RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000173598

Ensembl transcript IDs: ENST00000337179.9, ENST00000415493.7, ENST00000546925.1, ENST00000547014.5, ENST00000548662.5, ENST00000549992.5, ENST00000550056.5

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGTCTCCCCGGCCCTCTCCCAGTTTCATCTTGTCACCCTTGAGCTaGTCTCATTTCATGTGTCTTGTATGGCCCTGCTGGGTGGCACTG +
Preference number: 1 (lower is better)
Translates to: GSPRPSPSFILSPLS*SHFMCLVWPCWVAL
Trigger: CAGTGCCACCCAGCAGGGCCATACAAGACACATGAAATGAGATCAGCTCAAGGGTGACAAGATGAAACTGGGAGAGGGCCGGGGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 90 bp GGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGAAGAAAAGAATCTaGACATTAAGTGGCTTCCTGAAAATCGACTGCCCAGGCCGGGCA +
Preference number: 1 (lower is better)
Translates to: GNSSICKVLGEKKRI*TLSGFLKIDCPGRA
Trigger: TGCCCGGCCTGGGCAGTCGATTTTCAGGAAGCCACTTAATGTTCAGATTCTTTTCTTCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 90 bp TGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATaGACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTG +
Preference number: 1 (lower is better)
Translates to: WKREVTWTDFWIQAR*TSPGRGNSSICKVL
Trigger: CAGGACTTTGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR GCA 90 bp TCCTTTGCAGTTTTGGTAAGACTCCCCCATTACTTTGCTAAGACTTaGTTTCTCAACCAGTGGGATGAAACGAGTGCCAGTGTGTTGACT +
Preference number: 1 (lower is better)
Translates to: SFAVLVRLPHYFAKT*FLNQWDETSASVLT
Trigger: AGTCAACACACTGGCACTCGTTTCATCCCACTGGTTGAGAAAGCAAGTCTTAGCAAAGTAATGGGGGAGTCTTACCAAAACTGCAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 90 bp CACACATATTTGACCATAGCTTGGTTGTGCAACTTGTCCATTTGTTaGCTAGACTCCCAGGAGTGGAACTGTTGGGTGAAAGGGTATGTA +
Preference number: 1 (lower is better)
Translates to: HTYLTIAWLCNLSIC*LDSQEWNCWVKGYV
Trigger: TACATACCCTTTCACCCAACAGTTCCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTTGCACAACCAAGCTATGGTCAAATATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 90 bp CACTCATCTCCATTTTATCGTGGAAGTCAGGTATATTCCAAGAGTTaGCTTTATGGTACTAACTTGCCATTAGCTGCCATGCTGGGAGCT +
Preference number: 1 (lower is better)
Translates to: HSSPFYRGSQVYSKS*LYGTNLPLAAMLGA
Trigger: AGCTCCCAGCATGGCAGCTAATGGCAAGTTAGTACCATAAAGCCAACTCTTGGAATATACCTGACTTCCACGATAAAATGGAGATGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 90 bp CATACAAATGTACCGCTAGGAAGAGGTAACGTATATGATCATCAATaGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTT +
Preference number: 1 (lower is better)
Translates to: HTNVPLGRGNVYDHQ*ENSKGVTVEFPTGF
Trigger: AAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGATCATATACGTTACCTCTTCCTAGCGGTACATTTGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 90 bp CACAAGTTTAAACAACCCAGGGTAAGCACACAATGCACTATGCACTaGAAGGTATACGTTTCCGCTGGGTGTTTATACATTTCAAAGTTA +
Preference number: 1 (lower is better)
Translates to: HKFKQPRVSTQCTMH*KVYVSAGCLYISKL
Trigger: TAACTTTGAAATGTATAAACACCCAGCGGAAACGTATACCTTTCAGTGCATAGTGCATTGTGTGCTTACCCTGGGTTGTTTAAACTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 90 bp ATCAAGGTGGAAGAATTAGAGAATAGTTCCCTGGCTAGAAGACGTTaGACCTTTGAGTGTTTAGGTCTTTGCTATAATGTCTTGCTTGCT +
Preference number: 1 (lower is better)
Translates to: IKVEELENSSLARRR*TFECLGLCYNVLLA
Trigger: AGCAAGCAAGACATTATAGCAAAGACCTAAACACTCAAAGGTTCAACGTCTTCTAGCCAGGGAACTATTCTCTAATTCTTCCACCTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR GCA 90 bp CGGGAACTGGTTCTAGGACTTCCTTTGGATATCCAAATTCGCAGATaGTCAAGTCTCTGGAATAAAATGATGTTGTATATGCATACAATC +
Preference number: 1 (lower is better)
Translates to: RELVLGLPLDIQIRR*SSLWNKMMLYMHTI
Trigger: GATTGTATGCATATACAACATCATTTTATTCCAGAGACTTGAGCATCTGCGAATTTGGATATCCAAAGGAAGTCCTAGAACCAGTTCCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 90 bp GGTAAGCACACAATGCACTATGCACTGAAAGGTATACGTTTCCGCTaGGTGTTTATACATTTCAAAGTTAAAAGCATACACCTTACCCAA +
Preference number: 1 (lower is better)
Translates to: GKHTMHYALKGIRFR*VFIHFKVKSIHLTQ
Trigger: TTGGGTAAGGTGTATGCTTTTAACTTTGAAATGTATAAACACCCAGCGGAAACGTATACCTTTCAGTGCATAGTGCATTGTGTGCTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 90 bp CTAGGACTTCCTTTGGATATCCAAATTCGCAGATGCTCAAGTCTCTaGAATAAAATGATGTTGTATATGCATACAATCTACACAAATCCT +
Preference number: 1 (lower is better)
Translates to: LGLPLDIQIRRCSSL*NKMMLYMHTIYTNP
Trigger: AGGATTTGTGTAGATTGTATGCATATACAACATCATTTTATTCCAGAGACTTGAGCATCTGCGAATTTGGATATCCAAAGGAAGTCCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTATGGTCTCCATCTCCTaGCCTCGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPMVSIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAGGAGATGGAGACCAT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAATTAGCCGGGCGTGGTaGCAGGCGCCTGTGATCCCA +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQISRAW*QAPVIP
Trigger: TGGGATCACAGGCGCCTGCCACCACGCCCGGCTAAT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAACTTGTCCATTTGTTaGCTAGACTCCCAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPNLSIC*LDSQEW
Trigger: CCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGGCAGGAGAATCGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCGRRIA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCGGCAGGAGAATCGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPGRRIA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCC...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGCTGCGATTTGCTTCTaGTCTAGTTATCCTTCATCC +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPAAICF*SSYPSS
Trigger: GGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGTAAAGGTGTTACTGTaGAATTCCCGACAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPVKVLL*NSRQAF
Trigger: GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTAC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCATTAGCCGGGCGTGGTaGCAGGCGCCTGTGATCCCA +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATISRAW*QAPVIP
Trigger: TGGGATCACAGGCGCCTGCCACCACGCCCGGCTAAT...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAAAATTAGCCGGGCGTaGTGGCAGGCGCCTGTGATC +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQKISRA*WQAPVI
Trigger: GATCACAGGCGCCTGCCACCACGCCCGGCTAATTTT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCGGCGGGTGGGGCGGTaGCTTAGCCAGTTATGCTTT +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPRRVGR*LSQLCF
Trigger: AAAGCATAACTGGCTAAGTCACCGCCCCACCCGCCG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCTATACACTCACCCCTaGACTCATCTCCATTTTATC +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPLYTHP*THLHFI
Trigger: GATAAAATGGAGATGAGTGCAGGGGTGAGTGTATAG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTACTTCGCTGCGATTTaGTTCTGCTCTAGTTATCCT +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPYFAAI*FCSSYP
Trigger: AGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTCGGCGGGTGGGGCGGTaGCTTAGCCAGTTATGCTTT +
Preference number: 2 (lower is better)
Translates to: IFHLATWHATHLRELYEGRRVGR*LSQLCF
Trigger: AAAGCATAACTGGCTAAGTCACCGCCCCACCCGCCG...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTCTTATACTCCAATGTaGAGACAACATTGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPSYTPM*RQHWKG
Trigger: CCCTTTCCAATGTTGTCTTCACATTGGAGTATAAGA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATGTCTTGTATGGCCCTaGTGGGTGGCACTGGTAAGT +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQCLVWP*WVALVS
Trigger: ACTTACCAGTGCCACCCAGCAGGGCCATACAAGACA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAGTAAAGTCATCTCTTaGTATTTGTCGGGAACTGGT +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPSKVIS*YLSGTG
Trigger: ACCAGTTCCCGACAAATACCAAGAGATGACTTTACT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGAGGCGGAGGTTGCGGTaGGTTGAGATTGTGCCATTG +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLRRRLR*VEIVPL
Trigger: CAATGGCACAATCTCAACTCACCGCAACCTCCGCCT...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAGGCGGAGGTTGCGGTaGGTTGAGATTGTGCCATTG +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPRRRLR*VEIVPL
Trigger: CAATGGCACAATCTCAACTCACCGCAACCTCCGCCT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCAAATCCTTTGCTGCTaGGCATTTTATTTTAATGGC +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPQILCC*AFYFNG
Trigger: GCCATTAAAATAAAATGCTCAGCAGCAAAGGATTTG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGATGATCTTGGCTCACTaGAGGTTCTGCCTCCCGCGT +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLMILAH*RFCLPR
Trigger: ACGCGGGAGGCAGAACCTGCAGTGAGCCAAGATCAT...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAAAATTAGCCAGGCATaGAGGCAGGCGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQKISQA*RQAPVI
Trigger: GATTACAGGCGCCTGCCTCCATGCCTGGCTAATTTT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTAAAATTAGCCGGGCGTaGTGGCAGGCGCCTGTGATC +
Preference number: 2 (lower is better)
Translates to: IFHLATWHATHLRELYEGKISRA*WQAPVI
Trigger: GATCACAGGCGCCTGCCACCACGCCCGGCTAATTTT...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTGGGAGTCTACATATTaGGAGATGTTTGTCAAATGT +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPWESTY*EMFVKC
Trigger: ACATTTGACAAACATCTCCCAATATGTAGACTCCCA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCCGTACAAACAGGCAGTaGGGTGGGGTTTGGCCTGTA +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATRTNRQ*GGVWPV
Trigger: TACAGGCCAAACCCCACCCCACTGCCTGTTTGTACG...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGGGGTTTCACCATGTTaGGCCAGGATGGTCTCCATC +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLGVSPC*ARMVSI
Trigger: GATGGAGACCATCCTGGCCCAACATGGTGAAACCCC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAAAGTTTCAGAAACCTaGTTTGCAAATCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPKVSET*FANLSS
Trigger: TGAACTCAGATTTGCAAACCAGGTTTCTGAAACTTT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCTAGACTCCCAGGAGTaGAACTGTTGGGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPLDSQE*NCWVKG
