger: GTTTCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGATGCTGAGACCCGTCTGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GTGGGCAGTGGCTGCCACAGCCTGAAGAACTCTTCCAACTCTTTCTaGGGGTCTTCTGGAGATGGGACTGCAATGGCTCCTCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VGSGCHSLKNSSNSF*GSSGDGTAMAPQLQ
Trigger: CTGCAGCTGAGGAGCCATTGCAGTCCCATCTCCAGAAGACCCCCAGAAAGAGTTGGAAGAGTTCTTCAGGCTGTGGCAGCCACTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535111.5
ENST00000543450.1
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGCGTGGAGTGTCATCTaGGTGATGCCAGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLAWSVI*VMPDSH
Trigger: GTGACTGTCTGGCATCACCAAGATGACACTCCACGC...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTGTCCATGCTCCAGGCCCCCTGGGCCAGCTCCGAGAAGGCGCCAGTGAAGGACATTCTGTCAATGATCTaGATGAAGATGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: LSMLQAPWASSEKAPVKDILSMI*MKMLQS
Trigger: GGACTGCAGCATCTTCATCAAGATCATTGACAGAAT...GTCCTTCACTGGCGCCTTCTCGGAGCTGGCCCAGGGGGCCTGGAGCATGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCGGCTGCTTCAAGATTaGCTGTCCCTCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQRLLQD*LSLFSA
Trigger: GGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTCAGTCCCTGGGACTTTaGGAGCTCATGGTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: PTPLLRHRAHPSWERASSQSLGL*ELMVEW
Trigger: CCACTCTACCATGAGCTCCAAAAGTCCCAGGGACTG...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGAACCTGAGAGAAAGTaGTTCCCACTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTEPERK*FPLEEE
Trigger: CTCCTCTTCCAGTGGGAACAACTTTCTCTCAGGTTC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCTGCACCTTGCTGGCTaGGTCAGAGTCAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQLHLAG*VRVSQF
Trigger: AAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACTGCACCTTGCTGGCTaGGTCAGAGTCAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLHLAG*VRVSQF
Trigger: AAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCTGCTCCTGCAGCTCTaGGTTCTGCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLLLQL*VLLLLG
Trigger: GCCAAGAAGCAGCAGAACCAAGAGCTGCAGGAGCAG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCAGCTCGCAGCTCTTaGTTTTCCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSARSS*FSFCSC
Trigger: GCAGCTGCAGAAGGAAAACAAAGAGCTGCGAGCTGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCAGCTCGCAGCTCTTaGTTTTCCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKASARSS*FSFCSC
Trigger: GCAGCTGCAGAAGGAAAACAAAGAGCTGCGAGCTGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGTCTGTTCAGCCTCCTaGGTCTTCAGCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPVCSAS*VFSPAC
Trigger: GCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGAC...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCTTGGTCATGGTGATGTaGATGATCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLVMVM*MICVVR
Trigger: GCGCACCACGCAGATCATCAACATCACCATGACCAA...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCGGCGCAGGGTCTCTaGGGGGTCTCCAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSAQGL*GVSSFH
Trigger: ATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCGGCGCAGGGTCTCTaGGGGGTCTCCAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSAQGL*GVSSFH
Trigger: ATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCAGTAGTGCTCTGTTaGCGCCCTTCATGTCGGTCT +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSVVLC*RPSCRS
Trigger: AGACCGACATGAAGGGCGCAAACAGAGCACTACTGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCAGTAGTGCTCTGTTaGCGCCCTTCATGTCGGTCT +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAESVVLC*RPSCRS
Trigger: AGACCGACATGAAGGGCGCAAACAGAGCACTACTGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGCTTCTTGGGTGTGTaGAGGATGCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGSFLGV*RMLKAI
Trigger: GATGGCCTTCAGCATCCTCAACACACCCAAGAAGCT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTAGCTTCTTGGGTGTGTaGAGGATGCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKASFLGV*RMLKAI
Trigger: GATGGCCTTCAGCATCCTCAACACACCCAAGAAGCT...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCTGTTCCCTAGCTTCTaGGGTGTGTTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGLFPSF*GVLRML
Trigger: CAGCATCCTCAACACACCCAAGAAGCTAGGGAACAG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTGCTTTGCCTTGCCCTaGGCTCGAGGGGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKCFALP*ARGVAP
Trigger: TGGTGCCACCCCTCGAGCCAAGGGCAAGGCAAAGCA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTGGCCCTTTAGTGCTTaGCCTTGCCCTTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGWPFSA*PCPWLE
Trigger: CTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCCA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGGCTTGGAGCTGTGTGTaGTTTGCAGCAAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAEAWSCV*FAARVA
Trigger: AGCCACTCTTGCTGCAAACAACACACAGCTCCAAGC...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGCTTGGAGCTGTGTGTaGTTTGCAGCAAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGAWSCV*FAARVA
Trigger: AGCCACTCTTGCTGCAAACAACACACAGCTCCAAGC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTGGGAGGCCTGTTCTaGCTGTTGGAGGGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLGGLF*LLEGLC
Trigger: GCACAGACCCTCCAACAGCAAGAACAGGCCTCCCAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGATTAGCCACCTGAAGTaGCTGCTGCAGAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGISHLK*LLQNLQ
Trigger: CTGGAGATTCTGCAGCAGCAACTTCAGGTGGCTAAT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCTTCAAGGCTGCCCTaGGTGACCTTCAAGGACTCT +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKASSRLP*VTFKDS
Trigger: AGAGTCCTTGAAGGTCACCAAGGGCAGCCTTGAAGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCATACTGTGCCTCCTCTaGCTGGCTATCCTCATACCG +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGILCLL*LAILIP
Trigger: CGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTAT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGAACTGGCGTCCCTGTaGCTCTTCCAGCCACTCGGG +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKELASL*LFQPLG
Trigger: CCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGCCAACTCCTGGTCCTaGCCTTCCTTTTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRANSWS*PSFSVR
Trigger: CCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGGC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCTGCTGCTTCTGGCATaGCTGTTCCAGCTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQLLLLA*LFQLAH
Trigger: GTGAGCAAGCTGGAACAGCAATGCCAGAAGCAGCAG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCTGTGGTCTTGTACCTaGGTGCGGAAGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLWSCT*VRKAAN
Trigger: GTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCACTCATCTTCAGCCTaGCTGTGGTCTTGTACCTTG +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTHSSSA*LWSCTL
Trigger: CAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTG...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp TGTGTCACTGAGGTCTGGGCACTGTCCCGGGCTTCATTAGCCACCTaGAGTTGCTGCTGCAGAATCTCCAGCTTGGCAGCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CVTEVWALSRASLAT*SCCCRISSLAAFSF
Trigger: GAAGGAGAAGGCTGCCAAGCTGGAGATTCTGCAGCAGCAACTTCAGGTGGCTAATGAAGCCCGGGACAGTGCCCAGACCTCAGTGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp TCTTTTCCTGCAGAGTGGAGAGGTCATCTGCAAGCTTCTGGGCCCTaGCTTCCTTCTCTTGGACCTGCTGGAGTGCTCTGGCCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: SFPAEWRGHLQASGP*LPSLGPAGVLWPGW
Trigger: CCAACCTGGCCAGAGCACTCCAGCAGGTCCAAGAGAAGGAAGTCAGGGCCCAGAAGCTTGCAGATGACCTCTCCACTCTGCAGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp CCGTCTGGCTGGGTACGAGGCAGCTTGCTAGACTCATCATGGCACTaGCAGAGGAAGATGAGTGGTGACAAGCCAAGAACTCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PSGWVRGSLLDSSWH*QRKMSGDKPRTQAR
Trigger: CCTGGCCTGAGTTCTTGGCTTGTCACCACTCATCTTCCTCTGTCAGTGCCATGATGAGTCTAGCAAGCTGCCTCGTACCCAGCCAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541262.5
CDS TCA 90 bp TCCAATGCGCCCACGGCCTCACGCAGAAATGGTGAAGCCCTCTCCTaGGCTGTCTCTACAGCTCAACGTGCAGGCAAACACGCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SNAPTASRRNGEALS*AVSTAQRAGKHAFL
Trigger: AAGGAAAGCGTGTTTGCCTGCACGTTGAGCTGTAGAGACAGCTCAGGAGAGGGCTTCACCATTTCTGCGTGAGGCCGTGGGCGCATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535947.5
CDS GCA 90 bp TGGTCCTTCTCCTGGGCCACCCTTTCTTTCTCAGTTGCTTTTTGCTaGTCAGACCGCAGCTGCAACTCTAGCTCTGCAACCTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: WSFSWATLSFSVAFC*SDRSCNSSSATWAW
Trigger: CCAGGCCCAGGTTGCAGAGCTAGAGTTGCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAAAGAAAGGGTGGCCCAGGAGAAGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp AGGTTGGCATGGAGCTCAGCTAGTTCGTTCTGCTGCCGGCTTATCTaGAGCTCGCTGTGGGATTCTATGCCTGCCACCTTCTCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: RLAWSSASSFCCRLI*SSLWDSMPATFSFA
Trigger: GGCAAAGGAGAAGGTGGCAGGCATAGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGAGCTCCATGCCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GTTCCTCCAGCTCTTTTATCTGGGCTGCCTCCAGACCACGAAGCTTaGCCAACTCCTGGTCCTTGCCTTCCTTTTCCGTCAGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: VPPALLSGLPPDHEA*PTPGPCLPFPSGHE
Trigger: CTCATGCCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGGAGGCAGCCCAGATAAAAGAGCTGGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCGGCTGCTTCAAGATTaGCTGTCCCTCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGRLLQD*LSLFSA
Trigger: GGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCGAACCTGAGAGAAAGTaGTTCCCACTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGEPERK*FPLEEE
Trigger: CTCCTCTTCCAGTGGGAACAACTTTCTCTCAGGTTC...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTGAACCTGAGAGAAAGTaGTTCCCACTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKAEPERK*FPLEEE
Trigger: CTCCTCTTCCAGTGGGAACAACTTTCTCTCAGGTTC...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGGAAAGCTGGTTGATTTaGCGATCCATCTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLESWLI*RSIWLF
Trigger: GAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTC...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCGAAAGCTGGTTGATTTaGCGATCCATCTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSVLGKSILWQVLPPGQTESWLI*RSIWLF
Trigger: GAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTC...GGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATCCTCCGTCAGCTCATaGAGGGCATCCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSSVSS*RASCSC
Trigger: GCAGCTACAGGATGCCCTCAATGAGCTGACGGAGGA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCTTCAAGGCATTTCTaGTCCTGCAGGGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSSRHF*SCRAAL
Trigger: CAGCGCAGCCCTGCAGGACAAGAAATGCCTTGAAGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCTTCAAGGCATTTCTaGTCCTGCAGGGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSSRHF*SCRAAL
Trigger: CAGCGCAGCCCTGCAGGACAAGAAATGCCTTGAAGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACTGGCTCAACTGGGCTaGCAGTTCATTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRLAQLG*QFIQLG
Trigger: GCCCAGCTGAATGAACTGCAAGCCCAGTTGAGCCAG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTGCTCCTGCAGCTCTaGGTTCTGCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLLLQL*VLLLLG
Trigger: GCCAAGAAGCAGCAGAACCAAGAGCTGCAGGAGCAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCAGCTCGCAGCTCTTaGTTTTCCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSARSS*FSFCSC
Trigger: GCAGCTGCAGAAGGAAAACAAAGAGCTGCGAGCTGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGGTCTGTTCAGCCTCCTaGGTCTTCAGCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKVCSAS*VFSPAC
Trigger: GCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGAC...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCATCTTTAAAGCATCAGTaGCCACCTGGAATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: RSDPVLDFKSEGPCWAQPSLKHQ*PPGICP
Trigger: TGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGA...TGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGGGTACGAGGCAGCTaGCTGGTGATACTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPWVRGS*LVILSG
Trigger: CCCACTCAGTATCACCAGCAAGCTGCCTCGTACCCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATTGGTCATGGTGATGTaGATGATCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLLVMVM*MICVVR
Trigger: GCGCACCACGCAGATCATCAACATCACCATGACCAA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTTGGTCATGGTGATGTaGATGATCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PTPLLRHRAHPSWERASSLVMVM*MICVVR
Trigger: GCGCACCACGCAGATCATCAACATCACCATGACCAA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRTVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGAAGAGTGGCTGCCTCTaGCTTCAAGGTTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQKSGCL*LQGFQL
Trigger: CAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCTT...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGCAGTTCTTGATCCTGTaGCTGGATGGTGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRQFLIL*LDGGIE
Trigger: CTCAATGCCACCATCCAGCAACAGGATCAAGAACTG...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATGCAGAATCTCCAGCTaGGCAGCCTTCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRCRISS*AAFSFS
Trigger: GGAGAAGGAGAAGGCTGCCAAGCTGGAGATTCTGCA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTTTCTCAGTTGCTTTTaGCTGCTCAGACCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAEFLSCF*LLRPQL
Trigger: CAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAAA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTATACTGTGCCTCCTCTaGCTGGCTATCCTCATACCG +
Preference number: 5 (lower is better)
Translates to: PTPLLRHRAHPSWERASSILCLL*LAILIP
Trigger: CGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTAT...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCAGACCACGAAGCTaGGCCAACTCCTGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSRPRS*ANSWSL
Trigger: CAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCAGCTGTTCCTTCAGTaGCTTCACGGTTTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQQLFLQ*LHGLPK
Trigger: CTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCTG...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCTGCTGCTTCTGGCATaGCTGTTCCAGCTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLLLLA*LFQLAH
Trigger: GTGAGCAAGCTGGAACAGCAATGCCAGAAGCAGCAG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACTGTGGTCTTGTACCTaGGTGCGGAAGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRLWSCT*VRKAAN
Trigger: GTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGCCTTGCTGTGGTCTaGTACCTTGGTGCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSLAVV*YLGAEG
Trigger: GCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGCACTCATCTTCAGCCTaGCTGTGGTCTTGTACCTTG +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAEHSSSA*LWSCTL
Trigger: CAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTG...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCCACTCATCTTCAGCCTaGCTGTGGTCTTGTACCTTG +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGHSSSA*LWSCTL
