RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000272325

Ensembl transcript IDs: ENST00000607016.2

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCGGAAATCCTGCTGTGACGCCACCCTCGAGACCTTCTGCAGCCTaGGAGGGGGTGATACTCCCACACCCTTTGATCCTTCCAGATGGC +
Preference number: 1 (lower is better)
Translates to: GGNPAVTPPSRPSAA*EGVILPHPLILPDG
Trigger: GCCATCTGGAAGGATCAAAGGGTGTGGGAGTATCACCCCCTCTCAGGCTGCAGAAGGTCTCGAGGGTGGCGTCACAGCAGGATTTCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp TGCAGAAGGCGGAAATCCTGCTGTGACGCCACCCTCGAGACCTTCTaGAGCCTGAGAGGGGGTGATACTCCCACACCCTTTGATCCTTCC +
Preference number: 1 (lower is better)
Translates to: CRRRKSCCDATLETF*SLRGGDTPTPFDPS
Trigger: GGAAGGATCAAAGGGTGTGGGAGTATCACCCCCTCTCAGGCTGCAGAAGGTCTCGAGGGTGGCGTCACAGCAGGATTTCCGCCTTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp GCAAGGCCTCAAGTGCCTCATGTTCCATGGGGCTGTGCAGTGCAATaGAGAAGGCGGAAATCCTGCTGTGACGCCACCCTCGAGACCTTC +
Preference number: 1 (lower is better)
Translates to: ARPQVPHVPWGCAVQ*RRRKSCCDATLETF
Trigger: GAAGGTCTCGAGGGTGGCGTCACAGCAGGATTTCCGCCTTCTGCATTGCACTGCACAGCCCCATGGAACATGAGGCACTTGAGGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 90 bp CCCCAGAGGCTCCAAGAAGCAAGGCCTCAAGTGCCTCATGTTCCATaGGGCTGTGCAGTGCAATGCAGAAGGCGGAAATCCTGCTGTGAC +
Preference number: 1 (lower is better)
Translates to: PQRLQEARPQVPHVP*GCAVQCRRRKSCCD
Trigger: GTCACAGCAGGATTTCCGCCTTCTGCATTGCACTGCACAGCCCCATGGAACATGAGGCACTTGAGGCCTTGCTTCTTGGAGCCTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp CTCCGCTGCAAAACTCACGAAACAGCACAGAGGATGACTCTAGGGTaGTCTCCCACTTGCTCCAAGTTAGGCAGGTGCCCTGATGGAGGC +
Preference number: 1 (lower is better)
Translates to: LRCKTHETAQRMTLG*SPTCSKLGRCPDGG
Trigger: GCCTCCATCAGGGCACCTGCCTAACTTGGAGCAAGTGGGAGAGCACCCTAGAGTCATCCTCTGTGCTGTTTCGTGAGTTTTGCAGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp GTCAAATGTGAAACCGCCCTTTTAGAGGCAGGGTTTGTGAAAGGCTaGTGGCCTCCAAAGGAGAGTATGCCTAAACTCTCTGGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: VKCETALLEAGFVKG*WPPKESMPKLSGLP
Trigger: TGGGAGCCCAGAGAGTTTAGGCATACTCTCCTTTGGAGGCCAGCAGCCTTTCACAAACCCTGCCTCTAAAAGGGCGGTTTCACATTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp TTAGAAAATTCTGAGCAAACATGCTCCCAGTCACGAGGGATGGGGTaGGCGGGCAGGTTTCTGTCTGTGAGCTATAGCTCCCTTCTGAAC +
Preference number: 1 (lower is better)
Translates to: LENSEQTCSQSRGMG*AGRFLSVSYSSLLN
Trigger: GTTCAGAAGGGAGCTATAGCTCACAGACAGAAACCTGCCCGCTCACCCCATCCCTCGTGACTGGGAGCATGTTTGCTCAGAATTTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp CCTTTCTTTGCTGCCCACCATGCCTTATTTGAAAGAGGAGGCCTGTaGGAAGTGGAAAGAGCCAGGGTGAGAGGGAAGATTTGCACTTCA +
Preference number: 1 (lower is better)
Translates to: PFFAAHHALFERGGL*EVERARVRGKICTS
Trigger: TGAAGTGCAAATCTTCCCTCTCACCCTGGCTCTTTCCACTTCTCACAGGCCTCCTCTTTCAAATAAGGCATGGTGGGCAGCAAAGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp CAAAGGAGAGTATGCCTAAACTCTCTGGGCTCCCAGGACCTGTGGTaGCCTCAAGCTAACCTGATGCACAGACAACAGTATCTTTTAGGG +
Preference number: 1 (lower is better)
Translates to: QRRVCLNSLGSQDLW*PQANLMHRQQYLLG
Trigger: CCCTAAAAGATACTGTTGTCTGTGCATCAGGTTAGCTTGAGGTCACCACAGGTCCTGGGAGCCCAGAGAGTTTAGGCATACTCTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp GCAACACCATGCCACTGGGCCCTGGACTCTGATGTTTCTGATCCCTaGGCAACACATCTATGTCCATTCACAGATGGAAATGAAAGAGTG +
Preference number: 1 (lower is better)
Translates to: ATPCHWALDSDVSDP*ATHLCPFTDGNERV
Trigger: CACTCTTTCATTTCCATCTGTGAATGGACATAGATGTGTTGCTCAGGGATCAGAAACATCAGAGTCCAGGGCCCAGTGGCATGGTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp GAATCTAGGACATGCAGACTCACTGTGAGCGAGAGGCTAGGGATCTaGCCTAAACATAGGAACCTGTTTCTATCAAGCCTGAATGAGGTC +
Preference number: 1 (lower is better)
Translates to: ESRTCRLTVSERLGI*PKHRNLFLSSLNEV
Trigger: GACCTCATTCAGGCTTGATAGAAACAGGTTCCTATGTTTAGGGCAGATCCCTAGCCTCTCGCTCACAGTGAGTCTGCATGTCCTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp CTCCCTTCTGAACTCCCTCATGTTCTTGGGAGGACACAAGCCTCTTaGTCATTAAGCAAAGGCCCTCCAAGTCTCCTTTTTACTTCAGCA +
Preference number: 1 (lower is better)
Translates to: LPSELPHVLGRTQAS*SLSKGPPSLLFTSA
Trigger: TGCTGAAGTAAAAAGGAGACTTGGAGGGCCTTTGCTTAATGAGCAAGAGGCTTGTGTCCTCCCAAGAACATGAGGGAGTTCAGAAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 90 bp GATTACGTGGCCTCCCATATGGACCTTTCATATCCTGGTGGGAGATaGGAGACCAATTTAATAGCTCTGAGCATGCTCCATGGTGCAATC +
Preference number: 1 (lower is better)
Translates to: DYVASHMDLSYPGGR*ETNLIALSMLHGAI
Trigger: GATTGCACCATGGAGCATGCTCAGAGCTATTAAATTGGTCTCCCATCTCCCACCAGGATATGAAAGGTCCATATGGGAGGCCACGTAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp AACATTATCAATACACCCTTTCTTTGCTGCCCACCATGCCTTATTTaGAAGAGGAGGCCTGTGAGAAGTGGAAAGAGCCAGGGTGAGAGG +
Preference number: 1 (lower is better)
Translates to: NIINTPFLCCPPCLI*KRRPVRSGKSQGER
Trigger: CCTCTCACCCTGGCTCTTTCCACTTCTCACAGGCCTCCTCTTTCAAATAAGGCATGGTGGGCAGCAAAGAAAGGGTGTATTGATAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp TGGGAGATGGGAGACCAATTTAATAGCTCTGAGCATGCTCCATGGTaGAATCACAAGTGCCATGCCAATACAAAGACAAGCAAGCAGGTG +
Preference number: 1 (lower is better)
Translates to: WEMGDQFNSSEHAPW*NHKCHANTKTSKQV
Trigger: CACCTGCTTGCTTGTCTTTGTATTGGCATGGCACTTGTGATTGCACCATGGAGCATGCTCAGAGCTATTAAATTGGTCTCCCATCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 90 bp TGGTGGGAGATGGGAGACCAATTTAATAGCTCTGAGCATGCTCCATaGTGCAATCACAAGTGCCATGCCAATACAAAGACAAGCAAGCAG +
Preference number: 1 (lower is better)
Translates to: WWEMGDQFNSSEHAP*CNHKCHANTKTSKQ
Trigger: CTGCTTGCTTGTCTTTGTATTGGCATGGCACTTGTGATTGCACCATGGAGCATGCTCAGAGCTATTAAATTGGTCTCCCATCTCCCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp GGTGCAATCACAAGTGCCATGCCAATACAAAGACAAGCAAGCAGGTaGATTTCCCTAGTGTACTTTTCAGGAACACGGTTACTCAGTTCA +
Preference number: 1 (lower is better)
Translates to: GAITSAMPIQRQASR*ISLVYFSGTRLLSS
Trigger: TGAACTGAGTAACCGTGTTCCTGAAAAGTACACTAGGGAAATTCACCTGCTTGCTTGTCTTTGTATTGGCATGGCACTTGTGATTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp GACCAATTTAATAGCTCTGAGCATGCTCCATGGTGCAATCACAAGTaGCATGCCAATACAAAGACAAGCAAGCAGGTGAATTTCCCTAGT +
Preference number: 1 (lower is better)
Translates to: DQFNSSEHAPWCNHK*HANTKTSKQVNFPS
Trigger: ACTAGGGAAATTCACCTGCTTGCTTGTCTTTGTATTGGCATGGCACTTGTGATTGCACCATGGAGCATGCTCAGAGCTATTAAATTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 90 bp GACTCAAGTCCCATGGTATTGTTCTTATCCAATGGGACCTCTCCTTaGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGAA +
Preference number: 1 (lower is better)
Translates to: DSSPMVLFLSNGTSP*EYNSFPRGIMVSQE
Trigger: TTCTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCCCATTGGATAAGAACAATACCATGGGACTTGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp CCTGGCTGGAAGCTCAAGTCTAGGAGAGCTATTTTACTGCACTGTTaGGATGTTCTCTGCAAGGTAGTCACAGATAATAAGCAATTTAGT +
Preference number: 1 (lower is better)
Translates to: PGWKLKSRRAILLHC*DVLCKVVTDNKQFS
Trigger: ACTAAATTGCTTATTATCTGTGACTACCTTGCAGAGAACATCTCAACAGTGCAGTAAAATAGCTCTCCTAGACTTGAGCTTCCAGCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp CTACTACTGGCCTTCCACTTCCTCTCTCTGATACACCTAAGAAGGTaGGAGACACTAGCTTCAATTCCATTTTACAACAGTTCTCAACAA +
Preference number: 1 (lower is better)
Translates to: LLLAFHFLSLIHLRR*ETLASIPFYNSSQQ
Trigger: TTGTTGAGAACTGTTGTAAAATGGAATTGAAGCTAGTGTCTCTCACCTTCTTAGGTGTATCAGAGAGAGGAAGTGGAAGGCCAGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp CCATTCATGTCACTGAAAAATACTTCTTGGCACAGTTCACTTTCCTaGCCCAAAGACACCAACAACAATCAAAACTGCACTTTCAGGGTA +
Preference number: 1 (lower is better)
Translates to: PFMSLKNTSWHSSLS*PKDTNNNQNCTFRV
Trigger: TACCCTGAAAGTGCAGTTTTGATTGTTGTTGGTGTCTTTGGGTCAGGAAAGTGAACTGTGCCAAGAAGTATTTTTCAGTGACATGAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp TTATTTAATCACCATTCAATAATCTCCTCCCTCCCCATAGCTGCTTaGGTTAACTGTCCCACAAGTGTCCTGTGTTTTGTAAAGATGAGG +
Preference number: 1 (lower is better)
Translates to: LFNHHSIISSLPIAA*VNCPTSVLCFVKMR
Trigger: CCTCATCTTTACAAAACACAGGACACTTGTGGGACAGTTAACTCAAGCAGCTATGGGGAGGGAGGAGATTATTGAATGGTGATTAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp CCTGAGCAACACATCTATGTCCATTCACAGATGGAAATGAAAGAGTaGGATTCTCAGAGGCTAAACAACATTCTGGGAGCAAATTGGATT +
Preference number: 1 (lower is better)
Translates to: PEQHIYVHSQMEMKE*DSQRLNNILGANWI
Trigger: AATCCAATTTGCTCCCAGAATGTTGTTTAGCCTCTGAGAATCTCACTCTTTCATTTCCATCTGTGAATGGACATAGATGTGTTGCTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp TGGCAAGATAATAAAGAGGTTAAAGAGGCTACGTGGATCTGTCACTaGTTTAGCTTACCATTTTCAATTCAGCACCAAAGTGCTCAGAAA +
Preference number: 1 (lower is better)
Translates to: WQDNKEVKEATWICH*FSLPFSIQHQSAQK
Trigger: TTTCTGAGCACTTTGGTGCTGAATTGAAAATGGTAAGCTAAAGCAGTGACAGATCCACGTAGCCTCTTTAACCTCTTTATTATCTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 90 bp GACAGCCAACTCTCATTTCTCTTAAAGCAAAAATTCATTCCACTGTaGTTTCTCCAGGTATTTCCTGCAATTCTAAATCCGCCCTTGATA +
Preference number: 1 (lower is better)
Translates to: DSQLSFLLKQKFIPL*FLQVFPAILNPPLI
Trigger: TATCAAGGGCGGATTTAGAATTGCAGGAAATACCTGGAGAAATCACAGTGGAATGAATTTTTGCTTTAAGAGAAATGAGAGTTGGCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 90 bp CATCCTGTTATATTTGCTGTGAGGAAAATTAAGATTCCTGTTGTATaGGCTGCACTGTTTCTGGAAGACTACAGAAAATCTAACATGGTT +
Preference number: 1 (lower is better)
Translates to: HPVIFAVRKIKIPVV*AALFLEDYRKSNMV
Trigger: AACCATGTTAGATTTTCTGTAGTCTTCCAGAAACAGTGCAGCCCATACAACAGGAATCTTAATTTTCCTCACAGCAAATATAACAGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 90 bp TCTTTTTGTCAGTTAAGAAAGCGTAAGCACAATCTCTCAGTCAATTaGATTAACAGGAATCCATTCATGTCACTGAAAAATACTTCTTGG +
