RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT13 (Homo sapiens)

Ensembl gene IDs: ENSG00000166321

Ensembl transcript IDs: ENST00000349051.9, ENST00000357321.9, ENST00000372997.3, ENST00000469925.1, ENST00000488223.5, ENST00000537969.5, ENST00000544879.5, ENST00000617744.4

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTaGTCTGCCCTTCTGAGGTCCTTCTGCAGCTTATCTTTTGTCACT +
Preference number: 1 (lower is better)
Translates to: PLTLLIEVSYCRLTL*SALLRSFCSLSFVT
Trigger: AGTGACAAAAGATAAGCTGCAGAAGGACCTCAGAAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR TCA 90 bp GAGGTCCTTCTGCAGCTTATCTTTTGTCACTTCTCCTTTGTCAACTaGTCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGT +
Preference number: 1 (lower is better)
Translates to: EVLLQLIFCHFSFVN*SLVCPSGIPRSDLS
Trigger: ACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAGTGACAAAAGATAAGCTGCAGAAGGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR CCA 90 bp GGCATCTGTTTATCTCCACCAATCCCTTTGTTAATCAACACGTTGTaGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAGGCA +
Preference number: 1 (lower is better)
Translates to: GICLSPPIPLLINTL*MCKCQQLFYLGKQA
Trigger: TGCCTGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAACAAAGGGATTGGTGGAGATAAACAGATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR GCA 90 bp TGTTTATCTCCACCAATCCCTTTGTTAATCAACACGTTGTGGATGTaGAAATGCCAGCAACTGTTTTATTTAGGAAAACAGGCATGGCAA +
Preference number: 1 (lower is better)
Translates to: CLSPPIPLLINTLWM*KCQQLFYLGKQAWQ
Trigger: TTGCCATGCCTGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAACAAAGGGATTGGTGGAGATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR GCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGGCTCACCCTTTGCTCTaGCCTTCTGAGGTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELAHPLL*PSEVLL
Trigger: CAGAAGGACCTCAGAAGGGCAGAGCAAAGGGTGAGC...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAAGTGGCTACCTCATCATaGCTGAACCAGGCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKVATSS*LNQAAV
Trigger: GACAGCTGCCTGGTTCAGTCATGATGAGGTAGCCAC...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR-3UTR GCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAAGCTCACCCTTTGCTCTaGCCTTCTGAGGTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKAHPLL*PSEVLL
Trigger: CAGAAGGACCTCAGAAGGGCAGAGCAAAGGGTGAGC...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGAGGGGGCAGCCAGAATaGGAAAGTCCCATTCTGTTG +
Preference number: 2 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTERGQPE*ESPILL
Trigger: CAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCT...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR CAA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTaGATCCGGGCTAAGCAGGCAGGGAAGAACAGGTCTGTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: SLVCPSGIPRSDLSD*IRAKQAGKNRSVFP
Trigger: TGGAAAAACAGACCTGTTCTTCCCTGCCTGCTTAGCCCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR-3UTR GCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGTGTAGGCTCACCCTTTaGTCTGCCCTTCTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQCRLTL*SALLRS
Trigger: GGACCTCAGAAGGGCAGAGCAAAGGGTGAGCCTACA...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR GCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATGTAGGCTCACCCTTTaGTCTGCCCTTCTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: SPIGILLPQQSLRASDLLCRLTL*SALLRS
Trigger: GGACCTCAGAAGGGCAGAGCAAAGGGTGAGCCTACA...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGGATTTCTGTCTGCCCTaGTTTCACAGTTGCATGGCA +
Preference number: 2 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELDFCLP*FHSCMA
Trigger: TGCCATGCAACTGTGAAACCAGGGCAGACAGAAATC...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR-3UTR TCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACACCCTGGGTCACAAACTaGGCATGTGACAGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTPWVTN*ACDRAE
Trigger: TTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGG...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCTTCCCCCTGATTTTTaGCAGTTGACAGCTCATCAG +
Preference number: 2 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQLPPDF*QLTAHQ
Trigger: CTGATGAGCTGTCAACTGTCAAAAATCAGGGGGAAG...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGCTTAGAGAAAATGACTaGACAAGGGCCTACATCCAA +
Preference number: 2 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELLREND*TRAYIQ
Trigger: TTGGATGTAGGCCCTTGTTCAGTCATTTTCTCTAAG...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTTAGAGAAAATGACTaGACAAGGGCCTACATCCAA +
Preference number: 2 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTELREND*TRAYIQ
Trigger: TTGGATGTAGGCCCTTGTTCAGTCATTTTCTCTAAG...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAATGTCTGGAGTCCCATTaGGATTCTACTTCCTCAACA +
Preference number: 2 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKCLESH*DSTSST
Trigger: TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACA...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAATTCTCCTTTGTCAACTaGTCTCTAGTTTGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKFSFVN*SLVCPS
Trigger: TGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAA...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGTTCTCCTTTGTCAACTaGTCTCTAGTTTGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQFSFVN*SLVCPS
Trigger: TGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAA...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGGAGCCTCAGGGCATCTaGTTTATTATAAAGTACTCT +
Preference number: 2 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTEEPQGI*FIIKYS
Trigger: AGAGTACTTTATAATAAATCAGATGCCCTGAGGCTC...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGGAGCCTCAGGGCATCTaGTTTATTATAAAGTACTCT +
Preference number: 2 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELEPQGI*FIIKYS
Trigger: AGAGTACTTTATAATAAATCAGATGCCCTGAGGCTC...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTCCCTGGGTCACAAACTaGGCATGTGACAGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCPWVTN*ACDRAE
Trigger: TTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGG...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR GCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACATGTAGGCTCACCCTTTaGTCTGCCCTTCTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTCRLTL*SALLRS
Trigger: GGACCTCAGAAGGGCAGAGCAAAGGGTGAGCCTACA...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATGTCTGGAGTCCCATTaGGATTCTACTTCCTCAACA +
Preference number: 2 (lower is better)
Translates to: SPIGILLPQQSLRASDLLCLESH*DSTSST
Trigger: TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACA...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR GCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCTTCTGAGGTCCTTCTaGAGCTTATCTTTTGTCACT +
Preference number: 2 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQLLRSF*SLSFVT
Trigger: AGTGACAAAAGATAAGCTGCAGAAGGACCTCAGAAG...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGAAAAGATTTACTGTCTaGAGTCCCATTGGGATTCTA +
Preference number: 2 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTEKRFTV*SPIGIL
Trigger: TAGAATCCCAATGGGACTCCAGACAGTAAATCTTTT...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACATCCTTAATCAGTTGGTaGGAGATGGCTAACTTAGGG +
Preference number: 2 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTSLISW*EMANLG
Trigger: CCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGA...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR-3UTR TCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACCCTGGGTCACAAACTaGGCATGTGACAGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKPWVTN*ACDRAE
Trigger: TTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGG...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR GCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAAACACGTTGTGGATGTaGAAATGCCAGCAACTGTTT +
Preference number: 2 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTNTLWM*KCQQLF
Trigger: AAACAGTTGCTGGCATTTGCACATCCACAACGTGTT...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACATTAATCAACACGTTGTaGATGTGCAAATGCCAGCAA +