Trigger: CAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTG...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATACGGCTGCCAACTCTaGGACATACTTCTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPYGCQL*DILLPG
Trigger: GCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTCTCCTCCAGGACCTaGACCTTGGCACCCTCATAC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLSSRT*TLAPSY
Trigger: GTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 90 bp CTCCAATGCGCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LQCASWWKPPHTRTG*SPAVWLRISFHLAA
Trigger: CGCAGCCAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGCGCATTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393695.8
ENST00000537905.5
ENST00000540843.5
ENST00000613205.4
CDS TCA 90 bp CAGCTTGCTAGACTCATCATGGCACTGACAGAGGAAGATGAGTGGTaGCAAGCCAAGAACTCAGGCCAGGCTGCCCAGGGTCAAACCCCA +
Preference number: 5 (lower is better)
Translates to: QLARLIMALTEEDEW*QAKNSGQAAQGQTP
Trigger: TGGGGTTTGACCCTGGGCAGCCTGGCCTGAGTTCTTGGCTTGTCACCACTCATCTTCCTCTGTCAGTGCCATGATGAGTCTAGCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541262.5
CDS GCA 90 bp TTGGAGATGGAGCTCTGCAGGTCAGTGATCAGGCTAGACAGCTGCTaGTTTTCTTCTTCGAAGTGGCCCCGCTCAGCAAGCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LEMELCRSVIRLDSC*FSSSKWPRSASSLA
Trigger: AGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGATCACTGACCTGCAGAGCTCCATCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TGCTCCAGCTCTTCCTTGGCCTGGCTGAGGTTGGAGATGGAGCTCTaGAGGTCAGTGATCAGGCTAGACAGCTGCTGCTTTTCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: CSSSSLAWLRLEMEL*RSVIRLDSCCFSSS
Trigger: CGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGATCACTGACCTGCAGAGCTCCATCTCCAACCTCAGCCAGGCCAAGGAAGAGCTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GAGGCAACCTTCTGTAGCTCTAGGAAGCGAATCTCCCTCTTGGCCTaGTGGCTAGGTGGGGAGAGCTCTTCAGGGAATGTGCTAGAACAG +
Preference number: 5 (lower is better)
Translates to: EATFCSSRKRISLLA*WLGGESSSGNVLEQ
Trigger: CTGTTCTAGCACATTCCCTGAAGAGCTCTCCCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTTCCTAGAGCTACAGAAGGTTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000543937.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CTGCCACAGCCTGAAGAACTCTTCCAACTCTTTCTGGGGGTCTTCTaGAGATGGGACTGCAATGGCTCCTCAGCTGCAGTTTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPQPEELFQLFLGVF*RWDCNGSSAAVSSW
Trigger: CCAGGAGGAAACTGCAGCTGAGGAGCCATTGCAGTCCCATCTCCAGAAGACCCCCAGAAAGAGTTGGAAGAGTTCTTCAGGCTGTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535111.5
ENST00000543450.1
CDS CCA 90 bp TCCCCTAACCCACCCACTCTTAGTGAGCTCAGCCTCACATTATCCTaGGCAACCCCAGCGTTCTGTGGATCAGACAGCAAGCAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: SPNPPTLSELSLTLS*ATPAFCGSDSKQKG
Trigger: TCCCTTCTGCTTGCTGTCTGATCCACAGAACGCTGGGGTTGCCCAGGATAATGTGAGGCTGAGCTCACTAAGAGTGGGTGGGTTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535087.5
ENST00000535838.5
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACAGTCCCTGGGACTTTaGGAGCTCATGGTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPQSLGL*ELMVEW
Trigger: CCACTCTACCATGAGCTCCAAAAGTCCCAGGGACTG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGACAGTCCCTGGGACTTTaGGAGCTCATGGTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRQSLGL*ELMVEW
Trigger: CCACTCTACCATGAGCTCCAAAAGTCCCAGGGACTG...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTTCTCGGTGAGGAGCTaGCGGTTCTCAGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKFSVRS*RFSASS
Trigger: GGAGCTAGCTGAGAACCGCAAGCTCCTCACCGAGAA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGGAAAGCTGGTTGATTTaGCGATCCATCTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRESWLI*RSIWLF
Trigger: GAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTC...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCCTCCGAAAGCTGGTaGATTTTGCGATCCATCTGG +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSSESW*ILRSIW
Trigger: CCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCAGCTCGCAGCTCTTaGTTTTCCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSARSS*FSFCSC
Trigger: GCAGCTGCAGAAGGAAAACAAAGAGCTGCGAGCTGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTTGGTCATGGTGATGTaGATGATCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGLVMVM*MICVVR
Trigger: GCGCACCACGCAGATCATCAACATCACCATGACCAA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTCCACATCTAGCTTCTaGGTCATGGTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLSTSSF*VMVMLM
Trigger: CATCAACATCACCATGACCAAGAAGCTAGATGTGGA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCAGTAGTGCTCTGTTaGCGCCCTTCATGTCGGTCT +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSVVLC*RPSCRS
Trigger: AGACCGACATGAAGGGCGCAAACAGAGCACTACTGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATGCAGAATCTCCAGCTaGGCAGCCTTCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRCRISS*AAFSFS
Trigger: GGAGAAGGAGAAGGCTGCCAAGCTGGAGATTCTGCA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCATGCAGAATCTCCAGCTaGGCAGCCTTCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPCRISS*AAFSFS
Trigger: GGAGAAGGAGAAGGCTGCCAAGCTGGAGATTCTGCA...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTTTCTCAGTTGCTTTTaGCTGCTCAGACCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PTPLLRHRAHPSWERASSFLSCF*LLRPQL
Trigger: CAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAAA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCCAGGCAGCTACTTCTTaGACGAGCTGCTCACACTCA +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGQAATS*TSCSHS
Trigger: TGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCTG...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCATACTGTGCCTCCTCTaGCTGGCTATCCTCATACCG +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGILCLL*LAILIP
Trigger: CGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTAT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTACACTCATCTTCAGCCTaGCTGTGGTCTTGTACCTTG +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLHSSSA*LWSCTL
Trigger: CAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTG...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCAGGACCTTGACCTaGGCACCCTCATACTTGGCA +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSRTLT*APSYLA
Trigger: TGCCAAGTATGAGGGTGCCAAGGTCAAGGTCCTGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGTTCCACCTGCTTAGTTaGCTCTCTCTGAAATACCTC +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLFHLLS*LSLKYL
Trigger: GAGGTATTTCAGAGAGAGCAAACTAAGCAGGTGGAA...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393695.8
CDS TCA 90 bp TGCACTCCAGACTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: CTPDSWWKPPHTRTG*SPAVWLRISFHLAA
Trigger: CGCAGCCAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGTCTGGAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358965.10
CDS TCA 90 bp AGAGACCCTGTCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: RDPVSWWKPPHTRTG*SPAVWLRISFHLAA
Trigger: CGCAGCCAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGACAGGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368959.9
CDS TCA 90 bp TTCTGCCACAGCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: FCHSSWWKPPHTRTG*SPAVWLRISFHLAA
Trigger: CGCAGCCAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGCTGTGGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541641.5
CDS TCA 90 bp GCTGCAGTTTCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: AAVSSWWKPPHTRTG*SPAVWLRISFHLAA
Trigger: CGCAGCCAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGAAACTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS GCA 90 bp CTCTACCCTGGCTTGGAGCTGTGTGTTGTTTGCAGCAAGAGTGGCTaGCTCTTGCTTCAAGGTTTCCAGCTGCAAGACATCACCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LYPGLELCVVCSKSG*LLLQGFQLQDITQH
Trigger: GTGCTGGGTGATGTCTTGCAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCTTGCTGCAAACAACACACAGCTCCAAGCCAGGGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TCTGTCCTGCCAGCAGCCTCAGATTGGGCTCCTGAGCCAGATGCGTaGTCCTTTTCTTTCTTAGCCAGCTGTTCCTTCAGTTGCTTCACG +
Preference number: 5 (lower is better)
Translates to: SVLPAASDWAPEPDA*SFSFLASCSFSCFT
Trigger: CGTGAAGCAACTGAAGGAACAGCTGGCTAAGAAAGAAAAGGAGCACGCATCTGGCTCAGGAGCCCAATCTGAGGCTGCTGGCAGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GCAACCTTCTGTAGCTCTAGGAAGCGAATCTCCCTCTTGGCCTGGTaGCTAGGTGGGGAGAGCTCTTCAGGGAATGTGCTAGAACAGGTA +
Preference number: 5 (lower is better)
Translates to: ATFCSSRKRISLLAW*LGGESSSGNVLEQV
Trigger: TACCTGTTCTAGCACATTCCCTGAAGAGCTCTCCCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTTCCTAGAGCTACAGAAGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000543937.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TGGCGGGCCTTCTCACATTCCTCCTTCAAAGTCATCAGCTGTTCCTaGAACATGGCGCCATACTGTGCCTCCTCTTGCTGGCTATCCTCA +
Preference number: 5 (lower is better)
Translates to: WRAFSHSSFKVISCS*NMAPYCASSCWLSS
Trigger: TGAGGATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATGTTCCAGGAACAGCTGATGACTTTGAAGGAGGAATGTGAGAAGGCCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CAGCCTGAAGAACTCTTCCAACTCTTTCTGGGGGTCTTCTGGAGATaGGACTGCAATGGCTCCTCAGCTGCAGTTTCCTCCTGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: QPEELFQLFLGVFWR*DCNGSSAAVSSWWK
Trigger: CTTCCACCAGGAGGAAACTGCAGCTGAGGAGCCATTGCAGTCCCATCTCCAGAAGACCCCCAGAAAGAGTTGGAAGAGTTCTTCAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535111.5
ENST00000543450.1
CDS-3UTR CAA 90 bp GAGAAGGCACTGAGAGGGACAGTAGGCGGAGGACCAGGTGAGGTCAGCATCGGGATTCTGTCAATGATCTaGATGAAGATGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: EKALRGTVGGGPGEVSIGILSMI*MKMLQS
Trigger: GGACTGCAGCATCTTCATCAAGATCATTGACAGAAT...CCCGATGCTGACCTCACCTGGTCCTCCGCCTACTGTCCCTCTCAGTGCCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AAAAGGAGGCAAGGTAGGGAGAGCGCCCACACTGTCCATGCTCCAGGCCCCCTGATTCTGTCAATGATCTaGATGAAGATGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: KRRQGRESAHTVHAPGPLILSMI*MKMLQS
Trigger: GGACTGCAGCATCTTCATCAAGATCATTGACAGAAT...CAGGGGGCCTGGAGCATGGACAGTGTGGGCGCTCTCCCTACCTTGCCTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCTCCGAAAGCTGGTaGATTTTGCGATCCATCTGG +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRSSESW*ILRSIW
Trigger: CCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGA...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCTTCAAGGCATTTCTaGTCCTGCAGGGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSSRHF*SCRAAL
Trigger: CAGCGCAGCCCTGCAGGACAAGAAATGCCTTGAAGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ATAATCCAATGTCGTCCTGCTTGGCGAGCCCAATCACCAAGCTTCCTGAACAGCCTGCTCCTGCAGCTCTaGGTTCTGCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: IIQCRPAWRAQSPSFLNSLLLQL*VLLLLG
Trigger: GCCAAGAAGCAGCAGAACCAAGAGCTGCAGGAGCAG...GCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp ATAGTCGGTCTCCAATGGGCCTTCCTGGCCTCACATCTCAGCTTAGTCAGGCTCTCAGCTCGCAGCTCTTaGTTTTCCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IVGLQWAFLASHLSLVRLSARSS*FSFCSC
Trigger: GCAGCTGCAGAAGGAAAACAAAGAGCTGCGAGCTGA...GAGCCTGACTAAGCTGAGATGTGAGGCCAGGAAGGCCCATTGGAGACCGACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp AGCTTAGTCAGGCTCTTTCACAGCCTCTGTTCACACTGCTCTTCTCGTCAACCTGTCTGTTCAGCCTCCTaGGTCTTCAGCCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLVRLFHSLCSHCSSRQPVCSAS*VFSPAC
Trigger: GCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGAC...AGGTTGACGAGAAGAGCAGTGTGAACAGAGGCTGTGAAAGAGCCTGACTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp CCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTCTTTAAAGCATCAGTaGCCACCTGGAATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PLLRHRAHPSWERASSGRSLKHQ*PPGICP
Trigger: TGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGA...CCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGGGCAGGCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGTCCACATCTAGCTTCTaGGTCATGGTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: RAGITVSRGLATVGLGAESTSSF*VMVMLM
Trigger: CATCAACATCACCATGACCAAGAAGCTAGATGTGGA...CTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGCCTGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp TCCCACCCCAGTGCAAGTCTGGGGAAGGTAGGGTGTGAGCTGCTGCTGAAGGCTTCCACATCTAGCTTCTaGGTCATGGTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: SHPSASLGKVGCELLLKASTSSF*VMVMLM
Trigger: CATCAACATCACCATGACCAAGAAGCTAGATGTGGA...AGCCTTCAGCAGCAGCTCACACCCTACCTTCCCCAGACTTGCACTGGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAAGCTTCTTGGGTGTGTaGAGGATGCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPSFLGV*RMLKAI
Trigger: GATGGCCTTCAGCATCCTCAACACACCCAAGAAGCT...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAAGCTTCTTGGGTGTGTaGAGGATGCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSFLGV*RMLKAI
Trigger: GATGGCCTTCAGCATCCTCAACACACCCAAGAAGCT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCACTGTTCCCTAGCTTCTaGGGTGTGTTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: HQDSRNQGLLLLWSLLDPLFPSF*GVLRML
Trigger: CAGCATCCTCAACACACCCAAGAAGCTAGGGAACAG...TGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGACTGTCTCTAGGGGTTaGGCTACTGTTGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKTVSRG*ATVGLG
Trigger: TCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGT...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCATTAGCCACCTGAAGTaGCTGCTGCAGAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGISHLK*LLQNLQ
Trigger: CTGGAGATTCTGCAGCAGCAACTTCAGGTGGCTAAT...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAATTAGCCACCTGAAGTaGCTGCTGCAGAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRISHLK*LLQNLQ
Trigger: CTGGAGATTCTGCAGCAGCAACTTCAGGTGGCTAAT...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTTTCTCAGTTGCTTTTaGCTGCTCAGACCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGFLSCF*LLRPQL
Trigger: CAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAAA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCTTCAAGGCTGCCCTaGGTGACCTTCAAGGACTCT +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSSRLP*VTFKDS
Trigger: AGAGTCCTTGAAGGTCACCAAGGGCAGCCTTGAAGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCAGTTGCTTCACGGTTaGCCGAAGTTCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKQLLHG*PKFLQL
Trigger: GAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACTG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTCAGAGGGTTGTTGGGGGACAAATCAGGTATAATTGTCATGAGTGCTTTATGTAACTGCCGGCCAAGGTaGGCCCGCTCACCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: LRGLLGDKSGIIVMSALCNCRPR*ARSPSP
Trigger: GGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGTT...ACATAAAGCACTCATGACAATTATACCTGATTTGTCCCCCAACAACCCTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCCAGGACCTTGACCTaGGCACCCTCATACTTGGCA +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSRTLT*APSYLA
Trigger: TGCCAAGTATGAGGGTGCCAAGGTCAAGGTCCTGGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGTCAACCTGGCACACACACCTATGGATGCTTTCAAGACTCAGCAGGAGCGATACTCTCCTCCAGGACCTaGACCTTGGCACCCTCATAC +
Preference number: 5 (lower is better)
Translates to: RQPGTHTYGCFQDSAGAILSSRT*TLAPSY