Trigger: CCCTTTCACCCAACAGTTCCACTCCTGGGAGTCTAG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCTAGACTCCCAGGAGTaGAACTGTTGGGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLDSQE*NCWVKG
Trigger: CCCTTTCACCCAACAGTTCCACTCCTGGGAGTCTAG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGCTTGTATGGCCCTGCTaGGTGGCACTGGTAAGTGTA +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLLVWPC*VALVSV
Trigger: TACACTTACCAGTGCCACCCAGCAGGGCCATACAAG...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 90 bp ACACACATATTTGACCATAGCTTGGTTGTGCAACTTGTCCATTTGTaGACTAGACTCCCAGGAGTGGAACTGTTGGGTGAAAGGGTATGT +
Preference number: 2 (lower is better)
Translates to: THIFDHSLVVQLVHL*TRLPGVELLGERVC
Trigger: ACATACCCTTTCACCCAACAGTTCCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTTGCACAACCAAGCTATGGTCAAATATGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 90 bp ACAACACACATATTTGACCATAGCTTGGTTGTGCAACTTGTCCATTaGTTGACTAGACTCCCAGGAGTGGAACTGTTGGGTGAAAGGGTA +
Preference number: 2 (lower is better)
Translates to: TTHIFDHSLVVQLVH*LTRLPGVELLGERV
Trigger: TACCCTTTCACCCAACAGTTCCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTTGCACAACCAAGCTATGGTCAAATATGTGTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGGGCCAAGTTTCTCATaGCCTCCAACTAAGAAACCC +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLGPSFS*PPTKKP
Trigger: GGGTTTCTTAGTTGGAGGGCATGAGAAACTTGGCCC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGATGCTTAAAAAGACCTaGAGGCCAGACGAGGTGGCT +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLMLKKT*RPDEVA
Trigger: AGCCACCTCGTCTGGCCTGCAGGTCTTTTTAAGCAT...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTATGCTTAAAAAGACCTaGAGGCCAGACGAGGTGGCT +
Preference number: 2 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCMLKKT*RPDEVA
Trigger: AGCCACCTCGTCTGGCCTGCAGGTCTTTTTAAGCAT...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAAAATTAGCCAGGCATaGAGGCAGGCGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPKISQA*RQAPVI
Trigger: GATTACAGGCGCCTGCCTCCATGCCTGGCTAATTTT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATTAGCATCAGGAGAGTaGGAGTCTACATATTGGGAG +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQLASGE*ESTYWE
Trigger: CTCCCAATATGTAGACTCCCACTCTCCTGATGCTAA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGTTTACAAAGTCTCCTaGCTTAAGGTCGGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQVYKVS*LKVGSR
Trigger: TCTACTCCCGACCTTAAGCCAGGAGACTTTGTAAAC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 90 bp GGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTaGGACAGACTTTTGGATTCAGGCCAGATGAACATCTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: GQTNSCNSVMEKRSN*DRLLDSGQMNISRQ
Trigger: CTGCCTGGAGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAACTTGTCCATTTGTTaGCTAGACTCCCAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPNLSIC*LDSQEW
Trigger: CCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATTGTCACCCTTGAGCTaGTCTCATTTCATGTGTCTT +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQLSPLS*SHFMCL
Trigger: AAGACACATGAAATGAGATCAGCTCAAGGGTGACAA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGCTGGCTAGAAGACGTTaGACCTTTGAGTGTTTAGGT +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLLARRR*TFECLG
Trigger: ACCTAAACACTCAAAGGTTCAACGTCTTCTAGCCAG...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGTAAAGGTGTTACTGTaGAATTCCCGACAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATVKVLL*NSRQAF
Trigger: GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTAC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATCTACAGTTGGTCTTTaGCAGCAGTATGTTTTAGGA +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQSTVGL*QQYVLG
Trigger: TCCTAAAACATACTGCTGCCAAAGACCAACTGTAGA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCTAGAATTTAGCCAGTaGCACCAGTCAGGAAGGTAT +
Preference number: 2 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLEFSQ*HQSGRY
Trigger: ATACCTTCCTGACTGGTGCCACTGGCTAAATTCTAG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTTAGCATCAGGAGAGTaGGAGTCTACATATTGGGAG +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATLASGE*ESTYWE
Trigger: CTCCCAATATGTAGACTCCCACTCTCCTGATGCTAA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGTTTACAAAGTCTCCTaGCTTAAGGTCGGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATVYKVS*LKVGSR
Trigger: TCTACTCCCGACCTTAAGCCAGGAGACTTTGTAAAC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTTTTTCAATCACTATTaGAAGGACTCCCTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATFFNHY*KDSLWQ
Trigger: CTGCCACAGGGAGTCCTTTCAATAGTGATTGAAAAA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCCTGATTGCACTAGATTaGACTTGGTGCTGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATLIALD*TWCCFS
Trigger: AGAGAAACAGCACCAAGTTCAATCTAGTGCAATCAG...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTTCAGAAACCTGGTTTaGAAATCTGAGTTCATGTGT +
Preference number: 2 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFFRNLV*KSEFMC
Trigger: ACACATGAACTCAGATTTGCAAACCAGGTTTCTGAA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATCAACTACTGAATTCTaGCATTGTAGTGAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQSTTEF*HCSEKA
Trigger: TGCTTTCTCACTACAATGGCAGAATTCAGTAGTTGA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGGTATACGTTTCCGCTaGGTGTTTATACATTTCAAA +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQGIRFR*VFIHFK
Trigger: TTTGAAATGTATAAACACCCAGCGGAAACGTATACC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAGTAGATATCAGATCTaGCAAAAGCAGCTTAGATGT +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQSRYQI*QKQLRC
Trigger: ACATCTAAGCTGCTTTTGCCAGATCTGATATCTACT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTCTTATACTCCAATGTaGAGACAACATTGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCSYTPM*RQHWKG
Trigger: CCCTTTCCAATGTTGTCTTCACATTGGAGTATAAGA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTAAGACGTTGAACCTTTaGGTGTTTAGGTCTTTGCTA +
Preference number: 2 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCKTLNL*VFRSLL
Trigger: TAGCAAAGACCTAAACACTCAAAGGTTCAACGTCTT...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGCCTCATTTTTCTGTTaGATGGTTCAGGAACCTTTT +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLASFFC*MVQEPF
Trigger: AAAAGGTTCCTGAACCATTCAACAGAAAAATGAGGC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCGCACACAATGCACTATaGACTGAAAGGTATACGTTT +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPAHNAL*TERYTF
Trigger: AAACGTATACCTTTCAGTGCATAGTGCATTGTGTGC...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGCACACAATGCACTATaGACTGAAAGGTATACGTTT +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATAHNAL*TERYTF
Trigger: AAACGTATACCTTTCAGTGCATAGTGCATTGTGTGC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATGTCTAGTAGTGTTCTaGCTTTTTCAATCACTATTG +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQCLVVF*LFQSLL
Trigger: CAATAGTGATTGAAAAAGGCAGAACACTACTAGACA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTTGTAGTTCTCTGCCCTaGTCATGTCTATTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: IFHLATWHATHLRELYEGCSSLP*SCLFPK
Trigger: TTTGGGAAATAGACATGAGCAGGGCAGAGAACTACA...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGATAAAAGTCACAGGTaGTATGGTTGTTTGATGGAG +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLDKSHR*YGCLME
Trigger: CTCCATCAAACAACCATAGCACCTGTGACTTTTATC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAAAGTTTCAGAAACCTaGTTTGCAAATCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQKVSET*FANLSS
Trigger: TGAACTCAGATTTGCAAACCAGGTTTCTGAAACTTT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCTCTACAGTTGGTCTTTaGCAGCAGTATGTTTTAGGA +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPSTVGL*QQYVLG
Trigger: TCCTAAAACATACTGCTGCCAAAGACCAACTGTAGA...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCCATAAAATGTGCATTTaGTGGGGGAAATCACGTCTA +
Preference number: 2 (lower is better)
Translates to: NKYFWAGMIFHLATWHATHKMCI*WGKSRL
Trigger: TAGACGTGATTTCCCCCACCAAATGCACATTTTATG...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCATAAAATGTGCATTTaGTGGGGGAAATCACGTCTA +
Preference number: 2 (lower is better)
Translates to: VVLSSSVLPFSITIERTPHKMCI*WGKSRL
Trigger: TAGACGTGATTTCCCCCACCAAATGCACATTTTATG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAATCTCCATTTTATCGTaGAAGTCAGGTATATTCCAA +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQISILS*KSGIFQ
Trigger: TTGGAATATACCTGACTTCCACGATAAAATGGAGAT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATCGAATAAGTACTTTTaGGCTGGGATGATATTTCAT +
Preference number: 2 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQSNKYF*AGMIFH
Trigger: ATGAAATATCATCCCAGCCCAAAAGTACTTATTCGA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCCAATGCACTATGCACTaGAAGGTATACGTTTCCGCT +
Preference number: 2 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIQCTMH*KVYVSA
Trigger: AGCGGAAACGTATACCTTTCAGTGCATAGTGCATTG...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGAGTGTTTAGGTCTTTaGTATAATGTCTTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCECLGL*YNVLLA
Trigger: AGCAAGCAAGACATTATAGCAAAGACCTAAACACTC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGTCAACTACTGAATTCTaGCATTGTAGTGAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLSTTEF*HCSEKA
Trigger: TGCTTTCTCACTACAATGGCAGAATTCAGTAGTTGA...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTAAAATGTGCATTTGGTaGGGGAAATCACGTCTACAA +
Preference number: 2 (lower is better)
Translates to: IFHLATWHATHLRELYEGKMCIW*GKSRLQ
Trigger: TTGTAGACGTGATTTCCCCCACCAAATGCACATTTT...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCCTAGAATTTAGCCAGTaGCACCAGTCAGGAAGGTAT +
Preference number: 2 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSILEFSQ*HQSGRY
Trigger: ATACCTTCCTGACTGGTGCCACTGGCTAAATTCTAG...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGTGGGAGTCTACATATTaGGAGATGTTTGTCAAATGT +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLWESTY*EMFVKC