Preference number: 2 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTLINTL*MCKCQQ
Trigger: TTGCTGGCATTTGCACATCCACAACGTGTTGATTAA...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTCACTCCTTAATCAGTTaGTGGGAGATGGCTAACTTA +
Preference number: 2 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCHSLIS*WEMANL
Trigger: TAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTG...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR CAA 90 bp TTTGGCATCTGTTTATCTCCACCAATCCCTTTGTTAATCAACACGTaGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAG +
Preference number: 2 (lower is better)
Translates to: FGICLSPPIPLLINT*WMCKCQQLFYLGKQ
Trigger: CTGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAACAAAGGGATTGGTGGAGATAAACAGATGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACATTCTCCTTTGTCAACTaGTCTCTAGTTTGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTFSFVN*SLVCPS
Trigger: TGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAA...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACACTTAGAGAAAATGACTaGACAAGGGCCTACATCCAA +
Preference number: 2 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTLREND*TRAYIQ
Trigger: TTGGATGTAGGCCCTTGTTCAGTCATTTTCTCTAAG...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR GCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACACTTCTGAGGTCCTTCTaGAGCTTATCTTTTGTCACT +
Preference number: 2 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTLLRSF*SLSFVT
Trigger: AGTGACAAAAGATAAGCTGCAGAAGGACCTCAGAAG...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAATGTCTGGAGTCCCATTaGGATTCTACTTCCTCAACA +
Preference number: 2 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKCLESH*DSTSST
Trigger: TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACA...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAATTCTCCTTTGTCAACTaGTCTCTAGTTTGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKFSFVN*SLVCPS
Trigger: TGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAA...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAGAGCCTCAGGGCATCTaGTTTATTATAAAGTACTCT +
Preference number: 2 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTEPQGI*FIIKYS
Trigger: AGAGTACTTTATAATAAATCAGATGCCCTGAGGCTC...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR GCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACTTCTGAGGTCCTTCTaGAGCTTATCTTTTGTCACT +
Preference number: 2 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKLLRSF*SLSFVT
Trigger: AGTGACAAAAGATAAGCTGCAGAAGGACCTCAGAAG...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTTTAGGAAAACAGGCATaGCAAAGCAATAGTCTTTTC +
Preference number: 2 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCLGKQA*QSNSLF
Trigger: GAAAAGACTATTGCTTTGCCATGCCTGTTTTCCTAA...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACATTAATCAACACGTTGTaGATGTGCAAATGCCAGCAA +
Preference number: 2 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTLINTL*MCKCQQ
Trigger: TTGCTGGCATTTGCACATCCACAACGTGTTGATTAA...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAAGAAATAGGTCAGGTTTaGCATCTGTTTATCTCCACC +
Preference number: 2 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKEIGQV*HLFIST
Trigger: GGTGGAGATAAACAGATGCCAAACCTGACCTATTTC...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR TCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAAGAGCCTCAGGGCATCTaGTTTATTATAAAGTACTCT +
Preference number: 2 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKEPQGI*FIIKYS
Trigger: AGAGTACTTTATAATAAATCAGATGCCCTGAGGCTC...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAAAAAGATTTACTGTCTaGAGTCCCATTGGGATTCTA +
Preference number: 2 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTKRFTV*SPIGIL
Trigger: TAGAATCCCAATGGGACTCCAGACAGTAAATCTTTT...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AGTGACTTGATCCGGGCTAAGCAGGCAGGGAAGAACAGGTCTGTTTTTCCACCCCAACTGATCTCTAGTTaGTCCCTCAGGAATACCAAG +
Preference number: 3 (lower is better)
Translates to: SDLIRAKQAGKNRSVFPPQLISS*SLRNTK
Trigger: CTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTG...GGGTGGAAAAACAGACCTGTTCTTCCCTGCCTGCTTAGCCCGGATCAAGTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR GCA 72 bp CTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTaGTCTGCCCTTCTGAGGTCCTTCTGCAGCTTATCT +
Preference number: 3 (lower is better)
Translates to: LLIEVSYCRLTL*SALLRSFCSLS
Trigger: AGATAAGCTGCAGAAGGACCTCAGAAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR GCA 72 bp AGGCTCACCCTTTGCTCTGCCCTTCTGAGGTCCTTCTaGAGCTTATCTTTTGTCACTTCTCCTTTGTCAACT +
Preference number: 3 (lower is better)
Translates to: RLTLCSALLRSF*SLSFVTSPLST
Trigger: AGTTGACAAAGGAGAAGTGACAAAAGATAAGCTGCAGAAGGACCTCAGAAGGGCAGAGCAAAGGGTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGCTGTCTGGAGTCCCATaGGGATTCTACTTCCTCAAC +
Preference number: 3 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQLSGVP*GFYFLN
Trigger: GTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAG...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGCAACTGATCTCTAGTTaGTCCCTCAGGAATACCAAG +
Preference number: 3 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQQLISS*SLRNTK
Trigger: CTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTG...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAACAACTGATCTCTAGTTaGTCCCTCAGGAATACCAAG +
Preference number: 3 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKQLISS*SLRNTK
Trigger: CTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTG...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACACTGTCTGGAGTCCCATaGGGATTCTACTTCCTCAAC +
Preference number: 3 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTLSGVP*GFYFLN
Trigger: GTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAG...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGTTGTTAATCAACACGTaGTGGATGTGCAAATGCCAG +
Preference number: 3 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELLLINT*WMCKCQ
Trigger: CTGGCATTTGCACATCCACAACGTGTTGATTAACAA...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAGAAATAGGTCAGGTTaGGCATCTGTTTATCTCCAC +
Preference number: 3 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELRNRSG*ASVYLH
Trigger: GTGGAGATAAACAGATGCCAAACCTGACCTATTTCT...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR TCA 72 bp GAAGATGTTTGCTTCCAAGGCCTTAGAGAAAATGACTaGACAAGGGCCTACATCCAAACTAATGCTTCCCCC +
Preference number: 3 (lower is better)
Translates to: EDVCFQGLREND*TRAYIQTNASP
Trigger: GGGGGAAGCATTAGTTTGGATGTAGGCCCTTGTTCAGTCATTTTCTCTAAGGCCTTGGAAGCAAACATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR CCA 72 bp AAAACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTaGGATTCTACTTCCTCAACAGAGCCTCAGGGCATC +
Preference number: 3 (lower is better)
Translates to: KTAKKIYCLESH*DSTSSTEPQGI
Trigger: GATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATCTCCACCAATCCCTTaGTTAATCAACACGTTGTGG +
Preference number: 3 (lower is better)
Translates to: SPIGILLPQQSLRASDLLSPPIP*LINTLW
Trigger: CCACAACGTGTTGATTAACAAAGGGATTGGTGGAGA...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGAGAAATAGGTCAGGTTaGGCATCTGTTTATCTCCAC +
Preference number: 3 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQRNRSG*ASVYLH
Trigger: GTGGAGATAAACAGATGCCAAACCTGACCTATTTCT...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTAGCGATCTAAGTGACTaGATCCGGGCTAAGCAGGCA +
Preference number: 3 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCSDLSD*IRAKQA
Trigger: TGCCTGCTTAGCCCGGATCAAGTCACTTAGATCGCT...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR-3UTR CAA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAATACAACAGGCACATTTaGGCAGTTAGTGTAAACACA +
Preference number: 3 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKYNRHI*AVSVNT
Trigger: TGTGTTTACACTAACTGCCAAAATGTGCCTGTTGTA...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATTGTTAATCAACACGTaGTGGATGTGCAAATGCCAG +
Preference number: 3 (lower is better)
Translates to: SPIGILLPQQSLRASDLLLLINT*WMCKCQ
