Pregenerated sensors for NUF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000143228Ensembl transcript IDs: ENST00000271452.8, ENST00000367900.7, ENST00000442820.5, ENST00000450453.6, ENST00000487578.2, ENST00000490881.5, ENST00000497990.1, ENST00000524800.5, ENST00000527120.1, ENST00000527439.5, ENST00000531529.1, ENST00000534289.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGTCCCGGCACCTGCCCGCGCCTTGGGATGGAGAAGGCGTCTGTCTaGAGGCTTCCTTCCTCCGTCCTCTCGCGCTCACCTACAGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: RPGTCPRLGMEKASV*RLPSSVLSRSPTVP Trigger: CGGCACTGTAGGTGAGCGCGAGAGGACGGAGGAAGGAAGCCTGCAGACAGACGCCTTCTCCATCCCAAGGCGCGGGCAGGTGCCGGGACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000271452.8 ENST00000442820.5 ENST00000487578.2 ENST00000524800.5 |
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| CDS TCA 90 bp | TTGAGCTCCTCCCAGGCTCTGGTTTCTTCCGCCTCCTCCCACCGCTaGGCACGACGAAAACACCGCCAGGCCCAGCGTCCCGGCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: LSSSQALVSSASSHR*ARRKHRQAQRPGTC Trigger: GCAGGTGCCGGGACGCTGGGCCTGGCGGTGTTTTCGTCGTGCTCAGCGGTGGGAGGAGGCGGAAGAAACCAGAGCCTGGGAGGAGCTCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442820.5 |
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| CDS GCA 90 bp | CTGTCTGCAGGCTTCCTTCCTCCGTCCTCTCGCGCTCACCTACAGTaGCGGCCGCCGACAGGAAGACGGCGAGTTCGGGGAGCAGCTACA | + |
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Preference number: 5 (lower is better) Translates to: LSAGFLPPSSRAHLQ*RPPTGRRRVRGAAT Trigger: TGTAGCTGCTCCCCGAACTCGCCGTCTTCCTGTCGGCGGCCGGCACTGTAGGTGAGCGCGAGAGGACGGAGGAAGGAAGCCTGCAGACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271452.8 ENST00000442820.5 ENST00000487578.2 ENST00000524800.5 |
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| CDS TCA 90 bp | CTGTTAATCTCCCAGGCTCTGGTTTCTTCCGCCTCCTCCCACCGCTaGGCACGACGAAAACACCGCCAGGCCCAGCGTCCCGGCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: LLISQALVSSASSHR*ARRKHRQAQRPGTC Trigger: GCAGGTGCCGGGACGCTGGGCCTGGCGGTGTTTTCGTCGTGCTCAGCGGTGGGAGGAGGCGGAAGAAACCAGAGCCTGGGAGATTAACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271452.8 ENST00000487578.2 ENST00000524800.5 |
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| CDS CCA 90 bp | AGCAAACGTCAACCGTCATCACTTTTCAAACTTGCCGCCTCCTACTaGAAGTCCCGCCCCATTCCGCCAAGCCCACGTCCAACCGCGACG | + |
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Preference number: 5 (lower is better) Translates to: SKRQPSSLFKLAASY*KSRPIPPSPRPTAT Trigger: CGTCGCGGTTGGACGTGGGCTTGGCGGAATGGGGCGGGACTTCCAGTAGGAGGCGGCAAGTTTGAAAAGTGATGACGGTTGACGTTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000450453.6 ENST00000524800.5 |
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| CDS TCA 90 bp | GTTAATATTTCTGGAGTCTGGGAAGTGCAAGTTCAAGGTGCCTGGTaGGGACTCTCTTCTTGGCTTTCATATGGCTGTTTTCTGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VNISGVWEVQVQGAW*GLSSWLSYGCFLRK Trigger: CTTCCTCAGAAAACAGCCATATGAAAGCCAAGAAGAGAGTCCTCACCAGGCACCTTGAACTTGCACTTCCCAGACTCCAGAAATATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534289.5 |