Trigger: ACATTTGACAAACATCTCCCAATATGTAGACTCCCA...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGAGTGTTTAGGTCTTTaGTATAATGTCTTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: IFHLATWHATHLRELYEGECLGL*YNVLLA
Trigger: AGCAAGCAAGACATTATAGCAAAGACCTAAACACTC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGTGAAAGGGTATGTATaGAGCTGTGATAAAATACTA +
Preference number: 2 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCVKGYV*SCDKIL
Trigger: TAGTATTTTATCACAGCTGCATACATACCCTTTCAC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGTTGGAATATTTTGTCTaGTTGTTTGAATCCACGGAA +
Preference number: 2 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLLEYFV*LFESTE
Trigger: TTCCGTGGATTCAAACAACCAGACAAAATATTCCAA...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR TCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCAAGACGTTGAACCTTTaGGTGTTTAGGTCTTTGCTA +
Preference number: 2 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIKTLNL*VFRSLL
Trigger: TAGCAAAGACCTAAACACTCAAAGGTTCAACGTCTT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGTGAAAGGGTATGTATaGAGCTGTGATAAAATACTA +
Preference number: 2 (lower is better)
Translates to: IFHLATWHATHLRELYEGVKGYV*SCDKIL
Trigger: TAGTATTTTATCACAGCTGCATACATACCCTTTCAC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGTATATGATCATCAATaGGAGAACAGTAAAGGTGTT +
Preference number: 2 (lower is better)
Translates to: IFHLATWHATHLRELYEGVYDHQ*ENSKGV
Trigger: AACACCTTTACTGTTCTCCCATTGATGATCATATAC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCAAAATGTGCATTTGGTaGGGGAAATCACGTCTACAA +
Preference number: 2 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIKMCIW*GKSRLQ
Trigger: TTGTAGACGTGATTTCCCCCACCAAATGCACATTTT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTCTGTCATCTACCACCTaGACTAGTAATATATTGTTT +
Preference number: 2 (lower is better)
Translates to: IFHLATWHATHLRELYEGLSSTT*TSNILF
Trigger: AAACAATATATTACTAGTCCAGGTGGTAGATGACAG...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 90 bp TGTCCTAAAAGACATTATAAACACAGTGACCTAAGTGGAACTAAATaGGATCGAGGAAATGATAGGAATAGGCCTCATTTTTCTGTTGAA +
Preference number: 2 (lower is better)
Translates to: CPKRHYKHSDLSGTK*DRGNDRNRPHFSVE
Trigger: TTCAACAGAAAAATGAGGCCTATTCCTATCATTTCCTCGATCCAATTTAGTTCCACTTAGGTCACTGTGTTTATAATGTCTTTTAGGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR GCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTTCAGAAACCTGGTTTaGAAATCTGAGTTCATGTGT +
Preference number: 2 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIFRNLV*KSEFMC
Trigger: ACACATGAACTCAGATTTGCAAACCAGGTTTCTGAA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 72 bp GAGGCCAAGGCAGCAGTTGAAAACTGCAGCTTCACCTaGCCTTTGGGCCTGTTTTCCCTGGCCCACACAGTG +
Preference number: 3 (lower is better)
Translates to: EAKAAVENCSFT*PLGLFSLAHTV
Trigger: CACTGTGTGGGCCAGGGAAAACAGGCCCAAAGGCCAGGTGAAGCTGCAGTTTTCAACTGCTGCCTTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 72 bp CTTGTTGGCCGTACAAACAGGCAGTGGGGTGGGGTTTaGCCTGTAGGTTGTAGTTCTCTGCCCTGCTCATGT +
Preference number: 3 (lower is better)
Translates to: LVGRTNRQWGGV*PVGCSSLPCSC
Trigger: ACATGAGCAGGGCAGAGAACTACAACCTACAGGCCAAACCCCACCCCACTGCCTGTTTGTACGGCCAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 72 bp CGGCCCTCTCCCAGTTTCATCTTGTCACCCTTGAGCTaGTCTCATTTCATGTGTCTTGTATGGCCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: RPSPSFILSPLS*SHFMCLVWPCW
Trigger: CCAGCAGGGCCATACAAGACACATGAAATGAGATCAGCTCAAGGGTGACAAGATGAAACTGGGAGAGGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 72 bp AGCATGTCATTGTCTTCTCACCAGTTACTCTCCAGTTaGCTAGAGTCCCCTCCGAGCACACCTGCTAGTCCT +
Preference number: 3 (lower is better)
Translates to: SMSLSSHQLLSS*LESPPSTPASP
Trigger: AGGACTAGCAGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAATGACATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCCGACAGGCTTTCACTaGGAGGGGGAATATTTGAAC +
Preference number: 3 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPPTGFH*EGEYLN
Trigger: GTTCAAATATTCCCCCTCCAAGTGAAAGCCTGTCGG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAGGCAGGAGAATCGCTaGAACCTGGCAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQRQENR*NLAGGG
Trigger: ACCTCCGCCTGCCAGGTTCAAGCGATTCTCCTGCCT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGCAGCACATAGCTCTTaGGTAACCACAAAGTATCCA +
Preference number: 3 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPAAHSS*VTTKYP
Trigger: TGGATACTTTGTGGTTACCAAAGAGCTATGTGCTGC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 72 bp GAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATaGACATCTCCAGGCAGAGGGAACAGCAGCATCTGC +
Preference number: 3 (lower is better)
Translates to: EVTWTDFWIQAR*TSPGRGNSSIC
Trigger: GCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGTGGGAGTCTACATATaGGGAGATGTTTGTCAAATG +
Preference number: 3 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPVGVYI*GDVCQM
Trigger: CATTTGACAAACATCTCCCAATATGTAGACTCCCAC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTGCACTAGATTGAACTaGGTGCTGTTTCTCTTAGGT +
Preference number: 3 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPCTRLN*VLFLLG
Trigger: ACCTAAGAGAAACAGCACCAAGTTCAATCTAGTGCA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTATTTTGTCTGGTTGTTaGAATCCACGGAAGTGGAAC +
Preference number: 3 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPILSGC*NPRKWN
Trigger: GTTCCACTTCCGTGGATTCAAACAACCAGACAAAAT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 72 bp CCCCATTACTTTGCTAAGACTTGCTTTCTCAACCAGTaGGATGAAACGAGTGCCAGTGTGTTGACTGAGCCT +
Preference number: 3 (lower is better)
Translates to: PHYFAKTCFLNQ*DETSASVLTEP
Trigger: AGGCTCAGTCAACACACTGGCACTCGTTTCATCCCACTGGTTGAGAAAGCAAGTCTTAGCAAAGTAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCTAAGTGGAACTAAATaGGATCGAGGAAATGATAGG +
Preference number: 3 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPLSGTK*DRGNDR
Trigger: CCTATCATTTCCTCGATCCAATTTAGTTCCACTTAG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGAATATTTTGTCTGGTaGTTTGAATCCACGGAAGTG +
Preference number: 3 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPEYFVW*FESTEV
Trigger: CACTTCCGTGGATTCAAACAACCAGACAAAATATTC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAACCGACAGGCTTTCACTaGGAGGGGGAATATTTGAAC +
Preference number: 3 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQPTGFH*EGEYLN
Trigger: GTTCAAATATTCCCCCTCCAAGTGAAAGCCTGTCGG...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAACCAGGAGTGGAACTGTaGGGTGAAAGGGTATGTATG +
Preference number: 3 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQPGVEL*GERVCM
Trigger: CATACATACCCTTTCACCCAACAGTTCCACTCCTGG...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR GCA 72 bp TCCCAGGAGTGGAACTGTTGGGTGAAAGGGTATGTATaGAGCTGTGATAAAATACTACTCAGTAGCTCTCCG +
Preference number: 3 (lower is better)
Translates to: SQEWNCWVKGYV*SCDKILLSSSP
Trigger: CGGAGAGCTACTGAGTAGTATTTTATCACAGCTGCATACATACCCTTTCACCCAACAGTTCCACTCCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAGGTGCTATGGTTGTTaGATGGAGAATGGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQRCYGC*MENGEG
Trigger: TCCTTCCCCATTCTCCATCAAACAACCATAGCACCT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 72 bp TTGACCATAGCTTGGTTGTGCAACTTGTCCATTTGTTaGCTAGACTCCCAGGAGTGGAACTGTTGGGTGAAA +
Preference number: 3 (lower is better)
Translates to: LTIAWLCNLSIC*LDSQEWNCWVK
Trigger: TTTCACCCAACAGTTCCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTTGCACAACCAAGCTATGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR GCA 72 bp GTTTTGGTAAGACTCCCCCATTACTTTGCTAAGACTTaGTTTCTCAACCAGTGGGATGAAACGAGTGCCAGT +
Preference number: 3 (lower is better)
Translates to: VLVRLPHYFAKT*FLNQWDETSAS
Trigger: ACTGGCACTCGTTTCATCCCACTGGTTGAGAAAGCAAGTCTTAGCAAAGTAATGGGGGAGTCTTACCAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 72 bp ATGATCATCAATGGGAGAACAGTAAAGGTGTTACTGTaGAATTCCCGACAGGCTTTCACTTGGAGGGGGAAT +
Preference number: 3 (lower is better)
Translates to: MIINGRTVKVLL*NSRQAFTWRGN
Trigger: ATTCCCCCTCCAAGTGAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGCTGATTGCACTAGATaGAACTTGGTGCTGTTTCTC +
Preference number: 3 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQADCTR*NLVLFL
Trigger: GAGAAACAGCACCAAGTTCAATCTAGTGCAATCAGC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAACTTTATGGTACTAACTaGCCATTAGCTGCCATGCTG +
Preference number: 3 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQLYGTN*PLAAML
Trigger: CAGCATGGCAGCTAATGGCAAGTTAGTACCATAAAG...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR GCA 72 bp TTTGTGGACCATAGGTCTGTCTCAACTACTGAATTCTaGCATTGTAGTGAGAAAGCACCCACAGACGATTTG +
Preference number: 3 (lower is better)
Translates to: FVDHRSVSTTEF*HCSEKAPTDDL
Trigger: CAAATCGTCTGTGGGTGCTTTCTCACTACAATGGCAGAATTCAGTAGTTGAGACAGACCTATGGTCCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTAATCATCCTAGCACTTaGAGAAGGCTGAGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: IFHLATWHATHLRELYEGNHPST*RRLRLE
Trigger: CTCCAGCCTCAGCCTTCTCAAAGTGCTAGGATGATT...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 72 bp AAACAACCCAGGGTAAGCACACAATGCACTATGCACTaGAAGGTATACGTTTCCGCTGGGTGTTTATACATT +
Preference number: 3 (lower is better)
Translates to: KQPRVSTQCTMH*KVYVSAGCLYI
Trigger: AATGTATAAACACCCAGCGGAAACGTATACCTTTCAGTGCATAGTGCATTGTGTGCTTACCCTGGGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR GCA 72 bp TTGATTGTTGTAGTCTACTTCGCTGCGATTTGCTTCTaGTCTAGTTATCCTTCATCCTCTCAAAGGCTGTCT +
Preference number: 3 (lower is better)
Translates to: LIVVVYFAAICF*SSYPSSSQRLS
Trigger: AGACAGCCTTTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTACAACAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGCAGCACATAGCTCTTaGGTAACCACAAAGTATCCA +
Preference number: 3 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCAAHSS*VTTKYP