Trigger: CTGGCATTTGCACATCCACAACGTGTTGATTAACAA...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACACTGTCTGGAGTCCCATaGGGATTCTACTTCCTCAAC +
Preference number: 3 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTLSGVP*GFYFLN
Trigger: GTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAG...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACATCTCCACCAATCCCTTaGTTAATCAACACGTTGTGG +
Preference number: 3 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTSPPIP*LINTLW
Trigger: CCACAACGTGTTGATTAACAAAGGGATTGGTGGAGA...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAACTGATCTCTAGTTaGTCCCTCAGGAATACCAAG +
Preference number: 3 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKQLISS*SLRNTK
Trigger: CTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTG...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAATCTCCACCAATCCCTTaGTTAATCAACACGTTGTGG +
Preference number: 3 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKSPPIP*LINTLW
Trigger: CCACAACGTGTTGATTAACAAAGGGATTGGTGGAGA...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR CCA 72 bp TTATCTCCACCAATCCCTTTGTTAATCAACACGTTGTaGATGTGCAAATGCCAGCAACTGTTTTATTTAGGA +
Preference number: 3 (lower is better)
Translates to: LSPPIPLLINTL*MCKCQQLFYLG
Trigger: TCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAACAAAGGGATTGGTGGAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR-3UTR CAA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAATTGTTAATCAACACGTaGTGGATGTGCAAATGCCAG +
Preference number: 3 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKLLINT*WMCKCQ
Trigger: CTGGCATTTGCACATCCACAACGTGTTGATTAACAA...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CCAAGGAGCGATCTAAGTGACTTGATCCGGGCTAAGCAGGCAGGGAAGAACAGGAAGGGCACACACGCTTaGTGCCAGCCACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PRSDLSDLIRAKQAGKNRKGTHA*CQPRSS
Trigger: AGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTT...CCTGTTCTTCCCTGCCTGCTTAGCCCGGATCAAGTCACTTAGATCGCTCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR CCA 90 bp TGGGAGATGGCTAACTTAGGGGGCAGCCAGAATGGGAAAGTCCCATTCTGTTGCCAGCCACGTTCTTCTTaGTGGGCTGCCCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: WEMANLGGSQNGKVPFCCQPRSS*WAAHFC
Trigger: GCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTG...GCAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCTAAGTTAGCCATCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR TCA 90 bp TGGGAGATGGCTAACTTAGGGGGCAGCCAGAATGGGAAAGTCCCATTCTGTTGCGCAAGCAATCATGAGTaGGCCACTAGGGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WEMANLGGSQNGKVPFCCASNHE*ATREGP
Trigger: TGGCCCTTCCCTAGTGGCTCACTCATGATTGCTTGC...GCAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCTAAGTTAGCCATCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR CCA 90 bp CATTCTGTTGCTGAGTATAGGGGCCCTTTCTCTTCAGGGCTGTGGCTACCTCATGAAGAGCTTGAGCCGTaGACAGCAAGGAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: HSVAEYRGPFSSGLWLPHEELEP*TARRHP
Trigger: GGGATGCCTCCTTGCTGTCCACGGCTCAAGCTCTTC...ATGAGGTAGCCACAGCCCTGAAGAGAAAGGGCCCCTATACTCAGCAACAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR TCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAGCATCGGGTCCCATCTaGCACCAGCGTGATCGCCAC +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERASGPI*HQRDRH
Trigger: GTGGCGATCACGCTGGTGTCAGATGGGACCCGATGC...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTGACTTGATCCGGGCTAAGCAGGCAGGGAAGAACAGGTCTGTTTTTCCACCCGGGCCAATGCTGGGATaGATAGTACTGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SDLIRAKQAGKNRSVFPPGPMLG*IVLQAF
Trigger: GAAAGCCTGCAGTACTATGCATCCCAGCATTGGCCC...GGGTGGAAAAACAGACCTGTTCTTCCCTGCCTGCTTAGCCCGGATCAAGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372997.3
3UTR CAA 72 bp TGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTaGATCCGGGCTAAGCAGGCAGGGAAGAACAGGTCT +
Preference number: 4 (lower is better)
Translates to: CPSGIPRSDLSD*IRAKQAGKNRS
Trigger: AGACCTGTTCTTCCCTGCCTGCTTAGCCCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR TCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGCATCTGACACCAGCGTaGTCGCCACAGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRHLTPA*SPQEPS
Trigger: AGATGGCTCCTGTGGCGATCACGCTGGTGTCAGATG...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTAGCATCGGGTCCCATCTaGCACCAGCGTGATCGCCAC +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLASGPI*HQRDRH
Trigger: GTGGCGATCACGCTGGTGTCAGATGGGACCCGATGC...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGGGCACACACGCTTGCTaGCAGCCACGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTEGTHAC*QPRSSW
Trigger: CCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCC...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGGAAGAGCTTGAGCCGTaGACAGCAAGGAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIREELEP*TARRHP
Trigger: GGGATGCCTCCTTGCTGTCCACGGCTCAAGCTCTTC...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGGAAGAGCTTGAGCCGTaGACAGCAAGGAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELEELEP*TARRHP
Trigger: GGGATGCCTCCTTGCTGTCCACGGCTCAAGCTCTTC...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGCAGCCACGTTCTTCTTaGTGGGCTGCCCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRQPRSS*WAAHFC
Trigger: GCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTG...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCAGCCACGTTCTTCTTaGTGGGCTGCCCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTEQPRSS*WAAHFC
Trigger: GCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTG...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGACGGCTTCCGTTCCCTaGAGGGACCATTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRTASVP*RDHCCF
Trigger: GAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGT...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGACATCTGACACCAGCGTaGTCGCCACAGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERHLTPA*SPQEPS
Trigger: AGATGGCTCCTGTGGCGATCACGCTGGTGTCAGATG...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCATCGGGTCCCATCTaGCACCAGCGTGATCGCCAC +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTASGPI*HQRDRH
Trigger: GTGGCGATCACGCTGGTGTCAGATGGGACCCGATGC...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGAAGGGCACACACGCTTaGTGCCAGCCACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRKGTHA*CQPRSS
Trigger: AGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTT...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGTGTAGGCTCACCCTTTaGTCTGCCCTTCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTECRLTL*SALLRS
Trigger: GGACCTCAGAAGGGCAGAGCAAAGGGTGAGCCTACA...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGTGTAGGCTCACCCTTTaGTCTGCCCTTCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELCRLTL*SALLRS
Trigger: GGACCTCAGAAGGGCAGAGCAAAGGGTGAGCCTACA...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGCCACGTTCTTCTTGGTaGGCTGCCCACTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQPRSSW*AAHFCC
Trigger: GCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGG...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGACAGCCACGTTCTTCTTaGTGGGCTGCCCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERQPRSS*WAAHFC
Trigger: GCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTG...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAACAGCCACGTTCTTCTTaGTGGGCTGCCCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKQPRSS*WAAHFC
Trigger: GCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTG...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTTTGGGAAAGGAGCTTTaGCGGGCAAGCAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALLGKEL*RASRHR
Trigger: CCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAA...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TGGGAGATGGCTAACTTAGGGGGCAGCCAGAATGGGAAAGTCCCATTCTGTTGCTCTCTCAAGTTCACCTaGATTTCTGTCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: WEMANLGGSQNGKVPFCCSLKFT*ISVCPG
