RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT9 (Homo sapiens)

Ensembl gene IDs: ENSG00000170502

Ensembl transcript IDs: ENST00000302174.9, ENST00000440591.6, ENST00000473942.5, ENST00000502933.1, ENST00000512216.5, ENST00000514227.1, ENST00000514345.1

Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACATTAAACTATACATCCAGTGGCGGTACTCTGCCTAAAGGAGTTTaGTGTGGCAGGAACATCCTTCAGGCCTCAGAAGATGGGGAGCGG +
Preference number: 1 (lower is better)
Translates to: TLNYTSSGGTLPKGV*CGRNILQASEDGER
Trigger: CCGCTCCCCATCTTCTGAGGCCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGGATGTATAGTTTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR TCA 90 bp ATATACCTAGTAATGGGATTACTGGGTCAAATATCTTTAAATATTTaGGGACTCTCTACACTCTCTTCCACAATGGTTGGACCAATTTAC +
Preference number: 1 (lower is better)
Translates to: IYLVMGLLGQISLNI*GLSTLSSTMVGPIY
Trigger: GTAAATTGGTCCAACCATTGTGGAAGAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATTACTAGGTATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR TCA 90 bp TACCACATTGTCTTTATCCAGTCTATCACTGATGAACATTTAGGTTaGTTTCATGTCTTCGCTATTGTGAATAGTGCAGCAATGAACATA +
Preference number: 1 (lower is better)
Translates to: YHIVFIQSITDEHLG*FHVFAIVNSAAMNI
Trigger: TATGTTCATTGCTGCACTATTCACAATAGCGAAGACATGAAATCAACCTAAATGTTCATCAGTGATAGACTGGATAAAGACAATGTGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR-3UTR CCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGGTATATGCTCCTCTGTaGGCCTTTGGCTTACACGGA +
Preference number: 2 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRVYAPL*AFGLHG
Trigger: TCCGTGTAAGCCAAAGGCCCACAGAGGAGCATATAC...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR-3UTR TCA 90 bp TTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAACACTAGGTGGTCTTGGCTaGAGAGTTTGTGCAACTTTT +
Preference number: 2 (lower is better)
Translates to: FTASVSIHALSVFRGSSTLGGLG*RVCATF
Trigger: AAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAG...TGTTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502933.1
3UTR-3UTR CCA 90 bp TTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAACAATCACTAGGTGGTCTTaGCTGAAGAGTTTGTGCAAC +
Preference number: 2 (lower is better)
Translates to: FTASVSIHALSVFRGSSTITRWS*LKSLCN
Trigger: GTTGCACAAACTCTTCAGCCAAGACCACCTAGTGAT...TGTTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502933.1
3UTR CAA 90 bp TCAACATATCCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTaGTGCAACTTTTCCTCTATTTCTCTCTTCTCAGCACTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: STYPLYITRWSWLKS*CNFSSISLFSALVF
Trigger: GAAAACCAGTGCTGAGAAGAGAGAAATAGAGGAAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGGATATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502933.1
3UTR-3UTR TCA 90 bp ACATATCCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTTGTGCAACTTTTTTTCTGTAAGGAGTTaGGAGCTTCCTCACCAAATT +
Preference number: 2 (lower is better)
Translates to: TYPLYITRWSWLKSLCNFFSVRS*ELPHQI
Trigger: AATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAA...AAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGGATATGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000502933.1
3UTR-3UTR GCA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGCTTCTTTTCAGTATATaGTCCTCTGTGGGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLLLFSI*SSVGLW
Trigger: CCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAG...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR-3UTR GCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCCCAAGTGGCCTACCCTaGCCTTTTTATAGTATAAAT +
Preference number: 2 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLPSGLP*PFYSIN
Trigger: ATTTATACTATAAAAAGGGCAGGGTAGGCCACTTGG...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR-3UTR TCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCGATTTTGATCTCTATTaGCTAGTGGCTGAAATTTCC +
Preference number: 2 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLDFDLY*LVAEIS
Trigger: GGAAATTTCAGCCACTAGTCAATAGAGATCAAAATC...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR TCA 72 bp TATACATCCAGTGGCGGTACTCTGCCTAAAGGAGTTTaGTGTGGCAGGAACATCCTTCAGGCCTCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: YTSSGGTLPKGV*CGRNILQASED
Trigger: ATCTTCTGAGGCCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGGATGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR-3UTR CAA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGCTCCTCTGTGGGCCTTaGGCTTACACGGAGACCATC +
Preference number: 3 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLLLCGP*AYTETI