Trigger: TGGATACTTTGTGGTTACCAAAGAGCTATGTGCTGC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAACCTGCCACATCTTTTTaGTTAGTTGCAGTAGCAATA +
Preference number: 3 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQPATSF*LVAVAI
Trigger: TATTGCTACTGCAACTAACAAAAAAGATGTGGCAGG...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CCA 72 bp CCATTTTATCGTGGAAGTCAGGTATATTCCAAGAGTTaGCTTTATGGTACTAACTTGCCATTAGCTGCCATG +
Preference number: 3 (lower is better)
Translates to: PFYRGSQVYSKS*LYGTNLPLAAM
Trigger: CATGGCAGCTAATGGCAAGTTAGTACCATAAAGCCAACTCTTGGAATATACCTGACTTCCACGATAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTTCTACAGTTGGTCTTaGGCAGCAGTATGTTTTAGG +
Preference number: 3 (lower is better)
Translates to: NKYFWAGMIFHLATWHATFYSWS*AAVCFR
Trigger: CCTAAAACATACTGCTGCCAAAGACCAACTGTAGAA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTTCTACAGTTGGTCTTaGGCAGCAGTATGTTTTAGG +
Preference number: 3 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCFYSWS*AAVCFR
Trigger: CCTAAAACATACTGCTGCCAAAGACCAACTGTAGAA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCAATCATCCTAGCACTTaGAGAAGGCTGAGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSINHPST*RRLRLE
Trigger: CTCCAGCCTCAGCCTTCTCAAAGTGCTAGGATGATT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCTTTTTCAATCACTATaGAAAGGACTCCCTGTGGCA +
Preference number: 3 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLFQSL*KGLPVA
Trigger: TGCCACAGGGAGTCCTTTCAATAGTGATTGAAAAAG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGCTGATTGCACTAGATaGAACTTGGTGCTGTTTCTC +
Preference number: 3 (lower is better)
Translates to: IFHLATWHATHLRELYEGADCTR*NLVLFL
Trigger: GAGAAACAGCACCAAGTTCAATCTAGTGCAATCAGC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTTTAAGGATTCTACAGTaGGTCTTTGGCAGCAGTATG +
Preference number: 3 (lower is better)
Translates to: IFHLATWHATHLRELYEGLRILQ*VFGSSM
Trigger: CATACTGCTGCCAAAGACCAACTGTAGAATCCTTAA...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCTTTGCTATAATGTCTaGCTTGCTAAGATAGGCCTT +
Preference number: 3 (lower is better)
Translates to: VVLSSSVLPFSITIERTPLCYNV*LAKIGL
Trigger: AAGGCCTATCTTAGCAAGCAAGACATTATAGCAAAG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGTGGGAGTCTACATATaGGGAGATGTTTGTCAAATG +
Preference number: 3 (lower is better)
Translates to: IFHLATWHATHLRELYEGVGVYI*GDVCQM
Trigger: CATTTGACAAACATCTCCCAATATGTAGACTCCCAC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTGTATGAACATAGACTaGATACCAACCTCTGTCTCT +
Preference number: 3 (lower is better)
Translates to: NKYFWAGMIFHLATWHATCMNID*IPTSVS
Trigger: AGAGACAGAGGTTGGTATCAAGTCTATGTTCATACA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR TCA 72 bp GAAGAATTAGAGAATAGTTCCCTGGCTAGAAGACGTTaGACCTTTGAGTGTTTAGGTCTTTGCTATAATGTC +
Preference number: 3 (lower is better)
Translates to: EELENSSLARRR*TFECLGLCYNV
Trigger: GACATTATAGCAAAGACCTAAACACTCAAAGGTTCAACGTCTTCTAGCCAGGGAACTATTCTCTAATTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTTGACCATAGCTTGGTaGTGCAACTTGTCCATTTGT +
Preference number: 3 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSILTIAW*CNLSIC
Trigger: ACAAATGGACAAGTTGCACAACCAAGCTATGGTCAA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR GCA 72 bp GTTCTAGGACTTCCTTTGGATATCCAAATTCGCAGATaGTCAAGTCTCTGGAATAAAATGATGTTGTATATG +
Preference number: 3 (lower is better)
Translates to: VLGLPLDIQIRR*SSLWNKMMLYM
Trigger: CATATACAACATCATTTTATTCCAGAGACTTGAGCATCTGCGAATTTGGATATCCAAAGGAAGTCCTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCCTTTGCTATAATGTCTaGCTTGCTAAGATAGGCCTT +
Preference number: 3 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSILCYNV*LAKIGL
Trigger: AAGGCCTATCTTAGCAAGCAAGACATTATAGCAAAG...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTATTAGCCGGGCGTGGTaGCAGGCGCCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPISRAW*QAPVIP
Trigger: TGGGATCACAGGCGCCTGCCACCACGCCCGGCTAAT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCGGCGGGTGGGGCGGTaGCTTAGCCAGTTATGCTTT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPRRVGR*LSQLCF
Trigger: AAAGCATAACTGGCTAAGTCACCGCCCCACCCGCCG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAAAATTAGCCGGGCGTaGTGGCAGGCGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPKISRA*WQAPVI
Trigger: GATCACAGGCGCCTGCCACCACGCCCGGCTAATTTT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAGCCTCCTGAGGAGCTaGGACTACAGACACCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPSLLRS*DYRHLP
Trigger: TGGCAGGTGTCTGTAGTCCCAGCTCCTCAGGAGGCT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAGGCGGAGGTTGCGGTaGGTTGAGATTGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPRRRLR*VEIVPL
Trigger: CAATGGCACAATCTCAACTCACCGCAACCTCCGCCT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGGCCAAGGCAGCAGTTaGAAACTGCAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPGQGSS*KLQLHL
Trigger: CAGGTGAAGCTGCAGTTTTCAACTGCTGCCTTGGCC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCATGTTGGGCCAGGATaGTCTCCATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPHVGPG*SPSPDL
Trigger: GAGGTCAGGAGATGGAGACCATCCTGGCCCAACATG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCAGTTACTCTCCAGTTaGCTAGAGTCCCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPQLLSS*LESPPS
Trigger: GCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGGGAACAGCAGCATCTaGAAAGTCCTGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPGNSSI*KVLGEK
Trigger: CTTCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTCTCAACCAGTGGGATaGAACGAGTGCCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPSQPVG*NECQCV
Trigger: AACACACTGGCACTCGTTTCATCCCACTGGTTGAGA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGGTGCTATGGTTGTTTaGTGGAGAATGGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPGAMVV*WRMGKE
Trigger: TTCCTTCCCCATTCTCCATCAAACAACCATAGCACC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCGCTTCACCTGGCCTTTaGGCCTGTTTTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFASPGL*ACFPWP
Trigger: GGGCCAGGGAAAACAGGCCCAAAGGCCAGGTGAAGC...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCTGATTGCACTAGATTaGACTTGGTGCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPLIALD*TWCCFS
Trigger: AGAGAAACAGCACCAAGTTCAATCTAGTGCAATCAG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTTGTCACCCTTGAGCTaGTCTCATTTCATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPLSPLS*SHFMCL
Trigger: AAGACACATGAAATGAGATCAGCTCAAGGGTGACAA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCGGCCAAGGCAGCAGTTaGAAACTGCAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFGQGSS*KLQLHL
Trigger: CAGGTGAAGCTGCAGTTTTCAACTGCTGCCTTGGCC...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFFKRFS*LSLLRS
Trigger: GCTCCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTGCCATGCTGGGAGCTaGACTAAAATTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPCHAGS*TKIFPL
Trigger: AAGAGGAAAAATTTTAGTCCAGCTCCCAGCATGGCA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCCAGTTACTCTCCAGTTaGCTAGAGTCCCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFQLLSS*LESPPS
Trigger: GCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTG...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGCTTCACCTGGCCTTTaGGCCTGTTTTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLASPGL*ACFPWP
Trigger: GGGCCAGGGAAAACAGGCCCAAAGGCCAGGTGAAGC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 72 bp GAGGATCTGAGTAGCAGACACCCTAAGAGCATGTCATaGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: EDLSSRHPKSMS*SSHQLLSSWLE
Trigger: CTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAATGACATGCTCTTAGGGTGTCTGCTACTCAGATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAAGACGTTGAACCTTTaGGTGTTTAGGTCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPKTLNL*VFRSLL
Trigger: TAGCAAAGACCTAAACACTCAAAGGTTCAACGTCTT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGGGATGATTAGGTGGTaGGTGAATGGCATGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQGMIRW*VNGMGL
Trigger: AAGCCCCATGCCATTCACTCACCACCTAATCATCCC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTATTGGGAGATTTGCATaGAAATCCAGAATTCGGGTA +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPIGRFA*KSRIRV
Trigger: TACCCGAATTCTGGATTTTCATGCAAATCTCCCAAT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCCGAGTGCCAGTGTGTTaGCTGAGCCTTCTTAGGACT +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFRVPVC*LSLLRT
Trigger: AGTCCTAAGAAGGCTCAGTCAACACACTGGCACTCG...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTGTCTTGTATGGCCCTaGTGGGTGGCACTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFCLVWP*WVALVS
Trigger: ACTTACCAGTGCCACCCAGCAGGGCCATACAAGACA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGGGACTACAGACACCTaGCACCACACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQGTTDT*HHTWLI
Trigger: AATTAGCCAGGTGTGGTGGCAGGTGTCTGTAGTCCC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTACTTTGCTAAGACTTaGTTTCTCAACCAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPYFAKT*FLNQWD
Trigger: ATCCCACTGGTTGAGAAAGCAAGTCTTAGCAAAGTA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGAAAATTAGCCGGGCGTaGTGGCAGGCGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLKISRA*WQAPVI
Trigger: GATCACAGGCGCCTGCCACCACGCCCGGCTAATTTT...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAAAATGTGCATTTGGTaGGGGAAATCACGTCTACAA +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPKMCIW*GKSRLQ
Trigger: TTGTAGACGTGATTTCCCCCACCAAATGCACATTTT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAACTAGACTCCCAGGAGTaGAACTGTTGGGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQLDSQE*NCWVKG
Trigger: CCCTTTCACCCAACAGTTCCACTCCTGGGAGTCTAG...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCCTTGTATGGCCCTGCTaGGTGGCACTGGTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFLVWPC*VALVSV