Preference number: 1 (lower is better)
Translates to: SFCQLRKRKHNLSVN*INRNPFMSLKNTSW
Trigger: CCAAGAAGTATTTTTCAGTGACATGAATGGATTCCTGTTAATGCAATTGACTGAGAGATTGTGCTTACGCTTTCTTAACTGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAGGCTGTGCAGTGCAATaGAGAAGGCGGAAATCCTGC +
Preference number: 2 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSGCAVQ*RRRKSC
Trigger: GCAGGATTTCCGCCTTCTGCATTGCACTGCACAGCC...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATGTTCCATGGGGCTGTaGAGTGCAATGCAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSCSMGL*SAMQKA
Trigger: CGCCTTCTGCATTGCACTGCACAGCCCCATGGAACA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCACAGGCTGGACGACAGTaGTGCAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSQAGRQ*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACCACTGTCGTCCAGCCTG...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATACTCCCAGAGGGCAGTaGCCTACTCTGCTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYTPRGQ*PTLLPR
Trigger: TCTGGGGAGCAGAGTAGGTCACTGCCCTCTGGGAGT...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCATCCCAGGACCTGTGGTaGCCTCAAGCTAACCTGATG +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSSQDLW*PQANLM
Trigger: CATCAGGTTAGCTTGAGGTCACCACAGGTCCTGGGA...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTAGAAGGCGGAAATCCTaGTGTGACGCCACCCTCGAG +
Preference number: 2 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLRRRKS*CDATLE
Trigger: CTCGAGGGTGGCGTCACAGCAGGATTTCCGCCTTCT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAGCAACATCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSATSTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGATGTTGC...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATGTTTCTATCAAGCCTaGATGAGGTCAGCTCTGGTA +
Preference number: 2 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSCFYQA*MRSALV
Trigger: TACCAGAGCTGACCTCATTCAGGCTTGATAGAAACA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAGCAGGGGAAGGCTGTTaGCCTCTCTTCAGAGGACTG +
Preference number: 2 (lower is better)
Translates to: RLNNILGANWIFEGRVLLAGEGC*PLFRGL
Trigger: CAGTCCTCTGAAGAGAGGCCAACAGCCTTCCCCTGC...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGCTTCCTGTTTCTTTCTaGGCAGGGAAATACAGCTTA +
Preference number: 2 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWLPVSF*AGKYSL
Trigger: TAAGCTGTATTTCCCTGCCCAGAAAGAAACAGGAAG...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATTGTTTTTACAGATCTaGGCTGAGGCCATTTGCTCC +
Preference number: 2 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSLFLQI*AEAICS
Trigger: GGAGCAAATGGCCTCAGCCCAGATCTGTAAAAACAA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATTTGATCCTTCCAGATaGCTCAGCCTAGATCTAGCA +
Preference number: 2 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSFDPSR*LSLDLA
Trigger: TGCTAGATCTAGGCTGAGCCATCTGGAAGGATCAAA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATTTTACAGATCTGGGCTaGGGCCATTTGCTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYFTDLG*GHLLLA
Trigger: AGCAAGGAGCAAATGGCCTCAGCCCAGATCTGTAAA...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAGGGCAGATGGAGTGGTaGACACTTGTGAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSGQMEW*TLVKTK
Trigger: TTTTGTTTTCACAAGTGTCCACCACTCCATCTGCCC...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CAA 90 bp TATGGGCTGCACTGTTTCTGGAAGACTACAGAAAATCTAACATGGTaGACACTTCCTGGTAGCCCTTCTGTACATACACACACACACACC +
Preference number: 2 (lower is better)
Translates to: YGLHCFWKTTENLTW*TLPGSPSVHTHTHT
Trigger: GGTGTGTGTGTGTGTATGTACAGAAGGGCTACCAGGAAGTGTCAACCATGTTAGATTTTCTGTAGTCTTCCAGAAACAGTGCAGCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CAA 90 bp CTCATTAAGCAAAGGCCCTCCAAGTCTCCTTTTTACTTCAGCACTTaGGAAACTCTCCAAGACTTAACTTCCGATCTGGGGAGGTTCTAC +
Preference number: 2 (lower is better)
Translates to: LIKQRPSKSPFYFST*ETLQDLTSDLGRFY
Trigger: GTAGAACCTCCCCAGATCGGAAGTTAAGTCTTGGAGAGTTTCCAAAGTGCTGAAGTAAAAAGGAGACTTGGAGGGCCTTTGCTTAATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTCCACCATGCCTTATTTaGAAGAGGAGGCCTGTGAGA +
Preference number: 2 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISPPCLI*KRRPVR
Trigger: TCTCACAGGCCTCCTCTTTCAAATAAGGCATGGTGG...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAAACACAATTGGCAAATaGAGCCAGCACGAAACTGTA +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSNTIGK*SQHETV
Trigger: TACAGTTTCGTGCTGGCTTCATTTGCCAATTGTGTT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGTGTTCCCAAAAGTGCTaGACACTAAATGACACAGGG +
Preference number: 2 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKCSQKC*TLNDTG
Trigger: CCCTGTGTCATTTAGTGTTCAGCACTTTTGGGAACA...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACTCTACAGTCAATGACTaGGAAATAGAGAAAGGACAG +
Preference number: 2 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDSTVND*EIEKGQ
Trigger: CTGTCCTTTCTCTATTTCCCAGTCATTGACTGTAGA...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATTTAATTTCACATCTTaGCTAAGGAGATGCCACTGG +
Preference number: 2 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSFNFTS*LRRCHW
Trigger: CCAGTGGCATCTCCTTAGCCAAGATGTGAAATTAAA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAACAGAAAATCTAACATaGTTGACACTTCCTGGTAGC +
Preference number: 2 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSTENLT*LTLPGS
Trigger: GCTACCAGGAAGTGTCAACCATGTTAGATTTTCTGT...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATGAGTCAACTGACTGCTaGAGGAACAGAAGCAATGAC +
Preference number: 2 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYESTDC*RNRSND
Trigger: GTCATTGCTTCTGTTCCTCCAGCAGTCAGTTGACTC...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCACATATCTACAGTCAATaGCTGGGAAATAGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSHIYSQ*LGNRER
Trigger: CCTTTCTCTATTTCCCAGTCATTGACTGTAGATATG...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGAATACACCCTTTCTTTaGTGCCCACCATGCCTTATT +
Preference number: 2 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKNTPFL*CPPCLI
Trigger: AATAAGGCATGGTGGGCAGCAAAGAAAGGGTGTATT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACTCCAAAGGAGAGTATaGCTAAACTCTCTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: RLNNILGANWIFEGRVLLLQRRV*LNSLGS
Trigger: GGAGCCCAGAGAGTTTAGGCATACTCTCCTTTGGAG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATCTAGAGTCAACTGACTaGTGGAGGAACAGAAGCAAT +
Preference number: 2 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYLESTD*WRNRSN
Trigger: ATTGCTTCTGTTCCTCCAGCAGTCAGTTGACTCTAG...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAAGCCTACCAAGTAGCTaGGATTACAGGAGTGCACCA +
Preference number: 2 (lower is better)
Translates to: RLNNILGANWIFEGRVLLSLPSS*DYRSAP
Trigger: TGGTGCACTCCTGTAATCCCAGCTACTTGGTAGGCT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAAGGCATTACATGGGCTaGCTCCTAATATCAAAACAA +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSRHYMG*LLISKQ
Trigger: TTGTTTTGATATTAGGAGCCAGCCCATGTAATGCCT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATAAGGACAGGGCAACCTaGCCAGCCACTAGCATCGAA +
Preference number: 2 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHKDRAT*PATSIE
Trigger: TTCGATGCTAGTGGCTGGGCAGGTTGCCCTGTCCTT...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCATCTACTGTCAACATGTaGGGCAGAATTCAATTTCTA +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSSTVNM*GRIQFL
Trigger: TAGAAATTGAATTCTGCCCCACATGTTGACAGTAGA...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTGGTGTAAGGCATATATaGACACAAAGAGAGGCCATT +
Preference number: 2 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLGVRHI*TQREAI
Trigger: AATGGCCTCTCTTTGTGTCCATATATGCCTTACACC...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTTATCCTGGTGGGAGATaGGAGACCAATTTAATAGCT +
Preference number: 2 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLYPGGR*ETNLIA
Trigger: AGCTATTAAATTGGTCTCCCATCTCCCACCAGGATA...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCATTCCCAGAGGTATCATaGTATCCCAAGAATATAACT +
Preference number: 2 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSFPEVS*YPKNIT
Trigger: AGTTATATTCTTGGGATACCATGATACCTCTGGGAA...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATAATGGGACCTCTCCTTaGGAATATAATTCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYNGTSP*EYNSFP
Trigger: GGGAAAGGAATTATATTCCCAAGGAGAGGTCCCATT...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAGGGACAGGACTACATTaGTGCACCTGCAAAGTAAAG +
Preference number: 2 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKGTGLH*CTCKVK
Trigger: CTTTACTTTGCAGGTGCATCAATGTAGTCCTGTCCC...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTCAGTTTCAACAATTCTaGTGTTGGACAAAGCCTCTT +
Preference number: 2 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLQFQQF*CWTKPL
Trigger: AAGAGGCTTTGTCCAACATCAGAATTGTTGAAACTG...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAACACTACACCCAGCCCTaGAGTCCCTTTTTAAAGAGT +
Preference number: 2 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKHYTQP*SPFLKS
Trigger: ACTCTTTAAAAAGGGACTGCAGGGCTGGGTGTAGTG...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTTCAGCTCAAGTAGTGTaGCCAAATCATCACAAAATG +
Preference number: 2 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLSAQVV*PNHHKM
Trigger: CATTTTGTGATGATTTGGGCACACTACTTGAGCTGA...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATCTGGCAAAACGACAATaGTGCTGTTTTTGTATCCTT +
Preference number: 2 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYLAKRQ*CCFCIL