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| CDS CCA 90 bp | TCAACTGGAACAGAATCAAGTCTCTCCAGTTTCATTAATGCCTCCTaGTGTGCGGCGTTTAACTGTTGCATTTTGTCCGCAGAGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: STGTESSLSSFINAS*CAAFNCCILSAEDF Trigger: GAAATCCTCTGCGGACAAAATGCAACAGTTAAACGCCGCACACCAGGAGGCATTAATGAAACTGGAGAGACTTGATTCTGTTCCAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527439.5 |
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| CDS CCA 90 bp | TCAACTGGAACAGAATCAAGTCTCTCCAGTTTCATTAATGCCTCCTaGTGTGCGGCGTTTAACTGTTGCATTTTGTCCGCAGAGGATTTA | + |
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Preference number: 5 (lower is better) Translates to: STGTESSLSSFINAS*CAAFNCCILSAEDL Trigger: TAAATCCTCTGCGGACAAAATGCAACAGTTAAACGCCGCACACCAGGAGGCATTAATGAAACTGGAGAGACTTGATTCTGTTCCAGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000497990.1 ENST00000524800.5 |
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| CDS TCA 90 bp | GTGAGGTTTTTACCATCAGCTCCTGTTAAGATCTTATTGCGAATATaGATCACAATCTCAGCTACATTATATCTACAGTGCCGGCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: VRFLPSAPVKILLRI*ITISATLYLQCRPP Trigger: CGGCGGCCGGCACTGTAGATATAATGTAGCTGAGATTGTGATTCATATTCGCAATAAGATCTTAACAGGAGCTGATGGTAAAAACCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490881.5 |
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| CDS GCA 90 bp | CAGTTCAGCTGTCTTCTCATCTATCTTAGCATAGGAGTCCTCTGCTaGCTTTTCAATACCGTCGTGGTATTTCTCCAAAGCAGTTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: QFSCLLIYLSIGVLC*LFNTVVVFLQSSFQ Trigger: TTGAAAACTGCTTTGGAGAAATACCACGACGGTATTGAAAAGGCAGCAGAGGACTCCTATGCTAAGATAGATGAGAAGACAGCTGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000524800.5 |
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| CDS GCA 90 bp | CTTCAGTTCAGCTGTCTTCTCATCTATCTTAGCATAGGAGTCCTCTaGTGCCTTTTCAATACCGTCGTGGTATTTCTCCAAAGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LQFSCLLIYLSIGVL*CLFNTVVVFLQSSF Trigger: AAAACTGCTTTGGAGAAATACCACGACGGTATTGAAAAGGCAGCAGAGGACTCCTATGCTAAGATAGATGAGAAGACAGCTGAACTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000524800.5 |
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| CDS GCA 90 bp | CTCTCCAGTTTCATTAATGCCTCCTGGTGTGCGGCGTTTAACTGTTaGATTTTGTCCGCAGAGGATTTATATTGCCAAAGAAATTCCATA | + |
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Preference number: 5 (lower is better) Translates to: LSSFINASWCAAFNC*ILSAEDLYCQRNSI Trigger: TATGGAATTTCTTTGGCAATATAAATCCTCTGCGGACAAAATGCAACAGTTAAACGCCGCACACCAGGAGGCATTAATGAAACTGGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000490881.5 ENST00000497990.1 ENST00000524800.5 |
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| CDS TCA 90 bp | GATTTAGTGATTGTTGTAGCTCCTGAATTCCATCTGAAAGCTGCTTaGACTCTTCTTGCTCTTCAACTGGAACAGAATCAAGTCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: DLVIVVAPEFHLKAA*TLLALQLEQNQVSP Trigger: TGGAGAGACTTGATTCTGTTCCAGTTGAAGAGCAAGAAGAGTTCAAGCAGCTTTCAGATGGAATTCAGGAGCTACAACAATCACTAAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000497990.1 ENST00000524800.5 ENST00000527439.5 |
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| CDS TCA 90 bp | CAGTCTTTTGAACGAATTTTCTTCAGTCTTCAATTTCTTCAGTTCTaGCTCATCACTCTCAATTTGGTCCTCCAAGTTCAGGCTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: QSFERIFFSLQFLQF*LITLNLVLQVQASG Trigger: GCCAGAAGCCTGAACTTGGAGGACCAAATTGAGAGTGATGAGTCAGAACTGAAGAAATTGAAGACTGAAGAAAATTCGTTCAAAAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524800.5 |