Trigger: TACACTTACCAGTGCCACCCAGCAGGGCCATACAAG...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATTCATGTGTCTTGTATaGCCCTGCTGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQFMCLV*PCWVAL
Trigger: CAGTGCCACCCAGCAGGGCCATACAAGACACATGAA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTTGGGCCTGTTTTCCCTaGCCCACACAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGWACFP*PTQCGW
Trigger: CCAGCCACACTGTGTGGGCCAGGGAAAACAGGCCCA...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTCTCAACCAGTGGGATaGAACGAGTGCCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFSQPVG*NECQCV
Trigger: AACACACTGGCACTCGTTTCATCCCACTGGTTGAGA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGGGCCAAGTTTCTCATaGCCTCCAACTAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQGPSFS*PPTKKP
Trigger: GGGTTTCTTAGTTGGAGGGCATGAGAAACTTGGCCC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGTGTATGCCAATACATaGATAAAACAGGTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPVYANT*IKQVVL
Trigger: CAGAACTACCTGTTTTATGCATGTATTGGCATACAC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPFKRFS*LSLLRS
Trigger: GCTCCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCATGATCTTGGCTCACTaGAGGTTCTGCCTCCCGCGT +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATMILAH*RFCLPR
Trigger: ACGCGGGAGGCAGAACCTGCAGTGAGCCAAGATCAT...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGCAGCAGTTGAAAACTaGAGCTTCACCTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQAAVEN*SFTWPL
Trigger: CAAAGGCCAGGTGAAGCTGCAGTTTTCAACTGCTGC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCATTAGCCGGGCGTGGTaGCAGGCGCCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIISRAW*QAPVIP
Trigger: TGGGATCACAGGCGCCTGCCACCACGCCCGGCTAAT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAGTAGATATCAGATCTaGCAAAAGCAGCTTAGATGT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPSRYQI*QKQLRC
Trigger: ACATCTAAGCTGCTTTTGCCAGATCTGATATCTACT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGCATGTTGGGCCAGGATaGTCTCCATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLHVGPG*SPSPDL
Trigger: GAGGTCAGGAGATGGAGACCATCCTGGCCCAACATG...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGGGGTTTCACCATGTTaGGCCAGGATGGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATGVSPC*ARMVSI
Trigger: GATGGAGACCATCCTGGCCCAACATGGTGAAACCCC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGGGGTTTCACCATGTTaGGCCAGGATGGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCGVSPC*ARMVSI
Trigger: GATGGAGACCATCCTGGCCCAACATGGTGAAACCCC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTAGCCTCCTGAGGAGCTaGGACTACAGACACCTGCCA +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGSLLRS*DYRHLP
Trigger: TGGCAGGTGTCTGTAGTCCCAGCTCCTCAGGAGGCT...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCATGGTCTCCATCTCCTaGCCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIMVSIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAGGAGATGGAGACCAT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCGGTGCTATGGTTGTTTaGTGGAGAATGGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFGAMVV*WRMGKE
Trigger: TTCCTTCCCCATTCTCCATCAAACAACCATAGCACC...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCGGGATGATTAGGTGGTaGGTGAATGGCATGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPGMIRW*VNGMGL
Trigger: AAGCCCCATGCCATTCACTCACCACCTAATCATCCC...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCGAGTGCCAGTGTGTTaGCTGAGCCTTCTTAGGACT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPRVPVC*LSLLRT
Trigger: AGTCCTAAGAAGGCTCAGTCAACACACTGGCACTCG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGTGAAAGGGTATGTATaGAGCTGTGATAAAATACTA +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPVKGYV*SCDKIL
Trigger: TAGTATTTTATCACAGCTGCATACATACCCTTTCAC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGTGTCTTGTATGGCCCTaGTGGGTGGCACTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLCLVWP*WVALVS
Trigger: ACTTACCAGTGCCACCCAGCAGGGCCATACAAGACA...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCGGGACTACAGACACCTaGCACCACACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPGTTDT*HHTWLI
Trigger: AATTAGCCAGGTGTGGTGGCAGGTGTCTGTAGTCCC...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCGGGAACAGCAGCATCTaGAAAGTCCTGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPGNSSI*KVLGEK
Trigger: CTTCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCC...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTCGTACAAACAGGCAGTaGGGTGGGGTTTGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGRTNRQ*GGVWPV
Trigger: TACAGGCCAAACCCCACCCCACTGCCTGTTTGTACG...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCTTGTATGGCCCTGCTaGGTGGCACTGGTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPLVWPC*VALVSV
Trigger: TACACTTACCAGTGCCACCCAGCAGGGCCATACAAG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTTCATGTGTCTTGTATaGCCCTGCTGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCFMCLV*PCWVAL
Trigger: CAGTGCCACCCAGCAGGGCCATACAAGACACATGAA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGTATATTCCAAGAGTTaGCTTTATGGTACTAACTTG +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPVYSKS*LYGTNL
Trigger: CAAGTTAGTACCATAAAGCCAACTCTTGGAATATAC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCTGTCATCTACCACCTaGACTAGTAATATATTGTTT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPLSSTT*TSNILF
Trigger: AAACAATATATTACTAGTCCAGGTGGTAGATGACAG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTCGAATAAGTACTTTTaGGCTGGGATGATATTTCAT +
Preference number: 4 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPSNKYF*AGMIFH
Trigger: ATGAAATATCATCCCAGCCCAAAAGTACTTATTCGA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTGGGCCTGTTTTCCCTaGCCCACACAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIWACFP*PTQCGW
Trigger: CCAGCCACACTGTGTGGGCCAGGGAAAACAGGCCCA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 72 bp TTTGACCATAGCTTGGTTGTGCAACTTGTCCATTTGTaGACTAGACTCCCAGGAGTGGAACTGTTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: FDHSLVVQLVHL*TRLPGVELLGE
Trigger: TTCACCCAACAGTTCCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTTGCACAACCAAGCTATGGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAACAATGCACTATGCACTaGAAGGTATACGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQQCTMH*KVYVSA
Trigger: AGCGGAAACGTATACCTTTCAGTGCATAGTGCATTG...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCATGCTTAAAAAGACCTaGAGGCCAGACGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATMLKKT*RPDEVA
Trigger: AGCCACCTCGTCTGGCCTGCAGGTCTTTTTAAGCAT...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCATGCTTAAAAAGACCTaGAGGCCAGACGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPMLKKT*RPDEVA
Trigger: AGCCACCTCGTCTGGCCTGCAGGTCTTTTTAAGCAT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCGCTGCGATTTGCTTCTaGTCTAGTTATCCTTCATCC +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFAAICF*SSYPSS
Trigger: GGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGC...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCCTAGAATTTAGCCAGTaGCACCAGTCAGGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFLEFSQ*HQSGRY
Trigger: ATACCTTCCTGACTGGTGCCACTGGCTAAATTCTAG...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCGTTTACAAAGTCTCCTaGCTTAAGGTCGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFVYKVS*LKVGSR
Trigger: TCTACTCCCGACCTTAAGCCAGGAGACTTTGTAAAC...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 72 bp ATATTTGACCATAGCTTGGTTGTGCAACTTGTCCATTaGTTGACTAGACTCCCAGGAGTGGAACTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: IFDHSLVVQLVH*LTRLPGVELLG
Trigger: ACCCAACAGTTCCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTTGCACAACCAAGCTATGGTCAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTCATCTTGTCACCCTTaGGCTGATCTCATTTCATGT +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFSSCHP*ADLISC
Trigger: ACATGAAATGAGATCAGCTCAAGGGTGACAAGATGA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTGCCAGTGTGTTGACTaGGCCTTCTTAGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCCQCVD*AFLGLK
Trigger: CTTAAGTCCTAAGAAGGCTCAGTCAACACACTGGCA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCTGCCAGTGTGTTGACTaGGCCTTCTTAGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPCQCVD*AFLGLK
Trigger: CTTAAGTCCTAAGAAGGCTCAGTCAACACACTGGCA...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCATGATCTTGGCTCACTaGAGGTTCTGCCTCCCGCGT +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIMILAH*RFCLPR
Trigger: ACGCGGGAGGCAGAACCTGCAGTGAGCCAAGATCAT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 72 bp TTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATaGAAAGGACTCCCTGTGGCAGCACATAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FCLVVFCLFQSL*KGLPVAAHSSL
Trigger: CAAAGAGCTATGTGCTGCCACAGGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCAATGCACTATGCACTaGAAGGTATACGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCQCTMH*KVYVSA
Trigger: AGCGGAAACGTATACCTTTCAGTGCATAGTGCATTG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCTGGCTAGAAGACGTTaGACCTTTGAGTGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLARRR*TFECLG
Trigger: ACCTAAACACTCAAAGGTTCAACGTCTTCTAGCCAG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGCCTCATTTTTCTGTTaGATGGTTCAGGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQASFFC*MVQEPF
Trigger: AAAAGGTTCCTGAACCATTCAACAGAAAAATGAGGC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTTAACTGAGAGGATCTaGGTAGCAGACACCCTAAGA +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLTERI*VADTLR
Trigger: TCTTAGGGTGTCTGCTACTCAGATCCTCTCAGTTAA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGTAAAGGTGTTACTGTaGAATTCCCGACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLVKVLL*NSRQAF
Trigger: GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTAC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTCTACAGTTGGTCTTTaGCAGCAGTATGTTTTAGGA +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFSTVGL*QQYVLG