Trigger: GTATGAGGGTGCCAAGGTCAAGGTCCTGGAGGAGAG...TATCGCTCCTGCTGAGTCTTGAAAGCATCCATAGGTGTGTGTGCCAGGTTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp CCCATGGCTGCTTCACAGCAAACACGTCCCAATCTAAGCCCACTTCTCTGTTCTCCAATGTCGTCCTGCTaGGCGAGCCCAATCACCAAG +
Preference number: 5 (lower is better)
Translates to: PMAASQQTRPNLSPLLCSPMSSC*ASPITK
Trigger: CTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGG...AGAACAGAGAAGTGGGCTTAGATTGGGACGTGTTTGCTGTGAAGCAGCCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS TCA 90 bp CTCCAATGCGCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCCCCATAGA +
Preference number: 5 (lower is better)
Translates to: LQCASWWKPPHTRTG*SPAVWLRISFHPHR
Trigger: TCTATGGGGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGCGCATTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351960.10
ENST00000537217.5
CDS TCA 90 bp CTCCAATGCGCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LQCASWWKPPHTRTG*SPAVWLRISFHLRL
Trigger: CAACCTCAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGCGCATTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366394.7
CDS TCA 90 bp GCCAAACCATCTGCTTCAGCCTCACCACCTGGGATTCATCTTGATTaGTTTGGGTGTGTTGGTGGGCAGTGGCTGCCACAGCCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: AKPSASASPPGIHLD*FGCVGGQWLPQPEE
Trigger: TTCTTCAGGCTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGTGGTGAGGCTGAAGCAGATGGTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535111.5
CDS TCA 90 bp CTCCAATGCGCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LQCASWWKPPHTRTG*SPAVWLRISFHLGK
Trigger: CTTCCCTAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGCGCATTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535087.5
CDS GCA 90 bp TCAGCAAGCTGCTTCTTCAGCCGTCTCATCTGGAACTGTGGGGTCTaGAGGATATCACCCATGGGAGAAGCTGGAGAACCTGAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: SASCFFSRLIWNCGV*RISPMGEAGEPERK
Trigger: CTTTCTCTCAGGTTCTCCAGCTTCTCCCATGGGTGATATCCTGCAGACCCCACAGTTCCAGATGAGACGGCTGAAGAAGCAGCTTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTCAGTCTCCAGCATCTCTACCCTGGCTTGGAGCTGTGTGTTGTTTaGAGCAAGAGTGGCTGCCTCTTGCTTCAAGGTTTCCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LSLQHLYPGLELCVV*SKSGCLLLQGFQLQ
Trigger: TTGCAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCTTGCTGCAAACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGGAGACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TACCCAAAGGCCCAGAAGAGCACAGTGGTAAACTGGACTCAGCTTTaGACATGTGGTCAAGACTGTGGCTGTGACCCCAGCAGAGGGTTA +
Preference number: 5 (lower is better)
Translates to: YPKAQKSTVVNWTQL*TCGQDCGCDPSRGL
Trigger: TAACCCTCTGCTGGGGTCACAGCCACAGTCTTGACCACATGTGCAAAGCTGAGTCCAGTTTACCACTGTGCTCTTCTGGGCCTTTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000536119.5
ENST00000540843.5
CDS-3UTR CAA 90 bp ACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCATTCTGTCAATGATCTaGATGAAGATGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: TPLLRHRAHPSWERASSGILSMI*MKMLQS
Trigger: GGACTGCAGCATCTTCATCAAGATCATTGACAGAAT...GCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGAACCTGAGAGAAAGTaGTTCCCACTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSREPERK*FPLEEE
Trigger: CTCCTCTTCCAGTGGGAACAACTTTCTCTCAGGTTC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGAGAAAGCTGGTTGATTTaGCGATCCATCTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: QPPGQQEPGPTPLMVPSRESWLI*RSIWLF
Trigger: GAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTC...TCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCTCCGAAAGCTGGTaGATTTTGCGATCCATCTGG +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSSESW*ILRSIW
Trigger: CCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGTCTTTAAAGCATCAGTaGCCACCTGGAATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PEAKRKTGQAQGPSHQNQSLKHQ*PPGICP
Trigger: TGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGA...CTGGTTTTGATGGCTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTATCTTTAAAGCATCAGTaGCCACCTGGAATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PSHQDSRNQGLLLLWSLLSLKHQ*PPGICP
Trigger: TGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGA...TAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CTCAGGCCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGTCTTTAAAGCATCAGTaGCCACCTGGAATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: LRPPSHERGHNPMSSCLASLKHQ*PPGICP
Trigger: TGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGA...CGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGGCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp CCAACCCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTTCCACATCTAGCTTCTaGGTCATGGTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: PTPLLRHRAHPSWERASSSTSSF*VMVMLM
Trigger: CATCAACATCACCATGACCAAGAAGCTAGATGTGGA...AGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp ATAATCCAATGTCGTCCTGCTTGGCGAGCCCAATCACCAAGCTTCCTGAACAGCTTGGCACCCTCATACTaGGCAGTCATCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: IIQCRPAWRAQSPSFLNSLAPSY*AVITSS
Trigger: GCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCAA...GCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp ATAATCCAATGTCGTCCTGCTTGGCGAGCCCAATCACCAAGCTTCCTGAACAGCTCCAGGACCTTGACCTaGGCACCCTCATACTTGGCA +
Preference number: 5 (lower is better)
Translates to: IIQCRPAWRAQSPSFLNSSRTLT*APSYLA
Trigger: TGCCAAGTATGAGGGTGCCAAGGTCAAGGTCCTGGA...GCTGTTCAGGAAGCTTGGTGATTGGGCTCGCCAAGCAGGACGACATTGGATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS TCA 90 bp GCTGCAGTTTCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCCCCATAGA +
Preference number: 5 (lower is better)
Translates to: AAVSSWWKPPHTRTG*SPAVWLRISFHPHR
Trigger: TCTATGGGGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGAAACTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535111.5
CDS TCA 90 bp GCTGCAGTTTCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: AAVSSWWKPPHTRTG*SPAVWLRISFHLGK
Trigger: CTTCCCTAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGAAACTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534987.5
CDS TCA 90 bp ACCAAACCATCTGCTTCAGCCTCACCACCTGGGATTCATCTTGATTaGTTTGGGTGTGTTGGTGGGCAGTGGCTGCCACAGCCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: TKPSASASPPGIHLD*FGCVGGQWLPQPEE
Trigger: TTCTTCAGGCTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGTGGTGAGGCTGAAGCAGATGGTTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS GCA 90 bp AGCTCCAGCTCCAGCTCATCCCTATTACTTCTCTCATCAGCAAGCTaGTTCTTCAGCCGTCTCATCTGGAACTGTGGGGTCTGCAGGATA +
Preference number: 5 (lower is better)
Translates to: SSSSSSSLLLLSSAS*FFSRLIWNCGVCRI
Trigger: TATCCTGCAGACCCCACAGTTCCAGATGAGACGGCTGAAGAAGCAGCTTGCTGATGAGAGAAGTAATAGGGATGAGCTGGAGCTGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp TGGTTGATTTTGCGATCCATCTGGCTCTTCTCTGTCTTCAGGTCCTaGCACTGCTTCAGGGTTTCATGCAGCCGCATGGTAAGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: WLILRSIWLFSVFRS*HCFRVSCSRMVRLS
Trigger: TGAGAGCCTTACCATGCGGCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAATCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CCTTCTCACATTCCTCCTTCAAAGTCATCAGCTGTTCCTGGAACATaGCGCCATACTGTGCCTCCTCTTGCTGGCTATCCTCATACCGCT +
Preference number: 5 (lower is better)
Translates to: PSHIPPSKSSAVPGT*RHTVPPLAGYPHTA
Trigger: AGCGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATGTTCCAGGAACAGCTGATGACTTTGAAGGAGGAATGTGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGAAAGCTGGTTGATTTaGCGATCCATCTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRESWLI*RSIWLF
Trigger: GAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTC...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGTCCTCCGAAAGCTGGTaGATTTTGCGATCCATCTGG +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKSSESW*ILRSIW
Trigger: CCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGA...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp GCATCACTGTCTCTAGGGGTTTGGCTACTGTTGGCCTGGGAGCTGAGAGAAGGCTCTTTAAAGCATCAGTaGCCACCTGGAATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: ASLSLGVWLLLAWELREGSLKHQ*PPGICP
Trigger: TGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGA...GCCTTCTCTCAGCTCCCAGGCCAACAGTAGCCAAACCCCTAGAGACAGTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGCAGTTCTTGATCCTGTaGCTGGATGGTGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: SRNQGLLLLWSLLDPEAKQFLIL*LDGGIE
Trigger: CTCAATGCCACCATCCAGCAACAGGATCAAGAACTG...CTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCCCCAAGCCATGAACGTGGGCATAATCCAATGTCGTCCTGCTTGGCGAGCCCATCCACGAAGCCTTTCTaGACCACTTGCTTTTTATTC +
Preference number: 5 (lower is better)
Translates to: PPSHERGHNPMSSCLASPSTKPF*TTCFLF
Trigger: GAATAAAAAGCAAGTGGTCAAGAAAGGCTTCGTGGA...TGGGCTCGCCAAGCAGGACGACATTGGATTATGCCCACGTTCATGGCTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS TCA 90 bp CATGGGCTAGGCCTGCTAGGTGGCATGGAGGCACAAGGGCTTACCTaGATTTTATATTCAAACTGTTCCCAGTCCCTGGGACTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: HGLGLLGGMEAQGLT*ILYSNCSQSLGLLE
Trigger: CTCCAAAAGTCCCAGGGACTGGGAACAGTTTGAATATAAAATTCAGGTAAGCCCTTGTGCCTCCATGCCACCTAGCAGGCCTAGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS TCA 90 bp CATTTAGCGAGGACCTCAGGCATTACCTGCTTAGTTTGCTCTCTCTaGAATACCTCTAGCTGCTCCACCTGGGCAGTGAGTTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: HLARTSGITCLVCSL*NTSSCSTWAVSFCL
Trigger: GAGGCAGAAACTCACTGCCCAGGTGGAGCAGCTAGAGGTATTTCAGAGAGAGCAAACTAAGCAGGTAATGCCTGAGGTCCTCGCTAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540588.1
CDS GCA 90 bp ATTTTGCGATCCATCTGGCTCTTCTCTGTCTTCAGGTCCTGGCACTaGTTCAGGGTTTCATGCAGCCGCATGGTAAGGCTCTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: ILRSIWLFSVFRSWH*FRVSCSRMVRLSFL
Trigger: CAAGAATGAGAGCCTTACCATGCGGCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTGGGATTCATCTTGATTGATTTGGGTGTGTTGGTGGGCAGTGGCTaGCACAGCCTGAAGAACTCTTCCAACTCTTTCTGGGGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LGFILIDLGVLVGSG*HSLKNSSNSFWGSS
Trigger: AGAAGACCCCCAGAAAGAGTTGGAAGAGTTCTTCAGGCTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535111.5
ENST00000543450.1
CDS CCA 90 bp AGGTCTCCATTCTCCTCCGAAAGCTGGTTGATTTTGCGATCCATCTaGCTCTTCTCTGTCTTCAGGTCCTGGCACTGCTTCAGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: RSPFSSESWLILRSI*LFSVFRSWHCFRVS
Trigger: TGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAATGGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCTTTAAAGCATCAGTaGCCACCTGGAATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSLKHQ*PPGICP
Trigger: TGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGGGTACGAGGCAGCTaGCTGGTGATACTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLWVRGS*LVILSG
Trigger: CCCACTCAGTATCACCAGCAAGCTGCCTCGTACCCA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGATCCACATCTAGCTTCTaGGTCATGGTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRSTSSF*VMVMLM
Trigger: CATCAACATCACCATGACCAAGAAGCTAGATGTGGA...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCGGCGCAGGGTCTCTaGGGGGTCTCCAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSAQGL*GVSSFH
Trigger: ATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGGCCCTTTAGTGCTTaGCCTTGCCCTTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLWPFSA*PCPWLE
Trigger: CTCGAGCCAAGGGCAAGGCAAAGCACTAAAGGGCCA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTATGAGCCAGTGCCTCTaGCAGGGTAGCGAACTCCAC +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLMSQCL*QGSELH
Trigger: GTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCAT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp AGCTTAGTCAGGCTCTTTCACAGCCTCTGTTCACACTGCTCTTCTCGTCAACCTTGGGTACGAGGCAGCTaGCTATGGAAAGGAAACCTG +
Preference number: 5 (lower is better)
Translates to: SLVRLFHSLCSHCSSRQPWVRGS*LWKGNL
Trigger: CAGGTTTCCTTTCCATAGCAAGCTGCCTCGTACCCA...AGGTTGACGAGAAGAGCAGTGTGAACAGAGGCTGTGAAAGAGCCTGACTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS TCA 90 bp AAGGTGCTTACTCTGCAGAAAACTGCACACAAAGTCCAGTCTCTCTaGCACCGGCTGCTTCAAGATTTGCTGTCCCTCTTCAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: KVLTLQKTAHKVQSL*HRLLQDLLSLFSAM
Trigger: CATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAGTAAGCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537905.5
CDS GCA 90 bp TCCTTTTCTTTCTTAGCCAGCTGTTCCTTCAGTTGCTTCACGGTTTaGCGAAGTTCCTCCAGCTCTTTTATCTGGGCTGCCTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: SFSFLASCSFSCFTV*RSSSSSFIWAASRP
Trigger: TGGTCTGGAGGCAGCCCAGATAAAAGAGCTGGAGGAACTTCGGCAAACCGTGAAGCAACTGAAGGAACAGCTGGCTAAGAAAGAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTCTGCAGAAAACTGCACACAAAGTCCAGTCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCCTCTTCAGTGCCATGGATTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LCRKLHTKSSLSDTG*FKICCPSSVPWILS
Trigger: TGACAGAATCCATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537905.5
CDS CCA 90 bp TCAAACTGTTCCCAGTCCCTGGGACTTTTGGAGCTCATGGTAGAGTaGTATAAGAGCAGCATGGTCATCTTCGCCAGTTCCAGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: SNCSQSLGLLELMVE*YKSSMVIFASSSSD
Trigger: ATCAGAGCTGGAACTGGCGAAGATGACCATGCTGCTCTTATACCACTCTACCATGAGCTCCAAAAGTCCCAGGGACTGGGAACAGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534971.1
ENST00000534987.5
ENST00000535947.5
ENST00000536119.5
ENST00000537217.5
ENST00000537930.5
ENST00000540843.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp AACTCCCGCAGCTTAAAGGAAAGGTCTCCATTCTCCTCCGAAAGCTaGTTGATTTTGCGATCCATCTGGCTCTTCTCTGTCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: NSRSLKERSPFSSES*LILRSIWLFSVFRS
Trigger: GGACCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAATGGAGACCTTTCCTTTAAGCTGCGGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp GGAGGCAGCACAGATGAACGGGAAGCTATATTACACCATCTGGAATaGCTCAACTCTAAACTGTCAGGAAGCCTGGAGAACACACCTAGG +
Preference number: 5 (lower is better)
Translates to: GGSTDEREAILHHLE*LNSKLSGSLENTPR
Trigger: CCTAGGTGTGTTCTCCAGGCTTCCTGACAGTTTAGAGTTGAGCCATTCCAGATGGTGTAATATAGCTTCCCGTTCATCTGTGCTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS CCA 90 bp GAGACGGAGGCAGCACAGATGAACGGGAAGCTATATTACACCATCTaGAATGGCTCAACTCTAAACTGTCAGGAAGCCTGGAGAACACAC +
Preference number: 5 (lower is better)
Translates to: ETEAAQMNGKLYYTI*NGSTLNCQEAWRTH
Trigger: GTGTGTTCTCCAGGCTTCCTGACAGTTTAGAGTTGAGCCATTCCAGATGGTGTAATATAGCTTCCCGTTCATCTGTGCTGCCTCCGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS-3UTR CAA 90 bp CCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAATTCTGTCAATGATCTaGATGAAGATGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PGQQEPGPTPLMVPSRSRILSMI*MKMLQS
Trigger: GGACTGCAGCATCTTCATCAAGATCATTGACAGAAT...TCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTGCTGGATGGTGGCATaGAGTGTGGTGAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLCWMVA*SVVSSE
Trigger: CTCTGAGCTCACCACACTCAATGCCACCATCCAGCA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTTGGCACCCTCATACTaGGCAGTCATCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLLAPSY*AVITSS
Trigger: GCTGGAGGTGATGACTGCCAAGTATGAGGGTGCCAA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTTCCAGGACCTTGACCTaGGCACCCTCATACTTGGCA +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSRTLT*APSYLA