Trigger: ACCAGGGCAGACAGAAATCCAGGTGAACTTGAGAGA...GCAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCTAAGTTAGCCATCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR TCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAGTGGCTACCTCATCATaGCTGAACCAGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERVATSS*LNQAAV
Trigger: GACAGCTGCCTGGTTCAGTCATGATGAGGTAGCCAC...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CCAAGGAGCGATCTAAGTGACTTGATCCGGGCTAAGCAGGCAGGGAAGAACAGGCTTAGAGAAAATGACTaGACAAGGGCCTACATCCAA +
Preference number: 4 (lower is better)
Translates to: PRSDLSDLIRAKQAGKNRLREND*TRAYIQ
Trigger: TTGGATGTAGGCCCTTGTTCAGTCATTTTCTCTAAG...CCTGTTCTTCCCTGCCTGCTTAGCCCGGATCAAGTCACTTAGATCGCTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR GCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGTTCTTCTTGGTGGGCTaGCCACTTCTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELFFLVG*PLLLQN
Trigger: GTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAA...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTAAGGGCACACACGCTTaGTGCCAGCCACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALKGTHA*CQPRSS
Trigger: AGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTT...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGCTCACCCTTTGCTCTaGCCTTCTGAGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQAHPLL*PSEVLL
Trigger: CAGAAGGACCTCAGAAGGGCAGAGCAAAGGGTGAGC...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGGGGCCAATGCTGGGATaGATAGTACTGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELGPMLG*IVLQAF
Trigger: GAAAGCCTGCAGTACTATGCATCCCAGCATTGGCCC...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAATGGAGGGACCATTGCTaGTTCTGCCACACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKWRDHC*FCHTSQ
Trigger: CTGGGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCA...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGGAAGAGCTTGAGCCGTaGACAGCAAGGAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQEELEP*TARRHP
Trigger: GGGATGCCTCCTTGCTGTCCACGGCTCAAGCTCTTC...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAGGGGGCAGCCAGAATaGGAAAGTCCCATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELRGQPE*ESPILL
Trigger: CAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCT...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGACGGCTTCCGTTCCCTaGAGGGACCATTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQTASVP*RDHCCF
Trigger: GAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGT...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGTTGGGAAAGGAGCTTTaGCGGGCAAGCAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQLGKEL*RASRHR
Trigger: CCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAA...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CATTCTGTTGCTGAGTATAGGGGCCCTTTCTCTTCAGGGCTGTGGCTACCTCATGATTTCTGTCTGCCCTaGTTTCACAGTTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: HSVAEYRGPFSSGLWLPHDFCLP*FHSCMA
Trigger: TGCCATGCAACTGTGAAACCAGGGCAGACAGAAATC...ATGAGGTAGCCACAGCCCTGAAGAGAAAGGGCCCCTATACTCAGCAACAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR TCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGCAGGTATTGATGTGCTaGAGTCTGAAGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRQVLMC*SLKQRS
Trigger: GCTCCTCTGCTTCAGACTTCAGCACATCAATACCTG...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGCAGGTATTGATGTGCTaGAGTCTGAAGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELQVLMC*SLKQRS
Trigger: GCTCCTCTGCTTCAGACTTCAGCACATCAATACCTG...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGACCCTGGGTCACAAACTaGGCATGTGACAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERPWVTN*ACDRAE
Trigger: TTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGG...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGCAGCGGAGAAGAGCTTaGGCCACTTATGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELQRRRA*ATYGKG
Trigger: TCCTTTTCCATAAGTGGCTCAAGCTCTTCTCCGCTG...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537969.5
CDS-3UTR GCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGGCAAACCATGCTTCCTaGTGCTCAGAGCATCCAATC +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRANHAS*CSEHPI
Trigger: GATTGGATGCTCTGAGCAGCAGGAAGCATGGTTTGC...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATGGGCTGCCCACTTCTaGTGCAGAACTGATGAGCAT +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERWAAHF*CRTDEH
Trigger: ATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCA...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTTTCTTCTTGGTGGGCTaGCCACTTCTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALFFLVG*PLLLQN
Trigger: GTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAA...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGGCACACACGCTTGCTaGCAGCCACGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTGTHAC*QPRSSW
Trigger: CCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCC...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTAAAGGGCACACACGCTTaGTGCCAGCCACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLKGTHA*CQPRSS
Trigger: AGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTT...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGAGGGGGCAGCCAGAATaGGAAAGTCCCATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQRGQPE*ESPILL
Trigger: CAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCT...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAAGGGGGCAGCCAGAATaGGAAAGTCCCATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERRGQPE*ESPILL
Trigger: CAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCT...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAACGGCTTCCGTTCCCTaGAGGGACCATTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTTASVP*RDHCCF
Trigger: GAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGT...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGCAACTTCTCGGCGGATaGTCTCTTCCACACTTTCAC +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELQLLGG*SLPHFH
Trigger: GTGAAAGTGTGGAAGAGACCATCCGCCGAGAAGTTG...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAACAGGTATTGATGTGCTaGAGTCTGAAGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKQVLMC*SLKQRS
Trigger: GCTCCTCTGCTTCAGACTTCAGCACATCAATACCTG...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGCAGGTATTGATGTGCTaGAGTCTGAAGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQQVLMC*SLKQRS
Trigger: GCTCCTCTGCTTCAGACTTCAGCACATCAATACCTG...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGTCCCTTGCATTGAGTTaGAAGAGTGCCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTESLALS*KSAFLS
Trigger: GCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGA...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR TCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGTCCCTTGCATTGAGTTaGAAGAGTGCCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRSLALS*KSAFLS
Trigger: GCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGA...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR TCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAGGCATCCCTTGCATTaGGTTGAAAGAGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELRHPLH*VERVPF
Trigger: GAAAGGCACTCTTTCAACTCAATGCAAGGGATGCCT...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR TCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTTCCCCCTGATTTTTaGCAGTTGACAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTELPPDF*QLTAHQ
Trigger: CTGATGAGCTGTCAACTGTCAAAAATCAGGGGGAAG...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCCCTGGGTCACAAACTaGGCATGTGACAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQPWVTN*ACDRAE
Trigger: TTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGG...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGATCCAGAGCAAACCATaGTTCCTGCTGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQIQSKP*FLLLRA
Trigger: TGCTCTGAGCAGCAGGAAGCATGGTTTGCTCTGGAT...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAATCCAGAGCAAACCATaGTTCCTGCTGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERIQSKP*FLLLRA