Trigger: AAGGATACAAAAACAGCAGCATTGTCGTTTTGCCAG...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTGTAGACTTTAATGGATaGTCCAGCAATAACCAGAAT +
Preference number: 2 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLVDFNG*SSNNQN
Trigger: ATTCTGGTTATTGCTGGAGCATCCATTAAAGTCTAC...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATAAAGGCCATGAGTCCTaGGAGCACTATGAAGGTAGC +
Preference number: 2 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHKGHES*EHYEGS
Trigger: GCTACCTTCATAGTGCTCCCAGGACTCATGGCCTTT...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAAAGATTCCTGTTGTATaGGCTGCACTGTTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: RLNNILGANWIFEGRVLLKIPVV*AALFLE
Trigger: TTCCAGAAACAGTGCAGCCCATACAACAGGAATCTT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CAA 90 bp ATCCCAGTGCAACAGAAAACAGCACCAGTTTCAACAATTCTGATGTaGGACAAAGCCTCTTTTTGTCAGTTAAGAAAGCGTAAGCACAAT +
Preference number: 2 (lower is better)
Translates to: IPVQQKTAPVSTILM*DKASFCQLRKRKHN
Trigger: ATTGTGCTTACGCTTTCTTAACTGACAAAAAGAGGCTTTGTCCAACATCAGAATTGTTGAAACTGGTGCTGTTTTCTGTTGCACTGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACAATCACAAGTGCCATaGCAATACAAAGACAAGCAA +
Preference number: 2 (lower is better)
Translates to: RLNNILGANWIFEGRVLLQSQVP*QYKDKQ
Trigger: TTGCTTGTCTTTGTATTGGCATGGCACTTGTGATTG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATAATCTCTCAGTCAATTaGATTAACAGGAATCCATTC +
Preference number: 2 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYNLSVN*INRNPF
Trigger: GAATGGATTCCTGTTAATGCAATTGACTGAGAGATT...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAACGTGGATCTGTCACTaGTTTAGCTTACCATTTTCA +
Preference number: 2 (lower is better)
Translates to: RLNNILGANWIFEGRVLLTWICH*FSLPFS
Trigger: TGAAAATGGTAAGCTAAAGCAGTGACAGATCCACGT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAATCTGTGTGTGAAGATTaGGGGAGAGGATGTAAACTA +
Preference number: 2 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKSVCED*GRGCKL
Trigger: TAGTTTACATCCTCTCCCCCAATCTTCACACACAGA...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACAGACTCAAGTCCCATaGTATTGTTCTTATCCAATG +
Preference number: 2 (lower is better)
Translates to: RLNNILGANWIFEGRVLLQTQVP*YCSYPM
Trigger: CATTGGATAAGAACAATACCATGGGACTTGAGTCTG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR TCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAAATGACACAGGGCTATaGGGTACATACATTTCTTTT +
Preference number: 2 (lower is better)
Translates to: RLNNILGANWIFEGRVLLNDTGL*GTYISF
Trigger: AAAAGAAATGTATGTACCTCATAGCCCTGTGTCATT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATTCTTGGCTAAGGAGATaGCACTGGAGTACAGAGATA +
Preference number: 2 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHSWLRR*HWSTEI
Trigger: TATCTCTGTACTCCAGTGGCATCTCCTTAGCCAAGA...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAATTGTTCTTATCCAATaGGACCTCTCCTTGGGAATA +
Preference number: 2 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKIVLIQ*DLSLGI
Trigger: TATTCCCAAGGAGAGGTCCCATTGGATAAGAACAAT...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATTGGTGCAATCACAAGTaGCATGCCAATACAAAGACA +
Preference number: 2 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHWCNHK*HANTKT
Trigger: TGTCTTTGTATTGGCATGGCACTTGTGATTGCACCA...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATTCCCAAGAATATAACTaGTCTTTGGCTCTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHSQEYN*SLALCV
Trigger: CACACACAGAGCCAAAGAGCAGTTATATTCTTGGGA...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR GCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAAACAGAACTTTAGAATaGTCTAGGTCAGGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKNRTLE*SRSGKE
Trigger: TTCTTTTCCTGACCTAGAGCATTCTAAAGTTCTGTT...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 72 bp CTGTGCAGTGCAATGCAGAAGGCGGAAATCCTGCTGTaGCGCCACCCTCGAGACCTTCTGCAGCCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: LCSAMQKAEILL*RHPRDLLQPER
Trigger: CCTCTCAGGCTGCAGAAGGTCTCGAGGGTGGCGTCACAGCAGGATTTCCGCCTTCTGCATTGCACTGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp CGGAAATCCTGCTGTGACGCCACCCTCGAGACCTTCTaGAGCCTGAGAGGGGGTGATACTCCCACACCCTTT +
Preference number: 3 (lower is better)
Translates to: RKSCCDATLETF*SLRGGDTPTPF
Trigger: AAAGGGTGTGGGAGTATCACCCCCTCTCAGGCTGCAGAAGGTCTCGAGGGTGGCGTCACAGCAGGATTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp CAAGTGCCTCATGTTCCATGGGGCTGTGCAGTGCAATaGAGAAGGCGGAAATCCTGCTGTGACGCCACCCTC +
Preference number: 3 (lower is better)
Translates to: QVPHVPWGCAVQ*RRRKSCCDATL
Trigger: GAGGGTGGCGTCACAGCAGGATTTCCGCCTTCTGCATTGCACTGCACAGCCCCATGGAACATGAGGCACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp ACAGCACAGAGGATGACTCTAGGGTGCTCTCCCACTTaGTCCAAGTTAGGCAGGTGCCCTGATGGAGGCAAG +
Preference number: 3 (lower is better)
Translates to: TAQRMTLGCSPT*SKLGRCPDGGK
Trigger: CTTGCCTCCATCAGGGCACCTGCCTAACTTGGAGCAAGTGGGAGAGCACCCTAGAGTCATCCTCTGTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp CTCAGCCTAGATCTAGCAGTGAGAGAGCCCTCTCCATaGAGGGCAGATGGAGTGGTGGACACTTGTGAAAAC +
Preference number: 3 (lower is better)
Translates to: LSLDLAVREPSP*RADGVVDTCEN
Trigger: GTTTTCACAAGTGTCCACCACTCCATCTGCCCTGCATGGAGAGGGCTCTCTCACTGCTAGATCTAGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp AGGTGCCCTGATGGAGGCAAGGCTGAGCCATTAACATaGACAGCTCCATATCCTGGAAGCCTCTGTAGCCTT +
Preference number: 3 (lower is better)
Translates to: RCPDGGKAEPLT*TAPYPGSLCSL
Trigger: AAGGCTACAGAGGCTTCCAGGATATGGAGCTGTGCATGTTAATGGCTCAGCCTTGCCTCCATCAGGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 72 bp TCCCAAGTGACACAGAAACACAGCTCCTCCGGATGGTaGAGTCTCCGCTGCAAAACTCACGAAACAGCACAG +
Preference number: 3 (lower is better)
Translates to: SQVTQKHSSSGW*SLRCKTHETAQ
Trigger: CTGTGCTGTTTCGTGAGTTTTGCAGCGGAGACTTCACCATCCGGAGGAGCTGTGTTTCTGTGTCACTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp AAAACTCACGAAACAGCACAGAGGATGACTCTAGGGTaGTCTCCCACTTGCTCCAAGTTAGGCAGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: KTHETAQRMTLG*SPTCSKLGRCP
Trigger: AGGGCACCTGCCTAACTTGGAGCAAGTGGGAGAGCACCCTAGAGTCATCCTCTGTGCTGTTTCGTGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp ACATGCAGACTCACTGTGAGCGAGAGGCTAGGGATCTaGCCTAAACATAGGAACCTGTTTCTATCAAGCCTG +
Preference number: 3 (lower is better)
Translates to: TCRLTVSERLGI*PKHRNLFLSSL
Trigger: CAGGCTTGATAGAAACAGGTTCCTATGTTTAGGGCAGATCCCTAGCCTCTCGCTCACAGTGAGTCTGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 72 bp TGCCACTGGGCCCTGGACTCTGATGTTTCTGATCCCTaGGCAACACATCTATGTCCATTCACAGATGGAAAT +
Preference number: 3 (lower is better)
Translates to: CHWALDSDVSDP*ATHLCPFTDGN
Trigger: ATTTCCATCTGTGAATGGACATAGATGTGTTGCTCAGGGATCAGAAACATCAGAGTCCAGGGCCCAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp GAACTCCCTCATGTTCTTGGGAGGACACAAGCCTCTTaGTCATTAAGCAAAGGCCCTCCAAGTCTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: ELPHVLGRTQAS*SLSKGPPSLLF
Trigger: AAAAAGGAGACTTGGAGGGCCTTTGCTTAATGAGCAAGAGGCTTGTGTCCTCCCAAGAACATGAGGGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAGGCAGGGGAAGGCTGTaGGCCTCTCTTCAGAGGACT +
Preference number: 3 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKGRGRL*ASLQRT
Trigger: AGTCCTCTGAAGAGAGGCCAACAGCCTTCCCCTGCC...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGGGTGAGAGGGAAGATTaGCACTTCAGTCTAGTTTCC +
Preference number: 3 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKGERED*HFSLVS
Trigger: GGAAACTAGACTGAAGTGCAAATCTTCCCTCTCACC...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 72 bp TTACGTGGCCTCCCATATGGACCTTTCATATCCTGGTaGGAGATGGGAGACCAATTTAATAGCTCTGAGCAT +
Preference number: 3 (lower is better)
Translates to: LRGLPYGPFISW*EMGDQFNSSEH
Trigger: ATGCTCAGAGCTATTAAATTGGTCTCCCATCTCCCACCAGGATATGAAAGGTCCATATGGGAGGCCACGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 72 bp GGACGACTTCTTAAAGGGATTCACAGGCAATATTACTaGCAAAATGATTTTCCAAAGCTGAGCCACGCGCCC +
Preference number: 3 (lower is better)
Translates to: GRLLKGIHRQYY*QNDFPKLSHAP
Trigger: GGGCGCGTGGCTCAGCTTTGGAAAATCATTTTGCCAGTAATATTGCCTGTGAATCCCTTTAAGAAGTCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTCAATACACCCTTTCTTaGCTGCCCACCATGCCTTAT +
Preference number: 3 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLQYTLS*LPTMPY
Trigger: ATAAGGCATGGTGGGCAGCAAAGAAAGGGTGTATTG...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 72 bp CACCATTCAATAATCTCCTCCCTCCCCATAGCTGCTTaGGTTAACTGTCCCACAAGTGTCCTGTGTTTTGTA +
Preference number: 3 (lower is better)
Translates to: HHSIISSLPIAA*VNCPTSVLCFV
Trigger: TACAAAACACAGGACACTTGTGGGACAGTTAACTCAAGCAGCTATGGGGAGGGAGGAGATTATTGAATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp AATAGCTCTGAGCATGCTCCATGGTGCAATCACAAGTaGCATGCCAATACAAAGACAAGCAAGCAGGTGAAT +
Preference number: 3 (lower is better)
Translates to: NSSEHAPWCNHK*HANTKTSKQVN
Trigger: ATTCACCTGCTTGCTTGTCTTTGTATTGGCATGGCACTTGTGATTGCACCATGGAGCATGCTCAGAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTAGGGACAGGACTACATaGATGCACCTGCAAAGTAAA +
Preference number: 3 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLRDRTT*MHLQSK
Trigger: TTTACTTTGCAGGTGCATCAATGTAGTCCTGTCCCT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 72 bp GCCTTCCACTTCCTCTCTCTGATACACCTAAGAAGGTaGGAGACACTAGCTTCAATTCCATTTTACAACAGT +
Preference number: 3 (lower is better)
Translates to: AFHFLSLIHLRR*ETLASIPFYNS
Trigger: ACTGTTGTAAAATGGAATTGAAGCTAGTGTCTCTCACCTTCTTAGGTGTATCAGAGAGAGGAAGTGGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp TCTTCTTCTGTCCTGAGTTTGGTAGACTTTAATGGATaGTCCAGCAATAACCAGAATCTAGGACATGCAGAC +