Trigger: TCCTAAAACATACTGCTGCCAAAGACCAACTGTAGA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTTAGCATCAGGAGAGTaGGAGTCTACATATTGGGAG +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLASGE*ESTYWE
Trigger: CTCCCAATATGTAGACTCCCACTCTCCTGATGCTAA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGTTTACAAAGTCTCCTaGCTTAAGGTCGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCVYKVS*LKVGSR
Trigger: TCTACTCCCGACCTTAAGCCAGGAGACTTTGTAAAC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAGTAAAGTCATCTCTTaGTATTTGTCGGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQSKVIS*YLSGTG
Trigger: ACCAGTTCCCGACAAATACCAAGAGATGACTTTACT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCATGGGGCTTTCCTTTaGGGACCATATACTCTAATG +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCHGAFL*GPYTLM
Trigger: CATTAGAGTATATGGTCCCCAAAGGAAAGCCCCATG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCTGATTGCACTAGATTaGACTTGGTGCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPLIALD*TWCCFS
Trigger: AGAGAAACAGCACCAAGTTCAATCTAGTGCAATCAG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCTTGTCACCCTTGAGCTaGTCTCATTTCATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPLSPLS*SHFMCL
Trigger: AAGACACATGAAATGAGATCAGCTCAAGGGTGACAA...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTCATCTTGTCACCCTTaGGCTGATCTCATTTCATGT +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCSSCHP*ADLISC
Trigger: ACATGAAATGAGATCAGCTCAAGGGTGACAAGATGA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATTATTGAACAGCAAATaGTTAAAAAGACCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQLLNSK*LKRPAG
Trigger: GCCTGCAGGTCTTTTTAAGCATTTGCTGTTCAATAA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGAGTGTTTAGGTCTTTaGTATAATGTCTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQECLGL*YNVLLA
Trigger: AGCAAGCAAGACATTATAGCAAAGACCTAAACACTC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTGTAGTTCTCTGCCCTaGTCATGTCTATTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATCSSLP*SCLFPK
Trigger: TTTGGGAAATAGACATGAGCAGGGCAGAGAACTACA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCTATACACTCACCCCTaGACTCATCTCCATTTTATC +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLYTHP*THLHFI
Trigger: GATAAAATGGAGATGAGTGCAGGGGTGAGTGTATAG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCCTATACACTCACCCCTaGACTCATCTCCATTTTATC +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATLYTHP*THLHFI
Trigger: GATAAAATGGAGATGAGTGCAGGGGTGAGTGTATAG...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGTACTTCGCTGCGATTTaGTTCTGCTCTAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLYFAAI*FCSSYP
Trigger: AGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTA...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTACTTCGCTGCGATTTaGTTCTGCTCTAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCYFAAI*FCSSYP
Trigger: AGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCGCAGCAGTTGAAAACTaGAGCTTCACCTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIAAVEN*SFTWPL
Trigger: CAAAGGCCAGGTGAAGCTGCAGTTTTCAACTGCTGC...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGTAAAGGTGTTACTGTaGAATTCCCGACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGVKVLL*NSRQAF
Trigger: GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTAC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCTGCCATGCTGGGAGCTaGACTAAAATTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPCHAGS*TKIFPL
Trigger: AAGAGGAAAAATTTTAGTCCAGCTCCCAGCATGGCA...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTTTCATTTAGCTACTTaGCATGCCACCCATCTTAGG +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATFHLAT*HATHLR
Trigger: CCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGCATCTGCAAAGTCCTaGGAGAGAAGAAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLASAKS*ERRKES
Trigger: AGATTCTTTTCTTCTCTCCCAGGACTTTGCAGATGC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTCATGGGGCTTTCCTTTaGGGACCATATACTCTAATG +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGHGAFL*GPYTLM
Trigger: CATTAGAGTATATGGTCCCCAAAGGAAAGCCCCATG...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCAACTTGTCCATTTGTTaGCTAGACTCCCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSINLSIC*LDSQEW
Trigger: CCACTCCTGGGAGTCTAGTCAACAAATGGACAAGTT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTTTTTTCAATCACTATTaGAAGGACTCCCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGFFNHY*KDSLWQ
Trigger: CTGCCACAGGGAGTCCTTTCAATAGTGATTGAAAAA...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGAGAAGAAAAGAATCTaGACATTAAGTGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCEKKRI*TLSGFL
Trigger: CAGGAAGCCACTTAATGTTCAGATTCTTTTCTTCTC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGAGAAGAAAAGAATCTaGACATTAAGTGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATEKKRI*TLSGFL
Trigger: CAGGAAGCCACTTAATGTTCAGATTCTTTTCTTCTC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGATTGGGAGATTTGCATaGAAATCCAGAATTCGGGTA +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLIGRFA*KSRIRV
Trigger: TACCCGAATTCTGGATTTTCATGCAAATCTCCCAAT...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGTGAAAGGGTATGTATaGAGCTGTGATAAAATACTA +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQVKGYV*SCDKIL
Trigger: TAGTATTTTATCACAGCTGCATACATACCCTTTCAC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTGTCTAGTAGTGTTCTaGCTTTTTCAATCACTATTG +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFCLVVF*LFQSLL
Trigger: CAATAGTGATTGAAAAAGGCAGAACACTACTAGACA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGATAAAAGTCACAGGTaGTATGGTTGTTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCDKSHR*YGCLME
Trigger: CTCCATCAAACAACCATAGCACCTGTGACTTTTATC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTACTTTGCTAAGACTTaGTTTCTCAACCAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATYFAKT*FLNQWD
Trigger: ATCCCACTGGTTGAGAAAGCAAGTCTTAGCAAAGTA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAAAATGTGCATTTGGTaGGGGAAATCACGTCTACAA +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPKMCIW*GKSRLQ
Trigger: TTGTAGACGTGATTTCCCCCACCAAATGCACATTTT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGCATAAAATGTGCATTTaGTGGGGGAAATCACGTCTA +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLHKMCI*WGKSRL
Trigger: TAGACGTGATTTCCCCCACCAAATGCACATTTTATG...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTTTTCATTTAGCTACTTaGCATGCCACCCATCTTAGG +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGFHLAT*HATHLR
Trigger: CCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAA...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTTGGAATATTTTGTCTaGTTGTTTGAATCCACGGAA +
Preference number: 4 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFLEYFV*LFESTE
Trigger: TTCCGTGGATTCAAACAACCAGACAAAATATTCCAA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGCATCTGCAAAGTCCTaGGAGAGAAGAAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGASAKS*ERRKES
Trigger: AGATTCTTTTCTTCTCTCCCAGGACTTTGCAGATGC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAAAAGAGAAGTAACTTaGACAGACTTTTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQKREVT*TDFWIQ
Trigger: CTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCCCACACAGTGTGGCTaGTTAAAACATTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCPTQCG*LKHSEF
Trigger: AAATTCAGAATGTTTTAACCAGCCACACTGTGTGGG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTTCTTATACTCCAATGTaGAGACAACATTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGSYTPM*RQHWKG
Trigger: CCCTTTCCAATGTTGTCTTCACATTGGAGTATAAGA...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCCTGGCTAGAAGACGTTaGACCTTTGAGTGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSILARRR*TFECLG
Trigger: ACCTAAACACTCAAAGGTTCAACGTCTTCTAGCCAG...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR TCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCAAATCCTTTGCTGCTaGGCATTTTATTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPQILCC*AFYFNG
Trigger: GCCATTAAAATAAAATGCTCAGCAGCAAAGGATTTG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGTTCAGAAACCTGGTTTaGAAATCTGAGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLFRNLV*KSEFMC
Trigger: ACACATGAACTCAGATTTGCAAACCAGGTTTCTGAA...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTTCAGAAACCTGGTTTaGAAATCTGAGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATFRNLV*KSEFMC
Trigger: ACACATGAACTCAGATTTGCAAACCAGGTTTCTGAA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTTATTGAACAGCAAATaGTTAAAAAGACCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLLNSK*LKRPAG
Trigger: GCCTGCAGGTCTTTTTAAGCATTTGCTGTTCAATAA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTATCCAAATTCGCAGATaGTCAAGTCTCTGGAATAAA +
Preference number: 4 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCIQIRR*SSLWNK
Trigger: TTTATTCCAGAGACTTGAGCATCTGCGAATTTGGAT...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCGCTGCGATTTGCTTCTaGTCTAGTTATCCTTCATCC +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIAAICF*SSYPSS
Trigger: GGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGC...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTTCTACAGTTGGTCTTTaGCAGCAGTATGTTTTAGGA +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGSTVGL*QQYVLG
Trigger: TCCTAAAACATACTGCTGCCAAAGACCAACTGTAGA...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAGTAGATATCAGATCTaGCAAAAGCAGCTTAGATGT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPSRYQI*QKQLRC
Trigger: ACATCTAAGCTGCTTTTGCCAGATCTGATATCTACT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTAGTAAAGTCATCTCTTaGTATTTGTCGGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGSKVIS*YLSGTG