Trigger: TGCCAAGTATGAGGGTGCCAAGGTCAAGGTCCTGGA...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTGCACACAAAGTCCAGTCTCTCTGACACCGGCTGCTTCAAGATTTaGTGTCCCTCTTCAGTGCCATGGATTCTGTCAATGATCTTGATG +
Preference number: 5 (lower is better)
Translates to: LHTKSSLSDTGCFKI*CPSSVPWILSMILM
Trigger: CATCAAGATCATTGACAGAATCCATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000366394.7
ENST00000368959.9
ENST00000393695.8
ENST00000534987.5
ENST00000535087.5
ENST00000535947.5
ENST00000536119.5
ENST00000537217.5
ENST00000537905.5
ENST00000537930.5
ENST00000540843.5
ENST00000541641.5
ENST00000541719.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp TTCTGCAGAAAACTGCACACAAAGTCCAGTCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCCTCTTCAGTGCCATGGATTCTGTCA +
Preference number: 5 (lower is better)
Translates to: FCRKLHTKSSLSDTG*FKICCPSSVPWILS
Trigger: TGACAGAATCCATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000366394.7
ENST00000368959.9
ENST00000393695.8
ENST00000534987.5
ENST00000535087.5
ENST00000535947.5
ENST00000536119.5
ENST00000537217.5
ENST00000537930.5
ENST00000540843.5
ENST00000541641.5
ENST00000541719.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 90 bp CCCTGTCTCCTAAACCTACTGAACTCCTATTCTTCCTTTACAACCTaGCTCAAATGCCTTCTCCCAAACTCTCCTTATCGCCCCCACCAT +
Preference number: 5 (lower is better)
Translates to: PCLLNLLNSYSSFTT*LKCLLPNSPYRPHH
Trigger: ATGGTGGGGGCGATAAGGAGAGTTTGGGAGAAGGCATTTGAGCCAGGTTGTAAAGGAAGAATAGGAGTTCAGTAGGTTTAGGAGACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTAGCTTCTTGGGTGTGTaGAGGATGCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLSFLGV*RMLKAI
Trigger: GATGGCCTTCAGCATCCTCAACACACCCAAGAAGCT...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCAGGCAGCTACTTCTTaGACGAGCTGCTCACACTCA +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLQAATS*TSCSHS
Trigger: TGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCTG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 90 bp CTGCACACAAAGTCCAGTCTCTCTGACACCGGCTGCTTCAAGATTTaGTGTCCCTCTTCAGTGCCATGGCTAGAAAAAGAGCAAGTATTA +
Preference number: 5 (lower is better)
Translates to: LHTKSSLSDTGCFKI*CPSSVPWLEKEQVL
Trigger: TAATACTTGCTCTTTTTCTAGCCATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS GCA 90 bp TTCTGCAGAAAACTGCACACAAAGTCCAGTCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCCTCTTCAGTGCCATGGCTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: FCRKLHTKSSLSDTG*FKICCPSSVPWLEK
Trigger: TTTTTCTAGCCATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS CCA 90 bp TGGACTCTCCAATCCCACGAGCTGAGGAAGCAGCTTCTTCATAGCTaGATAAGAAAGGTGCTTACTCTGCAGAAAACTGCACACAAAGTC +
Preference number: 5 (lower is better)
Translates to: WTLQSHELRKQLLHS*IRKVLTLQKTAHKV
Trigger: GACTTTGTGTGCAGTTTTCTGCAGAGTAAGCACCTTTCTTATCCAGCTATGAAGAAGCTGCTTCCTCAGCTCGTGGGATTGGAGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537905.5
CDS CCA 90 bp ATCAGGTATAATTGTCATGAGTGCTTTATGTCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCTCAGATCCAGGCTGTCAATACTCAA +
Preference number: 5 (lower is better)
Translates to: IRYNCHECFMSGDTE*GPLLAAQIQAVNTQ
Trigger: TTGAGTATTGACAGCCTGGATCTGAGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGACATAAAGCACTCATGACAATTATACCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS-3UTR CAA 90 bp AGAAGGCATTTTGTCCAGCCCTTTTTGAAAGTGACCATTTCCCATCCTTACTACCTGCACCTTGCTGGCTaGGTCAGAGTCAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: RRHFVQPFLKVTISHPYYLHLAG*VRVSQF
Trigger: AAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAG...GTAGTAAGGATGGGAAATGGTCACTTTCAAAAAGGGCTGGACAAAATGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp AGCTTAGTCAGGCTCTTTCACAGCCTCTGTTCACACTGCTCTTCTCGTCAACCTTCCACATCTAGCTTCTaGGTCATGGTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: SLVRLFHSLCSHCSSRQPSTSSF*VMVMLM
Trigger: CATCAACATCACCATGACCAAGAAGCTAGATGTGGA...AGGTTGACGAGAAGAGCAGTGTGAACAGAGGCTGTGAAAGAGCCTGACTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp CCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTGCTTCAGTTCTTGATCCTGTaGCTGGATGGTGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: PAIKTSLKSGCDGEVTLLQFLIL*LDGGIE
Trigger: CTCAATGCCACCATCCAGCAACAGGATCAAGAACTG...AAGCAAAGTCACTTCTCCATCACAACCAGATTTGAGGCTGGTTTTGATGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS-3UTR CAA 90 bp CGTCAACCTGGCACACACACCTATGGATGCTTTCAAGACTCAGCAGGAGCGATATTTGTCCAGCCCTTTTaGAAAGTGACCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: RQPGTHTYGCFQDSAGAIFVQPF*KVTISH
Trigger: ATGGGAAATGGTCACTTTCAAAAAGGGCTGGACAAA...TATCGCTCCTGCTGAGTCTTGAAAGCATCCATAGGTGTGTGTGCCAGGTTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS TCA 90 bp GAAATTCACCCCCACCTCCTTCAAACAATAGGTCCTACCAAGGAATaGCTTCTCTCAGGACCAACATGTCCTGTGATTGTTTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: EIHPHLLQTIGPTKE*LLSGPTCPVIVFLE
Trigger: CTCCAGAAAAACAATCACAGGACATGTTGGTCCTGAGAGAAGTCATTCCTTGGTAGGACCTATTGTTTGAAGGAGGTGGGGGTGAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS-3UTR CAA 90 bp TTTCTCCTAAACCTTTCAATTACAGCCACCAAGGTTTCCTCAATGCCTTTAGGATTGGTCATGGTGATGTaGATGATCTGCGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: FLLNLSITATKVSSMPLGLVMVM*MICVVR
Trigger: GCGCACCACGCAGATCATCAACATCACCATGACCAA...TCCTAAAGGCATTGAGGAAACCTTGGTGGCTGTAATTGAAAGGTTTAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS-3UTR CAA 90 bp CTTGCTATGGAAAGGAAACCTGCTGAGGTACAGTCCTTCACGCTAGAAGGCATTGCCTTTCTTGACCACTaGCTTTTTATTCCAACTGTG +
Preference number: 5 (lower is better)
Translates to: LAMERKPAEVQSFTLEGIAFLDH*LFIPTV
Trigger: CACAGTTGGAATAAAAAGCAAGTGGTCAAGAAAGGC...AATGCCTTCTAGCGTGAAGGACTGTACCTCAGCAGGTTTCCTTTCCATAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545721.1
CDS GCA 90 bp CCAACATGTCCTGTGATTGTTTTTCTGGAGCAAGCTTCCAGTGCCTaGTTCTCATTAAATAGCTACTTAATGTCTGATCACCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PTCPVIVFLEQASSA*FSLNSYLMSDHPAV
Trigger: CACAGCTGGGTGATCAGACATTAAGTAGCTATTTAATGAGAAGCAGGCACTGGAAGCTTGCTCCAGAAAAACAATCACAGGACATGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS GCA 90 bp AGTTATACATATAGCATGAGTGACCAGCAGAAAATGCCAAGGGCCTaGCACTTTAAGAGGACTGGCAAGATGACTATGTTTACACAATCC +
Preference number: 5 (lower is better)
Translates to: SYTYSMSDQQKMPRA*HFKRTGKMTMFTQS
Trigger: GGATTGTGTAAACATAGTCATCTTGCCAGTCCTCTTAAAGTGGCAGGCCCTTGGCATTTTCTGCTGGTCACTCATGCTATATGTATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS GCA 90 bp CCCACCATCAGGAACAATTGTTCTTTCCTCTATGTGCTCCCATATTaGTTGTTCCTCTACAAACTTAATTACAATCCTCCCTGGGTGGAT +
Preference number: 5 (lower is better)
Translates to: PTIRNNCSFLYVLPY*LFLYKLNYNPPWVD
Trigger: ATCCACCCAGGGAGGATTGTAATTAAGTTTGTAGAGGAACAAGCAATATGGGAGCACATAGAGGAAAGAACAATTGTTCCTGATGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS TCA 90 bp AGACTGAAGCCCACAATCTTTCAATTACAGCACACTATTGAACCTTaGAGAGAAAGCAACTTAATACCCAAAGGCCCAGAAGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: RLKPTIFQLQHTIEP*RESNLIPKGPEEHS
Trigger: ACTGTGCTCTTCTGGGCCTTTGGGTATTAAGTTGCTTTCTCTTCAAGGTTCAATAGTGTGCTGTAATTGAAAGATTGTGGGCTTCAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000536119.5
ENST00000540843.5
CDS GCA 90 bp TCCTTATCGCCCCCACCATCAGGAACAATTGTTCTTTCCTCTATGTaGTCCCATATTGCTTGTTCCTCTACAAACTTAATTACAATCCTC +
Preference number: 5 (lower is better)
Translates to: SLSPPPSGTIVLSSM*SHIACSSTNLITIL
Trigger: GAGGATTGTAATTAAGTTTGTAGAGGAACAAGCAATATGGGAGCACATAGAGGAAAGAACAATTGTTCCTGATGGTGGGGGCGATAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS CCA 90 bp GCCAATTGGCCCTTATCTGAATTCTTTCAGTGGTACAGCCAGGGATaGCAAATTGTCAAAGCTAGTCCCTCTAATTGCAAGTTATACATA +
Preference number: 5 (lower is better)
Translates to: ANWPLSEFFQWYSQG*QIVKASPSNCKLYI
Trigger: TATGTATAACTTGCAATTAGAGGGACTAGCTTTGACAATTTGCCATCCCTGGCTGTACCACTGAAAGAATTCAGATAAGGGCCAATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS TCA 90 bp AGGCTTGAAATTAATAACAGCAGGAAACAAAGTCTCTCAATCCTCTaGATCACAATATCCACACTGTCCATTTTGATGAAATTCACCCCC +
Preference number: 5 (lower is better)
Translates to: RLEINNSRKQSLSIL*ITISTLSILMKFTP
Trigger: GGGGGTGAATTTCATCAAAATGGACAGTGTGGATATTGTGATTCAGAGGATTGAGAGACTTTGTTTCCTGCTGTTATTAATTTCAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS CCA 90 bp CTCCCATATTGCTTGTTCCTCTACAAACTTAATTACAATCCTCCCTaGGTGGATGCTAGCTGTAATACTTGTTTCATTTTACTAAACTCC +
Preference number: 5 (lower is better)
Translates to: LPYCLFLYKLNYNPP*VDASCNTCFILLNS
Trigger: GGAGTTTAGTAAAATGAAACAAGTATTACAGCTAGCATCCACCCAGGGAGGATTGTAATTAAGTTTGTAGAGGAACAAGCAATATGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS GCA 72 bp CAGCTCCCCAAGCTCCCGCTGGGCCCGCAGCAGCTCTaGCCGCAGTCCCCCAGCGGCCTGCTTGCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: QLPKLPLGPQQL*PQSPSGLLALL
Trigger: GAGCAGAGCAAGCAGGCCGCTGGGGGACTGCGGGCAGAGCTGCTGCGGGCCCAGCGGGAGCTTGGGGAGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CCCGCTCAGCCCGGGAGGCCCGCTCAGCCTCGAGGCTaGGTTCCAGGCTGTCAGCCTGCTCCTGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: PAQPGRPAQPRG*VPGCQPAPAAS
Trigger: AGAAGCAGCAGGAGCAGGCTGACAGCCTGGAACGCAGCCTCGAGGCTGAGCGGGCCTCCCGGGCTGAGCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GCCCGCAGCAGCTCTGCCCGCAGTCCCCCAGCGGCCTaGTTGCTCTGCTCCAGCTCCTCACGGTGGCGTTTC +
Preference number: 6 (lower is better)
Translates to: ARSSSARSPPAA*LLCSSSSRWRF
Trigger: GAAACGCCACCGTGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACTGCGGGCAGAGCTGCTGCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CCAGCGGCCTGCTTGCTCTGCTCCAGCTCCTCACGGTaGCGTTTCTCGGCAGCGGCCTGCTCGGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PAACLLCSSSSR*RFSAAACSACS
Trigger: GCTGCAGGCCGAGCAGGCCGCTGCCGAGAAACGCCACCGTGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTCTGCCGCAGAGGAATCAGCTCCCCAAGCTCCCGCTaGGCCCGCAGCAGCTCTGCCCGCAGTCCCCCAGCG +
Preference number: 6 (lower is better)
Translates to: FCRRGISSPSSR*ARSSSARSPPA
Trigger: CGCTGGGGGACTGCGGGCAGAGCTGCTGCGGGCCCAGCGGGAGCTTGGGGAGCTGATTCCTCTGCGGCAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp AGCGCGGCCCGCAGCCGTTCCAGCTCATTGCCCATCTaGTCTGCCTCCCGCTCCATAGCCTGCAGCGCTGCC +
Preference number: 6 (lower is better)
Translates to: SAARSRSSSLPI*SASRSIACSAA
Trigger: GGCAGCGCTGCAGGCTATGGAGCGGGAGGCAGAGCAGATGGGCAATGAGCTGGAACGGCTGCGGGCCGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GCAGCAGCTCTGCCCGCAGTCCCCCAGCGGCCTGCTTaGTCTGCTCCAGCTCCTCACGGTGGCGTTTCTCGG +
Preference number: 6 (lower is better)
Translates to: AAALPAVPQRPA*SAPAPHGGVSR
Trigger: CCGAGAAACGCCACCGTGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACTGCGGGCAGAGCTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp CGCAGCAGCTCTGCCCGCAGTCCCCCAGCGGCCTGCTaGCTCTGCTCCAGCTCCTCACGGTGGCGTTTCTCG +
Preference number: 6 (lower is better)
Translates to: RSSSARSPPAAC*LCSSSSRWRFS
Trigger: CGAGAAACGCCACCGTGAGGAGCTGGAGCAGAGCAAGCAGGCCGCTGGGGGACTGCGGGCAGAGCTGCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp TCCCGGGCCTGGTCCAACTCCACTTCCAGAAACTGCCGGCCAAGGTaGGCCCGCTCACCCAGCCCCCGGTTCTCCTCTGCCAGCAGGCCA +
Preference number: 6 (lower is better)
Translates to: SRAWSNSTSRNCRPR*ARSPSPRFSSASRP
Trigger: TGGCCTGCTGGCAGAGGAGAACCGGGGGCTGGGTGAGCGGGCCAACCTTGGCCGGCAGTTTCTGGAAGTGGAGTTGGACCAGGCCCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp GTCAGAGAGGCCACCTGGGCAGTCAACCGGGCCCCATaGGCCTGGGAGGCCTGCTCCAGCTCTTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: VREATWAVNRAP*AWEACSSSSLA
Trigger: GGCCAAGGAAGAGCTGGAGCAGGCCTCCCAGGCTCATGGGGCCCGGTTGACTGCCCAGGTGGCCTCTCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CCCTGGTGGGGCTCTAGGGAGACCCGTTTGCGCTGCTaGCGGGTGGTGATGCCAGTGCCCTCGGCTATCTGG +
Preference number: 6 (lower is better)
Translates to: PWWGSRETRLRC*RVVMPVPSAIW
Trigger: CCAGATAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGCGCAAACGGGTCTCCCTAGAGCCCCACCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp GTGGTGGTGGCAATGCGCGGAGAACGGCGGGTTCCACTGCGAGTGTaGGGGGAAGCCTTGGACAGGGCCTTCTTTGAGGCTCCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: VVVAMRGERRVPLRV*GEALDRAFFEAPRR
Trigger: GCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTTCTCCGCGCATTGCCACCACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GGCCCGCAGCCGTTCCAGCTCATTGCCCATCTGCTCTaGCTCCCGCTCCATAGCCTGCAGCGCTGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: GPQPFQLIAHLL*LPLHSLQRCLC
Trigger: ACACAGGCAGCGCTGCAGGCTATGGAGCGGGAGGCAGAGCAGATGGGCAATGAGCTGGAACGGCTGCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CGTTTCTCGGCAGCGGCCTGCTCGGCCTGCAGCTGCTaGCAGAGGTGCTTAGCTGGCAGCAGCTCACTCACC +
Preference number: 6 (lower is better)
Translates to: RFSAAACSACSC*QRCLAGSSSLT
Trigger: GGTGAGTGAGCTGCTGCCAGCTAAGCACCTCTGCCAGCAGCTGCAGGCCGAGCAGGCCGCTGCCGAGAAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp GAGGGGCCAAGGCACGAGACCGAGTACGCCAGGCACTaGCTGCAGCCCTTAACAGACGCAGGCACGGGGACT +
Preference number: 6 (lower is better)
Translates to: EGPRHETEYARH*LQPLTDAGTGT
Trigger: AGTCCCCGTGCCTGCGTCTGTTAAGGGCTGCAGCCAGTGCCTGGCGTACTCGGTCTCGTGCCTTGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CAA 90 bp CCAGCTTGCTCACCTCTGCCCGCAGTGCCTCCAGCTTGGGGCCTGTaGGCTCTGTCCTGCCAGCAGCCTCAGATTGGGCTCCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: PACSPLPAVPPAWGL*ALSCQQPQIGLLSQ
Trigger: CTGGCTCAGGAGCCCAATCTGAGGCTGCTGGCAGGACAGAGCCAACAGGCCCCAAGCTGGAGGCACTGCGGGCAGAGGTGAGCAAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TGCCCTAGCTCCTGGGCCTTCTCCTCTAACTGGCCCTaGAGAGTCTCCAGAGCACTGTCCCGCTCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: CPSSWAFSSNWP*RVSRALSRSAR
Trigger: CCGGGCTGAGCGGGACAGTGCTCTGGAGACTCTGCAGGGCCAGTTAGAGGAGAAGGCCCAGGAGCTAGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp AAGGTTGGCCCGCTCACCCAGCCCCCGGTTCTCCTCTaGCAGCAGGCCATGCGCCTTCTTCAGCATGCTCAG +
Preference number: 6 (lower is better)
Translates to: KVGPLTQPPVLL*QQAMRLLQHAQ
Trigger: CTGAGCATGCTGAAGAAGGCGCATGGCCTGCTGGCAGAGGAGAACCGGGGGCTGGGTGAGCGGGCCAACCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GGCAGTCATCACCTCCAGCTCCCGGGCAGTGCTCTGTaGTTCTCGCTGCACCTCAGCCAGACGGGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: GSHHLQLPGSAL*FSLHLSQTGLS
Trigger: GCTGAGACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGGAGGTGATGACTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CACGCAGCTCCTCAAGCTCCTTGGGCTCCAGTGGGCTaGCCGCCTGCTTCTCATTCAGCAGGGCTAGGCGGT +
Preference number: 6 (lower is better)
Translates to: HAAPQAPWAPVG*PPASHSAGLGG
Trigger: ACCGCCTAGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAGCTTGAGGAGCTGCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCTGCATGGGCAACCTGTGCCTCCAGGCTGCGCACCTaGGCAGTAAGGTGGCGGCAGGTCTGTTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SAWATCASRLRT*AVRWRQVCSAS
Trigger: GGAGGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGTGCGCAGCCTGGAGGCACAGGTTGCCCATGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TGCTGCCGGGTGGTGATGCCAGTGCCCTCGGCTATCTaGATTGGCTGCATGCTGGCTCGGCGCAGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: CCRVVMPVPSAI*IGCMLARRRVS
Trigger: AGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCACTGGCATCACCACCCGGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp GAGGCTGGTTCTCCAGGGACGCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTCAGAGGGTTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: EAGSPGTLVPSG*VRGSLLRGLLG