Preference number: 3 (lower is better)
Translates to: SSSVLSLVDFNG*SSNNQNLGHAD
Trigger: GTCTGCATGTCCTAGATTCTGGTTATTGCTGGAGCATCCATTAAAGTCTACCAAACTCAGGACAGAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 72 bp CCCATGGTATTGTTCTTATCCAATGGGACCTCTCCTTaGGAATATAATTCCTTTCCCAGAGGTATCATGGTA +
Preference number: 3 (lower is better)
Translates to: PMVLFLSNGTSP*EYNSFPRGIMV
Trigger: TACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCCCATTGGATAAGAACAATACCATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATAAAGAGAGGCCATTGTaGGCAATAAATAGCATTACG +
Preference number: 3 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYKERPL*AINSIT
Trigger: CGTAATGCTATTTATTGCCAACAATGGCCTCTCTTT...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAACCTGCAAAGTAAAGTaGGATGCTTCAGAGCACATG +
Preference number: 3 (lower is better)
Translates to: RLNNILGANWIFEGRVLLTCKVK*DASEHM
Trigger: CATGTGCTCTGAAGCATCCAACTTTACTTTGCAGGT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 72 bp CACATCTATGTCCATTCACAGATGGAAATGAAAGAGTaGGATTCTCAGAGGCTAAACAACATTCTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: HIYVHSQMEMKE*DSQRLNNILGA
Trigger: TGCTCCCAGAATGTTGTTTAGCCTCTGAGAATCTCACTCTTTCATTTCCATCTGTGAATGGACATAGATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTATGTGTGAATAGTAAGTaGGCATTCAGACTCAAGTCC +
Preference number: 3 (lower is better)
Translates to: RLNNILGANWIFEGRVLLCVNSK*AFRLKS
Trigger: GGACTTGAGTCTGAATGCCAACTTACTATTCACACA...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 72 bp TCACTGAAAAATACTTCTTGGCACAGTTCACTTTCCTaGCCCAAAGACACCAACAACAATCAAAACTGCACT +
Preference number: 3 (lower is better)
Translates to: SLKNTSWHSSLS*PKDTNNNQNCT
Trigger: AGTGCAGTTTTGATTGTTGTTGGTGTCTTTGGGTCAGGAAAGTGAACTGTGCCAAGAAGTATTTTTCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR TCA 72 bp TCTGCCCTAAACATAGGAACCTGTTTCTATCAAGCCTaGATGAGGTCAGCTCTGGTAGAATTAATGACAAAT +
Preference number: 3 (lower is better)
Translates to: SALNIGTCFYQA*MRSALVELMTN
Trigger: ATTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTTCCTATGTTTAGGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAGAATATAACTGCTCTTaGGCTCTGTGTGTGAAGATT +
Preference number: 3 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKEYNCS*ALCVKI
Trigger: AATCTTCACACACAGAGCCAAAGAGCAGTTATATTC...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATTCAAGTCCCATGGTATaGTTCTTATCCAATGGGACC +
Preference number: 3 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHSSPMV*FLSNGT
Trigger: GGTCCCATTGGATAAGAACAATACCATGGGACTTGA...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp AATAAAGAGGTTAAAGAGGCTACGTGGATCTGTCACTaGTTTAGCTTACCATTTTCAATTCAGCACCAAAGT +
Preference number: 3 (lower is better)
Translates to: NKEVKEATWICH*FSLPFSIQHQS
Trigger: ACTTTGGTGCTGAATTGAAAATGGTAAGCTAAAGCAGTGACAGATCCACGTAGCCTCTTTAACCTCTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR-3UTR CAA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATGGAAGAATGTGTTTTTaGAATTCCACCTGGCACTTG +
Preference number: 3 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHGRMCF*NSTWHL
Trigger: CAAGTGCCAGGTGGAATTCAAAAAACACATTCTTCC...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CCA 72 bp AAATTAAGATTCCTGTTGTATGGGCTGCACTGTTTCTaGAAGACTACAGAAAATCTAACATGGTTGACACTT +
Preference number: 3 (lower is better)
Translates to: KLRFLLYGLHCF*KTTENLTWLTL
Trigger: AAGTGTCAACCATGTTAGATTTTCTGTAGTCTTCCAGAAACAGTGCAGCCCATACAACAGGAATCTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR GCA 72 bp CAGTTAAGAAAGCGTAAGCACAATCTCTCAGTCAATTaGATTAACAGGAATCCATTCATGTCACTGAAAAAT +
Preference number: 3 (lower is better)
Translates to: QLRKRKHNLSVN*INRNPFMSLKN
Trigger: ATTTTTCAGTGACATGAATGGATTCCTGTTAATGCAATTGACTGAGAGATTGTGCTTACGCTTTCTTAACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGCCTCCTCGGGCTCCATaGCTCCTCCAGGGACAATCC +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWPPRAP*LLQGQS
Trigger: GGATTGTCCCTGGAGGAGGCATGGAGCCCGAGGAGG...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGACCGCGCCGCCATCTTaGGCGCGATGCGTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKTAPPS*ARCVSG
Trigger: GCCGCTGACGCATCGCGCCCAAGATGGCGGCGCGGT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAAAGGTGGGGCCTCACTaGCTCCTCAGAGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSKVGPH*LLRAHP
Trigger: GGGATGGGCTCTGAGGAGGCAGTGAGGCCCCACCTT...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACTCACGAGGGATGGGGTaGGCGGGCAGGTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDSRGMG*AGRFLS
Trigger: AGACAGAAACCTGCCCGCTCACCCCATCCCTCGTGA...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAGGGTCTGGTTCGACTTaGGCTTCATCATCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSGSGST*ASSSSG
Trigger: CCCGGAGGATGATGAAGCTCAAGTCGAACCAGACCC...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTCCCAGGACCTGTGGTaGCCTCAAGCTAACCTGATG +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWSQDLW*PQANLM
Trigger: CATCAGGTTAGCTTGAGGTCACCACAGGTCCTGGGA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACTGGCCACGACTGGGGTaGCATTGTTGGCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDWPRLG*HCWLSS
Trigger: GCTACTCAGCCAACAATGGCACCCCAGTCGTGGCCA...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAGGGTGCTCTCCCACTTaGTCCAAGTTAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSGCSPT*SKLGRC
Trigger: GCACCTGCCTAACTTGGAGCAAGTGGGAGAGCACCC...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACTGGAGCAAACCAAGGTaGGGCCTCACTGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDWSKPR*GLTASS
Trigger: TGAGGAGGCAGTGAGGCCCCACCTTGGTTTGCTCCA...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGCAGTCATCTGATGCCTaGCATCGAGCTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWQSSDA*HRALSR
Trigger: TCTGCTCAGAGCTCGATGTCAGGCATCAGATGACTG...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGCTAAGCAAGCAAGCCTaGGAGGCATTACATGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWLSKQA*EALHGL
Trigger: CAGCCCATGTAATGCCTCTCAGGCTTGCTTGCTTAG...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGGGAAGAGGCCAGCCCTaGGCGGGCAAGAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKGRGQP*AGKKKS
Trigger: GCTTTTCTTCTTGCCCGCTCAGGGCTGGCCTCTTCC...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACGACTTCACGAACTGCTaGCACACTTGGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDDFTNC*HTWLLL
Trigger: GAGGAGGAGCCAAGTGTGGCAGCAGTTCGTGAAGTC...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAAGAGAGCCCTCTCCATaGAGGGCAGATGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSREPSP*RADGVV
Trigger: CACCACTCCATCTGCCCTGCATGGAGAGGGCTCTCT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAGGCAGTGACCTACTCTaGTCCCCAGAGGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSGSDLL*SPEAPR
Trigger: TCTTGGAGCCTCTGGGGAGCAGAGTAGGTCACTGCC...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGAGGATGACTCTAGGGTaGTCTCCCACTTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWRMTLG*SPTCSK
Trigger: CTTGGAGCAAGTGGGAGAGCACCCTAGAGTCATCCT...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAGCAGGAGTCGAGGGGTaGGGAGCCCGCTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKAGVEG*GARSGR
Trigger: CCGTCCAGAGCGGGCTCCCCACCCCTCGACTCCTGC...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAAAACCGAGTATGTGGTaGCCACGACTGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSKPSMW*PRLGCH
Trigger: ATGGCACCCCAGTCGTGGCCACCACATACTCGGTTT...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCACAGAAACCGAGTATGTaGTGGCCACGACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSQKPSM*WPRLGC
Trigger: GCACCCCAGTCGTGGCCACCACATACTCGGTTTCTG...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCACTGGTCTCAAACTCCTaGCCTCAAGTGACCCACCTG +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSLVSNS*PQVTHL
Trigger: CAGGTGGGTCACTTGAGGCCAGGAGTTTGAGACCAG...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTGGGGAGGTTCTACGTaGAGCAGACCTATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWWGGST*SRPIPS
Trigger: AGAAGGGATAGGTCTGCTCCACGTAGAACCTCCCCA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACGCAACACCATGCCACTaGGCCCTGGACTCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDATPCH*ALDSDV
Trigger: AACATCAGAGTCCAGGGCCCAGTGGCATGGTGTTGC...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTACTCCCAGAGGGCAGTaGCCTACTCTGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLTPRGQ*PTLLPR
Trigger: TCTGGGGAGCAGAGTAGGTCACTGCCCTCTGGGAGT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTCCTCCTCGCTCTCGCTaGGGAAACACAGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISPPRSR*GNTGMR
Trigger: CCGCATGCCTGTGTTTCCGCAGCGAGAGCGAGGAGG...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGACCCTCGAGACCTTCTaGAGCCTGAGAGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKTLETF*SLRGGD
Trigger: ATCACCCCCTCTCAGGCTGCAGAAGGTCTCGAGGGT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAGGGTTTGTGAAAGGCTaGTGGCCTCCAAAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSGFVKG*WPPKES
Trigger: ACTCTCCTTTGGAGGCCAGCAGCCTTTCACAAACCC...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCACTGGGGTGCCATTGTTaGCTGAGTAGCCTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSLGCHC*LSSLAS
Trigger: TGAGGCAAGGCTACTCAGCCAACAATGGCACCCCAG...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGACGTGGCCTCCCATATaGACCTTTCATATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWTWPPI*TFHILV