Trigger: GATGGTCTCCGTGTAAGCCAAAGGCCCACAGAGGAG...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR-3UTR CAA 90 bp AGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAACATATCCTCTTGGCTGAAGAGTTaGTGCAACTTTTCCTCTATT +
Preference number: 3 (lower is better)
Translates to: SFCLHPCIISVSRIINISSWLKS*CNFSSI
Trigger: AATAGAGGAAAAGTTGCACAAACTCTTCAGCCAAGA...GGATATGTTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
3UTR-3UTR CAA 90 bp ACATATCCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTTGTGCAACTTTGTTTTCTGTAAGGAGTaGAGAGCTTCCTCACCAAAT +
Preference number: 3 (lower is better)
Translates to: TYPLYITRWSWLKSLCNFVFCKE*RASSPN
Trigger: ATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAAC...AAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
3UTR TCA 72 bp CAACATATCCCTTATATATCACTAGGTGGTCTTGGCTaGAGAGTTTGTGCAACTTTTCCTCTATTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: QHIPYISLGGLG*RVCATFPLFLS
Trigger: AGAGAGAAATAGAGGAAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGGATATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
3UTR TCA 72 bp GTAATGGGATTACTGGGTCAAATATCTTTAAATATTTaGGGACTCTCTACACTCTCTTCCACAATGGTTGGA +
Preference number: 3 (lower is better)
Translates to: VMGLLGQISLNI*GLSTLSSTMVG
Trigger: TCCAACCATTGTGGAAGAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR TCA 72 bp GTCTTTATCCAGTCTATCACTGATGAACATTTAGGTTaGTTTCATGTCTTCGCTATTGTGAATAGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: VFIQSITDEHLG*FHVFAIVNSAA
Trigger: TGCTGCACTATTCACAATAGCGAAGACATGAAATCAACCTAAATGTTCATCAGTGATAGACTGGATAAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGGCCTCCAGCGCCAGCTaGCTGGGGAAACCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRASSAS*LGKPRP
Trigger: TGGCCGCGGTTTCCCCAGGCAGCTGGCGCTGGAGGC...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGCCGGCCGCGGGTATCTaGTGGGCACTAGGACCTGTC +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRPAAGI*WALGPV
Trigger: GACAGGTCCTAGTGCCCATCAGATACCCGCGGCCGG...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR CCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGGAGTTTCTGAACGCCTaGATGCCGCGGCAGCGCGAG +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFREFLNA*MPRQRE
Trigger: CTCGCGCTGCCGCGGCATCCAGGCGTTCAGAAACTC...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR TCA 90 bp CCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTTGTGCAACTTTTCCTCTGGAGGCGTCCCGCCATaGGCGCCCCGAGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: PLYITRWSWLKSLCNFSSGGVPP*APRGRL
Trigger: AAGCCGCCCTCGGGGCGCTCATGGCGGGACGCCTCC...AGAGGAAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR CCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACCCAGCGCCAGCTGCCTaGGGAAACCGCGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYPAPAA*GNRGHE
Trigger: TTCGTGGCCGCGGTTTCCCCAGGCAGCTGGCGCTGG...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGAGGCGTCCCGCCATaGGCGCCCCGAGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFGGVPP*APRGRL
Trigger: AAGCCGCCCTCGGGGCGCTCATGGCGGGACGCCTCC...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR GCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGCAGTCCAGTCCGTCCTaGAGGATTTCTCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRQSSPS*RISRSS
Trigger: GGAAGACCGAGAAATCCTGCAGGACGGACTGGACTG...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGGTCCTCGCTCCAGTGTaGATCTCGTTTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRVLAPV*ISFLSH
Trigger: GTGGCTGAGAAACGAGATGCACACTGGAGCGAGGAC...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGTCCTCTGTGGGCCTTTaGCTTACACGGAGACCATCA +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRSSVGL*LTRRPS
Trigger: TGATGGTCTCCGTGTAAGCCAAAGGCCCACAGAGGA...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGCCTCCAGCGCCAGCTaGCTGGGGAAACCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFASSAS*LGKPRP
Trigger: TGGCCGCGGTTTCCCCAGGCAGCTGGCGCTGGAGGC...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGCACCGCTTTCCCCAGTaGATCGAGAAAAATCCAGAC +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRHRFPQ*IEKNPD
Trigger: GTCTGGATTTTTCTCGATGCACTGGGGAAAGCGGTG...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR GCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACGCACTAGGACCTGTCTaGCGTTGGGTTCCCGAACGG +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYALGPV*RWVPER
