Pregenerated sensors for NUDT19-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267475Ensembl transcript IDs: ENST00000592431.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCCTGCGTGGGAATACTGCGGTCCTCCTTTCAGGCAGCTGTGAATaGCAAACGGTCGCTGGCTGCCGTGACACCCATTGTCCCGCGAGA | + |
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Preference number: 5 (lower is better) Translates to: FLRGNTAVLLSGSCE*QTVAGCRDTHCPAR Trigger: TCTCGCGGGACAATGGGTGTCACGGCAGCCAGCGACCGTTTGTCATTCACAGCTGCCTGAAAGGAGGACCGCAGTATTCCCACGCAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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| CDS CCA 90 bp | TTTTTACCATGGCAAGTCATATGCGCCCTTAAGCATTCCTGCTTTTaGTCCAAGCTTCCTGCGTGGGAATACTGCGGTCCTCCTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: FLPWQVICALKHSCF*SKLPAWEYCGPPFR Trigger: CCTGAAAGGAGGACCGCAGTATTCCCACGCAGGAAGCTTGGACCAAAAGCAGGAATGCTTAAGGGCGCATATGACTTGCCATGGTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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| CDS CCA 90 bp | ATTTATAAATTGGCATCTGGCTCGTCCATTCATTTCTCATTGGTGTaGTTCACGTGTGCTTGCAAAGGTCAGACTTCTGCCCTTCGAATG | + |
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Preference number: 5 (lower is better) Translates to: IYKLASGSSIHFSLV*FTCACKGQTSALRM Trigger: CATTCGAAGGGCAGAAGTCTGACCTTTGCAAGCACACGTGAACCACACCAATGAGAAATGAATGGACGAGCCAGATGCCAATTTATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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| CDS CCA 90 bp | AGGAAATTTATAAATTGGCATCTGGCTCGTCCATTCATTTCTCATTaGTGTGGTTCACGTGTGCTTGCAAAGGTCAGACTTCTGCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: RKFINWHLARPFISH*CGSRVLAKVRLLPF Trigger: GAAGGGCAGAAGTCTGACCTTTGCAAGCACACGTGAACCACACCAATGAGAAATGAATGGACGAGCCAGATGCCAATTTATAAATTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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| CDS TCA 72 bp | GGGAATACTGCGGTCCTCCTTTCAGGCAGCTGTGAATaGCAAACGGTCGCTGGCTGCCGTGACACCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: GNTAVLLSGSCE*QTVAGCRDTHC Trigger: ACAATGGGTGTCACGGCAGCCAGCGACCGTTTGTCATTCACAGCTGCCTGAAAGGAGGACCGCAGTATTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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| CDS CCA 72 bp | TGGCAAGTCATATGCGCCCTTAAGCATTCCTGCTTTTaGTCCAAGCTTCCTGCGTGGGAATACTGCGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: WQVICALKHSCF*SKLPAWEYCGP Trigger: AGGACCGCAGTATTCCCACGCAGGAAGCTTGGACCAAAAGCAGGAATGCTTAAGGGCGCATATGACTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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| CDS GCA 72 bp | TTACCATGGCAAGTCATATGCGCCCTTAAGCATTCCTaGTTTTGGTCCAAGCTTCCTGCGTGGGAATACTGC | + |
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Preference number: 6 (lower is better) Translates to: LPWQVICALKHS*FWSKLPAWEYC Trigger: GCAGTATTCCCACGCAGGAAGCTTGGACCAAAAGCAGGAATGCTTAAGGGCGCATATGACTTGCCATGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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| CDS GCA 72 bp | TTCCTTTCTAACGAAGAGCAGCCTGTAAAATCCAGCTaGAGACATAGATCCGACAGTTGTGCCACTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FLSNEEQPVKSS*RHRSDSCATPV Trigger: AACAGGAGTGGCACAACTGTCGGATCTATGTCTGCAGCTGGATTTTACAGGCTGCTCTTCGTTAGAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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| CDS CAA 72 bp | TATAAATTGGCATCTGGCTCGTCCATTCATTTCTCATaGGTGTGGTTCACGTGTGCTTGCAAAGGTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: YKLASGSSIHFS*VWFTCACKGQT Trigger: AGTCTGACCTTTGCAAGCACACGTGAACCACACCAATGAGAAATGAATGGACGAGCCAGATGCCAATTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592431.1 |
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