Trigger: CACCAGGATATGAAAGGTCCATATGGGAGGCCACGT...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACGCCTGCACGGGTTTGTaGTACTGCAGCACTTTTATG +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDACTGL*YCSTFM
Trigger: CATAAAAGTGCTGCAGTATCACAAACCCGTGCAGGC...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGGGGACAGGACTACATTaGTGCACCTGCAAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWGTGLH*CTCKVK
Trigger: CTTTACTTTGCAGGTGCATCAATGTAGTCCTGTCCC...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTGCGGAAATCCTGCTGTaGCGCCACCCTCGAGACCTT +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISAEILL*RHPRDL
Trigger: AAGGTCTCGAGGGTGGCGTCACAGCAGGATTTCCGC...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAACTAATGCAACACCATaGCACTGGGCCCTGGACTCT +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSTNATP*HWALDS
Trigger: AGAGTCCAGGGCCCAGTGGCATGGTGTTGCATTAGT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACATCCATCTGTCTGGATaGCGACTACTGCTCACGAGT +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDIHLSG*RLLLTS
Trigger: ACTCGTGAGCAGTAGTCGCCATCCAGACAGATGGAT...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTAACTGCTGCCACACTTaGCTCCTCCTCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLNCCHT*LLLGLH
Trigger: ATGGAGCCCGAGGAGGAGCCAAGTGTGGCAGCAGTT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATGCAGGGGAAGGCTGTTaGCCTCTCTTCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYAGEGC*PLFRGL
Trigger: CAGTCCTCTGAAGAGAGGCCAACAGCCTTCCCCTGC...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAAAAGGCCATGAGTCCTaGGAGCACTATGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSKGHES*EHYEGS
Trigger: GCTACCTTCATAGTGCTCCCAGGACTCATGGCCTTT...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACACTCCCTCATGTTCTTaGGAGGACACAAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDTPSCS*EDTSLL
Trigger: CAAGAGGCTTGTGTCCTCCCAAGAACATGAGGGAGT...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGGGTGCCATTGTTGGCTaGGTAGCCTTGCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKGAIVG*VALPQC
Trigger: ACATTGAGGCAAGGCTACTCAGCCAACAATGGCACC...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGCAAGAGAGTCTGCAGTaGGCCAGTGTATTATGTAAC +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWQESLQ*ASVLCN
Trigger: GTTACATAATACACTGGCTCACTGCAGACTCTCTTG...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTGTTCCCAAAAGTGCTaGACACTAAATGACACAGGG +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWCSQKC*TLNDTG
Trigger: CCCTGTGTCATTTAGTGTTCAGCACTTTTGGGAACA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCACTCAACTGGGCAGTCTaGCCTCTTCCACAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSLNWAV*PLPQSL
Trigger: TAAAGACTGTGGAAGAGGTCAGACTGCCCAGTTGAG...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTAGCTCCTCCGGATGGTaGAGTCTCCGCTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLSSSGW*SLRCKT
Trigger: AGTTTTGCAGCGGAGACTTCACCATCCGGAGGAGCT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGCTTTCTTCAGCATTCTaGGTTAACACGGGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWLSSAF*VNTGSL
Trigger: TAGGGAACCCGTGTTAACTCAGAATGCTGAAGAAAG...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGGATGTTTCTGATCCCTaGGCAACACATCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWDVSDP*ATHLCP
Trigger: TGGACATAGATGTGTTGCTCAGGGATCAGAAACATC...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTAAGGACAGGGCAACCTaGCCAGCCACTAGCATCGAA +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLKDRAT*PATSIE
Trigger: TTCGATGCTAGTGGCTGGGCAGGTTGCCCTGTCCTT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTCTTGGCTAAGGAGATaGCACTGGAGTACAGAGATA +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWSWLRR*HWSTEI
Trigger: TATCTCTGTACTCCAGTGGCATCTCCTTAGCCAAGA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTCATGGTGTTTACTGTaGCAAGGAGGGAAAATCCCA +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWSWCLL*QGGKIP
Trigger: TGGGATTTTCCCTCCTTGGCACAGTAAACACCATGA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTAGAAGGCGGAAATCCTaGTGTGACGCCACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISRRRKS*CDATLE
Trigger: CTCGAGGGTGGCGTCACAGCAGGATTTCCGCCTTCT...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATTGTTCCATGGGGCTGTaGAGTGCAATGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYCSMGL*SAMQKA
Trigger: CGCCTTCTGCATTGCACTGCACAGCCCCATGGAACA...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATTCCAAGTTAGGCAGGTaGCCTGATGGAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYSKLGR*PDGGKA
Trigger: AGCCTTGCCTCCATCAGGGCACCTGCCTAACTTGGA...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTTGTTTTTACAGATCTaGGCTGAGGCCATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWLFLQI*AEAICS
Trigger: GGAGCAAATGGCCTCAGCCCAGATCTGTAAAAACAA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACATGCTTCAGAGCACATaGATGATACCCAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDMLQST*MIPRSA
Trigger: TGCTGACCTGGGTATCATCCATGTGCTCTGAAGCAT...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAAGCCTACCAAGTAGCTaGGATTACAGGAGTGCACCA +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSSLPSS*DYRSAP
Trigger: TGGTGCACTCCTGTAATCCCAGCTACTTGGTAGGCT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTGTGCCTCATGTTCCATaGGGCTGTGCAGTGCAATGC +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLVPHVP*GCAVQC
Trigger: GCATTGCACTGCACAGCCCCATGGAACATGAGGCAC...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAAGCCTCCCGAGTAGCTaGGACTACAGGAGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLSLPSS*DYRSVP
Trigger: TGGCACGCTCCTGTAGTCCCAGCTACTCGGGAGGCT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAACCCAGTCACGAGGGATaGGGTGAGCGGGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKPSHEG*GERAGF
Trigger: GAAACCTGCCCGCTCACCCCATCCCTCGTGACTGGG...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAAAGTCTTCAGTCATCTaGTGCCTGACATCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSKSSVI*CLTSSS
Trigger: AGAGCTCGATGTCAGGCATCAGATGACTGAAGACTT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGAACCACTGTAATAAGTaGTTACGTGGCCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWNHCNK*LRGLPY
Trigger: ATATGGGAGGCCACGTAATCACTTATTACAGTGGTT...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTGGCTGTGCAGTGCAATaGAGAAGGCGGAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISGCAVQ*RRRKSC
Trigger: GCAGGATTTCCGCCTTCTGCATTGCACTGCACAGCC...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTAAGCAAGGCCTCAAGTaGCTCATGTTCCATGGGGCT +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLKQGLK*LMFHGA
Trigger: AGCCCCATGGAACATGAGGCACTTGAGGCCTTGCTT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAGCTGAGCCATTAACATaGACAGCTCCATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSAEPLT*TAPYPG
Trigger: TCCAGGATATGGAGCTGTGCATGTTAATGGCTCAGC...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACAGGCTGGACGACAGTaGTGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLQAGRQ*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACCACTGTCGTCCAGCCTG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACGGGCAGATGGAGTGGTaGACACTTGTGAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDGQMEW*TLVKTK
Trigger: TTTTGTTTTCACAAGTGTCCACCACTCCATCTGCCC...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCACAATGTTTCAAAATATaGTGCCTGCACGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSQCFKI*CLHGFV
Trigger: CACAAACCCGTGCAGGCATCATATTTTGAAACATTG...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGAAACCTAGAGTCAACTaGCTGCTGGAGGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKKPRVN*LLEEQK
Trigger: CTTCTGTTCCTCCAGCAGTCAGTTGACTCTAGGTTT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATGGTGCAATCACAAGTaGCATGCCAATACAAAGACA +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSWCNHK*HANTKT
Trigger: TGTCTTTGTATTGGCATGGCACTTGTGATTGCACCA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTTTAAGCAATTCTCATaGTTCAGCCTACCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWFKQFS*FSLPSS
Trigger: GCTACTTGGTAGGCTGAAGCATGAGAATTGCTTAAA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTGAGAGGCTAGGGATCTaGCCTAAACATAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLERLGI*PKHRNL
Trigger: CAGGTTCCTATGTTTAGGGCAGATCCCTAGCCTCTC...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTCAGCTCAAGTAGTGTaGCCAAATCATCACAAAATG +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWSAQVV*PNHHKM
Trigger: CATTTTGTGATGATTTGGGCACACTACTTGAGCTGA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGAGGACACAAGCCTCTTaGTCATTAAGCAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKRTQAS*SLSKGP
Trigger: AGGGCCTTTGCTTAATGAGCAAGAGGCTTGTGTCCT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGAACCTACAATTTCAATaGCCTTCCCTCCCACACAGC +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKNLQFQ*PSLPHS
Trigger: GCTGTGTGGGAGGGAAGGGCATTGAAATTGTAGGTT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATGACAATCCATCTGTCTaGATGGCGACTACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYDNPSV*MATTAH
Trigger: GTGAGCAGTAGTCGCCATCCAGACAGATGGATTGTC...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACCTTCCTGTTTCTTTCTaGGCAGGGAAATACAGCTTA +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDLPVSF*AGKYSL