Trigger: CCGTTCGGGAACCCAACGGCAGACAGGTCCTAGTGC...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR GCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGCCAGTGGCGGTACTCTaGCTAAAGGAGTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRPVAVL*LKEFDV
Trigger: CACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGCCAGCGCCAGCTGCCTaGGGAAACCGCGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLPAPAA*GNRGHE
Trigger: TTCGTGGCCGCGGTTTCCCCAGGCAGCTGGCGCTGG...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp TTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAACAATGGGATCTGCAGCGTaGTTTGGGCCCCATCGCCCC +
Preference number: 4 (lower is better)
Translates to: FTASVSIHALSVFRGSSTMGSAA*FGPHRP
Trigger: GGGGCGATGGGGCCCAAATCACGCTGCAGATCCCAT...TGTTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp AGTTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAAGTCCTGCAGGATTTCTaGACGCCTGGATGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SSQLLSPSMHYQCFEDHQVLQDF*TPGCRG
Trigger: GCCGCGGCATCCAGGCGTTCAGAAATCCTGCAGGAC...TTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGATGGGATCTGCAGCGTaGTTTGGGCCCCATCGCCCC +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLMGSAA*FGPHRP
Trigger: GGGGCGATGGGGCCCAAATCACGCTGCAGATCCCAT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGCATACAGGCCATTCTTaGTCTTTCTCTCAACATGCC +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRHTGHS*SFSQHA
Trigger: GGCATGTTGAGAGAAAGAGCAAGAATGGCCTGTATG...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGGTCCGAGCCTTATTGTaGGAATTTTCTTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRVRALL*EFSLEP
Trigger: TGGTTCCAAAGAAAATTCTCACAATAAGGCTCGGAC...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGAAAAATTACTTTCACTaGTCTGAGGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRKNYFH*SEDLPT
Trigger: GGTGGGCAGATCCTCAGATCAGTGAAAGTAATTTTT...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTATGGGATCTGCAGCGTaGTTTGGGCCCCATCGCCCC +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFMGSAA*FGPHRP
Trigger: GGGGCGATGGGGCCCAAATCACGCTGCAGATCCCAT...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp ACATATCCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTTGTGCAACTTTGGATTTCTGAACGCCTaGATGCCGCGGCAGCGCGAG +
Preference number: 4 (lower is better)
Translates to: TYPLYITRWSWLKSLCNFGFLNA*MPRQRE
Trigger: CTCGCGCTGCCGCGGCATCCAGGCGTTCAGAAATCC...AAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGGATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGATCCAGACCAGCACGTaGCGCCGAAGCCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLIQTST*RRSLQR
Trigger: GCGCTGGAGGCTTCGGCGTCACGTGCTGGTCTGGAT...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR GCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGCCAAGTGGCCTACCCTaGCCTTTTTATAGTATAAAT +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRPSGLP*PFYSIN
Trigger: ATTTATACTATAAAAAGGGCAGGGTAGGCCACTTGG...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp CCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTTGTGCAACTTTTCCTCTCAGTCCAGTCCGTCCTaGAGGATTTCTGAACGCCTG +
Preference number: 4 (lower is better)
Translates to: PLYITRWSWLKSLCNFSSQSSPS*RISERL
Trigger: CAGGCGTTCAGAAATCCTGCAGGACGGACTGGACTG...AGAGGAAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR CCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGAGGATCTGCCCACCTaGGTCCAGCCAAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLEDLPT*VQPRQR
Trigger: TCTCTGTCTTGGCTGGACCCAGGTGGGCAGATCCTC...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACATCAGCTACAACGCATaGCAGTCAGCTTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYISYNA*QSASES
Trigger: GGACTCTGAAGCTGACTGCCATGCGTTGTAGCTGAT...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACGTATATGCTCCTCTGTaGGCCTTTGGCTTACACGGA +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYVYAPL*AFGLHG
Trigger: TCCGTGTAAGCCAAAGGCCCACAGAGGAGCATATAC...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACGCTTCGTTCAACTTTTaGACCTGGGTAAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYASFNF*TWVRRR
Trigger: ACGTCTCCTTACCCAGGTTCAAAAGTTGAACGAAGC...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGCAGAAACAGGATGCATaGTTTTATTTCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRQKQDA*FYFHCY
Trigger: ATAGCAGTGGAAATAAAATCATGCATCCTGTTTCTG...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGACGAGTTTCAGCACGTaGCGCCGAAGCCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLTSFST*RRSLQR
Trigger: GCGCTGGAGGCTTCGGCGTCACGTGCTGAAACTCGT...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473942.5