Trigger: TGCTCTGAGCAGCAGGAAGCATGGTTTGCTCTGGAT...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGTGGGCTGCCCACTTCTaGTGCAGAACTGATGAGCAT +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQWAAHF*CRTDEH
Trigger: ATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCA...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATTCTTCTTGGTGGGCTaGCCACTTCTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLFFLVG*PLLLQN
Trigger: GTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAA...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGTTCTTCTTGGTGGGCTaGCCACTTCTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQFFLVG*PLLLQN
Trigger: GTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAA...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCTCACCCTTTGCTCTaGCCTTCTGAGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTAHPLL*PSEVLL
Trigger: CAGAAGGACCTCAGAAGGGCAGAGCAAAGGGTGAGC...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGGGGCCAATGCTGGGATaGATAGTACTGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQGPMLG*IVLQAF
Trigger: GAAAGCCTGCAGTACTATGCATCCCAGCATTGGCCC...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTAGGGCCAATGCTGGGATaGATAGTACTGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLGPMLG*IVLQAF
Trigger: GAAAGCCTGCAGTACTATGCATCCCAGCATTGGCCC...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAAGACCATTGCTGCTTCTaGCACACTTCCCAGAATCCT +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKDHCCF*HTSQNP
Trigger: AGGATTCTGGGAAGTGTGGCAGAAGCAGCAATGGTC...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCCCCTGGAGGGACCATTaGTGCTTCTGCCACACTTCC +
Preference number: 4 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLPWRDH*CFCHTS
Trigger: GGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGG...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGGGGGCAGCCAGAATaGGAAAGTCCCATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQRGQPE*ESPILL
Trigger: CAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCT...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGTCTCTCAAGTTCACCTaGATTTCTGTCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRSLKFT*ISVCPG
Trigger: ACCAGGGCAGACAGAAATCCAGGTGAACTTGAGAGA...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAACATTGTCAGGTCTCTaGATTCTTTTCGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERTLSGL*ILFGAP
Trigger: AGGTGCCCCGAAAAGAATTCAGAGACCTGACAATGT...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGCTTAGTAACATAGGTTaGCAGCAGCCTATAGCACCA +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRLSNIG*QQPIAP
Trigger: TGGTGCTATAGGCTGCTGTCAACCTATGTTACTAAG...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCCCTTGCATTGAGTTaGAAGAGTGCCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERSLALS*KSAFLS
Trigger: GCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGA...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR TCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTAGGCATCCCTTGCATTaGGTTGAAAGAGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALRHPLH*VERVPF
Trigger: GAAAGGCACTCTTTCAACTCAATGCAAGGGATGCCT...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR TCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAAGGCATCCCTTGCATTaGGTTGAAAGAGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERRHPLH*VERVPF
Trigger: GAAAGGCACTCTTTCAACTCAATGCAAGGGATGCCT...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR TCA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCGTGGCTACCTCATCATaGCTGAACCAGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLVATSS*LNQAAV
Trigger: GACAGCTGCCTGGTTCAGTCATGATGAGGTAGCCAC...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAACTTCCCCCTGATTTTTaGCAGTTGACAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKLPPDF*QLTAHQ
Trigger: CTGATGAGCTGTCAACTGTCAAAAATCAGGGGGAAG...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGCTTCCCCCTGATTTTTaGCAGTTGACAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQLPPDF*QLTAHQ
Trigger: CTGATGAGCTGTCAACTGTCAAAAATCAGGGGGAAG...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGACACTGTATCTTCAGTaGCCCTCATTCAATCGTGTC +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTETLYLQ*PSFNRV
Trigger: GACACGATTGAATGAGGGTCACTGAAGATACAGTGT...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTGGCACACACGCTTGCTaGCAGCCACGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCGTHAC*QPRSSW
Trigger: CCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCC...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGCCCTGGTTTCACAGTTaGATGGCAAGCAATCATGAG +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQPWFHS*MASNHE
Trigger: CTCATGATTGCTTGCCATGCAACTGTGAAACCAGGG...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTCCCTGGAGGGACCATTaGTGCTTCTGCCACACTTCC +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCPWRDH*CFCHTS
Trigger: GGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGG...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTGACTTGATCCGGGCTAAGCAGGCAGGGAAGAACAGGTCTGTTTTTCCACCCAATAGATTATATTATTaGAAGGGCACACACGCTTGC +
Preference number: 4 (lower is better)
Translates to: SDLIRAKQAGKNRSVFPPNRLYY*KGTHAC
Trigger: GCAAGCGTGTGTGCCCTTCCAATAATATAATCTATT...GGGTGGAAAAACAGACCTGTTCTTCCCTGCCTGCTTAGCCCGGATCAAGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR CCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAAGGGGGCAGCCAGAATaGGAAAGTCCCATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTRGQPE*ESPILL
Trigger: CAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCT...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGTCCTTAATCAGTTGGTaGGAGATGGCTAACTTAGGG +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELSLISW*EMANLG
Trigger: CCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGA...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTACAGAATACATTCCCTTaGGAAAGGAGCTTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLQNTFP*ERSFGG
Trigger: CCCGCCAAAGCTCCTTTCCCAAGGGAATGTATTCTG...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTACAACTTCTCGGCGGATaGTCTCTTCCACACTTTCAC +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLQLLGG*SLPHFH
Trigger: GTGAAAGTGTGGAAGAGACCATCCGCCGAGAAGTTG...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTCTCAAGTTCACCTaGATTTCTGTCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERSLKFT*ISVCPG
Trigger: ACCAGGGCAGACAGAAATCCAGGTGAACTTGAGAGA...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTCTTAGTAACATAGGTTaGCAGCAGCCTATAGCACCA +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALLSNIG*QQPIAP
Trigger: TGGTGCTATAGGCTGCTGTCAACCTATGTTACTAAG...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCCCCTGGGTCACAAACTaGGCATGTGACAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLPWVTN*ACDRAE
Trigger: TTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGG...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACACATCTGACACCAGCGTaGTCGCCACAGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTHLTPA*SPQEPS
Trigger: AGATGGCTCCTGTGGCGATCACGCTGGTGTCAGATG...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTGCAAGCAATCATGAGTaGGCCACTAGGGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCASNHE*ATREGP
Trigger: TGGCCCTTCCCTAGTGGCTCACTCATGATTGCTTGC...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TGGGAGATGGCTAACTTAGGGGGCAGCCAGAATGGGAAAGTCCCATTCTGTTGCATCTTCTATTCTTTGTaGATCCTGTCCAAATTTACC +
Preference number: 4 (lower is better)
Translates to: WEMANLGGSQNGKVPFCCIFYSL*ILSKFT
Trigger: GGTAAATTTGGACAGGATGCACAAAGAATAGAAGAT...GCAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCTAAGTTAGCCATCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR GCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCAAGGAGGCATCCCTTaGATTGAGTTGAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQQGGIP*IELKEC
Trigger: GCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTG...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTACAAGGAGGCATCCCTTaGATTGAGTTGAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLQGGIP*IELKEC