Trigger: TAAGCTGTATTTCCCTGCCCAGAAAGAAACAGGAAG...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTCATGCCACTGGGCCCTaGACTCTGATGTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISHATGP*TLMFLI
Trigger: GATCAGAAACATCAGAGTCCAGGGCCCAGTGGCATG...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CAA 72 bp CAAAGGCCCTCCAAGTCTCCTTTTTACTTCAGCACTTaGGAAACTCTCCAAGACTTAACTTCCGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: QRPSKSPFYFST*ETLQDLTSDLG
Trigger: CCCCAGATCGGAAGTTAAGTCTTGGAGAGTTTCCAAAGTGCTGAAGTAAAAAGGAGACTTGGAGGGCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACCATATCTACAGTCAATaGCTGGGAAATAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDHIYSQ*LGNRER
Trigger: CCTTTCTCTATTTCCCAGTCATTGACTGTAGATATG...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATGTGCTGAACACTAAATaGCACAGGGCTATGAGGTAC +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYVLNTK*HRAMRY
Trigger: GTACCTCATAGCCCTGTGTCATTTAGTGTTCAGCAC...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCACAGTTTCAACAATTCTaGTGTTGGACAAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSQFQQF*CWTKPL
Trigger: AAGAGGCTTTGTCCAACATCAGAATTGTTGAAACTG...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGAAATTCATTCCACTGTaGTTTCTCCAGGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWKFIPL*FLQVFP
Trigger: AGGAAATACCTGGAGAAATCACAGTGGAATGAATTT...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAATGATTTTCCAAAGCTaGGCCACGCGCCCCACCCTA +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKMIFQS*ATRPTL
Trigger: TAGGGTGGGGCGCGTGGCTCAGCTTTGGAAAATCAT...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATTATGCTGCAGGAACTaGGTAACCAAAGCTAGATAT +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSLCCRN*VTKARY
Trigger: ATATCTAGCTTTGGTTACTCAGTTCCTGCAGCATAA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACAGCAAATTGGATTTTTaGAGGGAGAGTCCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDSKLDF*RESPLR
Trigger: TCTAAGAGGACTCTCCCTTCAAAAATCCAATTTGCT...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAATACACCTAAGAAGGTaGGAGACACTAGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSIHLRR*ETLASI
Trigger: AATTGAAGCTAGTGTCTCTCACCTTCTTAGGTGTAT...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACTCAGAGCCCATCCCTaGCCATGTCATTGGATAGGA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLLRAHP*PCHWIG
Trigger: TCCTATCCAATGACATGGTCAGGGATGGGCTCTGAG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAACTGGATGGCGACTACTaGTCACGAGTAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKLDGDY*SRVAPP
Trigger: AGGAGGTGCTACTCGTGAGCAGTAGTCGCCATCCAG...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAACAGACTTCACGAACTaGTGCCACACTTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLTDFTN*CHTWLL
Trigger: GAGGAGCCAAGTGTGGCAGCAGTTCGTGAAGTCTGT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTCACTACACCCAGCCCTaGAGTCCCTTTTTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLHYTQP*SPFLKS
Trigger: ACTCTTTAAAAAGGGACTGCAGGGCTGGGTGTAGTG...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTCTCCAAAGGAGAGTATaGCTAAACTCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISLQRRV*LNSLGS
Trigger: GGAGCCCAGAGAGTTTAGGCATACTCTCCTTTGGAG...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTGGACCTTTCATATCCTaGTGGGAGATGGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISGPFIS*WEMGDQ
Trigger: TTGGTCTCCCATCTCCCACCAGGATATGAAAGGTCC...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTTCCCAGAGGTATCATaGTATCCCAAGAATATAACT +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWFPEVS*YPKNIT
Trigger: AGTTATATTCTTGGGATACCATGATACCTCTGGGAA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACAGGCATTACATGGGCTaGCTCCTAATATCAAAACAA +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDRHYMG*LLISKQ
Trigger: TTGTTTTGATATTAGGAGCCAGCCCATGTAATGCCT...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTGAGTCAACTGACTGCTaGAGGAACAGAAGCAATGAC +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLESTDC*RNRSND
Trigger: GTCATTGCTTCTGTTCCTCCAGCAGTCAGTTGACTC...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACCACCATGCCTTATTTaGAAGAGGAGGCCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLPPCLI*KRRPVR
Trigger: TCTCACAGGCCTCCTCTTTCAAATAAGGCATGGTGG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTCACAGTTCACTTTCCTaGCCCAAAGACACCAACAAC +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISHSSLS*PKDTNN
Trigger: GTTGTTGGTGTCTTTGGGTCAGGAAAGTGAACTGTG...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACTCCCCATAGCTGCTTaGGTTAACTGTCCCACAAGT +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLLPIAA*VNCPTS
Trigger: ACTTGTGGGACAGTTAACTCAAGCAGCTATGGGGAG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATTCATCAGAATCCCAGTaGAACAGAAAACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYSSESQ*NRKQHQ
Trigger: CTGGTGCTGTTTTCTGTTGCACTGGGATTCTGATGA...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATCTACTGTCAACATGTaGGGCAGAATTCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSSTVNM*GRIQFL
Trigger: TAGAAATTGAATTCTGCCCCACATGTTGACAGTAGA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAATTGTTCTTATCCAATaGGACCTCTCCTTGGGAATA +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSIVLIQ*DLSLGI
Trigger: TATTCCCAAGGAGAGGTCCCATTGGATAAGAACAAT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGGGGCTGCACTGTTTCTaGAAGACTACAGAAAATCTA +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKGLHCF*KTTENL
Trigger: TAGATTTTCTGTAGTCTTCCAGAAACAGTGCAGCCC...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGAAGATTCCTGTTGTATaGGCTGCACTGTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKKIPVV*AALFLE
Trigger: TTCCAGAAACAGTGCAGCCCATACAACAGGAATCTT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTACCTATTATTTCTCTaGTTAAGAAGGTTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWYLLFL*LRRFSR
Trigger: CCTGCTAAACCTTCTTAACCAGAGAAATAATAGGTA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTGGGAGTAGAATCTTATaGCCCAGCATTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISGSRIL*PSIGIE
Trigger: CTCAATGCCAATGCTGGGCCATAAGATTCTACTCCC...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATACAAAGTCTTTGAAATaGAGGCTGGGCTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYTKSLK*RLGWQK
Trigger: CTTTTGCCAGCCCAGCCTCCATTTCAAAGACTTTGT...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACAATGACACAGCCTCTTaGTTATTCCATTTTCTATCC +
Preference number: 4 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDNDTAS*LFHFLS
Trigger: GGATAGAAAATGGAATAACCAAGAGGCTGTGTCATT...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CAA 72 bp AACACCAAACAGCAACATTATCAATACACCCTTTCTTaGCTGCCCACCATGCCTTATTTGAAAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: NTKQQHYQYTLS*LPTMPYLKEEA
Trigger: GGCCTCCTCTTTCAAATAAGGCATGGTGGGCAGCAAAGAAAGGGTGTATTGATAATGTTGCTGTTTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATAGACAAGCAAGCAGGTaGATTTCCCTAGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYRQASR*ISLVYF
Trigger: AAAGTACACTAGGGAAATTCACCTGCTTGCTTGTCT...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAAGCAGGAGCCTCCAATaGGCACTGTATGTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLSRSLQ*ALYVEK
Trigger: TTTCTCTACATACAGTGCTCATTGGAGGCTCCTGCT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAGACCTCAAGCTAACCTaGTGCACAGACAACAGTATC +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLDLKLT*CTDNSI
Trigger: GATACTGTTGTCTGTGCATCAGGTTAGCTTGAGGTC...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAATATTACTGGCAAAATaGTTTTCCAAAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSILLAK*FSKAEP
Trigger: TGGCTCAGCTTTGGAAAATCATTTTGCCAGTAATAT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAAATTCTGAGCAAACATaGTCCCAGTCACGAGGGATG +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLNSEQT*SQSRGM
Trigger: CATCCCTCGTGACTGGGAGCATGTTTGCTCAGAATT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTCTGTGCTTCCTCTCCTaGTTCTCAAAAATTCCAACT +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLLCFLS*FSKIPT
Trigger: AGTTGGAATTTTTGAGAACCAGGAGAGGAAGCACAG...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATGGTGTAAGGCATATATaGACACAAAGAGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYGVRHI*TQREAI
Trigger: AATGGCCTCTCTTTGTGTCCATATATGCCTTACACC...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATTCTGTGTGTGAAGATTaGGGGAGAGGATGTAAACTA +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYSVCED*GRGCKL
Trigger: TAGTTTACATCCTCTCCCCCAATCTTCACACACAGA...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATTTTTGAATTCCACCTaGCACTTGGTTAAATCTACT +
Preference number: 4 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSFLNST*HLVKST
Trigger: AGTAGATTTAACCAAGTGCCAGGTGGAATTCAAAAA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTGTTAAAGAGGCTACGTaGATCTGTCACTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISVKEAT*ICHCFS
Trigger: GCTAAAGCAGTGACAGATCCACGTAGCCTCTTTAAC...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACCTGTCCTCCATTGCTaGTACCACATAAGGGATACA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLPVLHC*YHIRDT
Trigger: TGTATCCCTTATGTGGTACCAGCAATGGAGGACAGG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CAA 72 bp CACTGTTTCTGGAAGACTACAGAAAATCTAACATGGTaGACACTTCCTGGTAGCCCTTCTGTACATACACAC +
Preference number: 4 (lower is better)
Translates to: HCFWKTTENLTW*TLPGSPSVHTH