CDS-3UTR GCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCGTCGCTCTTAGTTGGTaGCTCCGCCTCCCCACACCC +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLVALSW*LRLPTP
Trigger: GGGTGTGGGGAGGCGGAGGCACCAACTAAGAGCGAC...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR GCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGACTGATCTGAGGATCTaGCCACCTGGGTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLTDLRI*PPGSSQ
Trigger: TTGGCTGGACCCAGGTGGGCAGATCCTCAGATCAGT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGTCCTCGCTCCAGTGTaGATCTCGTTTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLVLAPV*ISFLSH
Trigger: GTGGCTGAGAAACGAGATGCACACTGGAGCGAGGAC...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACCTAGGTGGTCTTGGCTaGAGAGTTTGTGCAACTTTT +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYLGGLG*RVCATF
Trigger: AAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAG...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGCCCCGAGGGCGGCTTTaGGATGCTAGGTCGCTCTTA +
Preference number: 4 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLPRGRL*DARSLL
Trigger: TAAGAGCGACCTAGCATCGCAAAGCCGCCCTCGGGG...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR GCA 90 bp AGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAACATATCCGGTTATAATGGGATCTaGAGCGTGATTTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SFCLHPCIISVSRIINISGYNGI*SVIWAP
Trigger: TGGGGCCCAAATCACGCTGCAGATCCCATTATAACC...GGATATGTTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACGTCCGAGCCTTATTGTaGGAATTTTCTTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYVRALL*EFSLEP
Trigger: TGGTTCCAAAGAAAATTCTCACAATAAGGCTCGGAC...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGGTTATAATGGGATCTaGAGCGTGATTTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLGYNGI*SVIWAP
Trigger: TGGGGCCCAAATCACGCTGCAGATCCCATTATAACC...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGCCAGTGGCGGTACTCTaGCTAAAGGAGTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLPVAVL*LKEFDV
Trigger: CACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCGAGGATCTGCCCACCTaGGTCCAGCCAAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLEDLPT*VQPRQR
Trigger: TCTCTGTCTTGGCTGGACCCAGGTGGGCAGATCCTC...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGATCAGCTACAACGCATaGCAGTCAGCTTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLISYNA*QSASES
Trigger: GGACTCTGAAGCTGACTGCCATGCGTTGTAGCTGAT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp CCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTTGTGCAACTTTTCCTCTACTAATCTTCTCTCCTaGATCCACCATCCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLYITRWSWLKSLCNFSSTNLLS*IHHPLV
Trigger: AACCAGGGGATGGTGGATCCAGGAGAGAAGATTAGT...AGAGGAAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp AGTTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAACTAGGTGGTCTTGGCTaGAGAGTTTGTGCAACTTTT +
Preference number: 4 (lower is better)
Translates to: SSQLLSPSMHYQCFEDHQLGGLG*RVCATF
Trigger: AAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAG...TTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACGGTAAACTTGTGTCATaGGGGTTTGTTGTACAGATA +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYGKLVS*GFVVQI
Trigger: TATCTGTACAACAAACCCTCATGACACAAGTTTACC...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGAGCCAAGACAGAGACTaGAGTGTATTCCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLSQDRD*SVFHRL
Trigger: AAGCCTGTGGAATACACTGCAGTCTCTGTCTTGGCT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCCAGTCCAGTCCGTCCTaGAGGATTTCTCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLQSSPS*RISRSS
Trigger: GGAAGACCGAGAAATCCTGCAGGACGGACTGGACTG...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp CCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTTGTGCAACTTTTCCTCTATCACTAGGTGGTCTTaGCTGAAGAGTTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: PLYITRWSWLKSLCNFSSITRWS*LKSLCN
Trigger: GTTGCACAAACTCTTCAGCCAAGACCACCTAGTGAT...AGAGGAAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACCAGAAACAGGATGCATaGTTTTATTTCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYQKQDA*FYFHCY
Trigger: ATAGCAGTGGAAATAAAATCATGCATCCTGTTTCTG...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGCTAGGTGGTCTTGGCTaGAGAGTTTGTGCAACTTTT +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLLGGLG*RVCATF
Trigger: AAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAG...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTCTGCCTAAAGGAGTTTaGTGTGGCAGGAACATCCTT +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFLPKGV*CGRNIL