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| CDS TCA 90 bp | CAGTCTTTTGAACGAATTTTCTTCAGTCTTCAATTTCTTCAGTTCTaGCTCATCACTCTCAATTTGGTCCTCCAAGTTCAGGCTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: QSFERIFFSLQFLQF*LITLNLVLQVQALL Trigger: AAGGAGAGCCTGAACTTGGAGGACCAAATTGAGAGTGATGAGTCAGAACTGAAGAAATTGAAGACTGAAGAAAATTCGTTCAAAAGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271452.8 ENST00000367900.7 |
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| CDS TCA 90 bp | GATTTAGTGATTGTTGTAGCTCCTGAATTCCATCTGAAAGCTGCTTaGACTCTTCTTGCTCTTCAACTGGAACAGAACTTAACACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: DLVIVVAPEFHLKAA*TLLALQLEQNLTQQ Trigger: TTGCTGTGTTAAGTTCTGTTCCAGTTGAAGAGCAAGAAGAGTTCAAGCAGCTTTCAGATGGAATTCAGGAGCTACAACAATCACTAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527120.1 |
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| CDS TCA 90 bp | TGTGCAAGACTTCAGGCTTTGGATTTGGATAAAGATCATTCTTGGTaGGGTTTTTACCATCAGCTCCTGTTAAGATCTTATTGCGAATAT | + |
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Preference number: 5 (lower is better) Translates to: CARLQALDLDKDHSW*GFYHQLLLRSYCEY Trigger: ATATTCGCAATAAGATCTTAACAGGAGCTGATGGTAAAAACCTCACCAAGAATGATCTTTATCCAAATCCAAAGCCTGAAGTCTTGCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000450453.6 ENST00000487578.2 ENST00000490881.5 ENST00000497990.1 ENST00000524800.5 ENST00000534289.5 |
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| CDS TCA 90 bp | GTGAGGTTTTTACCATCAGCTCCTGTTAAGATCTTATTGCGAATATaGATCACAATCTCAGCTACATTATATCTGGGGAAAGACAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: VRFLPSAPVKILLRI*ITISATLYLGKDKV Trigger: AACTTTGTCTTTCCCCAGATATAATGTAGCTGAGATTGTGATTCATATTCGCAATAAGATCTTAACAGGAGCTGATGGTAAAAACCTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000450453.6 ENST00000487578.2 ENST00000497990.1 ENST00000524800.5 ENST00000534289.5 |
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| CDS CCA 72 bp | AGGCCCAGCGTCCCGGCACCTGCCCGCGCCTTGGGATaGAGAAGGCGTCTGTCTGCAGGCTTCCTTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RPSVPAPARALG*RRRLSAGFLPP Trigger: CGGAGGAAGGAAGCCTGCAGACAGACGCCTTCTCCATCCCAAGGCGCGGGCAGGTGCCGGGACGCTGGGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000271452.8 ENST00000442820.5 ENST00000487578.2 ENST00000524800.5 |
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| CDS GCA 72 bp | GGCTTCCTTCCTCCGTCCTCTCGCGCTCACCTACAGTaGCGGCCGCCGACAGGAAGACGGCGAGTTCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GFLPPSSRAHLQ*RPPTGRRRVRG Trigger: TCCCCGAACTCGCCGTCTTCCTGTCGGCGGCCGGCACTGTAGGTGAGCGCGAGAGGACGGAGGAAGGAAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271452.8 ENST00000442820.5 ENST00000487578.2 ENST00000524800.5 |
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| CDS TCA 72 bp | TCCCAGGCTCTGGTTTCTTCCGCCTCCTCCCACCGCTaGGCACGACGAAAACACCGCCAGGCCCAGCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SQALVSSASSHR*ARRKHRQAQRP Trigger: GGGACGCTGGGCCTGGCGGTGTTTTCGTCGTGCTCAGCGGTGGGAGGAGGCGGAAGAAACCAGAGCCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271452.8 ENST00000442820.5 ENST00000487578.2 ENST00000524800.5 |