Trigger: GTGTGTATGTACAGAAGGGCTACCAGGAAGTGTCAACCATGTTAGATTTTCTGTAGTCTTCCAGAAACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATCCTGACATCGAGCTCTaGGCAGAAACCGAGTATGTG +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHPDIEL*AETEYV
Trigger: CACATACTCGGTTTCTGCTCAGAGCTCGATGTCAGG...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATTTCAGAGCACATGGATaGTACCCAGGTCAGCACGGT +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHFRAHG*YPGQHG
Trigger: ACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAA...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGAATGACACAGGGCTATaGGGTACATACATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKNDTGL*GTYISF
Trigger: AAAAGAAATGTATGTACCTCATAGCCCTGTGTCATT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTATGTTTCTATCAAGCCTaGATGAGGTCAGCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLCFYQA*MRSALV
Trigger: TACCAGAGCTGACCTCATTCAGGCTTGATAGAAACA...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTATTTTACTGCACTGTTaGGATGTTCTCTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLILLHC*DVLCKV
Trigger: TACCTTGCAGAGAACATCTCAACAGTGCAGTAAAAT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTTATCCCTTGGACCACTaGTTAGTGACACATTTTCTC +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISYPLDH*LVTHFL
Trigger: GAGAAAATGTGTCACTAATCAGTGGTCCAAGGGATA...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATGGAAGACAAAGTCTTTaGAATGGAGGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHGRQSL*NGGWAG
Trigger: GCCAGCCCAGCCTCCATTTCAAAGACTTTGTCTTCC...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAAACAGAACTTTAGAATaGTCTAGGTCAGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSNRTLE*SRSGKE
Trigger: TTCTTTTCCTGACCTAGAGCATTCTAAAGTTCTGTT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTATCCTGTTGTATGGGCTaGACTGTTTCTGGAAGACTA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLSCCMG*TVSGRL
Trigger: TAGTCTTCCAGAAACAGTGCAGCCCATACAACAGGA...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTCATTTACAAAACTACTaGAAAACACTCCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISHLQNY*KTLPEG
Trigger: GCCCTCTGGGAGTGTTTTGCAGTAGTTTTGTAAATG...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATCTGAGCAGTATGAACTaGCCACCTCAACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHLSSMN*PPQLGS
Trigger: ACTGCCCAGTTGAGGTGGGCAGTTCATACTGCTCAG...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATACGTGGATCTGTCACTaGTTTAGCTTACCATTTTCA +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYTWICH*FSLPFS
Trigger: TGAAAATGGTAAGCTAAAGCAGTGACAGATCCACGT...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTACAGAAAATCTAACATaGTTGACACTTCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLTENLT*LTLPGS
Trigger: GCTACCAGGAAGTGTCAACCATGTTAGATTTTCTGT...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTATTTGATCCTTCCAGATaGCTCAGCCTAGATCTAGCA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLFDPSR*LSLDLA
Trigger: TGCTAGATCTAGGCTGAGCCATCTGGAAGGATCAAA...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATGCAACATCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHATSTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGATGTTGC...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTAGCCTCTACCTTCCCTaGCATAAGTCATATCTGTTA +
Preference number: 4 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISSLYLP*HKSYLL
Trigger: TAACAGATATGACTTATGCCAGGGAAGGTAGAGGCT...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTACTGATAGTAGATGAGTaGAGTGGAGGTAATCGTGAG +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLLIVDE*SGGNRE
Trigger: CTCACGATTACCTCCACTCCACTCATCTACTATCAG...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATGATTATCAACCAGTTTaGCAGTCTTCAGATCACAAA +
Preference number: 4 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYDYQPV*QSSDHK
Trigger: TTTGTGATCTGAAGACTGTCAAACTGGTTGATAATC...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAAATACACCCTTTCTTTaGTGCCCACCATGCCTTATT +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLNTPFL*CPPCLI
Trigger: AATAAGGCATGGTGGGCAGCAAAGAAAGGGTGTATT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTATCCCAAGAATATAACTaGTCTTTGGCTCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLSQEYN*SLALCV
Trigger: CACACACAGAGCCAAAGAGCAGTTATATTCTTGGGA...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAGTATCTTTTAGGGACTaGAGCCAATGTTCCCCAATT +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLVSFRD*SQCSPI
Trigger: AATTGGGGAACATTGGCTGCAGTCCCTAAAAGATAC...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAAGTGGGATATGGGGGTaGTCAAGTTTTACGGGTAAT +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKSGIWG*SSFTGN
Trigger: ATTACCCGTAAAACTTGACCACCCCCATATCCCACT...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAAACACAATTGGCAAATaGAGCCAGCACGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKNTIGK*SQHETV
Trigger: TACAGTTTCGTGCTGGCTTCATTTGCCAATTGTGTT...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAGTGAAGGATAACATGTaGAATGTACACTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLVKDNM*NVHSGL
Trigger: TAGACCTGAGTGTACATTTCACATGTTATCCTTCAC...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATACAGCCAAAATCATGTaGCTGCTAGCCTCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHTAKIM*LLASAQ
Trigger: TTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGT...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAATATCCTGGTGGGAGATaGGAGACCAATTTAATAGCT +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKYPGGR*ETNLIA
Trigger: AGCTATTAAATTGGTCTCCCATCTCCCACCAGGATA...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTATTTAATTTCACATCTTaGCTAAGGAGATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLFNFTS*LRRCHW
Trigger: CCAGTGGCATCTCCTTAGCCAAGATGTGAAATTAAA...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAATTCTGGGAGCAAATTaGATTTTTGAAGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: RLNNILGANWIFEGRVLLILGAN*IFEGRV
Trigger: GACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAAT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607016.2
3UTR CAA 72 bp TTTACAAATCCACTGCTATCTTCTTCTGTCCTGAGTTaGGTAGACTTTAATGGATGCTCCAGCAATAACCAG +
Preference number: 4 (lower is better)
Translates to: FTNPLLSSSVLS*VDFNGCSSNNQ
Trigger: CTGGTTATTGCTGGAGCATCCATTAAAGTCTACCAAACTCAGGACAGAAGAAGATAGCAGTGGATTTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR TCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATAAACATGGTCAAATGTaGAACCGCCCTTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHKHGQM*NRPFRG
Trigger: GCCTCTAAAAGGGCGGTTTCACATTTGACCATGTTT...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAACTGGCAAAACGACAATaGTGCTGTTTTTGTATCCTT +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKLAKRQ*CCFCIL
Trigger: AAGGATACAAAAACAGCAGCATTGTCGTTTTGCCAG...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR GCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAAGTAGACTTTAATGGATaGTCCAGCAATAACCAGAAT +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKVDFNG*SSNNQN
Trigger: ATTCTGGTTATTGCTGGAGCATCCATTAAAGTCTAC...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATAATGGGACCTCTCCTTaGGAATATAATTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHNGTSP*EYNSFP
Trigger: GGGAAAGGAATTATATTCCCAAGGAGAGGTCCCATT...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATTCTACAGTCAATGACTaGGAAATAGAGAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHSTVND*EIEKGQ
Trigger: CTGTCCTTTCTCTATTTCCCAGTCATTGACTGTAGA...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAACACAGGCAATATTACTaGCAAAATGATTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKHRQYY*QNDFPK
Trigger: CTTTGGAAAATCATTTTGCCAGTAATATTGCCTGTG...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CCA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAATGTCATTGGATAGGATaGAAGACAAAGTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKCHWIG*KTKSLK
Trigger: TTTCAAAGACTTTGTCTTCCATCCTATCCAATGACA...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS CCA 90 bp AGGGAAGCAGGGAGGGGGAGCTTCTCCGCTACACGGCTCCGCCGCTaGCCCGCCGCGGCCGCCTCATTCCCCCAGGCCCAGGTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: REAGRGSFSATRLRR*PAAAASFPQAQVPR
Trigger: GCGCGGGACCTGGGCCTGGGGGAATGAGGCGGCCGCGGCGGGCCAGCGGCGGAGCCGTGTAGCGGAGAAGCTCCCCCTCCCTGCTTCCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAGACCGCGCCGCCATCTaGGGCGCGATGCGTCAGCGG +
Preference number: 5 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSDRAAI*GAMRQR
Trigger: CCGCTGACGCATCGCGCCCAAGATGGCGGCGCGGTC...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS TCA 90 bp CTCTTACAGGAAGTCTTCAGTCATCTGATGCCTGACATCGAGCTCTaGGCAGAAACCGAGTATGTGGTGGCCACGACTGGGGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: LLQEVFSHLMPDIEL*AETEYVVATTGVPL
Trigger: CAATGGCACCCCAGTCGTGGCCACCACATACTCGGTTTCTGCTCAGAGCTCGATGTCAGGCATCAGATGACTGAAGACTTCCTGTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCAAGGGTGCTCTCCCACTaGCTCCAAGTTAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSRVLSH*LQVRQV
Trigger: CACCTGCCTAACTTGGAGCAAGTGGGAGAGCACCCT...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS GCA 90 bp TCGAGCTCTGAGCAGAAACCGAGTATGTGGTGGCCACGACTGGGGTaGCATTGTTGGCTGAGTAGCCTTGCCTCAATGTTTCAAAATATG +
Preference number: 5 (lower is better)
Translates to: SSSEQKPSMWWPRLG*HCWLSSLASMFQNM
Trigger: CATATTTTGAAACATTGAGGCAAGGCTACTCAGCCAACAATGGCACCCCAGTCGTGGCCACCACATACTCGGTTTCTGCTCAGAGCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS CCA 90 bp GAGCAGAAACCGAGTATGTGGTGGCCACGACTGGGGTGCCATTGTTaGCTGAGTAGCCTTGCCTCAATGTTTCAAAATATGATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: EQKPSMWWPRLGCHC*LSSLASMFQNMMPA