Trigger: AAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAG...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp AGTTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAATTCTGTCTCCATCCATaGATTATCAGTGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: SSQLLSPSMHYQCFEDHQFCLHP*IISVSR
Trigger: CCTCGAAACACTGATAATGCATGGATGGAGACAGAA...TTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR GCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGCTTCTTTTCAGTATATaGTCCTCTGTGGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLLLFSI*SSVGLW
Trigger: CCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAG...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACTTCTCATTAGGAACCTaGCTTCGTTCAACTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYFSLGT*LRSTFE
Trigger: TTCAAAAGTTGAACGAAGCCAGGTTCCTAATGAGAA...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGTCCTCTGTGGGCCTTTaGCTTACACGGAGACCATCA +
Preference number: 4 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLSSVGL*LTRRPS
Trigger: TGATGGTCTCCGTGTAAGCCAAAGGCCCACAGAGGA...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
3UTR CAA 72 bp CCCTTATATATCACTAGGTGGTCTTGGCTGAAGAGTTaGTGCAACTTTTCCTCTATTTCTCTCTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PLYITRWSWLKS*CNFSSISLFSA
Trigger: TGCTGAGAAGAGAGAAATAGAGGAAAAGTTGCACAAACTCTTCAGCCAAGACCACCTAGTGATATATAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGAAAAATTACTTTCACTaGTCTGAGGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLKNYFH*SEDLPT
Trigger: GGTGGGCAGATCCTCAGATCAGTGAAAGTAATTTTT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp AGTTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAATTTTCTGTAAGGAGTTaGGAGCTTCCTCACCAAATT +
Preference number: 4 (lower is better)
Translates to: SSQLLSPSMHYQCFEDHQFSVRS*ELPHQI
Trigger: AATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAA...TTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR GCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTCATACAGGCCATTCTTaGTCTTTCTCTCAACATGCC +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFHTGHS*SFSQHA
Trigger: GGCATGTTGAGAGAAAGAGCAAGAATGGCCTGTATG...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTATCACTAGGTGGTCTTaGCTGAAGAGTTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFITRWS*LKSLCN
Trigger: GTTGCACAAACTCTTCAGCCAAGACCACCTAGTGAT...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGGTATATGCTCCTCTGTaGGCCTTTGGCTTACACGGA +
Preference number: 4 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLVYAPL*AFGLHG
Trigger: TCCGTGTAAGCCAAAGGCCCACAGAGGAGCATATAC...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGATGAAACCAAGAAGATaGAAACGAGTTTCTGAACGC +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLMKPRR*KRVSER
Trigger: GCGTTCAGAAACTCGTTTTCATCTTCTTGGTTTCAT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR TCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCGCTTCGTTCAACTTTTaGACCTGGGTAAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLASFNF*TWVRRR
Trigger: ACGTCTCCTTACCCAGGTTCAAAAGTTGAACGAAGC...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCCTGCCTAAAGGAGTTTaGTGTGGCAGGAACATCCTT +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLLPKGV*CGRNIL
Trigger: AAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAG...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGGTAAACTTGTGTCATaGGGGTTTGTTGTACAGATA +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLGKLVS*GFVVQI
Trigger: TATCTGTACAACAAACCCTCATGACACAAGTTTACC...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCAGCCAAGACAGAGACTaGAGTGTATTCCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLSQDRD*SVFHRL
Trigger: AAGCCTGTGGAATACACTGCAGTCTCTGTCTTGGCT...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTTTCTGTCTCCATCCATaGATTATCAGTGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFFCLHP*IISVSR
Trigger: CCTCGAAACACTGATAATGCATGGATGGAGACAGAA...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp TTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAACATTATATATCACTAGGTaGTCTTGGCTGAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: FTASVSIHALSVFRGSSTLYITR*SWLKSL
Trigger: CAAACTCTTCAGCCAAGACCACCTAGTGATATATAA...TGTTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR TCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTTTTTCTGTAAGGAGTTaGGAGCTTCCTCACCAAATT +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFFSVRS*ELPHQI