Trigger: GCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTG...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR GCA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCTGGGCTGCCCACTTCTaGTGCAGAACTGATGAGCAT +
Preference number: 4 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLWAAHF*CRTDEH
Trigger: ATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCA...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAGGCACACACGCTTGCTaGCAGCCACGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTGTHAC*QPRSSW
Trigger: CCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCC...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTGCTCACCCTTTGCTCTaGCCTTCTGAGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCAHPLL*PSEVLL
Trigger: CAGAAGGACCTCAGAAGGGCAGAGCAAAGGGTGAGC...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGAACACGTTGTGGATGTaGAAATGCCAGCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTENTLWM*KCQQLF
Trigger: AAACAGTTGCTGGCATTTGCACATCCACAACGTGTT...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCCCTGGTTTCACAGTTaGATGGCAAGCAATCATGAG +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQPWFHS*MASNHE
Trigger: CTCATGATTGCTTGCCATGCAACTGTGAAACCAGGG...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTTGGAGGGACCATTGCTaGTTCTGCCACACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCWRDHC*FCHTSQ
Trigger: CTGGGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCA...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTTCCTTAATCAGTTGGTaGGAGATGGCTAACTTAGGG +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALSLISW*EMANLG
Trigger: CCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGA...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGTCCTTAATCAGTTGGTaGGAGATGGCTAACTTAGGG +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQSLISW*EMANLG
Trigger: CCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGA...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGCACTCCTTAATCAGTTaGTGGGAGATGGCTAACTTA +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRHSLIS*WEMANL
Trigger: TAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTG...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGCACTCCTTAATCAGTTaGTGGGAGATGGCTAACTTA +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELHSLIS*WEMANL
Trigger: TAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTG...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATGTCTGGAGTCCCATTaGGATTCTACTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERCLESH*DSTSST
Trigger: TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACA...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTTGTCTGGAGTCCCATTaGGATTCTACTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALCLESH*DSTSST
Trigger: TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACA...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGGAAATAGGTCAGGTTTaGCATCTGTTTATCTCCACC +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTEEIGQV*HLFIST
Trigger: GGTGGAGATAAACAGATGCCAAACCTGACCTATTTC...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGGAAATAGGTCAGGTTTaGCATCTGTTTATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIREIGQV*HLFIST
Trigger: GGTGGAGATAAACAGATGCCAAACCTGACCTATTTC...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACATTGGGAAAGGAGCTTTaGCGGGCAAGCAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTLGKEL*RASRHR
Trigger: CCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAA...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACACAACTTCTCGGCGGATaGTCTCTTCCACACTTTCAC +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTQLLGG*SLPHFH
Trigger: GTGAAAGTGTGGAAGAGACCATCCGCCGAGAAGTTG...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGTCTCTCAAGTTCACCTaGATTTCTGTCTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQSLKFT*ISVCPG
Trigger: ACCAGGGCAGACAGAAATCCAGGTGAACTTGAGAGA...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR CAA 72 bp GAAAACAGCGAAAAAGATTTACTGTCTGGAGTCCCATaGGGATTCTACTTCCTCAACAGAGCCTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ENSEKDLLSGVP*GFYFLNRASGH
Trigger: ATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCTTAGTAACATAGGTTaGCAGCAGCCTATAGCACCA +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQLSNIG*QQPIAP
Trigger: TGGTGCTATAGGCTGCTGTCAACCTATGTTACTAAG...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATTCTCCTTTGTCAACTaGTCTCTAGTTTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERFSFVN*SLVCPS
Trigger: TGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAA...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGGAGCCTCAGGGCATCTaGTTTATTATAAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIREPQGI*FIIKYS
Trigger: AGAGTACTTTATAATAAATCAGATGCCCTGAGGCTC...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAGCAAGCAATCATGAGTaGGCCACTAGGGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTASNHE*ATREGP
Trigger: TGGCCCTTCCCTAGTGGCTCACTCATGATTGCTTGC...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTTGGGCTGCCCACTTCTaGTGCAGAACTGATGAGCAT +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCWAAHF*CRTDEH
Trigger: ATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCA...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTTTCTTCTTGGTGGGCTaGCCACTTCTGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCFFLVG*PLLLQN
Trigger: GTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAA...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAAAGGGCACACACGCTTaGTGCCAGCCACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTKGTHA*CQPRSS
Trigger: AGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTT...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAAAACACGTTGTGGATGTaGAAATGCCAGCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKNTLWM*KCQQLF
Trigger: AAACAGTTGCTGGCATTTGCACATCCACAACGTGTT...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTAACACGTTGTGGATGTaGAAATGCCAGCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALNTLWM*KCQQLF
Trigger: AAACAGTTGCTGGCATTTGCACATCCACAACGTGTT...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAAACACGTTGTGGATGTaGAAATGCCAGCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERNTLWM*KCQQLF
Trigger: AAACAGTTGCTGGCATTTGCACATCCACAACGTGTT...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACACCCTGGTTTCACAGTTaGATGGCAAGCAATCATGAG +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTPWFHS*MASNHE
Trigger: CTCATGATTGCTTGCCATGCAACTGTGAAACCAGGG...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAACACTCCTTAATCAGTTaGTGGGAGATGGCTAACTTA +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKHSLIS*WEMANL
Trigger: TAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTG...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGTTAATCAACACGTTGTaGATGTGCAAATGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRLINTL*MCKCQQ
Trigger: TTGCTGGCATTTGCACATCCACAACGTGTTGATTAA...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGAAATAGGTCAGGTTTaGCATCTGTTTATCTCCACC +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQEIGQV*HLFIST
Trigger: GGTGGAGATAAACAGATGCCAAACCTGACCTATTTC...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGGGTTTCACAGTTGCATaGCAAGCAATCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQGFTVA*QAIMSE
Trigger: CTCACTCATGATTGCTTGCCATGCAACTGTGAAACC...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTAGGTTTCACAGTTGCATaGCAAGCAATCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLGFTVA*QAIMSE
Trigger: CTCACTCATGATTGCTTGCCATGCAACTGTGAAACC...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCACATTGTCAGGTCTCTaGATTCTTTTCGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLTLSGL*ILFGAP
Trigger: AGGTGCCCCGAAAAGAATTCAGAGACCTGACAATGT...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCTCCCTTGCATTGAGTTaGAAGAGTGCCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLSLALS*KSAFLS
Trigger: GCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGA...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR TCA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCAGGCATCCCTTGCATTaGGTTGAAAGAGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLRHPLH*VERVPF