Trigger: ACCAGTTCCCGACAAATACCAAGAGATGACTTTACT...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTCCCACACAGTGTGGCTaGTTAAAACATTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGPTQCG*LKHSEF
Trigger: AAATTCAGAATGTTTTAACCAGCCACACTGTGTGGG...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 72 bp AATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTaGGACAGACTTTTGGATTCAGGCCAGATGAACATC +
Preference number: 4 (lower is better)
Translates to: NSCNSVMEKRSN*DRLLDSGQMNI
Trigger: GATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTATCCAAATTCGCAGATaGTCAAGTCTCTGGAATAAA +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGIQIRR*SSLWNK
Trigger: TTTATTCCAGAGACTTGAGCATCTGCGAATTTGGAT...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAAAGTTTCAGAAACCTaGTTTGCAAATCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPKVSET*FANLSS
Trigger: TGAACTCAGATTTGCAAACCAGGTTTCTGAAACTTT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGTATATGATCATCAATaGGAGAACAGTAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLVYDHQ*ENSKGV
Trigger: AACACCTTTACTGTTCTCCCATTGATGATCATATAC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGTATATGATCATCAATaGGAGAACAGTAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATVYDHQ*ENSKGV
Trigger: AACACCTTTACTGTTCTCCCATTGATGATCATATAC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCATCTCCATTTTATCGTaGAAGTCAGGTATATTCCAA +
Preference number: 4 (lower is better)
Translates to: NKYFWAGMIFHLATWHATISILS*KSGIFQ
Trigger: TTGGAATATACCTGACTTCCACGATAAAATGGAGAT...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCTGTCATCTACCACCTaGACTAGTAATATATTGTTT +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPLSSTT*TSNILF
Trigger: AAACAATATATTACTAGTCCAGGTGGTAGATGACAG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCTTGGAATATTTTGTCTaGTTGTTTGAATCCACGGAA +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPLEYFV*LFESTE
Trigger: TTCCGTGGATTCAAACAACCAGACAAAATATTCCAA...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAAAAGAGAAGTAACTTaGACAGACTTTTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: VVLSSSVLPFSITIERTPKREVT*TDFWIQ
Trigger: CTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
3UTR CAA 72 bp TTCATAAATCCTACAACACACATATTTGACCATAGCTaGGTTGTGCAACTTGTCCATTTGTTGACTAGACTC +
Preference number: 4 (lower is better)
Translates to: FINPTTHIFDHS*VVQLVHLLTRL
Trigger: GAGTCTAGTCAACAAATGGACAAGTTGCACAACCAAGCTATGGTCAAATATGTGTGTTGTAGGATTTATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCGCACACAATGCACTATaGACTGAAAGGTATACGTTT +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIAHNAL*TERYTF
Trigger: AAACGTATACCTTTCAGTGCATAGTGCATTGTGTGC...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCGATAAAAGTCACAGGTaGTATGGTTGTTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIDKSHR*YGCLME
Trigger: CTCCATCAAACAACCATAGCACCTGTGACTTTTATC...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGTATATTCCAAGAGTTaGCTTTATGGTACTAACTTG +
Preference number: 4 (lower is better)
Translates to: IFHLATWHATHLRELYEGVYSKS*LYGTNL
Trigger: CAAGTTAGTACCATAAAGCCAACTCTTGGAATATAC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCGTGTATGCCAATACATaGATAAAACAGGTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIVYANT*IKQVVL
Trigger: CAGAACTACCTGTTTTATGCATGTATTGGCATACAC...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCGGTATACGTTTCCGCTaGGTGTTTATACATTTCAAA +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIGIRFR*VFIHFK
Trigger: TTTGAAATGTATAAACACCCAGCGGAAACGTATACC...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTGGGAGTCTACATATTaGGAGATGTTTGTCAAATGT +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIWESTY*EMFVKC
Trigger: ACATTTGACAAACATCTCCCAATATGTAGACTCCCA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR GCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTGTCTAGTAGTGTTCTaGCTTTTTCAATCACTATTG +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSICLVVF*LFQSLL
Trigger: CAATAGTGATTGAAAAAGGCAGAACACTACTAGACA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCATCTCCATTTTATCGTaGAAGTCAGGTATATTCCAA +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIISILS*KSGIFQ
Trigger: TTGGAATATACCTGACTTCCACGATAAAATGGAGAT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CCA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTCGAATAAGTACTTTTaGGCTGGGATGATATTTCAT +
Preference number: 4 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSISNKYF*AGMIFH
Trigger: ATGAAATATCATCCCAGCCCAAAAGTACTTATTCGA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS TCA 90 bp CTCGAGGTTTATCCGGCTTTCAACTCAATTCGCACGTTAAGATGGTaGCTCCCGCTAGGCGAGACTTACGCGGCCCGGGACCTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: LEVYPAFNSIRTLRW*LPLGETYAARDLPG
Trigger: CCCGGGAAGGTCCCGGGCCGCGTAAGTCTCGCCTAGCGGGAGTCACCATCTTAACGTGCGAATTGAGTTGAAAGCCGGATAAACCTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546925.1
ENST00000547014.5
ENST00000549992.5
CDS-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAACTTGGACAGACTTTaGGATTCAGGCCAGATGAAC +
Preference number: 5 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPNLDRL*DSGQMN
Trigger: GTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGAGGCAGGAGAATCGCTaGAACCTGGCAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLRQENR*NLAGGG
Trigger: ACCTCCGCCTGCCAGGTTCAAGCGATTCTCCTGCCT...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTCTTTTTCAATCACTATaGAAAGGACTCCCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPLFQSL*KGLPVA
Trigger: TGCCACAGGGAGTCCTTTCAATAGTGATTGAAAAAG...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTGCTGTGGCATGATCTaGGCTCACTGCAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFCCGMI*AHCRFC
Trigger: GCAGAACCTGCAGTGAGCCAAGATCATGCCACAGCA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTAAAAGTGTTTCATGTTaGCCCACTAGTTGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPKSVSC*PTSCWG
Trigger: TCCCCAACAACTAGTGGGCAAACATGAAACACTTTT...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAGCTTCACCTGGCCTTaGGGCCTGTTTTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: VVLSSSVLPFSITIERTPSFTWP*GLFSLA
Trigger: GGCCAGGGAAAACAGGCCCAAAGGCCAGGTGAAGCT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTAGGCAGGAGAATCGCTaGAACCTGGCAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: IFHLATWHATHLRELYEGRQENR*NLAGGG
Trigger: ACCTCCGCCTGCCAGGTTCAAGCGATTCTCCTGCCT...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTTTCACTCTAGTGCCTaGTCTTGGTATATGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPFHSSA*SWYMSL
Trigger: CAAAGACATATACCAAGACAAGGCACTAGAGTGAAA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTTGTATGAACATAGACTaGATACCAACCTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPCMNID*IPTSVS
Trigger: AGAGACAGAGGTTGGTATCAAGTCTATGTTCATACA...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCCTCATTTCATGTGTCTaGTATGGCCCTGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFLISCV*YGPAGW
Trigger: CCACCCAGCAGGGCCATACAAGACACATGAAATGAG...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAAGGCCAAGGCAGCAGTaGAAAACTGCAGCTTCACCT +
Preference number: 5 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQRPRQQ*KTAASP
Trigger: AGGTGAAGCTGCAGTTTTCAACTGCTGCCTTGGCCT...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCAATCATCCTAGCACTTaGAGAAGGCTGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFNHPST*RRLRLE
Trigger: CTCCAGCCTCAGCCTTCTCAAAGTGCTAGGATGATT...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp TTGTCTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCCCTCCGAGCACACCTGAAAAGAGAAGTAACTaGGACAGACTTTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: LSSHQLLSSWLESPPSTPEKRSN*DRLLDS
Trigger: TGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTC...AGGTGTGCTCGGAGGGGACTCTAGCCAACTGGAGAGTAACTGGTGAGAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCTCATTTCATGTGTCTaGTATGGCCCTGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: VVLSSSVLPFSITIERTPLISCV*YGPAGW
Trigger: CCACCCAGCAGGGCCATACAAGACACATGAAATGAG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGTCATCTCTTGGTATTaGTCGGGAACTGGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQVISWY*SGTGSR
Trigger: CCTAGAACCAGTTCCCGACAAATACCAAGAGATGAC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCGCATGGGGCTTTCCTTaGGGGACCATATACTCTAAT +
Preference number: 5 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFAWGFP*GTIYSN
Trigger: ATTAGAGTATATGGTCCCCAAAGGAAAGCCCCATGC...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCAGCTTCACCTGGCCTTaGGGCCTGTTTTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSISFTWP*GLFSLA
Trigger: GGCCAGGGAAAACAGGCCCAAAGGCCAGGTGAAGCT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCAGGCCAAGGCAGCAGTaGAAAACTGCAGCTTCACCT +
Preference number: 5 (lower is better)
Translates to: NKYFWAGMIFHLATWHATRPRQQ*KTAASP
Trigger: AGGTGAAGCTGCAGTTTTCAACTGCTGCCTTGGCCT...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTCCGACAGGCTTTCACTaGGAGGGGGAATATTTGAAC +
Preference number: 5 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCPTGFH*EGEYLN
Trigger: GTTCAAATATTCCCCCTCCAAGTGAAAGCCTGTCGG...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCAATCATCCTAGCACTTaGAGAAGGCTGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VVLSSSVLPFSITIERTPNHPST*RRLRLE
Trigger: CTCCAGCCTCAGCCTTCTCAAAGTGCTAGGATGATT...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCCAGGAGTGGAACTGTaGGGTGAAAGGGTATGTATG +
Preference number: 5 (lower is better)
Translates to: VVLSSSVLPFSITIERTPPGVEL*GERVCM
Trigger: CATACATACCCTTTCACCCAACAGTTCCACTCCTGG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCGACTCCCCCATTACTTaGCTAAGACTTGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFDSPIT*LRLAFS
Trigger: TGAGAAAGCAAGTCTTAGCAAAGTAATGGGGGAGTC...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAATTCTACAGTTGGTCTTaGGCAGCAGTATGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQFYSWS*AAVCFR