Trigger: AATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAA...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGTTCCCAGAAACAGGATaGATGATTTTATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLFPETG*MILFPL
Trigger: CAGTGGAAATAAAATCATGCATCCTGTTTCTGGGAA...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCCTTCTTTTCAGTATATaGTCCTCTGTGGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLLLFSI*SSVGLW
Trigger: CCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAG...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCATCACTAGGTGGTCTTaGCTGAAGAGTTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLITRWS*LKSLCN
Trigger: GTTGCACAAACTCTTCAGCCAAGACCACCTAGTGAT...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGATTTTGATCTCTATTaGCTAGTGGCTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFDFDLY*LVAEIS
Trigger: GGAAATTTCAGCCACTAGTCAATAGAGATCAAAATC...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCTTCTGTCTCCATCCATaGATTATCAGTGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLFCLHP*IISVSR
Trigger: CCTCGAAACACTGATAATGCATGGATGGAGACAGAA...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTTTATATATCACTAGGTaGTCTTGGCTGAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFLYITR*SWLKSL
Trigger: CAAACTCTTCAGCCAAGACCACCTAGTGATATATAA...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGAGAACATGCAGTGTTTaGTTTTCTGTTCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: INSVILPSFQYMLLCGPLRTCSV*FSVLAL
Trigger: TAATGCAAGAACAGAAAACCAAACACTGCATGTTCT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR TCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCTTTTCTGTAAGGAGTTaGGAGCTTCCTCACCAAATT +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLFSVRS*ELPHQI
Trigger: AATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAA...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR GCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCTTCCCAGAAACAGGATaGATGATTTTATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLFPETG*MILFPL
Trigger: CAGTGGAAATAAAATCATGCATCCTGTTTCTGGGAA...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCTTCTCATTAGGAACCTaGCTTCGTTCAACTTTTGAA +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLFSLGT*LRSTFE
Trigger: TTCAAAAGTTGAACGAAGCCAGGTTCCTAATGAGAA...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CCA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCTTATATATCACTAGGTaGTCTTGGCTGAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLLYITR*SWLKSL
Trigger: CAAACTCTTCAGCCAAGACCACCTAGTGATATATAA...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS TCA 90 bp CCGCCTCCCCACACCCCACAGCTCCGAGTCCCGGCCGCGGGTATCTaGTGGGCACTAGGACCTGTCTGCCGTTGGGTTCCCGAACGGGAG +
Preference number: 5 (lower is better)
Translates to: PPPHTPQLRVPAAGI*WALGPVCRWVPERE
Trigger: CTCCCGTTCGGGAACCCAACGGCAGACAGGTCCTAGTGCCCATCAGATACCCGCGGCCGGGACTCGGAGCTGTGGGGTGTGGGGAGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302174.9
ENST00000514227.1
ENST00000514345.1
CDS GCA 90 bp CAGATCAAGAGCCCTCCCACGATAAGAGTCCACCGCTTTCCCCAGTaGATCGAGAAAAATCCAGACCAGCACGTGACGCCGAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: QIKSPPTIRVHRFPQ*IEKNPDQHVTPKPP
Trigger: TGGAGGCTTCGGCGTCACGTGCTGGTCTGGATTTTTCTCGATGCACTGGGGAAAGCGGTGGACTCTTATCGTGGGAGGGCTCTTGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000514345.1
CDS CCA 90 bp CTCTGTGGGCCTTTGGCTTACACGGAGACCATCAGCTACAACGCATaGCAGTCAGCTTCAGAGTCCTCGCTCCAGTGTGCATCTCGTTTC +
Preference number: 5 (lower is better)
Translates to: LCGPLAYTETISYNA*QSASESSLQCASRF
Trigger: GAAACGAGATGCACACTGGAGCGAGGACTCTGAAGCTGACTGCCATGCGTTGTAGCTGATGGTCTCCGTGTAAGCCAAAGGCCCACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS GCA 90 bp CCTGATCTGAGGATCTGCCCACCTGGGTCCAGCCAAGACAGAGACTaGAGTGTATTCCACAGGCTTATAGTCTTGCCACTCAACAAGCCA +
Preference number: 5 (lower is better)
Translates to: PDLRICPPGSSQDRD*SVFHRLIVLPLNKP
Trigger: TGGCTTGTTGAGTGGCAAGACTATAAGCCTGTGGAATACACTGCAGTCTCTGTCTTGGCTGGACCCAGGTGGGCAGATCCTCAGATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514345.1
CDS GCA 90 bp ACTGATCTGAGGATCTGCCCACCTGGGTCCAGCCAAGACAGAGACTaGAGTGTATTCCACAGGCTTATAGTCTTGCCACTCAACAAGCCA +
Preference number: 5 (lower is better)
Translates to: TDLRICPPGSSQDRD*SVFHRLIVLPLNKP
Trigger: TGGCTTGTTGAGTGGCAAGACTATAAGCCTGTGGAATACACTGCAGTCTCTGTCTTGGCTGGACCCAGGTGGGCAGATCCTCAGATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302174.9
ENST00000473942.5
ENST00000512216.5
CDS GCA 90 bp TCTGATCTGAGGATCTGCCCACCTGGGTCCAGCCAAGACAGAGACTaGAGTGTATTCCACAGGCTTATAGTCTTGCCACTCAACAAGCCA +