Trigger: TGCAGGCATCATATTTTGAAACATTGAGGCAAGGCTACTCAGCCAACAATGGCACCCCAGTCGTGGCCACCACATACTCGGTTTCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTGGCAGGGGAAGGCTGTaGGCCTCTCTTCAGAGGACT +
Preference number: 5 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLGRGRL*ASLQRT
Trigger: AGTCCTCTGAAGAGAGGCCAACAGCCTTCCCCTGCC...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTCGGGTCTGGTTCGACTaGAGCTTCATCATCCTCCGG +
Preference number: 5 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLRVWFD*SFIILR
Trigger: CCGGAGGATGATGAAGCTCAAGTCGAACCAGACCCG...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS TCA 90 bp CCAATTTCCATTTCTCTTACAGGAAGTCTTCAGTCATCTGATGCCTaGCATCGAGCTCTGAGCAGAAACCGAGTATGTGGTGGCCACGAC +
Preference number: 5 (lower is better)
Translates to: PISISLTGSLQSSDA*HRALSRNRVCGGHD
Trigger: GTCGTGGCCACCACATACTCGGTTTCTGCTCAGAGCTCGATGTCAGGCATCAGATGACTGAAGACTTCCTGTAAGAGAAATGGAAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGGAGGACACAAGCCTCTaGCTCATTAAGCAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKEDTSL*LIKQRP
Trigger: GGGCCTTTGCTTAATGAGCAAGAGGCTTGTGTCCTC...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACACCTGCAAAGTAAAGTaGGATGCTTCAGAGCACATG +
Preference number: 5 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDTCKVK*DASEHM
Trigger: CATGTGCTCTGAAGCATCCAACTTTACTTTGCAGGT...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACAGGGACAGGACTACATaGATGCACCTGCAAAGTAAA +
Preference number: 5 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDRDRTT*MHLQSK
Trigger: TTTACTTTGCAGGTGCATCAATGTAGTCCTGTCCCT...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCATCAAGTCCCATGGTATaGTTCTTATCCAATGGGACC +
Preference number: 5 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSSSPMV*FLSNGT
Trigger: GGTCCCATTGGATAAGAACAATACCATGGGACTTGA...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGTCTTCTGTCCTGAGTTaGGTAGACTTTAATGGATGC +
Preference number: 5 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWSSVLS*VDFNGC
Trigger: GCATCCATTAAAGTCTACCAAACTCAGGACAGAAGA...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp TATCCTGGAAGCCTCTGTAGCCTTGAGGAGATAGGCTCTATCCAACAGGACTCAGAAAATCTAACATGGTaGACACTTCCTGGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: YPGSLCSLEEIGSIQQDSENLTW*TLPGSP
Trigger: AGGGCTACCAGGAAGTGTCAACCATGTTAGATTTTC...TGAGTCCTGTTGGATAGAGCCTATCTCCTCAAGGCTACAGAGGCTTCCAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp CCCAGGTCAGCACGGTGTAAGGCATATATGGACACAAAGAGAGGCCATTGTTGGGAATATAACTGCTCTTaGGCTCTGTGTGTGAAGATT +
Preference number: 5 (lower is better)
Translates to: PRSARCKAYMDTKRGHCWEYNCS*ALCVKI
Trigger: AATCTTCACACACAGAGCCAAAGAGCAGTTATATTC...CCAACAATGGCCTCTCTTTGTGTCCATATATGCCTTACACCGTGCTGACCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp GACAGCCAAAATCATGTGACTGCTAGCCTCAGCTCAAGTAGTGTGCCCAAATCATCCCTGACCATGTCATaGGATAGGATGGAAGACAAA +
Preference number: 5 (lower is better)
Translates to: DSQNHVTASLSSSSVPKSSLTMS*DRMEDK
Trigger: TTTGTCTTCCATCCTATCCAATGACATGGTCAGGGA...TGATTTGGGCACACTACTTGAGCTGAGGCTAGCAGTCACATGATTTTGGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS TCA 90 bp CTAGTTTCCAATTTCCATTTCTCTTACAGGAAGTCTTCAGTCATCTaGTGCCTGACATCGAGCTCTGAGCAGAAACCGAGTATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LVSNFHFSYRKSSVI*CLTSSSEQKPSMWW
Trigger: CCACCACATACTCGGTTTCTGCTCAGAGCTCGATGTCAGGCATCAGATGACTGAAGACTTCCTGTAAGAGAAATGGAAATTGGAAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTGGTGAGAGGGAAGATTaGCACTTCAGTCTAGTTTCC +
Preference number: 5 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLGERED*HFSLVS
Trigger: GGAAACTAGACTGAAGTGCAAATCTTCCCTCTCACC...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp CAGAAAGACAGGCTCAGATCAGGACGACTTCTTAAAGGGATTCACAGGCAATATCAATACACCCTTTCTTaGCTGCCCACCATGCCTTAT +
Preference number: 5 (lower is better)
Translates to: QKDRLRSGRLLKGIHRQYQYTLS*LPTMPY
Trigger: ATAAGGCATGGTGGGCAGCAAAGAAAGGGTGTATTG...ATATTGCCTGTGAATCCCTTTAAGAAGTCGTCCTGATCTGAGCCTGTCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp CTTCAGAGCACATGGATGATACCCAGGTCAGCACGGTGTAAGGCATATATGGACTATTTTACTGCACTGTaGAGATGTTCTCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: LQSTWMIPRSARCKAYMDYFTAL*RCSLQG
Trigger: ACCTTGCAGAGAACATCTCAACAGTGCAGTAAAATA...GTCCATATATGCCTTACACCGTGCTGACCTGGGTATCATCCATGTGCTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp AGGCTAAACAACATTCTGGGAGCAAATTGGATTTTTGAAGGGAGAGTCCTCTTAAACTCCCTCATGTTCTaGGGAGGACACAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: RLNNILGANWIFEGRVLLNSLMF*GGHKPL
Trigger: AAGAGGCTTGTGTCCTCCCAAGAACATGAGGGAGTT...TAAGAGGACTCTCCCTTCAAAAATCCAATTTGCTCCCAGAATGTTGTTTAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGAAAGAGAGGCCATTGTaGGCAATAAATAGCATTACG +
Preference number: 5 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKKERPL*AINSIT
Trigger: CGTAATGCTATTTATTGCCAACAATGGCCTCTCTTT...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTTGTGTGAATAGTAAGTaGGCATTCAGACTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLCVNSK*AFRLKS
Trigger: GGACTTGAGTCTGAATGCCAACTTACTATTCACACA...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp GGACCTCTCCTTGGGAATATAATTCCTTTCCCAGAGGTATCATGGTATCCCAAGCCACCAACCTTTTCTTaGATTATCAACCAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: GPLLGNIIPFPEVSWYPKPPTFS*IINQFD
Trigger: GTCAAACTGGTTGATAATCAAAGAAAAGGTTGGTGG...CTTGGGATACCATGATACCTCTGGGAAAGGAATTATATTCCCAAGGAGAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp TTTTCAATTCAGCACCAAAGTGCTCAGAAAGACAGGCTCAGATCAGGACGACTTCAACCTGAAATATTCTaGACTTCCTTAAGCACATGG +
Preference number: 5 (lower is better)
Translates to: FSIQHQSAQKDRLRSGRLQPEIF*TSLSTW
Trigger: CCATGTGCTTAAGGAAGTCAAGAATATTTCAGGTTG...AAGTCGTCCTGATCTGAGCCTGTCTTTCTGAGCACTTTGGTGCTGAATTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp CCAAGAATCCAGTTCCAACTCTACTGTCAACATGTGGGGCAGAATTCAATTTCTAAATTAAGATTCCTGTaGTATGGGCTGCACTGTTTC +
Preference number: 5 (lower is better)
Translates to: PRIQFQLYCQHVGQNSISKLRFL*YGLHCF
Trigger: GAAACAGTGCAGCCCATACAACAGGAATCTTAATTT...AGAAATTGAATTCTGCCCCACATGTTGACAGTAGAGTTGGAACTGGATTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp CTAACTAATCTATCACTAAAGGACTGTGACGACATTCTCAATAAAGACAGTCATTCTTATGGCCCAGCATaGGCATTGAGGCATCTTGCT +
Preference number: 5 (lower is better)
Translates to: LTNLSLKDCDDILNKDSHSYGPA*ALRHLA
Trigger: AGCAAGATGCCTCAATGCCAATGCTGGGCCATAAGA...ATGACTGTCTTTATTGAGAATGTCGTCACAGTCCTTTAGTGATAGATTAGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS-3UTR CAA 90 bp AACCTGTTTCTATCAAGCCTGAATGAGGTCAGCTCTGGTAGAATTAATGACAAATTTTACTTCAGCACTTaGGAAACTCTCCAAGACTTA +
Preference number: 5 (lower is better)
Translates to: NLFLSSLNEVSSGRINDKFYFST*ETLQDL
Trigger: TAAGTCTTGGAGAGTTTCCAAAGTGCTGAAGTAAAA...TTTGTCATTAATTCTACCAGAGCTGACCTCATTCAGGCTTGATAGAAACAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS GCA 72 bp GCCTCATTCCCCCAGGCCCAGGTCCCGCGCCGCCGCTaGCACCGTCACGGCTGCCGTCTCCGCTGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: ASFPQAQVPRRR*HRHGCRLRCRQ
Trigger: CTGGCGGCAGCGGAGACGGCAGCCGTGACGGTGGCAGCGGCGGCGCGGGACCTGGGCCTGGGGGAATGAGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS CCA 72 bp GGGAGGGGGAGCTTCTCCGCTACACGGCTCCGCCGCTaGCCCGCCGCGGCCGCCTCATTCCCCCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GRGSFSATRLRR*PAAAASFPQAQ
Trigger: CTGGGCCTGGGGGAATGAGGCGGCCGCGGCGGGCCAGCGGCGGAGCCGTGTAGCGGAGAAGCTCCCCCTCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS TCA 72 bp AGCCGTCGCCGTCGTAGGTGCGGGTCTGGTTCGACTTaGGCTTCATCATCCTCCGGGCCCGGGTGGGGGTGC +
Preference number: 6 (lower is better)
Translates to: SRRRRRCGSGST*ASSSSGPGWGC
Trigger: GCACCCCCACCCGGGCCCGGAGGATGATGAAGCTCAAGTCGAACCAGACCCGCACCTACGACGGCGACGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS CCA 72 bp CTGACATCGAGCTCTGAGCAGAAACCGAGTATGTGGTaGCCACGACTGGGGTGCCATTGTTGGCTGAGTAGC +
Preference number: 6 (lower is better)
Translates to: LTSSSEQKPSMW*PRLGCHCWLSS
Trigger: GCTACTCAGCCAACAATGGCACCCCAGTCGTGGCCACCACATACTCGGTTTCTGCTCAGAGCTCGATGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS CCA 72 bp TGCCTGACATCGAGCTCTGAGCAGAAACCGAGTATGTaGTGGCCACGACTGGGGTGCCATTGTTGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: CLTSSSEQKPSM*WPRLGCHCWLS
Trigger: ACTCAGCCAACAATGGCACCCCAGTCGTGGCCACCACATACTCGGTTTCTGCTCAGAGCTCGATGTCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS GCA 72 bp GAGCAGAAACCGAGTATGTGGTGGCCACGACTGGGGTaGCATTGTTGGCTGAGTAGCCTTGCCTCAATGTTT +
Preference number: 6 (lower is better)
Translates to: EQKPSMWWPRLG*HCWLSSLASMF
Trigger: AAACATTGAGGCAAGGCTACTCAGCCAACAATGGCACCCCAGTCGTGGCCACCACATACTCGGTTTCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS TCA 72 bp ATTTCTCTTACAGGAAGTCTTCAGTCATCTGATGCCTaGCATCGAGCTCTGAGCAGAAACCGAGTATGTGGT +
Preference number: 6 (lower is better)
Translates to: ISLTGSLQSSDA*HRALSRNRVCG
Trigger: ACCACATACTCGGTTTCTGCTCAGAGCTCGATGTCAGGCATCAGATGACTGAAGACTTCCTGTAAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2
CDS TCA 72 bp AATTTCCATTTCTCTTACAGGAAGTCTTCAGTCATCTaGTGCCTGACATCGAGCTCTGAGCAGAAACCGAGT +
Preference number: 6 (lower is better)
Translates to: NFHFSYRKSSVI*CLTSSSEQKPS
Trigger: ACTCGGTTTCTGCTCAGAGCTCGATGTCAGGCATCAGATGACTGAAGACTTCCTGTAAGAGAAATGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607016.2