Trigger: GAAAGGCACTCTTTCAACTCAATGCAAGGGATGCCT...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR TCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGTTCTCCTTTGTCAACTaGTCTCTAGTTTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQFSFVN*SLVCPS
Trigger: TGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAA...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATTCTCCTTTGTCAACTaGTCTCTAGTTTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLFSFVN*SLVCPS
Trigger: TGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAA...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGCTTAGAGAAAATGACTaGACAAGGGCCTACATCCAA +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQLREND*TRAYIQ
Trigger: TTGGATGTAGGCCCTTGTTCAGTCATTTTCTCTAAG...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAAGAGCCTCAGGGCATCTaGTTTATTATAAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKEPQGI*FIIKYS
Trigger: AGAGTACTTTATAATAAATCAGATGCCCTGAGGCTC...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACACCCTGGGTCACAAACTaGGCATGTGACAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTPWVTN*ACDRAE
Trigger: TTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGG...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAAGCAAGCAATCATGAGTaGGCCACTAGGGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKASNHE*ATREGP
Trigger: TGGCCCTTCCCTAGTGGCTCACTCATGATTGCTTGC...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTATCCAGAGCAAACCATaGTTCCTGCTGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCIQSKP*FLLLRA
Trigger: TGCTCTGAGCAGCAGGAAGCATGGTTTGCTCTGGAT...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACATGGGCTGCCCACTTCTaGTGCAGAACTGATGAGCAT +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTWAAHF*CRTDEH
Trigger: ATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCA...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAATAGATTATATTATTaGAAGGGCACACACGCTTGC +
Preference number: 4 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELNRLYY*KGTHAC
Trigger: GCAAGCGTGTGTGCCCTTCCAATAATATAATCTATT...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGAAAAGATTTACTGTCTaGAGTCCCATTGGGATTCTA +
Preference number: 4 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRKRFTV*SPIGIL
Trigger: TAGAATCCCAATGGGACTCCAGACAGTAAATCTTTT...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGTTAATCAACACGTTGTaGATGTGCAAATGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQLINTL*MCKCQQ
Trigger: TTGCTGGCATTTGCACATCCACAACGTGTTGATTAA...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATTAATCAACACGTTGTaGATGTGCAAATGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERLINTL*MCKCQQ
Trigger: TTGCTGGCATTTGCACATCCACAACGTGTTGATTAA...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTCAGAATACATTCCCTTaGGAAAGGAGCTTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCQNTFP*ERSFGG
Trigger: CCCGCCAAAGCTCCTTTCCCAAGGGAATGTATTCTG...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAAGCTTGAGCCACTTATaGAAAAGGAGCTATCCAGAC +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTSLSHL*KRSYPD
Trigger: GTCTGGATAGCTCCTTTTCCATAAGTGGCTCAAGCT...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537969.5
CDS-3UTR TCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTACATTGTCAGGTCTCTaGATTCTTTTCGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCTLSGL*ILFGAP
Trigger: AGGTGCCCCGAAAAGAATTCAGAGACCTGACAATGT...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTAGAGCCTCAGGGCATCTaGTTTATTATAAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLEPQGI*FIIKYS
Trigger: AGAGTACTTTATAATAAATCAGATGCCCTGAGGCTC...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGATCTTCTATTCTTTGTaGATCCTGTCCAAATTTACC +
Preference number: 4 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTEIFYSL*ILSKFT
Trigger: GGTAAATTTGGACAGGATGCACAAAGAATAGAAGAT...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACACTTCTGAGGTCCTTCTaGAGCTTATCTTTTGTCACT +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTLLRSF*SLSFVT
Trigger: AGTGACAAAAGATAAGCTGCAGAAGGACCTCAGAAG...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTTATATCACAAAAACCTaGCAAGGCAGAATACATTCC +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALYITKT*QGRIHS
Trigger: GGAATGTATTCTGCCTTGGCAGGTTTTTGTGATATA...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTCCCTGGTTTCACAGTTaGATGGCAAGCAATCATGAG +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCPWFHS*MASNHE
Trigger: CTCATGATTGCTTGCCATGCAACTGTGAAACCAGGG...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAGACCATTGCTGCTTCTaGCACACTTCCCAGAATCCT +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTDHCCF*HTSQNP
Trigger: AGGATTCTGGGAAGTGTGGCAGAAGCAGCAATGGTC...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTAATAGATTATATTATTaGAAGGGCACACACGCTTGC +
Preference number: 4 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALNRLYY*KGTHAC
Trigger: GCAAGCGTGTGTGCCCTTCCAATAATATAATCTATT...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAAAAAGATTTACTGTCTaGAGTCCCATTGGGATTCTA +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERKRFTV*SPIGIL
Trigger: TAGAATCCCAATGGGACTCCAGACAGTAAATCTTTT...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATTAGGAAAACAGGCATaGCAAAGCAATAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLLCQLISSLSLRNTKERLGKQA*QSNSLF
Trigger: GAAAAGACTATTGCTTTGCCATGCCTGTTTTCCTAA...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAATTAGGAAAACAGGCATaGCAAAGCAATAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKLGKQA*QSNSLF
Trigger: GAAAAGACTATTGCTTTGCCATGCCTGTTTTCCTAA...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGTTAGGAAAACAGGCATaGCAAAGCAATAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQLGKQA*QSNSLF
Trigger: GAAAAGACTATTGCTTTGCCATGCCTGTTTTCCTAA...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATTAATCAACACGTTGTaGATGTGCAAATGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLLINTL*MCKCQQ
Trigger: TTGCTGGCATTTGCACATCCACAACGTGTTGATTAA...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAAATAGGTCAGGTTTaGCATCTGTTTATCTCCACC +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTEIGQV*HLFIST
Trigger: GGTGGAGATAAACAGATGCCAAACCTGACCTATTTC...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACACAACTTCTCGGCGGATaGTCTCTTCCACACTTTCAC +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTQLLGG*SLPHFH
Trigger: GTGAAAGTGTGGAAGAGACCATCCGCCGAGAAGTTG...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTGATTTCTGTCTGCCCTaGTTTCACAGTTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCDFCLP*FHSCMA
Trigger: TGCCATGCAACTGTGAAACCAGGGCAGACAGAAATC...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAACATTGTCAGGTCTCTaGATTCTTTTCGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTTLSGL*ILFGAP
Trigger: AGGTGCCCCGAAAAGAATTCAGAGACCTGACAATGT...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACACTTCCCCCTGATTTTTaGCAGTTGACAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTLPPDF*QLTAHQ
Trigger: CTGATGAGCTGTCAACTGTCAAAAATCAGGGGGAAG...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGTATATCACAAAAACCTaGCAAGGCAGAATACATTCC +
Preference number: 4 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQYITKT*QGRIHS
Trigger: GGAATGTATTCTGCCTTGGCAGGTTTTTGTGATATA...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTTCCTTAATCAGTTGGTaGGAGATGGCTAACTTAGGG +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCSLISW*EMANLG
Trigger: CCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGA...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAGATTTCTGTCTGCCCTaGTTTCACAGTTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTDFCLP*FHSCMA
Trigger: TGCCATGCAACTGTGAAACCAGGGCAGACAGAAATC...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAAACATTGTCAGGTCTCTaGATTCTTTTCGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKTLSGL*ILFGAP