Trigger: CCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAACCAGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS CAA 90 bp ATGCGCGGAGAACGGCGGGTTCCACTGCGAGTGTTGGGGGAAGCCTaGGACAGGGCCTTCTTTGAGGCTCCCCGCCGCAGAAGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: MRGERRVPLRVLGEA*DRAFFEAPRRRRLF
Trigger: GAACAGCCTTCTGCGGCGGGGAGCCTCAAAGAAGGCCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTTCTCCGCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp CATAGCCTGCAGCGCTGCCTGTGTGCTGCAGAACTGGCGTCCCTGTaGCTCTTCCAGCCACTCGGGCTGTCTGTCTCCTGCCCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: HSLQRCLCAAELASL*LFQPLGLSVSCPRR
Trigger: CCTGCGAGGGCAGGAGACAGACAGCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp CCGGGCCACCTGGGCCTTCCACTCATCTTCAGCCTTGCTGTGGTCTaGTACCTTGGTGCGGAAGGCAGCCAACTCCCGTTGGGCCGAGGC +
Preference number: 6 (lower is better)
Translates to: PGHLGLPLIFSLAVV*YLGAEGSQLPLGRG
Trigger: GCCTCGGCCCAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAGGTGGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp GCTCTAGGGAGACCCGTTTGCGCTGCTGCCGGGTGGTaGTGCCAGTGCCCTCGGCTATCTGGATTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: ALGRPVCAAAGW*CQCPRLSGLAA
Trigger: TGCAGCCAATCCAGATAGCCGAGGGCACTGGCATCACCACCCGGCAGCAGCGCAAACGGGTCTCCCTAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GTGGTGATGCCAGTGCCCTCGGCTATCTGGATTGGCTaGATGCTGGCTCGGCGCAGGGTCTCTTGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: VVMPVPSAIWIG*MLARRRVSWGS
Trigger: AGACCCCCAAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCCAGATAGCCGAGGGCACTGGCATCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp AGCGCTGCCTGTGTGCTGCAGAACTGGCGTCCCTGTTaGTCTTCCAGCCACTCGGGCTGTCTGTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: SAACVLQNWRPC*SSSHSGCLSPA
Trigger: GGCAGGAGACAGACAGCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CATCTGCTCTGCCTCCCGCTCCATAGCCTGCAGCGCTaGCTGTGTGCTGCAGAACTGGCGTCCCTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: HLLCLPLHSLQR*LCAAELASLLL
Trigger: GAGCAACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTATGGAGCGGGAGGCAGAGCAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CTCGTTGAGGGCGTTCTGCAGCCGCATCTCAAGCTCTaGTCTGGCCGCCTTCTCCAGGGCAAGGTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: LVEGVLQPHLKL*SGRLLQGKVSL
Trigger: CAGGCTGACCTTGCCCTGGAGAAGGCGGCCAGAGCAGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GCTCTGCACCTCCTCCCGCAGAGCAGAGCTGCGTTCTaGAGCTCTGGCACTGTTGCTGGCTGTCTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: ALHLLPQSRAAF*SSGTVAGCLCL
Trigger: CAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCTCTGCGGGAGGAGGTGCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp ACCTCCAGCTCCCGGGCAGTGCTCTGTGCTTCTCGCTaGACCTCAGCCAGACGGGTCTCAGCATCAGCACGT +
Preference number: 6 (lower is better)
Translates to: TSSSRAVLCASR*TSARRVSASAR
Trigger: ACGTGCTGATGCTGAGACCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp AGTCACTCCAATGCGCCTGGCTGCGCGCTCCCGCTCTaGCTCGCGATTCTCCGGAATCGTACCTCTTCGTGG +
Preference number: 6 (lower is better)
Translates to: SHSNAPGCALPL*LAILRNRTSSW
Trigger: CCACGAAGAGGTACGATTCCGGAGAATCGCGAGGCAGAGCGGGAGCGCGCAGCCAGGCGCATTGGAGTGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546131.1
CDS GCA 72 bp AGCTCCTCCGCACGCTCAGCCTGTGAGGTCAGCTCCTaGCGCAGGTTCTCTGAAGCCACCCGCTGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSSARSACEVSS*RRFSEATRCFS
Trigger: GGAGAAACAGCGGGTGGCTTCAGAGAACCTGCGGCAGGAGCTGACCTCACAGGCTGAGCGTGCGGAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616538.4
CDS CCA 72 bp GAGGCTGGTTCTCCAGGGACGCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTGGTGATACTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: EAGSPGTLVPSG*VRGSLLVILSG
Trigger: CCCACTCAGTATCACCAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAACCAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp GAGCAGAGCTGCGTTCTGCAGCTCTGGCACTGTTGCTaGCTGTCTCTGCCTGCAGCAGGCGCAGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: EQSCVLQLWHCC*LSLPAAGAASP
Trigger: AGGAGAGGCTGCGCCTGCTGCAGGCAGAGACAGCCAGCAACAGTGCCAGAGCTGCAGAACGCAGCTCTGCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000620566.4
CDS CAA 72 bp CAGCGCTGCCTGTGTGCTGCAGAACTGGCGTCCCTGTaGCTCTTCCAGCCACTCGGGCTGTCTGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: QRCLCAAELASL*LFQPLGLSVSC
Trigger: GCAGGAGACAGACAGCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp CTGCGCACCTGGGCAGTAAGGTGGCGGCAGGTCTGTTCAGCCTCCTaGGTCTTCAGCCCAGCCTGCTGTAGCTCATGGCCCAGCCGTTCA +
Preference number: 6 (lower is better)
Translates to: LRTWAVRWRQVCSAS*VFSPACCSSWPSRS
Trigger: TGAACGGCTGGGCCATGAGCTACAGCAGGCTGGGCTGAAGACCAAGGAGGCTGAACAGACCTGCCGCCACCTTACTGCCCAGGTGCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp TCTTGCCGGCCCCGGGCCACCTGGGCCTTCCACTCATCTTCAGCCTaGCTGTGGTCTTGTACCTTGGTGCGGAAGGCAGCCAACTCCCGT +
Preference number: 6 (lower is better)
Translates to: SCRPRATWAFHSSSA*LWSCTLVRKAANSR
Trigger: ACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCGGCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp TCTGGCCCTGGAGTACAGGCCTGCGCTGTCCTGTGCTGCGTGCTATaGTCGGCTGTGGAATGGCCGCCAAAATCCCAGCTGTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SGPGVQACAVLCCVL*SAVEWPPKSQLCCQ
Trigger: CTGGCAGCACAGCTGGGATTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTGTACTCCAGGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS TCA 72 bp GCAGCCAACTCCCGTTGGGCCGAGGCTAAGGCACTCTaGCTGTGCCCTAGCTCCTGGGCCTTCTCCTCTAAC +
Preference number: 6 (lower is better)
Translates to: AANSRWAEAKAL*LCPSSWAFSSN
Trigger: GTTAGAGGAGAAGGCCCAGGAGCTAGGGCACAGTCAGAGTGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TCGAAGTGGCCCCGCTCAGCAAGCAGCTTGGCTTCCTaGTGGCCTCGCTCAGTCTCCAGCATCTCTACCCTG +
Preference number: 6 (lower is better)
Translates to: SKWPRSASSLAS*WPRSVSSISTL
Trigger: CAGGGTAGAGATGCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GTAGCGAACTCCACACGCTGCTCGTTGAGGGCGTTCTaGAGCCGCATCTCAAGCTCTGCTCTGGCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: VANSTRCSLRAF*SRISSSALAAF
Trigger: GAAGGCGGCCAGAGCAGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GCCAGTGCCTCTTGCAGGGTAGCGAACTCCACACGCTaGTCGTTGAGGGCGTTCTGCAGCCGCATCTCAAGC +
Preference number: 6 (lower is better)
Translates to: ASASCRVANSTR*SLRAFCSRISS
Trigger: GCTTGAGATGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGCTACCCTGCAAGAGGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp AGCTCCTCCGCACGCTCAGCCTGTGAGGTCAGCTCCTaGCGCAGGTTCTCTGAAGCCACCCGCTGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: SSSARSACEVSS*RRFSEATRCFS
Trigger: TGAGAAACAGCGGGTGGCTTCAGAGAACCTGCGGCAGGAGCTGACCTCACAGGCTGAGCGTGCGGAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000620566.4
CDS GCA 72 bp CAGGCCATGCGCCTTCTTCAGCATGCTCAGCTGCTCTaGATAGCTGGCCTTCTCTGCCCGCAGCTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: QAMRLLQHAQLL*IAGLLCPQLLS
Trigger: GCTCAGCAGCTGCGGGCAGAGAAGGCCAGCTATGCAGAGCAGCTGAGCATGCTGAAGAAGGCGCATGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CATACTTGGCAGTCATCACCTCCAGCTCCCGGGCAGTaGTCTGTGCTTCTCGCTGCACCTCAGCCAGACGGG +
Preference number: 6 (lower is better)
Translates to: HTWQSSPPAPGQ*SVLLAAPQPDG
Trigger: CCCGTCTGGCTGAGGTGCAGCGAGAAGCACAGAGCACTGCCCGGGAGCTGGAGGTGATGACTGCCAAGTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GCCCTGGAGTACAGGCCTGCGCTGTCCTGTGCTGCGTaGTATTGTCGGCTGTGGAATGGCCGCCAAAATCCC +
Preference number: 6 (lower is better)
Translates to: ALEYRPALSCAA*YCRLWNGRQNP
Trigger: GGGATTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTGTACTCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS GCA 72 bp GATTCTGGCCCTGGAGTACAGGCCTGCGCTGTCCTGTaGTGCGTGCTATTGTCGGCTGTGGAATGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: DSGPGVQACAVL*CVLLSAVEWPP
Trigger: TGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTGTACTCCAGGGCCAGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CCA 72 bp TGGCTGGGTACGAGGCAGCTTGCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCTCAGATCCAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: WLGTRQLAGDTE*GPLLAAQIQAV
Trigger: GACAGCCTGGATCTGAGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGCAAGCTGCCTCGTACCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp AGGCCTGGACTCCAGGGGATAGCAGGTCTTCAGATGTaGGGGGCACACTCGATTGCGCTGCTGCAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: RPGLQGIAGLQM*GAHSIALLQLC
Trigger: GCAGAGCTGCAGCAGCGCAATCGAGTGTGCCCCCCACATCTGAAGACCTGCTATCCCCTGGAGTCCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CAATGCGCGGAGAACGGCGGGTTCCACTGCGAGTGTTaGGGGAAGCCTTGGACAGGGCCTTCTTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: QCAENGGFHCEC*GKPWTGPSLRL
Trigger: GAGCCTCAAAGAAGGCCCTGTCCAAGGCTTCCCCCAACACTCGCAGTGGAACCCGCCGTTCTCCGCGCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TGGTGGCGGAGGCCCTGGGAGGCCTGTTCTTGCTGTTaGAGGGTCTGTGCTAGCTGGGCCTGCTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: WWRRPWEACSCC*RVCASWACFSL
Trigger: CAAAGAGAAGCAGGCCCAGCTAGCACAGACCCTCCAACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCTCGCTCCTCTGCAGCAGTGGCCAGTTGCTGGGCATaGTCCTGCCTAGTTGCCTCCTGCTTCTCCGCTACC +
Preference number: 6 (lower is better)
Translates to: SRSSAAVASCWA*SCLVASCFSAT
Trigger: GGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCAGAGGAGCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCCATAGCCTGCAGCGCTGCCTGTGTGCTGCAGAACTaGCGTCCCTGTTGCTCTTCCAGCCACTCGGGCTGT +
Preference number: 6 (lower is better)
Translates to: SIACSAACVLQN*RPCCSSSHSGC
Trigger: ACAGCCCGAGTGGCTGGAAGAGCAACAGGGACGCCAGTTCTGCAGCACACAGGCAGCGCTGCAGGCTATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp GAGGCTGGTTCTCCAGGGACGCTGGTGCCGTCTGGCTaGGTACGAGGCAGCTTGCTAGACTCATCATGGCAC +
Preference number: 6 (lower is better)
Translates to: EAGSPGTLVPSG*VRGSLLDSSWH
Trigger: GTGCCATGATGAGTCTAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAACCAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541262.5
CDS CAA 90 bp GCCTTCTTTGAGGCTCCCCGCCGCAGAAGGCTGTTCCCTAGCTTCTaGGGTGTGTTGAGGATGCTGAAGGCCATCGACTGGCGCCGGTCA +
Preference number: 6 (lower is better)
Translates to: AFFEAPRRRRLFPSF*GVLRMLKAIDWRRS
Trigger: TGACCGGCGCCAGTCGATGGCCTTCAGCATCCTCAACACACCCAAGAAGCTAGGGAACAGCCTTCTGCGGCGGGGAGCCTCAAAGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp TCCAGGGCATCTGCAGCCCTGCGCTTCTCCTCTTCAAGGCTGCCCTaGGTGACCTTCAAGGACTCTTTGAGGGCCTGGAGCTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRASAALRFSSSRLP*VTFKDSLRAWSCSW
Trigger: CCAGGAGCAGCTCCAGGCCCTCAAAGAGTCCTTGAAGGTCACCAAGGGCAGCCTTGAAGAGGAGAAGCGCAGGGCTGCAGATGCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TCCTCTGCAGCAGTGGCCAGTTGCTGGGCATGGTCCTaGCTAGTTGCCTCCTGCTTCTCCGCTACCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSAAVASCWAWS*LVASCFSATSF
Trigger: GAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGCCACTGCTGCAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CGGGTCTCTGCCTTCAGCTCAGAGATACAACGCTGCTaGTCTTCCAGGGCATCTGCAGCCCTGCGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RVSAFSSEIQRC*SSRASAALRFS
Trigger: GGAGAAGCGCAGGGCTGCAGATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGAGCTGAAGGCAGAGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CCGGCTTATCTGGAGCTCGCTGTGGGATTCTATGCCTaGCACCTTCTCCTTTGCCTCCTGCAGCTCCTGGCG +
Preference number: 6 (lower is better)
Translates to: PAYLELAVGFYA*HLLLCLLQLLA
Trigger: CGCCAGGAGCTGCAGGAGGCAAAGGAGAAGGTGGCAGGCATAGAATCCCACAGCGAGCTCCAGATAAGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TCACTCACCAGGGCCTGTGTGCTGGTGTGCTCGAGCTaGAGGGTGGAGAGGGCCTGCTCTTTCTGGAAGAAC +
Preference number: 6 (lower is better)
Translates to: SLTRACVLVCSS*RVERACSFWKN
Trigger: GTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCTGCAGCTCGAGCACACCAGCACACAGGCCCTGGTGAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CTCAGCCAGACGGGTCTCAGCATCAGCACGTACGGCTaGCAACTCTTGGACATACTTCTCCCGGGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: LSQTGLSISTYG*QLLDILLPGLV
Trigger: GACCAGGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGATGCTGAGACCCGTCTGGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TCTGGCCCTGGAGTACAGGCCTGCGCTGTCCTGTGCTaGGTGCTATTGTCGGCTGTGGAATGGCCGCCAAAA +
Preference number: 6 (lower is better)
Translates to: SGPGVQACAVLC*VLLSAVEWPPK
Trigger: TTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGGCCTGTACTCCAGGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CCA 72 bp GCGCCCTTCATGTCGGTCTCGGGGAGTCATGGGGCGTaGGAAACAGCTGGTGGCCTTCTTAGACTCAGGAGT +
Preference number: 6 (lower is better)
Translates to: APFMSVSGSHGA*ETAGGLLRLRS
Trigger: ACTCCTGAGTCTAAGAAGGCCACCAGCTGTTTCCCACGCCCCATGACTCCCCGAGACCGACATGAAGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTCTGCTTCAGGCTACTGCTTAGCTGCTCCACCTGGTaGCGGAGGCCCTGGGAGGCCTGTTCTTGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: FCFRLLLSCSTW*RRPWEACSCCW
Trigger: CCAACAGCAAGAACAGGCCTCCCAGGGCCTCCGCCACCAGGTGGAGCAGCTAAGCAGTAGCCTGAAGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCATGCTGTTCCTGGCGGGCTGTCTCAACACAGGCCTaGAGTTCCTCCACCTTCCGGCTCAGCTCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: SCCSWRAVSTQA*SSSTFRLSSAF
Trigger: GAAGGCAGAGCTGAGCCGGAAGGTGGAGGAACTCCAGGCCTGTGTTGAGACAGCCCGCCAGGAACAGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTTTTCCTCTCAGCCTCTTGCCGGCCCCGGGCCACCTaGGCCTTCCACTCATCTTCAGCCTTGCTGTGGTCT +
Preference number: 6 (lower is better)
Translates to: FFLSASCRPRAT*AFHSSSALLWS
Trigger: AGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp ACCCTGCCCCCTTCACAAACAGTTCACAACAGGAGCTaGCGGAGGCAAGCTGCAGCCGGGCTCATGCACCAA +
Preference number: 6 (lower is better)
Translates to: TLPPSQTVHNRS*RRQAAAGLMHQ
Trigger: TTGGTGCATGAGCCCGGCTGCAGCTTGCCTCCGCCAGCTCCTGTTGTGAACTGTTTGTGAAGGGGGCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540588.1
CDS CCA 72 bp CCTGCGCTGTCCTGTGCTGCGTGCTATTGTCGGCTGTaGAATGGCCGCCAAAATCCCAGCTGTGCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: PALSCAACYCRL*NGRQNPSCAAR
Trigger: TCTGGCAGCACAGCTGGGATTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CAA 72 bp GCCTTGCGCACCAAGGTCTCCAAGCGGGCCACCTCTTaGCTGGTGGCAGCCATCTTTTCCTGCAGAGTGGAG +
Preference number: 6 (lower is better)
Translates to: ALRTKVSKRATS*LVAAIFSCRVE
Trigger: CTCCACTCTGCAGGAAAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCTTGGAGACCTTGGTGCGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp GCCTCTTGCAGGGTAGCGAACTCCACACGCTGCTCGTaGAGGGCGTTCTGCAGCCGCATCTCAAGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: ASCRVANSTRCS*RAFCSRISSSA
Trigger: AGCAGAGCTTGAGATGCGGCTGCAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGCTACCCTGCAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp CGCATGGTAAGGCTCTCATTCTTGTCACGCAGCTCCTCAAGCTCCTaGGGCTCCAGTGGGCTGGCCGCCTGCTTCTCATTCAGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RMVRLSFLSRSSSSS*GSSGLAACFSFSRA