Trigger: CCTAAAACATACTGCTGCCAAAGACCAACTGTAGAA...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGTGGGAGTCTACATATaGGGAGATGTTTGTCAAATG +
Preference number: 5 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQVGVYI*GDVCQM
Trigger: CATTTGACAAACATCTCCCAATATGTAGACTCCCAC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTGCTGTGGCATGATCTaGGCTCACTGCAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSICCGMI*AHCRFC
Trigger: GCAGAACCTGCAGTGAGCCAAGATCATGCCACAGCA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGTCACAGGTGCTATGGTaGTTTGATGGAGAATGGGGA +
Preference number: 5 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLSQVLW*FDGEWG
Trigger: TCCCCATTCTCCATCAAACAACCATAGCACCTGTGA...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCATTTTGTCTGGTTGTTaGAATCCACGGAAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFILSGC*NPRKWN
Trigger: GTTCCACTTCCGTGGATTCAAACAACCAGACAAAAT...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGCAGCACATAGCTCTTaGGTAACCACAAAGTATCCA +
Preference number: 5 (lower is better)
Translates to: NKYFWAGMIFHLATWHATAAHSS*VTTKYP
Trigger: TGGATACTTTGTGGTTACCAAAGAGCTATGTGCTGC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGCTGATTGCACTAGATaGAACTTGGTGCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: NKYFWAGMIFHLATWHATADCTR*NLVLFL
Trigger: GAGAAACAGCACCAAGTTCAATCTAGTGCAATCAGC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGCTGATTGCACTAGATaGAACTTGGTGCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLADCTR*NLVLFL
Trigger: GAGAAACAGCACCAAGTTCAATCTAGTGCAATCAGC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAACTAAGTGGAACTAAATaGGATCGAGGAAATGATAGG +
Preference number: 5 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQLSGTK*DRGNDR
Trigger: CCTATCATTTCCTCGATCCAATTTAGTTCCACTTAG...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTTCACAGGTGCTATGGTaGTTTGATGGAGAATGGGGA +
Preference number: 5 (lower is better)
Translates to: IFHLATWHATHLRELYEGSQVLW*FDGEWG
Trigger: TCCCCATTCTCCATCAAACAACCATAGCACCTGTGA...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGTCATCTCTTGGTATTaGTCGGGAACTGGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: IFHLATWHATHLRELYEGVISWY*SGTGSR
Trigger: CCTAGAACCAGTTCCCGACAAATACCAAGAGATGAC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCCCTAAGAGCATGTCATaGTCTTCTCACCAGTTACTC +
Preference number: 5 (lower is better)
Translates to: VVLSSSVLPFSITIERTPPKSMS*SSHQLL
Trigger: GAGTAACTGGTGAGAAGACAATGACATGCTCTTAGG...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCGACTCCCCCATTACTTaGCTAAGACTTGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: VVLSSSVLPFSITIERTPDSPIT*LRLAFS
Trigger: TGAGAAAGCAAGTCTTAGCAAAGTAATGGGGGAGTC...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATCATCAATGGGAGAACAGTAAAGGTGTTACTGTGGAATTCCCGACAGGCTTTCTTACTGCCCGTAATATaGCTCATGGTTATAGCTAGT +
Preference number: 5 (lower is better)
Translates to: IINGRTVKVLLWNSRQAFLLPVI*LMVIAS
Trigger: ACTAGCTATAACCATGAGCAATATTACGGGCAGTAA...GAAAGCCTGTCGGGAATTCCACAGTAACACCTTTACTGTTCTCCCATTGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTTAAGGATTCTACAGTaGGTCTTTGGCAGCAGTATG +
Preference number: 5 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLRILQ*VFGSSM
Trigger: CATACTGCTGCCAAAGACCAACTGTAGAATCCTTAA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCTTAAGGATTCTACAGTaGGTCTTTGGCAGCAGTATG +
Preference number: 5 (lower is better)
Translates to: NKYFWAGMIFHLATWHATLRILQ*VFGSSM
Trigger: CATACTGCTGCCAAAGACCAACTGTAGAATCCTTAA...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTGTGGGAGTCTACATATaGGGAGATGTTTGTCAAATG +
Preference number: 5 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCVGVYI*GDVCQM
Trigger: CATTTGACAAACATCTCCCAATATGTAGACTCCCAC...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTTGACCATAGCTTGGTaGTGCAACTTGTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCLTIAW*CNLSIC
Trigger: ACAAATGGACAAGTTGCACAACCAAGCTATGGTCAA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGCAGCACATAGCTCTTaGGTAACCACAAAGTATCCA +
Preference number: 5 (lower is better)
Translates to: IFHLATWHATHLRELYEGAAHSS*VTTKYP
Trigger: TGGATACTTTGTGGTTACCAAAGAGCTATGTGCTGC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTTGCACTAGATTGAACTaGGTGCTGTTTCTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCCTRLN*VLFLLG
Trigger: ACCTAAGAGAAACAGCACCAAGTTCAATCTAGTGCA...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GAAGGGGGACAGACAAATAGTTGTAACTCTGTCATGGAAAAGAGAAGTAACTTGGGCCTCATTTTTCTGTaGAATGGTTCAGGAACCTTT +
Preference number: 5 (lower is better)
Translates to: EGGQTNSCNSVMEKRSNLGLIFL*NGSGTF
Trigger: AAAGGTTCCTGAACCATTCAACAGAAAAATGAGGCC...CAAGTTACTTCTCTTTTCCATGACAGAGTTACAACTATTTGTCTGTCCCCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp CAGGACACATCAGGACTGAGCAACCAAGTAAGTCCAAGTTATTACAATTCATGTATTTTGTCTGGTTGTTaGAATCCACGGAAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: QDTSGLSNQVSPSYYNSCILSGC*NPRKWN
Trigger: GTTCCACTTCCGTGGATTCAAACAACCAGACAAAAT...ACATGAATTGTAATAACTTGGACTTACTTGGTTGCTCAGTCCTGATGTGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTCTACTTCGCTGCGATTTGCTTCTGCTCTAGTTATCCTTCATCCTCTCAAGAAAAGAGAAGTAACTaGGACAGACTTTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: VVYFAAICFCSSYPSSSQEKRSN*DRLLDS
Trigger: TGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTC...TTGAGAGGATGAAGGATAACTAGAGCAGAAGCAAATCGCAGCGAAGTAGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCAAAAGTGTTTCATGTTaGCCCACTAGTTGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: NKYFWAGMIFHLATWHATKSVSC*PTSCWG
Trigger: TCCCCAACAACTAGTGGGCAAACATGAAACACTTTT...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp GTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCACTATTGAAAGGACTCCCTTTTCCTTTGCAGTTTaGGTAAGACTCCCCCATTAC +
Preference number: 5 (lower is better)
Translates to: VVLSSSVLPFSITIERTPFSFAV*VRLPHY
Trigger: GTAATGGGGGAGTCTTACCAAAACTGCAAAGGAAAA...GGGAGTCCTTTCAATAGTGATTGAAAAAGGCAGAACACTACTAGACAGAACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp ATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATTATATGAGGGTGGCCTCATTTTTCTGTaGAATGGTTCAGGAACCTTT +
Preference number: 5 (lower is better)
Translates to: IFHLATWHATHLRELYEGGLIFL*NGSGTF
Trigger: AAAGGTTCCTGAACCATTCAACAGAAAAATGAGGCC...ACCCTCATATAATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATGAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCAGGTGCTATGGTTGTTaGATGGAGAATGGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIRCYGC*MENGEG
Trigger: TCCTTCCCCATTCTCCATCAAACAACCATAGCACCT...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCGAATATTTTGTCTGGTaGTTTGAATCCACGGAAGTG +
Preference number: 5 (lower is better)
Translates to: NKYFWAGMIFHLATWHATEYFVW*FESTEV
Trigger: CACTTCCGTGGATTCAAACAACCAGACAAAATATTC...GGTGGCATGCCAAGTAGCTAAATGAAATATCATCCCAGCCCAAAAGTACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCGCATGGGGCTTTCCTTaGGGGACCATATACTCTAAT +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIAWGFP*GTIYSN
Trigger: ATTAGAGTATATGGTCCCCAAAGGAAAGCCCCATGC...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCCCTAAGAGCATGTCATaGTCTTCTCACCAGTTACTC +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIPKSMS*SSHQLL
Trigger: GAGTAACTGGTGAGAAGACAATGACATGCTCTTAGG...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCCTTTTTCAATCACTATaGAAAGGACTCCCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSILFQSL*KGLPVA
Trigger: TGCCACAGGGAGTCCTTTCAATAGTGATTGAAAAAG...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTTTTCCTTTGCAGTTTaGGTAAGACTCCCCCATTAC +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIFSFAV*VRLPHY
Trigger: GTAATGGGGGAGTCTTACCAAAACTGCAAAGGAAAA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTTTCACTCTAGTGCCTaGTCTTGGTATATGTCTTTG +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSIFHSSA*SWYMSL
Trigger: CAAAGACATATACCAAGACAAGGCACTAGAGTGAAA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTGTATGAACATAGACTaGATACCAACCTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSICMNID*IPTSVS
Trigger: AGAGACAGAGGTTGGTATCAAGTCTATGTTCATACA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCCTAAGTGGAACTAAATaGGATCGAGGAAATGATAGG +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSILSGTK*DRGNDR
Trigger: CCTATCATTTCCTCGATCCAATTTAGTTCCACTTAG...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS-3UTR CAA 90 bp AATACATGCATAAAACAGGTAGTTCTGTCTAGTAGTGTTCTGCCTTTTTCAATCTTACTGCCCGTAATATaGCTCATGGTTATAGCTAGT +
Preference number: 5 (lower is better)
Translates to: NTCIKQVVLSSSVLPFSILLPVI*LMVIAS
Trigger: ACTAGCTATAACCATGAGCAATATTACGGGCAGTAA...GATTGAAAAAGGCAGAACACTACTAGACAGAACTACCTGTTTTATGCATGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337179.9
ENST00000415493.7
CDS GCA 72 bp CCCGGGACCTTCCCGGGGACCAGGCGCCTTCTCGAGTaGCCAGATGGAGAAACTGGGGCTGGGCGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: PGTFPGTRRLLE*PDGETGAGRAP
Trigger: GGGGGCTCGCCCAGCCCCAGTTTCTCCATCTGGGCACTCGAGAAGGCGCCTGGTCCCCGGGAAGGTCCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547014.5
ENST00000548662.5
ENST00000549992.5
ENST00000550056.5
CDS CCA 72 bp AGCAGCACTGAGAACTTCAGTACAGGAACAGCCAGATaGGAGCGCCACGTAGGCGGCCCGGGACCTTCCCGG +
Preference number: 6 (lower is better)
Translates to: SSTENFSTGTAR*ERHVGGPGPSR
Trigger: CCGGGAAGGTCCCGGGCCGCCTACGTGGCGCTCCCATCTGGCTGTTCCTGTACTGAAGTTCTCAGTGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550056.5
CDS TCA 72 bp TATCCGGCTTTCAACTCAATTCGCACGTTAAGATGGTaGCTCCCGCTAGGCGAGACTTACGCGGCCCGGGAC +
Preference number: 6 (lower is better)
Translates to: YPAFNSIRTLRW*LPLGETYAARD
Trigger: GTCCCGGGCCGCGTAAGTCTCGCCTAGCGGGAGTCACCATCTTAACGTGCGAATTGAGTTGAAAGCCGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546925.1
ENST00000547014.5
ENST00000549992.5