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| CDS GCA 72 bp | ACCTGCCCGCGCCTTGGGATGGAGAAGGCGTCTGTCTaGAGGCTTCCTTCCTCCGTCCTCTCGCGCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: TCPRLGMEKASV*RLPSSVLSRSP Trigger: AGGTGAGCGCGAGAGGACGGAGGAAGGAAGCCTGCAGACAGACGCCTTCTCCATCCCAAGGCGCGGGCAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000271452.8 ENST00000442820.5 ENST00000487578.2 ENST00000524800.5 |
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| CDS CCA 72 bp | CAACCGTCATCACTTTTCAAACTTGCCGCCTCCTACTaGAAGTCCCGCCCCATTCCGCCAAGCCCACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: QPSSLFKLAASY*KSRPIPPSPRP Trigger: TGGACGTGGGCTTGGCGGAATGGGGCGGGACTTCCAGTAGGAGGCGGCAAGTTTGAAAAGTGATGACGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000450453.6 ENST00000524800.5 |
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| CDS GCA 72 bp | AATCAGCAAACGTCAACCGTCATCACTTTTCAAACTTaGCGCCTCCTACTGGAAGTCCCGCCCCATTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: NQQTSTVITFQT*RLLLEVPPHSA Trigger: GGCGGAATGGGGCGGGACTTCCAGTAGGAGGCGGCAAGTTTGAAAAGTGATGACGGTTGACGTTTGCTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000450453.6 ENST00000524800.5 |
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| CDS CAA 72 bp | AAATCAGCAAACGTCAACCGTCATCACTTTTCAAACTaGCCGCCTCCTACTGGAAGTCCCGCCCCATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: KSANVNRHHFSN*PPPTGSPAPFR Trigger: GCGGAATGGGGCGGGACTTCCAGTAGGAGGCGGCAAGTTTGAAAAGTGATGACGGTTGACGTTTGCTGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000450453.6 ENST00000524800.5 |
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| CDS CAA 90 bp | AGTCTGGGAAGTGCAAGTTCAAGGTGCCTGGTGAGGACTCTCTTCTaGGCTTTCATATGGCTGTTTTCTGAGGAAGCTGAGAGAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SLGSASSRCLVRTLF*AFIWLFSEEAERGC Trigger: ACAGCCTCTCTCAGCTTCCTCAGAAAACAGCCATATGAAAGCCAAGAAGAGAGTCCTCACCAGGCACCTTGAACTTGCACTTCCCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534289.5 |
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| CDS TCA 72 bp | TTACTATCCACAGTTTCAGGCATCCCCTGGAGGTCCTaGAATGAATCTCCTAAGGATAAGGGGGAGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: LLSTVSGIPWRS*NESPKDKGELL Trigger: CAGTAGCTCCCCCTTATCCTTAGGAGATTCATTTCAGGACCTCCAGGGGATGCCTGAAACTGTGGATAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000527439.5 |
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| CDS TCA 72 bp | TCTGGAGTCTGGGAAGTGCAAGTTCAAGGTGCCTGGTaGGGACTCTCTTCTTGGCTTTCATATGGCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SGVWEVQVQGAW*GLSSWLSYGCF Trigger: AAAACAGCCATATGAAAGCCAAGAAGAGAGTCCTCACCAGGCACCTTGAACTTGCACTTCCCAGACTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534289.5 |
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| CDS CAA 72 bp | AGTGCAAGTTCAAGGTGCCTGGTGAGGACTCTCTTCTaGGCTTTCATATGGCTGTTTTCTGAGGAAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SASSRCLVRTLF*AFIWLFSEEAE Trigger: CTCAGCTTCCTCAGAAAACAGCCATATGAAAGCCAAGAAGAGAGTCCTCACCAGGCACCTTGAACTTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534289.5 |