Trigger: AGCCCTGCTGAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAGCTTGAGGAGCTGCGTGACAAGAATGAGAGCCTTACCATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp CTGGTCCTTGCCTTCCTTTTCCGTCAGGGCATGAGCCAGTGCCTCTaGCAGGGTAGCGAACTCCACACGCTGCTCGTTGAGGGCGTTCTG +
Preference number: 6 (lower is better)
Translates to: LVLAFLFRQGMSQCL*QGSELHTLLVEGVL
Trigger: CAGAACGCCCTCAACGAGCAGCGTGTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAAGGAAGGCAAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp ACCTGGGCCTTCCACTCATCTTCAGCCTTGCTGTGGTCTTGTACCTaGGTGCGGAAGGCAGCCAACTCCCGTTGGGCCGAGGCTAAGGCA +
Preference number: 6 (lower is better)
Translates to: TWAFHSSSALLWSCT*VRKAANSRWAEAKA
Trigger: TGCCTTAGCCTCGGCCCAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp CTCCTCCTCCAAGCTGCTGATGAGGCTATTTTTCCTCTCAGCCTCTaGCCGGCCCCGGGCCACCTGGGCCTTCCACTCATCTTCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LLLQAADEAIFPLSL*PAPGHLGLPLIFSL
Trigger: AAGGCTGAAGATGAGTGGAAGGCCCAGGTGGCCCGGGGCCGGCAAGAGGCTGAGAGGAAAAATAGCCTCATCAGCAGCTTGGAGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp GAGGTCTGGGCACTGTCCCGGGCTTCATTAGCCACCTaGAGTTGCTGCTGCAGAATCTCCAGCTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: EVWALSRASLAT*SCCCRISSLAA
Trigger: GGCTGCCAAGCTGGAGATTCTGCAGCAGCAACTTCAGGTGGCTAATGAAGCCCGGGACAGTGCCCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GCCAGTTGCTGGGCATGGTCCTGCCTAGTTGCCTCCTaGTTCTCCGCTACCTCCTTCAACTGCTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: ASCWAWSCLVAS*FSATSFNCCSF
Trigger: GAAGGAGCAGCAGTTGAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp AGCAGTGGCCAGTTGCTGGGCATGGTCCTGCCTAGTTaGCTCCTGCTTCTCCGCTACCTCCTTCAACTGCTG +
Preference number: 6 (lower is better)
Translates to: SSGQLLGMVLPS*LLLLRYLLQLL
Trigger: CAGCAGTTGAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAGGCAGGACCATGCCCAGCAACTGGCCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CTTCGGGTCTCTGCCTTCAGCTCAGAGATACAACGCTaGTGCTCTTCCAGGGCATCTGCAGCCCTGCGCTTC +
Preference number: 6 (lower is better)
Translates to: LRVSAFSSEIQR*CSSRASAALRF
Trigger: GAAGCGCAGGGCTGCAGATGCCCTGGAAGAGCAGCAGCGTTGTATCTCTGAGCTGAAGGCAGAGACCCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CCTTGCGCACCAAGGTCTCCAAGCGGGCCACCTCTTTaGTGGTGGCAGCCATCTTTTCCTGCAGAGTGGAGA +
Preference number: 6 (lower is better)
Translates to: PCAPRSPSGPPL*WWQPSFPAEWR
Trigger: TCTCCACTCTGCAGGAAAAGATGGCTGCCACCAGCAAAGAGGTGGCCCGCTTGGAGACCTTGGTGCGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GTCCTTGCCTTCCTTTTCCGTCAGGGCATGAGCCAGTaGCTCTTGCAGGGTAGCGAACTCCACACGCTGCTC +
Preference number: 6 (lower is better)
Translates to: VLAFLFRQGMSQ*LLQGSELHTLL
Trigger: GAGCAGCGTGTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAAGGAAGGCAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CCTCCAGACCACGAAGCTTGGCCAACTCCTGGTCCTTaGCTTCCTTTTCCGTCAGGGCATGAGCCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: PPDHEAWPTPGP*LPFPSGHEPVP
Trigger: AGGCACTGGCTCATGCCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTTGGCCAAGCTTCGTGGTCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp GGCTCTCATTCTTGTCACGCAGCTCCTCAAGCTCCTTaGGCTCCAGTGGGCTGGCCGCCTGCTTCTCATTCA +
Preference number: 6 (lower is better)
Translates to: GSHSCHAAPQAP*APVGWPPASHS
Trigger: TGAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAGCTTGAGGAGCTGCGTGACAAGAATGAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCCACTCATCTTCAGCCTTGCTGTGGTCTTGTACCTTaGTGCGGAAGGCAGCCAACTCCCGTTGGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: STHLQPCCGLVP*CGRQPTPVGPR
Trigger: CCTCGGCCCAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp GCCACCTGGGCCTTCCACTCATCTTCAGCCTTGCTGTaGTCTTGTACCTTGGTGCGGAAGGCAGCCAACTCC +
Preference number: 6 (lower is better)
Translates to: ATWAFHSSSALL*SCTLVRKAANS
Trigger: GGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp ACGGCTGCCAACTCTTGGACATACTTCTCCCGGGCCTaGTCCAACTCCACTTCCAGAAACTGCCGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: TAANSWTYFSRA*SNSTSRNCRPR
Trigger: CCTTGGCCGGCAGTTTCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CGGGTCTCAGCATCAGCACGTACGGCTGCCAACTCTTaGACATACTTCTCCCGGGCCTGGTCCAACTCCACT +
Preference number: 6 (lower is better)
Translates to: RVSASARTAANS*TYFSRAWSNST
Trigger: AGTGGAGTTGGACCAGGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGATGCTGAGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CTCTGCCTCGCGATTCTCCGGAATCGTACCTCTTCGTaGGCTCGCGCCAGCGCTGTGAGCGCACAATTAGTT +
Preference number: 6 (lower is better)
Translates to: LCLAILRNRTSS*ARASAVSAQLV
Trigger: AACTAATTGTGCGCTCACAGCGCTGGCGCGAGCCCACGAAGAGGTACGATTCCGGAGAATCGCGAGGCAGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000541641.5
ENST00000543450.1
ENST00000613205.4
CDS CAA 72 bp AGGCTCTCATTCTTGTCACGCAGCTCCTCAAGCTCCTaGGGCTCCAGTGGGCTGGCCGCCTGCTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: RLSFLSRSSSSS*GSSGLAACFSF
Trigger: GAATGAGAAGCAGGCGGCCAGCCCACTGGAGCCCAAGGAGCTTGAGGAGCTGCGTGACAAGAATGAGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp GGAGCTGCTTTCTTCTGGGCCTCAGTAGTGCTCTGTTaGCGCCCTTCATGTCGGTCTCGGGGAGTCATGGGG +
Preference number: 6 (lower is better)
Translates to: GAAFFWASVVLC*RPSCRSRGVMG
Trigger: CCCCATGACTCCCCGAGACCGACATGAAGGGCGCAAACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp CTGTTCCTGGAACATGGCGCCATACTGTGCCTCCTCTaGCTGGCTATCCTCATACCGCTCACGCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LFLEHGAILCLL*LAILIPLTPGS
Trigger: GCTGCCTGGCGTGAGCGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATGTTCCAGGAACAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp GCCTTCCTTTTCCGTCAGGGCATGAGCCAGTGCCTCTaGCAGGGTAGCGAACTCCACACGCTGCTCGTTGAG +
Preference number: 6 (lower is better)
Translates to: AFLFRQGMSQCL*QGSELHTLLVE
Trigger: CTCAACGAGCAGCGTGTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAAGGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp ACGGGTCTCAGCATCAGCACGTACGGCTGCCAACTCTaGGACATACTTCTCCCGGGCCTGGTCCAACTCCAC +
Preference number: 6 (lower is better)
Translates to: TGLSISTYGCQL*DILLPGLVQLH
Trigger: GTGGAGTTGGACCAGGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGATGCTGAGACCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp GGGACGCTGGTGCCGTCTGGCTGGGTACGAGGCAGCTaGCTCAGAGGGTTGTTGGGGGACAAATCAGGTATA +
Preference number: 6 (lower is better)
Translates to: GTLVPSGWVRGS*LRGLLGDKSGI
Trigger: TATACCTGATTTGTCCCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS CAA 90 bp GCCTGGGGCTCACGGCTCTTTAAAGCATCAGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGCTGGTCTGCATGGGCAACCTGTGCC +
Preference number: 6 (lower is better)
Translates to: AWGSRLFKASVATWN*PRSRSCWSAWATCA
Trigger: GGCACAGGTTGCCCATGCAGACCAGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGAGCCGTGAGCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp AGCTGCTGCTTTTCTTCTTCGAAGTGGCCCCGCTCAGCAAGCAGCTaGGCTTCCTGCTGGCCTCGCTCAGTCTCCAGCATCTCTACCCTG +
Preference number: 6 (lower is better)
Translates to: SCCFSSSKWPRSASS*ASCWPRSVSSISTL
Trigger: CAGGGTAGAGATGCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAAGCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp TCTTGCTGGCTATCCTCATACCGCTCACGCCAGGCAGCTACTTCTTaGACGAGCTGCTCACACTCACTCTCAGCTGTGTGCTGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SCWLSSYRSRQAATS*TSCSHSLSAVCWAA
Trigger: GGCTGCCCAGCACACAGCTGAGAGTGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCTGGCGTGAGCGGTATGAGGATAGCCAGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp CTCAGCCAGACGGGTCTCAGCATCAGCACGTACGGCTGCCAACTCTaGGACATACTTCTCCCGGGCCTGGTCCAACTCCACTTCCAGAAA +
Preference number: 6 (lower is better)
Translates to: LSQTGLSISTYGCQL*DILLPGLVQLHFQK
Trigger: TTTCTGGAAGTGGAGTTGGACCAGGCCCGGGAGAAGTATGTCCAAGAGTTGGCAGCCGTACGTGCTGATGCTGAGACCCGTCTGGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp CCTGAGTGGCCTTGCTGTGCTCCTCCGTCAGCTCATTaGGGGCATCCTGTAGCTGCTGCAGATGACTGGCAA +
Preference number: 6 (lower is better)
Translates to: PEWPCCAPPSAH*GHPVAAADDWQ
Trigger: TTGCCAGTCATCTGCAGCAGCTACAGGATGCCCTCAATGAGCTGACGGAGGAGCACAGCAAGGCCACTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp CCCACGGCCTCACGCAGAAATGGTGAAGCCCTCTCCTaGGCTGTCTCTACAGCTCAACGTGCAGGCAAACAC +
Preference number: 6 (lower is better)
Translates to: PTASRRNGEALS*AVSTAQRAGKH
Trigger: GTGTTTGCCTGCACGTTGAGCTGTAGAGACAGCTCAGGAGAGGGCTTCACCATTTCTGCGTGAGGCCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535947.5
CDS TCA 72 bp TCACTCCAATGCGCCCACGGCCTCACGCAGAAATGGTaGAGCCCTCTCCTGAGCTGTCTCTACAGCTCAACG +
Preference number: 6 (lower is better)
Translates to: SLQCAHGLTQKW*SPLLSCLYSST
Trigger: CGTTGAGCTGTAGAGACAGCTCAGGAGAGGGCTTCACCATTTCTGCGTGAGGCCGTGGGCGCATTGGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535947.5
CDS GCA 72 bp TGTTCTTGCTGTTGGAGGGTCTGTGCTAGCTGGGCCTaGTTCTCTTTGGCCTGCTGCTTCAGGCCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: CSCCWRVCASWA*FSLACCFRPAS
Trigger: ACTGGCTGGCCTGAAGCAGCAGGCCAAAGAGAAGCAGGCCCAGCTAGCACAGACCCTCCAACAGCAAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TGTTCCTGGAACATGGCGCCATACTGTGCCTCCTCTTaGTGGCTATCCTCATACCGCTCACGCCAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: CSWNMAPYCASS*WLSSYRSRQAA
Trigger: AGCTGCCTGGCGTGAGCGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATGTTCCAGGAACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CTGGCCAGGTTGGCATGGAGCTCAGCTAGTTCGTTCTaGTGCCGGCTTATCTGGAGCTCGCTGTGGGATTCT +
Preference number: 6 (lower is better)
Translates to: LARLAWSSASSF*CRLIWSSLWDS
Trigger: AGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGAGCTCCATGCCAACCTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp ACTCATCTTCAGCCTTGCTGTGGTCTTGTACCTTGGTaGGGAAGGCAGCCAACTCCCGTTGGGCCGAGGCTA +
Preference number: 6 (lower is better)
Translates to: THLQPCCGLVPW*GRQPTPVGPRL
Trigger: TAGCCTCGGCCCAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GTGGAGAGGGCCTGCTCTTTCTGGAAGAACTTCTCCTaGCACGCCTTCAATTCTTGGCCCAGCTCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: VERACSFWKNFS*HAFNSWPSSSA
Trigger: TGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp ACAAACAGTTCACAACAGGAGCTGGCGGAGGCAAGCTaGAGCCGGGCTCATGCACCAAGACTGGTCACCGTT +
Preference number: 6 (lower is better)
Translates to: TNSSQQELAEAS*SRAHAPRLVTV
Trigger: AACGGTGACCAGTCTTGGTGCATGAGCCCGGCTGCAGCTTGCCTCCGCCAGCTCCTGTTGTGAACTGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540588.1
CDS CCA 72 bp ACCTGCAAGACATCACCCAGCACCTCGCCCTTCTCCTaGGGTGGGTTATCCTGCAGCTGGGACAAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: TCKTSPSTSPFS*GGLSCSWDKCS
Trigger: AGAACACTTGTCCCAGCTGCAGGATAACCCACCCCAGGAGAAGGGCGAGGTGCTGGGTGATGTCTTGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351960.10
ENST00000613205.4
CDS CCA 72 bp AGCTGCAAGACATCACCCAGCACCTCGCCCTTCTCCTaGGGTGGGTTATCCTGCAGCTGGGACAAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: SCKTSPSTSPFS*GGLSCSWDKCS
Trigger: AGAACACTTGTCCCAGCTGCAGGATAACCCACCCCAGGAGAAGGGCGAGGTGCTGGGTGATGTCTTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CCTGCTGGCCTCGCTCAGTCTCCAGCATCTCTACCCTaGCTTGGAGCTGTGTGTTGTTTGCAGCAAGAGTGG +
Preference number: 6 (lower is better)
Translates to: PAGLAQSPASLP*LGAVCCLQQEW
Trigger: CCACTCTTGCTGCAAACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGGAGACTGAGCGAGGCCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTTCTTCTTCGAAGTGGCCCCGCTCAGCAAGCAGCTTaGCTTCCTGCTGGCCTCGCTCAGTCTCCAGCATCT +
Preference number: 6 (lower is better)
Translates to: FLLRSGPAQQAA*LPAGLAQSPAS
Trigger: AGATGCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCCTGGAACATGGCGCCATACTGTGCCTCCTCTTGCTaGCTATCCTCATACCGCTCACGCCAGGCAGCTACT +
Preference number: 6 (lower is better)
Translates to: SWNMAPYCASSC*LSSYRSRQAAT
Trigger: AGTAGCTGCCTGGCGTGAGCGGTATGAGGATAGCCAGCAAGAGGAGGCACAGTATGGCGCCATGTTCCAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCTTGGACCTGCTGGAGTGCTCTGGCCAGGTTGGCATaGAGCTCAGCTAGTTCGTTCTGCTGCCGGCTTATC +
Preference number: 6 (lower is better)
Translates to: SWTCWSALARLA*SSASSFCCRLI
Trigger: GATAAGCCGGCAGCAGAACGAACTAGCTGAGCTCCATGCCAACCTGGCCAGAGCACTCCAGCAGGTCCAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTCTGGAAGAACTTCTCCTGCCACGCCTTCAATTCTTaGCCCAGCTCCTCCGCACGCTCAGCCTGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: FWKNFSCHAFNS*PSSSARSACEV
Trigger: GACCTCACAGGCTGAGCGTGCGGAGGAGCTGGGCCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp GCTGTCCTGTGCTGCGTGCTATTGTCGGCTGTGGAATaGCCGCCAAAATCCCAGCTGTGCTGCCAGAACCTA +
Preference number: 6 (lower is better)
Translates to: AVLCCVLLSAVE*PPKSQLCCQNL
Trigger: TAGGTTCTGGCAGCACAGCTGGGATTTTGGCGGCCATTCCACAGCCGACAATAGCACGCAGCACAGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CAA 72 bp TTTTCTTCTTCGAAGTGGCCCCGCTCAGCAAGCAGCTaGGCTTCCTGCTGGCCTCGCTCAGTCTCCAGCATC +
Preference number: 6 (lower is better)
Translates to: FSSSKWPRSASS*ASCWPRSVSSI
Trigger: GATGCTGGAGACTGAGCGAGGCCAGCAGGAAGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp CTGGGCACTGTCCCGGGCTTCATTAGCCACCTGAAGTaGCTGCTGCAGAATCTCCAGCTTGGCAGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: LGTVPGFISHLK*LLQNLQLGSLL
Trigger: GAGAAGGCTGCCAAGCTGGAGATTCTGCAGCAGCAACTTCAGGTGGCTAATGAAGCCCGGGACAGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp TTCCACTCATCTTCAGCCTTGCTGTGGTCTTGTACCTaGGTGCGGAAGGCAGCCAACTCCCGTTGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: FHSSSALLWSCT*VRKAANSRWAE
Trigger: CTCGGCCCAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp CTGGGCCTTCCACTCATCTTCAGCCTTGCTGTGGTCTaGTACCTTGGTGCGGAAGGCAGCCAACTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: LGLPLIFSLAVV*YLGAEGSQLPL
Trigger: CAACGGGAGTTGGCTGCCTTCCGCACCAAGGTACAAGACCACAGCAAGGCTGAAGATGAGTGGAAGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp GGTTCTCCAGGGACGCTGGTGCCGTCTGGCTGGGTACGAGGCAGCTaGCTCAGAGGGTTGTTGGGGGACAAATCAGGTATAATTGTCATG +
Preference number: 6 (lower is better)
Translates to: GSPGTLVPSGWVRGS*LRGLLGDKSGIIVM
Trigger: CATGACAATTATACCTGATTTGTCCCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGTCCCTGGAGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS TCA 72 bp AACTCCTGGTCCTTGCCTTCCTTTTCCGTCAGGGCATaGGCCAGTGCCTCTTGCAGGGTAGCGAACTCCACA +
Preference number: 6 (lower is better)
Translates to: NSWSLPSFSVRA*ASASCRVANST
Trigger: TGTGGAGTTCGCTACCCTGCAAGAGGCACTGGCTCATGCCCTGACGGAAAAGGAAGGCAAGGACCAGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp GACTCAGCTTTGCACATGTGGTCAAGACTGTGGCTGTaGCCCCAGCAGAGGGTTACCTTGTCCTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: DSALHMWSRLWL*PQQRVTLSCRA
Trigger: AGCCCTGCAGGACAAGGTAACCCTCTGCTGGGGTCACAGCCACAGTCTTGACCACATGTGCAAAGCTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000536119.5
ENST00000540843.5
CDS GCA 72 bp CCGCCTGCTTCTCATTCAGCAGGGCTAGGCGGTCAATaGGCTGCTGCATCATGGCTATCTGTGCATCCTTCT +
Preference number: 6 (lower is better)
Translates to: PPASHSAGLGGQ*AAASWLSVHPS
Trigger: AGAAGGATGCACAGATAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCCTGCTGAATGAGAAGCAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CTGGCGCCGGTCAGCCTGTTTAGTAGAAGCTGGAGCTaGTTTCTTCTGGGCCTCAGTAGTGCTCTGTTTGCG +
Preference number: 6 (lower is better)
Translates to: LAPVSLFSRSWS*FLLGLSSALFA
