Pregenerated sensors for NUFIP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000083635Ensembl transcript IDs: ENST00000379161.5
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TATACCTTTAATATAGGCACAATAGAGGTACAAAGAGTAAGCACTCAACAGTGTTTCATGCCAGGAGCATaGATATTTCTCCAATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YTFNIGTIEVQRVSTQQCFMPGA*IFLQWN Trigger: GTTCCATTGGAGAAATATGCATGCTCCTGGCATGAA...ACACTGTTGAGTGCTTACTCTTTGTACCTCTATTGTGCCTATATTAAAGGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379161.5 |
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| CDS-3UTR GCA 90 bp | TATACCTTTAATATAGGCACAATAGAGGTACAAAGAGTAAGCACTCAACAGTGTACATCCCCTTCATCTTaGCATATTGTGTTGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YTFNIGTIEVQRVSTQQCTSPSS*HIVLLS Trigger: TGACAACAACACAATATGGCAAGATGAAGGGGATGT...ACACTGTTGAGTGCTTACTCTTTGTACCTCTATTGTGCCTATATTAAAGGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379161.5 |
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| CDS-3UTR GCA 90 bp | TATACCTTTAATATAGGCACAATAGAGGTACAAAGAGTAAGCACTCAACAGTGTATAAGAATTTTTAACTaGAGGGTTGAAGGACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTFNIGTIEVQRVSTQQCIRIFN*RVEGLL Trigger: CAGAAGTCCTTCAACCCTGCAGTTAAAAATTCTTAT...ACACTGTTGAGTGCTTACTCTTTGTACCTCTATTGTGCCTATATTAAAGGTATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379161.5 |
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| CDS-3UTR CAA 90 bp | TATACCTTTAATATAGGCACAATAGAGGTACAAAGAGTAAGCACTCAACAGTGTGACATCCCCTTCATCTaGCCATATTGTGTTGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YTFNIGTIEVQRVSTQQCDIPFI*PYCVVV Trigger: GACAACAACACAATATGGCAAGATGAAGGGGATGTC...ACACTGTTGAGTGCTTACTCTTTGTACCTCTATTGTGCCTATATTAAAGGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379161.5 |
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| CDS-3UTR CAA 90 bp | TATACCTTTAATATAGGCACAATAGAGGTACAAAGAGTAAGCACTCAACAGTGTATTAAACTGAGTTCCTaGAAGTCAGACATGGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: YTFNIGTIEVQRVSTQQCIKLSS*KSDMAL Trigger: TAAGGCCATGTCTGACTTCAAGGAACTCAGTTTAAT...ACACTGTTGAGTGCTTACTCTTTGTACCTCTATTGTGCCTATATTAAAGGTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379161.5 |
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| CDS-3UTR CAA 90 bp | TATACCTTTAATATAGGCACAATAGAGGTACAAAGAGTAAGCACTCAACAGTGTCTAATTCAGGGCATTTaGTATGTTCAGACATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YTFNIGTIEVQRVSTQQCLIQGI*YVQTCV Trigger: AACACATGTCTGAACATACAAAATGCCCTGAATTAG...ACACTGTTGAGTGCTTACTCTTTGTACCTCTATTGTGCCTATATTAAAGGTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379161.5 |
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