Preference number: 5 (lower is better)
Translates to: SDLRICPPGSSQDRD*SVFHRLIVLPLNKP
Trigger: TGGCTTGTTGAGTGGCAAGACTATAAGCCTGTGGAATACACTGCAGTCTCTGTCTTGGCTGGACCCAGGTGGGCAGATCCTCAGATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440591.6
CDS-3UTR CAA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACGATCTGCAGCGTGATTaGGGCCCCATCGCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYDLQRD*GPIAPK
Trigger: TTTTGGGGCGATGGGGCCCAAATCACGCTGCAGATC...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGAGGACCTGTCTGCCGTaGGGTTCCCGAACGGGAGTA +
Preference number: 5 (lower is better)
Translates to: INSVILPSFQYMLLCGPLRTCLP*GSRTGV
Trigger: TACTCCCGTTCGGGAACCCAACGGCAGACAGGTCCT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302174.9
CDS-3UTR CAA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGTCTTGGCTGAAGAGTTaGTGCAACTTTTCCTCTATT +
Preference number: 5 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRSWLKS*CNFSSI
Trigger: AATAGAGGAAAAGTTGCACAAACTCTTCAGCCAAGA...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGCACAAGTTTGATGAATaGAGAGTGACTGGCATAAAG +
Preference number: 5 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRHKFDE*RVTGIK
Trigger: CTTTATGCCAGTCACTCTCAATTCATCAAACTTGTG...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGCTCCTCTGTGGGCCTTaGGCTTACACGGAGACCATC +
Preference number: 5 (lower is better)
Translates to: INSVILPSFQYMLLCGPLLLCGP*AYTETI
Trigger: GATGGTCTCCGTGTAAGCCAAAGGCCCACAGAGGAG...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp CCAGTGGCGGTACTCTGCCTAAAGGAGTTTGATGTGGCAGGAACATCCTTCAGGGAGAACATGCAGTGTTaGGTTTTCTGTTCTTGCATT +
Preference number: 5 (lower is better)
Translates to: PVAVLCLKEFDVAGTSFRENMQC*VFCSCI
Trigger: AATGCAAGAACAGAAAACCAAACACTGCATGTTCTC...CCTGAAGGATGTTCCTGCCACATCAAACTCCTTTAGGCAGAGTACCGCCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS CCA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTaGGCCTTTGGCTTACACGGAGACCATCAGCTACAACGCATGGCA +
Preference number: 5 (lower is better)
Translates to: YKFCDTAFFSVYAPL*AFGLHGDHQLQRMA
Trigger: TGCCATGCGTTGTAGCTGATGGTCTCCGTGTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGCTTACTCATACAGGCCATTCTaGCTCTTTCTCTCAACATGC +
Preference number: 5 (lower is better)
Translates to: SVILPSFQYMLLCGPLAYSYRPF*LFLSTC
Trigger: GCATGTTGAGAGAAAGAGCAAGAATGGCCTGTATGA...GTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGAGACCCCAGAATGTGTaGTTCCCATGTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: INSVILPSFQYMLLCGPLRPQNV*FPCPCV
Trigger: AACACATGGACATGGGAACAACACATTCTGGGGTCT...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCCACAGGCTTATAGTCTaGCCACTCAACAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLHRLIV*PLNKPA
Trigger: GGCTGGCTTGTTGAGTGGCAAGACTATAAGCCTGTG...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGTCATACAGGCCATTCTaGCTCTTTCTCTCAACATGC +
Preference number: 5 (lower is better)
Translates to: INSVILPSFQYMLLCGPLSYRPF*LFLSTC
Trigger: GCATGTTGAGAGAAAGAGCAAGAATGGCCTGTATGA...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp TTCACAGCTTCTGTCTCCATCCATGCATTATCAGTGTTTCGAGGATCATCAACAGTTTTCTGTAAGGAGTaGAGAGCTTCCTCACCAAAT +
Preference number: 5 (lower is better)
Translates to: FTASVSIHALSVFRGSSTVFCKE*RASSPN
Trigger: ATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAAC...TGTTGATGATCCTCGAAACACTGATAATGCATGGATGGAGACAGAAGCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502933.1
CDS-3UTR CAA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGTTTTCTGTAAGGAGTaGAGAGCTTCCTCACCAAAT +
Preference number: 5 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFVFCKE*RASSPN
Trigger: ATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAAC...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp ATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTGGAGAACATGCAGTGTTaGGTTTTCTGTTCTTGCATT +
Preference number: 5 (lower is better)
Translates to: INSVILPSFQYMLLCGPLENMQC*VFCSCI
Trigger: AATGCAAGAACAGAAAACCAAACACTGCATGTTCTC...CAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp AATGGGATTACTGGGTCAAATATCTTTAAATATTTGAGGACTCTCTACACTCTCAGACCCCAGAATGTGTaGTTCCCATGTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: NGITGSNIFKYLRTLYTLRPQNV*FPCPCV
Trigger: AACACATGGACATGGGAACAACACATTCTGGGGTCT...GAGAGTGTAGAGAGTCCTCAAATATTTAAAGATATTTGACCCAGTAATCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp TATAAATTCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTCACAAGTTTGATGAATaGAGAGTGACTGGCATAAAG +