Trigger: CGCAAACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAGGCTGACCGGCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GAGCTCTGCAGGTCAGTGATCAGGCTAGACAGCTGCTaGTTTTCTTCTTCGAAGTGGCCCCGCTCAGCAAGC +
Preference number: 6 (lower is better)
Translates to: ELCRSVIRLDSC*FSSSKWPRSAS
Trigger: GCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGATCACTGACCTGCAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TTCCCGCTTATGCTGCTCCACCAGGCTTCGGGTCTCTaGCTTCAGCTCAGAGATACAACGCTGCTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: FPLMLLHQASGL*LQLRDTTLLLF
Trigger: GAAGAGCAGCAGCGTTGTATCTCTGAGCTGAAGGCAGAGACCCGAAGCCTGGTGGAGCAGCATAAGCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GCCAGGTTGGCATGGAGCTCAGCTAGTTCGTTCTGCTaGCGGCTTATCTGGAGCTCGCTGTGGGATTCTATG +
Preference number: 6 (lower is better)
Translates to: ARLAWSSASSFC*RLIWSSLWDSM
Trigger: CATAGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGAGCTCCATGCCAACCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TTGTCGGCTGTGGAATGGCCGCCAAAATCCCAGCTGTaGTGCCAGAACCTAATCCCCTGTTCCGCTGAGCAT +
Preference number: 6 (lower is better)
Translates to: LSAVEWPPKSQL*CQNLIPCSAEH
Trigger: ATGCTCAGCGGAACAGGGGATTAGGTTCTGGCAGCACAGCTGGGATTTTGGCGGCCATTCCACAGCCGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543009.5
CDS CCA 72 bp TGGATTGGCTGCATGCTGGCTCGGCGCAGGGTCTCTTaGGGGTCTCCAGTTTTCATCTCCTCATCTGTGATG +
Preference number: 6 (lower is better)
Translates to: WIGCMLARRRVS*GSPVFISSSVM
Trigger: CATCACAGATGAGGAGATGAAAACTGGAGACCCCCAAGAGACCCTGCGCCGAGCCAGCATGCAGCCAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CATCGACTGGCGCCGGTCAGCCTGTTTAGTAGAAGCTaGAGCTGCTTTCTTCTGGGCCTCAGTAGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: HRLAPVSLFSRS*SCFLLGLSSAL
Trigger: CAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAGGCTGACCGGCGCCAGTCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp ATCAGGCTAGACAGCTGCTGCTTTTCTTCTTCGAAGTaGCCCCGCTCAGCAAGCAGCTTGGCTTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: IRLDSCCFSSSK*PRSASSLASCW
Trigger: CCAGCAGGAAGCCAAGCTGCTTGCTGAGCGGGGCCACTTCGAAGAAGAAAAGCAGCAGCTGTCTAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp AGTTCGTTCTGCTGCCGGCTTATCTGGAGCTCGCTGTaGGATTCTATGCCTGCCACCTTCTCCTTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SSFCCRLIWSSL*DSMPATFSFAS
Trigger: GGAGGCAAAGGAGAAGGTGGCAGGCATAGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCAGAACGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TGGAGCTCAGCTAGTTCGTTCTGCTGCCGGCTTATCTaGAGCTCGCTGTGGGATTCTATGCCTGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: WSSASSFCCRLI*SSLWDSMPATF
Trigger: GAAGGTGGCAGGCATAGAATCCCACAGCGAGCTCCAGATAAGCCGGCAGCAGAACGAACTAGCTGAGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TGCTCGAGCTGCAGGGTGGAGAGGGCCTGCTCTTTCTaGAAGAACTTCTCCTGCCACGCCTTCAATTCTTGG +
Preference number: 6 (lower is better)
Translates to: CSSCRVERACSF*KNFSCHAFNSW
Trigger: CCAAGAATTGAAGGCGTGGCAGGAGAAGTTCTTCCAGAAAGAGCAGGCCCTCTCCACCCTGCAGCTCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp ACTCTTTCTGGGGGTCTTCTGGAGATGGGACTGCAATaGCTCCTCAGCTGCAGTTTCCTCCTGGTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: TLSGGLLEMGLQ*LLSCSFLLVEA
Trigger: GGCTTCCACCAGGAGGAAACTGCAGCTGAGGAGCCATTGCAGTCCCATCTCCAGAAGACCCCCAGAAAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535111.5
ENST00000543450.1
CDS CCA 72 bp AACTGTGTGGTGGGTGGGAAGAGGGGACTTGAGGCATaGGGTTCTTCTGGAAAAGATGGCACTCTGCCACCC +
Preference number: 6 (lower is better)
Translates to: NCVVGGKRGLEA*GSSGKDGTLPP
Trigger: GGGTGGCAGAGTGCCATCTTTTCCAGAAGAACCCCATGCCTCAAGTCCCCTCTTCCCACCCACCACACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS CCA 72 bp CAGTCACTCCAATGCGCAGTGGCCTGCCTGACAAACTaGGATCAACCGGACACTCCCCCTTCGCTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: QSLQCAVACLTN*DQPDTPPSLCF
Trigger: AAAACAGAGCGAAGGGGGAGTGTCCGGTTGATCCCAGTTTGTCAGGCAGGCCACTGCGCATTGGAGTGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544238.5
CDS CAA 90 bp GAAGAGGAGGCAACCTTCTGTAGCTCTAGGAAGCGAATCTCCCTCTaGGCCTGGTGGCTAGGTGGGGAGAGCTCTTCAGGGAATGTGCTA +
Preference number: 6 (lower is better)
Translates to: EEEATFCSSRKRISL*AWWLGGESSSGNVL
Trigger: TAGCACATTCCCTGAAGAGCTCTCCCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTTCCTAGAGCTACAGAAGGTTGCCTCCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000543937.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp CCTCGCTCAGTCTCCAGCATCTCTACCCTGGCTTGGAGCTGTGTGTaGTTTGCAGCAAGAGTGGCTGCCTCTTGCTTCAAGGTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: PRSVSSISTLAWSCV*FAARVAASCFKVSS
Trigger: GCTGGAAACCTTGAAGCAAGAGGCAGCCACTCTTGCTGCAAACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGGAGACTGAGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp GCTCCTGGAGCTGGTCCTTCTCCTGGGCCACCCTTTCTTTCTCAGTaGCTTTTTGCTGCTCAGACCGCAGCTGCAACTCTAGCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: APGAGPSPGPPFLSQ*LFAAQTAAATLALQ
Trigger: TTGCAGAGCTAGAGTTGCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAAAGAAAGGGTGGCCCAGGAGAAGGACCAGCTCCAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TTCTCATTCAGCAGGGCTAGGCGGTCAATGCGCTGCTaGATCATGGCTATCTGTGCATCCTTCTCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: FSFSRARRSMRC*IMAICASFSVR
Trigger: CCTCACCGAGAAGGATGCACAGATAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCCTGCTGAATGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TGCTTCTCATTCAGCAGGGCTAGGCGGTCAATGCGCTaGTGCATCATGGCTATCTGTGCATCCTTCTCGGTG +
Preference number: 6 (lower is better)
Translates to: CFSFSRARRSMR*CIMAICASFSV
Trigger: CACCGAGAAGGATGCACAGATAGCCATGATGCAGCAGCGCATTGACCGCCTAGCCCTGCTGAATGAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CTAGTTGCCTCCTGCTTCTCCGCTACCTCCTTCAACTaGTGCTCCTTCTGCTTCAGGCTACTGCTTAGCTGC +
Preference number: 6 (lower is better)
Translates to: LVASCFSATSFN*CSFCFRLLLSC
Trigger: GCAGCTAAGCAGTAGCCTGAAGCAGAAGGAGCAGCAGTTGAAGGAGGTAGCGGAGAAGCAGGAGGCAACTAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp TCTTTCTCAGTTGCTTTTTGCTGCTCAGACCGCAGCTaGAACTCTAGCTCTGCAACCTGGGCCTGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SFSVAFCCSDRS*NSSSATWAWAS
Trigger: TGAGGCCCAGGCCCAGGTTGCAGAGCTAGAGTTGCAGCTGCGGTCTGAGCAGCAAAAAGCAACTGAGAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp GCCCAGAAGAGCACAGTGGTAAACTGGACTCAGCTTTaGACATGTGGTCAAGACTGTGGCTGTGACCCCAGC +
Preference number: 6 (lower is better)
Translates to: AQKSTVVNWTQL*TCGQDCGCDPS
Trigger: GCTGGGGTCACAGCCACAGTCTTGACCACATGTGCAAAGCTGAGTCCAGTTTACCACTGTGCTCTTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000536119.5
ENST00000540843.5
CDS CCA 72 bp TGTAGCTCTAGGAAGCGAATCTCCCTCTTGGCCTGGTaGCTAGGTGGGGAGAGCTCTTCAGGGAATGTGCTA +
Preference number: 6 (lower is better)
Translates to: CSSRKRISLLAW*LGGESSSGNVL
Trigger: TAGCACATTCCCTGAAGAGCTCTCCCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTTCCTAGAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000543937.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTCTGTAGCTCTAGGAAGCGAATCTCCCTCTTGGCCTaGTGGCTAGGTGGGGAGAGCTCTTCAGGGAATGTG +
Preference number: 6 (lower is better)
Translates to: FCSSRKRISLLA*WLGGESSSGNV
Trigger: CACATTCCCTGAAGAGCTCTCCCCACCTAGCCACCAGGCCAAGAGGGAGATTCGCTTCCTAGAGCTACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000543937.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TGGGGCTCACGGCTCTTTAAAGCATCAGTTGCCACCTaGAATTTGCCCAGGTCTCGAAGCTGCTGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: WGSRLFKASVAT*NLPRSRSCWSA
Trigger: TGCAGACCAGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGAGCCGTGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CAGCTCAGATCCAGGCTGTCAATACTCAAGTCCAGCTaGGGCTTAGCCTGGGGCTCACGGCTCTTTAAAGCA +
Preference number: 6 (lower is better)
Translates to: QLRSRLSILKSS*GLAWGSRLFKA
Trigger: TGCTTTAAAGAGCCGTGAGCCCCAGGCTAAGCCCCAGCTGGACTTGAGTATTGACAGCCTGGATCTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTCTTGGGTGTGTTGAGGATGCTGAAGGCCATCGACTaGCGCCGGTCAGCCTGTTTAGTAGAAGCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: FLGVLRMLKAID*RRSACLVEAGA
Trigger: AGCTCCAGCTTCTACTAAACAGGCTGACCGGCGCCAGTCGATGGCCTTCAGCATCCTCAACACACCCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CCACCCACTCTTAGTGAGCTCAGCCTCACATTATCCTaGGCAACCCCAGCGTTCTGTGGATCAGACAGCAAG +
Preference number: 6 (lower is better)
Translates to: PPTLSELSLTLS*ATPAFCGSDSK
Trigger: CTTGCTGTCTGATCCACAGAACGCTGGGGTTGCCCAGGATAATGTGAGGCTGAGCTCACTAAGAGTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535087.5
ENST00000535838.5
CDS CAA 72 bp CTTCAGCCTCACCACCTGGGATTCATCTTGATTGATTaGGGTGTGTTGGTGGGCAGTGGCTGCCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: LQPHHLGFILID*GVLVGSGCHSL
Trigger: CAGGCTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGTGGTGAGGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535111.5
ENST00000543450.1
CDS CAA 72 bp GTCACTCCAATGCGCCTGGGATTCATCTTGATTGATTaGGGTGTGTTGGTGGGCAGTGGCTGCCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: VTPMRLGFILID*GVLVGSGCHSL
Trigger: CAGGCTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGCGCATTGGAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534987.5
CDS CAA 90 bp GCTCAGTCTCCAGCATCTCTACCCTGGCTTGGAGCTGTGTGTTGTTaGCAGCAAGAGTGGCTGCCTCTTGCTTCAAGGTTTCCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: AQSPASLPWLGAVCC*QQEWLPLASRFPAA
Trigger: TGCAGCTGGAAACCTTGAAGCAAGAGGCAGCCACTCTTGCTGCAAACAACACACAGCTCCAAGCCAGGGTAGAGATGCTGGAGACTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000537217.5
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS CAA 90 bp AATGCGCCAAACCATCTGCTTCAGCCTCACCACCTGGGATTCATCTaGATTGATTTGGGTGTGTTGGTGGGCAGTGGCTGCCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: NAPNHLLQPHHLGFI*IDLGVLVGSGCHSL
Trigger: CAGGCTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGTGGTGAGGCTGAAGCAGATGGTTTGGCGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535111.5
CDS CAA 90 bp GAGCTACCAAACCATCTGCTTCAGCCTCACCACCTGGGATTCATCTaGATTGATTTGGGTGTGTTGGTGGGCAGTGGCTGCCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: ELPNHLLQPHHLGFI*IDLGVLVGSGCHSL
Trigger: CAGGCTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGTGGTGAGGCTGAAGCAGATGGTTTGGTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS TCA 72 bp TATCCTCATACCGCTCACGCCAGGCAGCTACTTCTTTaGCGAGCTGCTCACACTCACTCTCAGCTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: YPHTAHARQLLL*RAAHTHSQLCA
Trigger: AGCACACAGCTGAGAGTGAGTGTGAGCAGCTCGTCAAAGAAGTAGCTGCCTGGCGTGAGCGGTATGAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000542977.5
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp TGGAAAGGGGCCGAGAGGAGACGGAGGCAGCACAGATaGACGGGAAGCTATATTACACCATCTGGAATGGCT +
Preference number: 6 (lower is better)
Translates to: WKGAERRRRQHR*TGSYITPSGMA
Trigger: AGCCATTCCAGATGGTGTAATATAGCTTCCCGTTCATCTGTGCTGCCTCCGTCTCCTCTCGGCCCCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS TCA 72 bp GACAGTCACTCCAATGCGCCTGGGATTCATCTTGATTaGTTTGGGTGTGTTGGTGGGCAGTGGCTGCCACAG +
Preference number: 6 (lower is better)
Translates to: DSHSNAPGIHLD*FGCVGGQWLPQ
Trigger: CTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGCGCATTGGAGTGACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534987.5
CDS GCA 72 bp TGCTTCTTCAGCCGTCTCATCTGGAACTGTGGGGTCTaGAGGATATCACCCATGGGAGAAGCTGGAGAACCT +
Preference number: 6 (lower is better)
Translates to: CFFSRLIWNCGV*RISPMGEAGEP
Trigger: AGGTTCTCCAGCTTCTCCCATGGGTGATATCCTGCAGACCCCACAGTTCCAGATGAGACGGCTGAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CACGGCTCTTTAAAGCATCAGTTGCCACCTGGAATTTaGCCAGGTCTCGAAGCTGCTGGTCTGCATGGGCAA +
Preference number: 6 (lower is better)
Translates to: HGSLKHQLPPGI*PGLEAAGLHGQ
Trigger: TTGCCCATGCAGACCAGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGAGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp CCAGCAGCCTCAGATTGGGCTCCTGAGCCAGATGCGTaGTCCTTTTCTTTCTTAGCCAGCTGTTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: PAASDWAPEPDA*SFSFLASCSFS
Trigger: ACTGAAGGAACAGCTGGCTAAGAAAGAAAAGGAGCACGCATCTGGCTCAGGAGCCCAATCTGAGGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTGCGATCCATCTGGCTCTTCTCTGTCTTCAGGTCCTaGCACTGCTTCAGGGTTTCATGCAGCCGCATGGTA +
Preference number: 6 (lower is better)
Translates to: LRSIWLFSVFRS*HCFRVSCSRMV
Trigger: TACCATGCGGCTGCATGAAACCCTGAAGCAGTGCCAGGACCTGAAGACAGAGAAGAGCCAGATGGATCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CCTGGACAGCCTTCAGCTTCTGCTGCTGCACCTTGCTaGCTTGGTCAGAGTCAGCCAGTTTCTTACTCAGTT +
Preference number: 6 (lower is better)
Translates to: PGQPSASAAAPC*LGQSQPVSYSV
Trigger: AACTGAGTAAGAAACTGGCTGACTCTGACCAAGCCAGCAAGGTGCAGCAGCAGAAGCTGAAGGCTGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTTTCCTGCAGAGTGGAGAGGTCATCTGCAAGCTTCTaGGCCCTGACTTCCTTCTCTTGGACCTGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: FSCRVERSSASF*ALTSFSWTCWS
Trigger: ACTCCAGCAGGTCCAAGAGAAGGAAGTCAGGGCCCAGAAGCTTGCAGATGACCTCTCCACTCTGCAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358965.10
ENST00000393695.8
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp GAACTCTTCCAACTCTTTCTGGGGGTCTTCTGGAGATaGGACTGCAATGGCTCCTCAGCTGCAGTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ELFQLFLGVFWR*DCNGSSAAVSS
Trigger: GGAGGAAACTGCAGCTGAGGAGCCATTGCAGTCCCATCTCCAGAAGACCCCCAGAAAGAGTTGGAAGAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535111.5
ENST00000543450.1
CDS CAA 72 bp TCACGGCTCTTTAAAGCATCAGTTGCCACCTGGAATTaGCCCAGGTCTCGAAGCTGCTGGTCTGCATGGGCA +
Preference number: 6 (lower is better)
Translates to: SRLFKASVATWN*PRSRSCWSAWA
Trigger: TGCCCATGCAGACCAGCAGCTTCGAGACCTGGGCAAATTCCAGGTGGCAACTGATGCTTTAAAGAGCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000546036.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp GCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: ASWWKPPHTRTG*SPAVWLRISFH
Trigger: GTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000366394.7
ENST00000393695.8
ENST00000535087.5
ENST00000537217.5
ENST00000537905.5
ENST00000540843.5
ENST00000613205.4
CDS GCA 72 bp TTTGGCTTTCTCCATCTGCAGCTTATAGTGCTCAGCTaGCTGCTCCTTCTGGCTCAACTGGGCTTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: FGFLHLQLIVLS*LLLLAQLGLQF
Trigger: GAACTGCAAGCCCAGTTGAGCCAGAAGGAGCAGGCAGCTGAGCACTATAAGCTGCAGATGGAGAAAGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCCCAGTCCCTGGGACTTTTGGAGCTCATGGTAGAGTaGTATAAGAGCAGCATGGTCATCTTCGCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: SQSLGLLELMVE*YKSSMVIFASS
Trigger: GGAACTGGCGAAGATGACCATGCTGCTCTTATACCACTCTACCATGAGCTCCAAAAGTCCCAGGGACTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534971.1
ENST00000534987.5
ENST00000535947.5
ENST00000536119.5
ENST00000537217.5
ENST00000537930.5
ENST00000540843.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CCTGAAGAACTCTTCCAACTCTTTCTGGGGGTCTTCTaGAGATGGGACTGCAATGGCTCCTCAGCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: PEELFQLFLGVF*RWDCNGSSAAV
Trigger: AACTGCAGCTGAGGAGCCATTGCAGTCCCATCTCCAGAAGACCCCCAGAAAGAGTTGGAAGAGTTCTTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535111.5