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| CDS CCA 72 bp | ACAGAATCAAGTCTCTCCAGTTTCATTAATGCCTCCTaGTGTGCGGCGTTTAACTGTTGCATTTTGTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: TESSLSSFINAS*CAAFNCCILSA Trigger: TGCGGACAAAATGCAACAGTTAAACGCCGCACACCAGGAGGCATTAATGAAACTGGAGAGACTTGATTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000497990.1 ENST00000524800.5 ENST00000527439.5 |
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| CDS CCA 72 bp | CTACATTATATCTGGGGAAAGACAAAGTTTCCATCTTaGAAGTTTCCTGTTAATCTACAGTGCCGGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: LHYIWGKTKFPS*KFPVNLQCRPP Trigger: CGGCGGCCGGCACTGTAGATTAACAGGAAACTTCCAAGATGGAAACTTTGTCTTTCCCCAGATATAATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367900.7 ENST00000497990.1 |
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| CDS GCA 72 bp | TGTCTTCTCATCTATCTTAGCATAGGAGTCCTCTGCTaGCTTTTCAATACCGTCGTGGTATTTCTCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: CLLIYLSIGVLC*LFNTVVVFLQS Trigger: GCTTTGGAGAAATACCACGACGGTATTGAAAAGGCAGCAGAGGACTCCTATGCTAAGATAGATGAGAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000524800.5 |
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| CDS GCA 72 bp | AGCTGTCTTCTCATCTATCTTAGCATAGGAGTCCTCTaGTGCCTTTTCAATACCGTCGTGGTATTTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SCLLIYLSIGVL*CLFNTVVVFLQ Trigger: TTGGAGAAATACCACGACGGTATTGAAAAGGCAGCAGAGGACTCCTATGCTAAGATAGATGAGAAGACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000524800.5 |
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| CDS CAA 72 bp | AATGCCTCCTGGTGTGCGGCGTTTAACTGTTGCATTTaGTCCGCAGAGGATTTATATTGCCAAAGAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: NASWCAAFNCCI*SAEDLYCQRNS Trigger: GGAATTTCTTTGGCAATATAAATCCTCTGCGGACAAAATGCAACAGTTAAACGCCGCACACCAGGAGGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000490881.5 ENST00000497990.1 ENST00000524800.5 |
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| CDS GCA 72 bp | TTCATTAATGCCTCCTGGTGTGCGGCGTTTAACTGTTaGATTTTGTCCGCAGAGGATTTATATTGCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: FINASWCAAFNC*ILSAEDLYCQR Trigger: TCTTTGGCAATATAAATCCTCTGCGGACAAAATGCAACAGTTAAACGCCGCACACCAGGAGGCATTAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000490881.5 ENST00000497990.1 ENST00000524800.5 |
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| CDS CCA 72 bp | TTTGGTCCTCCAAGTTCAGGCTCTCCTTTAAGATACTaGCTAATTTTTCCCTATTATCTGAAAGGTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: FGPPSSGSPLRY*LIFPYYLKGPV Trigger: TACAGGACCTTTCAGATAATAGGGAAAAATTAGCCAGTATCTTAAAGGAGAGCCTGAACTTGGAGGACCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000271452.8 ENST00000367900.7 |
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| CDS TCA 72 bp | CTTCAGGCTTTGGATTTGGATAAAGATCATTCTTGGTaGGGTTTTTACCATCAGCTCCTGTTAAGATCTTAT | + |
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Preference number: 6 (lower is better) Translates to: LQALDLDKDHSW*GFYHQLLLRSY Trigger: ATAAGATCTTAACAGGAGCTGATGGTAAAAACCTCACCAAGAATGATCTTTATCCAAATCCAAAGCCTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000450453.6 ENST00000487578.2 ENST00000490881.5 ENST00000497990.1 ENST00000524800.5 ENST00000534289.5 |