Preference number: 5 (lower is better)
Translates to: YKFCDTAFFSVYAPLWAFHKFDE*RVTGIK
Trigger: CTTTATGCCAGTCACTCTCAATTCATCAAACTTGTG...AAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGAATTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGGTTTTCTGTAAGGAGTaGAGAGCTTCCTCACCAAAT +
Preference number: 5 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLVFCKE*RASSPN
Trigger: ATTTGGTGAGGAAGCTCTCAACTCCTTACAGAAAAC...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS-3UTR CAA 90 bp TCCAGTTCATCTTACTCATGTTATTCTGATGCGAAACACTCTAAATGCAAATTGTCTTGGCTGAAGAGTTaGTGCAACTTTTCCTCTATT +
Preference number: 5 (lower is better)
Translates to: SSSSYSCYSDAKHSKCKLSWLKS*CNFSSI
Trigger: AATAGAGGAAAAGTTGCACAAACTCTTCAGCCAAGA...CAATTTGCATTTAGAGTGTTTCGCATCAGAATAACATGAGTAAGATGAACTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS TCA 72 bp CCGCGGCTAAAGCCTTTCCCAGGAGGCGTCCCGCCATaGGCGCCCCGAGGGCGGCTTTGCGATGCTAGGTCG +
Preference number: 6 (lower is better)
Translates to: PRLKPFPGGVPP*APRGRLCDARS
Trigger: CGACCTAGCATCGCAAAGCCGCCCTCGGGGCGCTCATGGCGGGACGCCTCCTGGGAAAGGCTTTAGCCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302174.9
ENST00000440591.6
ENST00000514227.1
ENST00000514345.1
CDS TCA 72 bp CACACCCCACAGCTCCGAGTCCCGGCCGCGGGTATCTaGTGGGCACTAGGACCTGTCTGCCGTTGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: HTPQLRVPAAGI*WALGPVCRWVP
Trigger: GGGAACCCAACGGCAGACAGGTCCTAGTGCCCATCAGATACCCGCGGCCGGGACTCGGAGCTGTGGGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302174.9
ENST00000514227.1
ENST00000514345.1
CDS CCA 72 bp CAGCACGTGACGCCGAAGCCTCCAGCGCCAGCTGCCTaGGGAAACCGCGGCCACGAACCTCGTAACTTTCTC +
Preference number: 6 (lower is better)
Translates to: QHVTPKPPAPAA*GNRGHEPRNFL
Trigger: GAGAAAGTTACGAGGTTCGTGGCCGCGGTTTCCCCAGGCAGCTGGCGCTGGAGGCTTCGGCGTCACGTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302174.9
ENST00000473942.5
ENST00000514345.1
CDS CAA 90 bp AGTCCCGGCCGCGGGTATCTGATGGGCACTAGGACCTGTCTGCCGTaGGGTTCCCGAACGGGAGTAGCTGTGCCTATCTATAAATCACAG +
Preference number: 6 (lower is better)
Translates to: SPGRGYLMGTRTCLP*GSRTGVAVPIYKSQ
Trigger: CTGTGATTTATAGATAGGCACAGCTACTCCCGTTCGGGAACCCAACGGCAGACAGGTCCTAGTGCCCATCAGATACCCGCGGCCGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302174.9
ENST00000514227.1
ENST00000514345.1
CDS GCA 72 bp AGCCCTCCCACGATAAGAGTCCACCGCTTTCCCCAGTaGATCGAGAAAAATCCAGACCAGCACGTGACGCCG +
Preference number: 6 (lower is better)
Translates to: SPPTIRVHRFPQ*IEKNPDQHVTP
Trigger: CGGCGTCACGTGCTGGTCTGGATTTTTCTCGATGCACTGGGGAAAGCGGTGGACTCTTATCGTGGGAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000514345.1
CDS CAA 72 bp CGCGGGTATCTGATGGGCACTAGGACCTGTCTGCCGTaGGGTTCCCGAACGGGAGTAGCTGTGCCTATCTAT +
Preference number: 6 (lower is better)
Translates to: RGYLMGTRTCLP*GSRTGVAVPIY
Trigger: ATAGATAGGCACAGCTACTCCCGTTCGGGAACCCAACGGCAGACAGGTCCTAGTGCCCATCAGATACCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302174.9
ENST00000514227.1
ENST00000514345.1
CDS CCA 72 bp CCTTTGGCTTACACGGAGACCATCAGCTACAACGCATaGCAGTCAGCTTCAGAGTCCTCGCTCCAGTGTGCA +
Preference number: 6 (lower is better)
Translates to: PLAYTETISYNA*QSASESSLQCA
Trigger: TGCACACTGGAGCGAGGACTCTGAAGCTGACTGCCATGCGTTGTAGCTGATGGTCTCCGTGTAAGCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS CCA 72 bp TGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTTaGCTTACACGGAGACCATCAGCTACAACGCATGGC +
Preference number: 6 (lower is better)
Translates to: CLLFSICSSVGL*LTRRPSATTHG
Trigger: GCCATGCGTTGTAGCTGATGGTCTCCGTGTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS CAA 72 bp CTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTaGGCTTACACGGAGACCATCAGCTACAACGCATGG +
Preference number: 6 (lower is better)
Translates to: LPSFQYMLLCGP*AYTETISYNAW
Trigger: CCATGCGTTGTAGCTGATGGTCTCCGTGTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS CAA 90 bp TCTGTGATACTGCCTTCTTTTCAGTATATGCTCCTCTGTGGGCCTTaGGCTTACACGGAGACCATCAGCTACAACGCATGGCAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: SVILPSFQYMLLCGP*AYTETISYNAWQSA
Trigger: AGCTGACTGCCATGCGTTGTAGCTGATGGTCTCCGTGTAAGCCAAAGGCCCACAGAGGAGCATATACTGAAAAGAAGGCAGTATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302174.9
ENST00000473942.5
CDS CCA 72 bp CACTCAACAAGCCAGCCCACTTTCTCATTAGGAACCTaGCTTCGTTCAACTTTTGAACCTGAACGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: HSTSQPTFSLGT*LRSTFEPERLD
Trigger: ATCCAGGCGTTCAGGTTCAAAAGTTGAACGAAGCCAGGTTCCTAATGAGAAAGTGGGCTGGCTTGTTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514345.1