ENST00000543450.1
CDS CCA 72 bp AATTGTCATGAGTGCTTTATGTCTGGTGATACTGAGTaGGGTCCCCTCCTCGCAGCTCAGATCCAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: NCHECFMSGDTE*GPLLAAQIQAV
Trigger: GACAGCCTGGATCTGAGCTGCGAGGAGGGGACCCCACTCAGTATCACCAGACATAAAGCACTCATGACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS CAA 72 bp AACCATCTGCTTCAGCCTCACCACCTGGGATTCATCTaGATTGATTTGGGTGTGTTGGTGGGCAGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: NHLLQPHHLGFI*IDLGVLVGSGC
Trigger: GCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGTGGTGAGGCTGAAGCAGATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535111.5
ENST00000543450.1
CDS CAA 90 bp AACCATCTGCTTCAGCCTCACCACCTGGGATTCATCTTGATTGATTaGGGTGTGTTGGTGGGCAGTGGCTGCCACAGCCTGAAGAACTCT +
Preference number: 6 (lower is better)
Translates to: NHLLQPHHLGFILID*GVLVGSGCHSLKNS
Trigger: AGAGTTCTTCAGGCTGTGGCAGCCACTGCCCACCAACACACCCAAATCAATCAAGATGAATCCCAGGTGGTGAGGCTGAAGCAGATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535111.5
ENST00000543450.1
CDS CAA 90 bp CTGGTGCCGTCTGGCTGGGTACGAGGCAGCTTGCTCAGAGGGTTGTaGGGGGACAAATCAGGTATAATTGTCATGAGTGCTTTATGTCTG +
Preference number: 6 (lower is better)
Translates to: LVPSGWVRGSLLRGL*GDKSGIIVMSALCL
Trigger: CAGACATAAAGCACTCATGACAATTATACCTGATTTGTCCCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS CAA 90 bp ACGCTGGTGCCGTCTGGCTGGGTACGAGGCAGCTTGCTCAGAGGGTaGTTGGGGGACAAATCAGGTATAATTGTCATGAGTGCTTTATGT +
Preference number: 6 (lower is better)
Translates to: TLVPSGWVRGSLLRG*LGDKSGIIVMSALC
Trigger: ACATAAAGCACTCATGACAATTATACCTGATTTGTCCCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCCAGCCAGACGGCACCAGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS CAA 90 bp TCCCGCAGCTTAAAGGAAAGGTCTCCATTCTCCTCCGAAAGCTGGTaGATTTTGCGATCCATCTGGCTCTTCTCTGTCTTCAGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRSLKERSPFSSESW*ILRSIWLFSVFRSW
Trigger: CCAGGACCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAATGGAGACCTTTCCTTTAAGCTGCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp GACTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: DSWWKPPHTRTG*SPAVWLRISFH
Trigger: GTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358965.10
CDS TCA 72 bp GTCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: VSWWKPPHTRTG*SPAVWLRISFH
Trigger: GTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368959.9
ENST00000535838.5
ENST00000541719.5
ENST00000543937.5
CDS TCA 72 bp TCCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: SSWWKPPHTRTG*SPAVWLRISFH
Trigger: GTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534987.5
ENST00000535111.5
ENST00000543450.1
CDS TCA 72 bp TGGGTACGAGGCAGCTTGCTAGACTCATCATGGCACTaGCAGAGGAAGATGAGTGGTGACAAGCCAAGAACT +
Preference number: 6 (lower is better)
Translates to: WVRGSLLDSSWH*QRKMSGDKPRT
Trigger: AGTTCTTGGCTTGTCACCACTCATCTTCCTCTGTCAGTGCCATGATGAGTCTAGCAAGCTGCCTCGTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541262.5
CDS TCA 72 bp GGCCTGCTAGGTGGCATGGAGGCACAAGGGCTTACCTaGATTTTATATTCAAACTGTTCCCAGTCCCTGGGA +
Preference number: 6 (lower is better)
Translates to: GLLGGMEAQGLT*ILYSNCSQSLG
Trigger: TCCCAGGGACTGGGAACAGTTTGAATATAAAATTCAGGTAAGCCCTTGTGCCTCCATGCCACCTAGCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS TCA 72 bp AGGACCTCAGGCATTACCTGCTTAGTTTGCTCTCTCTaGAATACCTCTAGCTGCTCCACCTGGGCAGTGAGT +
Preference number: 6 (lower is better)
Translates to: RTSGITCLVCSL*NTSSCSTWAVS
Trigger: ACTCACTGCCCAGGTGGAGCAGCTAGAGGTATTTCAGAGAGAGCAAACTAAGCAGGTAATGCCTGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540588.1
CDS TCA 72 bp AGCTCCTGGTGGAAGCCTCCACACACTAGAACAGGGTaGTCTCCAGCAGTCTGGCTTAGAATTAGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: SSWWKPPHTRTG*SPAVWLRISFH
Trigger: GTGGAAACTAATTCTAAGCCAGACTGCTGGAGATCACCCTGTTCTAGTGTGTGGAGGCTTCCACCAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541641.5
CDS GCA 72 bp AAACTGCACACAAAGTCCAGTCTCTCTGACACCGGCTaGTTCAAGATTTGCTGTCCCTCTTCAGTGCCATGG +
Preference number: 6 (lower is better)
Translates to: KLHTKSSLSDTG*FKICCPSSVPW
Trigger: CCATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000366394.7
ENST00000368959.9
ENST00000393695.8
ENST00000534971.1
ENST00000534987.5
ENST00000535087.5
ENST00000535947.5
ENST00000536119.5
ENST00000537217.5
ENST00000537905.5
ENST00000537930.5
ENST00000540843.5
ENST00000541641.5
ENST00000541719.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TCAGCCTGTTTAGTAGAAGCTGGAGCTGCTTTCTTCTaGGCCTCAGTAGTGCTCTGTTTGCGCCCTTCATGT +
Preference number: 6 (lower is better)
Translates to: SACLVEAGAAFF*ASVVLCLRPSC
Trigger: ACATGAAGGGCGCAAACAGAGCACTACTGAGGCCCAGAAGAAAGCAGCTCCAGCTTCTACTAAACAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000540626.5
ENST00000541584.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp TCTGGCTGGGTACGAGGCAGCTTGCTCAGAGGGTTGTaGGGGGACAAATCAGGTATAATTGTCATGAGTGCT +
Preference number: 6 (lower is better)
Translates to: SGWVRGSLLRGL*GDKSGIIVMSA
Trigger: AGCACTCATGACAATTATACCTGATTTGTCCCCCAACAACCCTCTGAGCAAGCTGCCTCGTACCCAGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541584.5
CDS CAA 90 bp AGCTTAAAGGAAAGGTCTCCATTCTCCTCCGAAAGCTGGTTGATTTaGCGATCCATCTGGCTCTTCTCTGTCTTCAGGTCCTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: SLKERSPFSSESWLI*RSIWLFSVFRSWHC
Trigger: GCAGTGCCAGGACCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAATGGAGACCTTTCCTTTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp ACTCTGCAGAAAACTGCACACAAAGTCCAGTCTCTCTaGCACCGGCTGCTTCAAGATTTGCTGTCCCTCTTC +
Preference number: 6 (lower is better)
Translates to: TLQKTAHKVQSL*HRLLQDLLSLF
Trigger: GAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537905.5
CDS GCA 72 bp AAGTCCAGTCTCTCTGACACCGGCTGCTTCAAGATTTaGTGTCCCTCTTCAGTGCCATGGATTCTGTCAATG +
Preference number: 6 (lower is better)
Translates to: KSSLSDTGCFKI*CPSSVPWILSM
Trigger: CATTGACAGAATCCATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000366394.7
ENST00000368959.9
ENST00000393695.8
ENST00000534987.5
ENST00000535087.5
ENST00000535947.5
ENST00000536119.5
ENST00000537217.5
ENST00000537905.5
ENST00000537930.5
ENST00000540843.5
ENST00000541641.5
ENST00000541719.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS GCA 72 bp AAGTCCAGTCTCTCTGACACCGGCTGCTTCAAGATTTaGTGTCCCTCTTCAGTGCCATGGCTAGAAAAAGAG +
Preference number: 6 (lower is better)
Translates to: KSSLSDTGCFKI*CPSSVPWLEKE
Trigger: CTCTTTTTCTAGCCATGGCACTGAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS CCA 72 bp TCTCTGCTGGATCTGGAAGAGATCCAGATCAGATCCTaGAGGCAGGTGACAGATACCAGGACACCATTTATC +
Preference number: 6 (lower is better)
Translates to: SLLDLEEIQIRS*RQVTDTRTPFI
Trigger: GATAAATGGTGTCCTGGTATCTGTCACCTGCCTCCAGGATCTGATCTGGATCTCTTCCAGATCCAGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS CAA 72 bp TGTCCCTCTTCAGTGCCATGGATTCTGTCAATGATCTaGATGAAGATGCTGCAGTCCTGGAGCTGCAGCACA +
Preference number: 6 (lower is better)
Translates to: CPSSVPWILSMI*MKMLQSWSCST
Trigger: TGTGCTGCAGCTCCAGGACTGCAGCATCTTCATCAAGATCATTGACAGAATCCATGGCACTGAAGAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000366394.7
ENST00000368959.9
ENST00000393695.8
ENST00000534987.5
ENST00000535087.5
ENST00000535111.5
ENST00000535838.5
ENST00000535947.5
ENST00000536119.5
ENST00000537217.5
ENST00000537905.5
ENST00000537930.5
ENST00000540843.5
ENST00000541641.5
ENST00000541719.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000546131.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp GAAAGGTCTCCATTCTCCTCCGAAAGCTGGTTGATTTaGCGATCCATCTGGCTCTTCTCTGTCTTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: ERSPFSSESWLI*RSIWLFSVFRS
Trigger: GGACCTGAAGACAGAGAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAATGGAGACCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CAA 72 bp TTAGGCCACTTTGTCCTCCAGCAACTGGCCCTGCTCTaGGGCATTAACTTCCAACTGGTACACAAGGCTTTT +
Preference number: 6 (lower is better)
Translates to: LGHFVLQQLALL*GINFQLVHKAF
Trigger: AAAAGCCTTGTGTACCAGTTGGAAGTTAATGCCCAAGAGCAGGGCCAGTTGCTGGAGGACAAAGTGGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS TCA 72 bp TTTCTGCAGAAAACTGCACACAAAGTCCAGTCTCTCTaGCACCGGCTGCTTCAAGATTTGCTGTCCCTCTTC +
Preference number: 6 (lower is better)
Translates to: FLQKTAHKVQSL*HRLLQDLLSLF
Trigger: GAAGAGGGACAGCAAATCTTGAAGCAGCCGGTGTCAGAGAGACTGGACTTTGTGTGCAGTTTTCTGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000366394.7
ENST00000368959.9
ENST00000393695.8
ENST00000534971.1
ENST00000534987.5
ENST00000535087.5
ENST00000535947.5
ENST00000536119.5
ENST00000537217.5
ENST00000537930.5
ENST00000540843.5
ENST00000541641.5
ENST00000541719.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS TCA 72 bp GATCTCCAGCAGTCTGGCTTAGAATTAGTTTCCACCTaGGGTTGGCAGTTCAAGATCAGCCTGACCAACATG +
Preference number: 6 (lower is better)
Translates to: DLQQSGLELVST*GWQFKISLTNM
Trigger: CATGTTGGTCAGGCTGATCTTGAACTGCCAACCTCAGGTGGAAACTAATTCTAAGCCAGACTGCTGGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366394.7
CDS TCA 72 bp AGGCATTTTCCAAGCTGTGTGCCTTTGCCCATGGTGTaGCCTCCATTAAATGCCCTGTCTCCTAAACCTACT +
Preference number: 6 (lower is better)
Translates to: RHFPSCVPLPMV*PPLNALSPKPT
Trigger: AGTAGGTTTAGGAGACAGGGCATTTAATGGAGGTCACACCATGGGCAAAGGCACACAGCTTGGAAAATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS GCA 72 bp CTGAACTCCTATTCTTCCTTTACAACCTGGCTCAAATaGCTTCTCCCAAACTCTCCTTATCGCCCCCACCAT +
Preference number: 6 (lower is better)
Translates to: LNSYSSFTTWLK*LLPNSPYRPHH
Trigger: ATGGTGGGGGCGATAAGGAGAGTTTGGGAGAAGGCATTTGAGCCAGGTTGTAAAGGAAGAATAGGAGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS CAA 72 bp GTGGATTCTACAGGTCACCTCCTCTTCTTAGTGAGCTaGCTAGGCACTAGGCTGGAAGATCTGAGCTACAAA +
Preference number: 6 (lower is better)
Translates to: VDSTGHLLFLVS*LGTRLEDLSYK
Trigger: TTTGTAGCTCAGATCTTCCAGCCTAGTGCCTAGCAAGCTCACTAAGAAGAGGAGGTGACCTGTAGAATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS CAA 90 bp TTAAGAGGTGTGGATTCTACAGGTCACCTCCTCTTCTTAGTGAGCTaGCTAGGCACTAGGCTGGAAGATCTGAGCTACAAAGTAGCCTAT +
Preference number: 6 (lower is better)
Translates to: LRGVDSTGHLLFLVS*LGTRLEDLSYKVAY
Trigger: ATAGGCTACTTTGTAGCTCAGATCTTCCAGCCTAGTGCCTAGCAAGCTCACTAAGAAGAGGAGGTGACCTGTAGAATCCACACCTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS TCA 72 bp CCCCACCTCCTTCAAACAATAGGTCCTACCAAGGAATaGCTTCTCTCAGGACCAACATGTCCTGTGATTGTT +
Preference number: 6 (lower is better)
Translates to: PHLLQTIGPTKE*LLSGPTCPVIV
Trigger: AACAATCACAGGACATGTTGGTCCTGAGAGAAGTCATTCCTTGGTAGGACCTATTGTTTGAAGGAGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS CCA 72 bp CAATCCCACGAGCTGAGGAAGCAGCTTCTTCATAGCTaGATAAGAAAGGTGCTTACTCTGCAGAAAACTGCA +
Preference number: 6 (lower is better)
Translates to: QSHELRKQLLHS*IRKVLTLQKTA
Trigger: TGCAGTTTTCTGCAGAGTAAGCACCTTTCTTATCCAGCTATGAAGAAGCTGCTTCCTCAGCTCGTGGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537905.5
CDS GCA 72 bp AGAGCAAGTATTAGGACCAGAGTATTCAGCAATCTTTaGCTCCTTGCTGCTGCATTTCATAGTACCTCCCCA +
Preference number: 6 (lower is better)
Translates to: RASIRTRVFSNL*LLAAAFHSTSP
Trigger: TGGGGAGGTACTATGAAATGCAGCAGCAAGGAGGCAAAGATTGCTGAATACTCTGGTCCTAATACTTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS CCA 72 bp CTTGGTTCTGCTGCTTCTTGGCATCATAATGTGTTTTaGCTTTCTCCATCTGCAGCTTATAGTGCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: LGSAASWHHNVF*LSPSAAYSAQL
Trigger: CAGCTGAGCACTATAAGCTGCAGATGGAGAAAGCCAAAACACATTATGATGCCAAGAAGCAGCAGAACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000541584.5
ENST00000545721.1
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp ACAGATGAACGGGAAGCTATATTACACCATCTGGAATaGCTCAACTCTAAACTGTCAGGAAGCCTGGAGAAC +
Preference number: 6 (lower is better)
Translates to: TDEREAILHHLE*LNSKLSGSLEN
Trigger: GTTCTCCAGGCTTCCTGACAGTTTAGAGTTGAGCCATTCCAGATGGTGTAATATAGCTTCCCGTTCATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534971.1
CDS CAA 72 bp TTAAAGGAAAGGTCTCCATTCTCCTCCGAAAGCTGGTaGATTTTGCGATCCATCTGGCTCTTCTCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: LKERSPFSSESW*ILRSIWLFSVF
Trigger: GAAGACAGAGAAGAGCCAGATGGATCGCAAAATCAACCAGCTTTCGGAGGAGAATGGAGACCTTTCCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000540843.5
ENST00000542977.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp TTCTCTAGGTCCTCATTAAGGTTTAGCCCGTCCTCATaGTCCAGCACAAATTTAAGAATGACAGCCAACTCA +
Preference number: 6 (lower is better)
Translates to: FSRSSLRFSPSS*SSTNLRMTANS
Trigger: TGAGTTGGCTGTCATTCTTAAATTTGTGCTGGACCATGAGGACGGGCTAAACCTTAATGAGGACCTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000351960.10
ENST00000358965.10
ENST00000393695.8
ENST00000534987.5
ENST00000536119.5
ENST00000537217.5
ENST00000537930.5
ENST00000540843.5
ENST00000542977.5
ENST00000543009.5
ENST00000543937.5
ENST00000544129.5
ENST00000544238.5
ENST00000613205.4
ENST00000616538.4
ENST00000620566.4
CDS CCA 72 bp CCCTTATCTGAATTCTTTCAGTGGTACAGCCAGGGATaGCAAATTGTCAAAGCTAGTCCCTCTAATTGCAAG +
Preference number: 6 (lower is better)
Translates to: PLSEFFQWYSQG*QIVKASPSNCK
Trigger: CTTGCAATTAGAGGGACTAGCTTTGACAATTTGCCATCCCTGGCTGTACCACTGAAAGAATTCAGATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS CAA 90 bp GGCCCTTATCTGAATTCTTTCAGTGGTACAGCCAGGGATGGCAAATaGTCAAAGCTAGTCCCTCTAATTGCAAGTTATACATATAGCATG +
Preference number: 6 (lower is better)
Translates to: GPYLNSFSGTARDGK*SKLVPLIASYTYSM
Trigger: CATGCTATATGTATAACTTGCAATTAGAGGGACTAGCTTTGACAATTTGCCATCCCTGGCTGTACCACTGAAAGAATTCAGATAAGGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS CAA 90 bp ACCATCAGGAACAATTGTTCTTTCCTCTATGTGCTCCCATATTGCTaGTTCCTCTACAAACTTAATTACAATCCTCCCTGGGTGGATGCT +
Preference number: 6 (lower is better)
Translates to: TIRNNCSFLYVLPYC*FLYKLNYNPPWVDA
Trigger: AGCATCCACCCAGGGAGGATTGTAATTAAGTTTGTAGAGGAACAAGCAATATGGGAGCACATAGAGGAAAGAACAATTGTTCCTGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS GCA 72 bp CCCCCACCATCAGGAACAATTGTTCTTTCCTCTATGTaGTCCCATATTGCTTGTTCCTCTACAAACTTAATT +
Preference number: 6 (lower is better)
Translates to: PPPSGTIVLSSM*SHIACSSTNLI
Trigger: AATTAAGTTTGTAGAGGAACAAGCAATATGGGAGCACATAGAGGAAAGAACAATTGTTCCTGATGGTGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS CCA 72 bp CCAAATTGGGTTCTTACCAATAGTAACAATCACAACTaGTTCACTGAGAGCTTACTTTACACTACACGATGT +
Preference number: 6 (lower is better)
Translates to: PNWVLTNSNNHN*FTESLLYTTRC
Trigger: ACATCGTGTAGTGTAAAGTAAGCTCTCAGTGAACCAGTTGTGATTGTTACTATTGGTAAGAACCCAATTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534987.5
ENST00000540843.5
CDS CCA 72 bp TGCTTGTTCCTCTACAAACTTAATTACAATCCTCCCTaGGTGGATGCTAGCTGTAATACTTGTTTCATTTTA +
Preference number: 6 (lower is better)
Translates to: CLFLYKLNYNPP*VDASCNTCFIL
Trigger: TAAAATGAAACAAGTATTACAGCTAGCATCCACCCAGGGAGGATTGTAATTAAGTTTGTAGAGGAACAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543450.1
CDS TCA 72 bp ATTAATAACAGCAGGAAACAAAGTCTCTCAATCCTCTaGATCACAATATCCACACTGTCCATTTTGATGAAA +
Preference number: 6 (lower is better)
Translates to: INNSRKQSLSIL*ITISTLSILMK
Trigger: TTTCATCAAAATGGACAGTGTGGATATTGTGATTCAGAGGATTGAGAGACTTTGTTTCCTGCTGTTATTAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543450.1