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| CDS CCA 72 bp | CTACATTATATCTGGGGAAAGACAAAGTTTCCATCTTaGAAGTTTCCTGTTAATCTTACCCACCACATCAAA | + |
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Preference number: 6 (lower is better) Translates to: LHYIWGKTKFPS*KFPVNLTHHIK Trigger: TTTGATGTGGTGGGTAAGATTAACAGGAAACTTCCAAGATGGAAACTTTGTCTTTCCCCAGATATAATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442820.5 ENST00000450453.6 |
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| CDS CCA 72 bp | AGTTCAATTGAAAATATGCTGAGAAAGTGGCACAGTTaGAGGCAGTTCTGTTTGATGACAGTCTACAATTTT | + |
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Preference number: 6 (lower is better) Translates to: SSIENMLRKWHS*RQFCLMTVYNF Trigger: AAAATTGTAGACTGTCATCAAACAGAACTGCCTCCAACTGTGCCACTTTCTCAGCATATTTTCAATTGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487578.2 |
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| CDS CAA 72 bp | TTAGTTCATTCAAACGCTTGGTTTTCTCTGAAATATTaGACTTCTTTTGGGAATTTCCCTCTTGCAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: LVHSNAWFSLKY*TSFGNFPLAAR Trigger: ACGTGCTGCAAGAGGGAAATTCCCAAAAGAAGTCAAATATTTCAGAGAAAACCAAGCGTTTGAATGAACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497990.1 |
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| CDS CAA 90 bp | ATTGAAAATATGCTGAGAAAGTGGCACAGTTGGAGGCAGTTCTGTTaGATGACAGTCTACAATTTTGAAAGTTTGAATGAATGTATATGG | + |
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Preference number: 6 (lower is better) Translates to: IENMLRKWHSWRQFC*MTVYNFESLNECIW Trigger: CCATATACATTCATTCAAACTTTCAAAATTGTAGACTGTCATCAAACAGAACTGCCTCCAACTGTGCCACTTTCTCAGCATATTTTCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487578.2 |
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| CDS TCA 72 bp | TTACCATCAGCTCCTGTTAAGATCTTATTGCGAATATaGATCACAATCTCAGCTACATTATATCTGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LPSAPVKILLRI*ITISATLYLGK Trigger: TTTCCCCAGATATAATGTAGCTGAGATTGTGATTCATATTCGCAATAAGATCTTAACAGGAGCTGATGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000442820.5 ENST00000450453.6 ENST00000487578.2 ENST00000497990.1 ENST00000524800.5 ENST00000534289.5 |
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| CDS TCA 72 bp | TTACCATCAGCTCCTGTTAAGATCTTATTGCGAATATaGATCACAATCTCAGCTACATTATATCTACAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LPSAPVKILLRI*ITISATLYLQC Trigger: GCACTGTAGATATAATGTAGCTGAGATTGTGATTCATATTCGCAATAAGATCTTAACAGGAGCTGATGGTAA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490881.5 |
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| CDS CAA 72 bp | TTAGTTCATTCAAACGCTTGGTTTTCTCTGAAATATTaGACTTCTTTTGGGAATTTCCCTCTTGCAGCACTA | + |
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Preference number: 6 (lower is better) Translates to: LVHSNAWFSLKY*TSFGNFPLAAL Trigger: TAGTGCTGCAAGAGGGAAATTCCCAAAAGAAGTCAAATATTTCAGAGAAAACCAAGCGTTTGAATGAACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000271452.8 ENST00000367900.7 ENST00000524800.5 ENST00000527120.1 ENST00000527439.5 ENST00000531529.1 |
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