Trigger: AGGTGCCCCGAAAAGAATTCAGAGACCTGACAATGT...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTAATCTTCTATTCTTTGTaGATCCTGTCCAAATTTACC +
Preference number: 4 (lower is better)
Translates to: SPIGILLPQQSLRASDLLIFYSL*ILSKFT
Trigger: GGTAAATTTGGACAGGATGCACAAAGAATAGAAGAT...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAAGGAGGCATCCCTTaGATTGAGTTGAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKQGGIP*IELKEC
Trigger: GCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTG...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTCTTCTGAGGTCCTTCTaGAGCTTATCTTTTGTCACT +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCLLRSF*SLSFVT
Trigger: AGTGACAAAAGATAAGCTGCAGAAGGACCTCAGAAG...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTAACACGTTGTGGATGTaGAAATGCCAGCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCNTLWM*KCQQLF
Trigger: AAACAGTTGCTGGCATTTGCACATCCACAACGTGTT...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACATATATCACAAAAACCTaGCAAGGCAGAATACATTCC +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTYITKT*QGRIHS
Trigger: GGAATGTATTCTGCCTTGGCAGGTTTTTGTGATATA...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACATTAGGAAAACAGGCATaGCAAAGCAATAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTLGKQA*QSNSLF
Trigger: GAAAAGACTATTGCTTTGCCATGCCTGTTTTCCTAA...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAGGTTTCACAGTTGCATaGCAAGCAATCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTGFTVA*QAIMSE
Trigger: CTCACTCATGATTGCTTGCCATGCAACTGTGAAACC...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR TCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAAACACTGTATCTTCAGTaGCCCTCATTCAATCGTGTC +
Preference number: 4 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKTLYLQ*PSFNRV
Trigger: GACACGATTGAATGAGGGTCACTGAAGATACAGTGT...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR GCA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAATCTTCTATTCTTTGTaGATCCTGTCCAAATTTACC +
Preference number: 4 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTIFYSL*ILSKFT
Trigger: GGTAAATTTGGACAGGATGCACAAAGAATAGAAGAT...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAATCCTTAATCAGTTGGTaGGAGATGGCTAACTTAGGG +
Preference number: 4 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKSLISW*EMANLG
Trigger: CCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGA...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACACACTCCTTAATCAGTTaGTGGGAGATGGCTAACTTA +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTHSLIS*WEMANL
Trigger: TAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTG...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTAAAAGATTTACTGTCTaGAGTCCCATTGGGATTCTA +
Preference number: 4 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCKRFTV*SPIGIL
Trigger: TAGAATCCCAATGGGACTCCAGACAGTAAATCTTTT...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
3UTR CAA 72 bp TGTTTATCTCCACCAATCCCTTTGTTAATCAACACGTaGTGGATGTGCAAATGCCAGCAACTGTTTTATTTA +
Preference number: 4 (lower is better)
Translates to: CLSPPIPLLINT*WMCKCQQLFYL
Trigger: TAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAACAAAGGGATTGGTGGAGATAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAAATAGATTATATTATTaGAAGGGCACACACGCTTGC +
Preference number: 4 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTNRLYY*KGTHAC
Trigger: GCAAGCGTGTGTGCCCTTCCAATAATATAATCTATT...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CCA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAAAATAGATTATATTATTaGAAGGGCACACACGCTTGC +
Preference number: 4 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKNRLYY*KGTHAC
Trigger: GCAAGCGTGTGTGCCCTTCCAATAATATAATCTATT...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS GCA 90 bp GCTTGCTGCCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTCTGCTaGAGAACTGATGAGCATCATGCCAGCGGAGAAGAGCTTGAGCCG +
Preference number: 5 (lower is better)
Translates to: ACCQPRSSWWAAHFC*RTDEHHASGEELEP
Trigger: CGGCTCAAGCTCTTCTCCGCTGGCATGATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 90 bp CACGCTTGCTGCCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTCTaGTGCAGAACTGATGAGCATCATGCCAGCGGAGAAGAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: HACCQPRSSWWAAHF*CRTDEHHASGEELE
Trigger: CTCAAGCTCTTCTCCGCTGGCATGATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 90 bp GCTTGCTGCCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTCTGCTaGAGAACTGATGAGCATCATGCCAGCGGAGAAGAGCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: ACCQPRSSWWAAHFC*RTDEHHASGEELEP
Trigger: TGGCTCAAGCTCTTCTCCGCTGGCATGATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537969.5
CDS TCA 90 bp CTTGGGAAAGGAGCTTTGGCGGGCAAGCAGGCATCGGGTCCCATCTaGCACCAGCGTGATCGCCACAGGAGCCATCTGTGGATAATAGAT +
Preference number: 5 (lower is better)
Translates to: LGKGALAGKQASGPI*HQRDRHRSHLWIID
Trigger: ATCTATTATCCACAGATGGCTCCTGTGGCGATCACGCTGGTGTCAGATGGGACCCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 90 bp TATTGGAAGGGCACACACGCTTGCTGCCAGCCACGTTCTTCTTGGTaGGCTGCCCACTTCTGCTGCAGAACTGATGAGCATCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: YWKGTHACCQPRSSW*AAHFCCRTDEHHAS
Trigger: GCTGGCATGATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 90 bp CAAAAACCTGCCAAGGCAGAATACATTCCCTTGGGAAAGGAGCTTTaGCGGGCAAGCAGGCATCGGGTCCCATCTGACACCAGCGTGATC +
Preference number: 5 (lower is better)
Translates to: QKPAKAEYIPLGKEL*RASRHRVPSDTSVI
Trigger: GATCACGCTGGTGTCAGATGGGACCCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAGGGAATGTATTCTGCCTTGGCAGGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 90 bp TCACGTTCAACGGCTTCCGTTCCCTGGAGGGACCATTGCTGCTTCTaGCACACTTCCCAGAATCCTCCTAGAGATGCACTCTGGGAATTG +
Preference number: 5 (lower is better)
Translates to: SRSTASVPWRDHCCF*HTSQNPPRDALWEL
Trigger: CAATTCCCAGAGTGCATCTCTAGGAGGATTCTGGGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGTTGAACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 90 bp TATTATTGGAAGGGCACACACGCTTGCTGCCAGCCACGTTCTTCTTaGTGGGCTGCCCACTTCTGCTGCAGAACTGATGAGCATCATGCC +
Preference number: 5 (lower is better)
Translates to: YYWKGTHACCQPRSS*WAAHFCCRTDEHHA
Trigger: GGCATGATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 90 bp AAATGTTCACGTTCAACGGCTTCCGTTCCCTGGAGGGACCATTGCTaGTTCTGCCACACTTCCCAGAATCCTCCTAGAGATGCACTCTGG +
Preference number: 5 (lower is better)
Translates to: KCSRSTASVPWRDHC*FCHTSQNPPRDALW
Trigger: CCAGAGTGCATCTCTAGGAGGATTCTGGGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGTTGAACGTGAACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 90 bp TCCAAATGTTCACGTTCAACGGCTTCCGTTCCCTGGAGGGACCATTaGTGCTTCTGCCACACTTCCCAGAATCCTCCTAGAGATGCACTC +
Preference number: 5 (lower is better)
Translates to: SKCSRSTASVPWRDH*CFCHTSQNPPRDAL
Trigger: GAGTGCATCTCTAGGAGGATTCTGGGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGTTGAACGTGAACATTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS-3UTR CAA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGCCAGCGGAGAAGAGCTaGAGCCGTGGACAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELPAEKS*SRGQQG
Trigger: TCCTTGCTGTCCACGGCTCAAGCTCTTCTCCGCTGG...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCCAGCGGAGAAGAGCTaGAGCCGTGGACAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTEPAEKS*SRGQQG
Trigger: TCCTTGCTGTCCACGGCTCAAGCTCTTCTCCGCTGG...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGGAAGGGCACACACGCTaGCTGCCAGCCACGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIREGHTR*LPATFF
Trigger: GAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTC...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS TCA 90 bp TTCTGTCTGCCCTGGTTTCACAGTTGCATGGCAAGCAATCATGAGTaGGCCACTAGGGAAGGGCCAATGCTGGGATGCATAGTACTGCAG +
Preference number: 5 (lower is better)
Translates to: FCLPWFHSCMASNHE*ATREGPMLGCIVLQ
Trigger: CTGCAGTACTATGCATCCCAGCATTGGCCCTTCCCTAGTGGCTCACTCATGATTGCTTGCCATGCAACTGTGAAACCAGGGCAGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
CDS CCA 90 bp CTCAAGTTCACCTGGATTTCTGTCTGCCCTGGTTTCACAGTTGCATaGCAAGCAATCATGAGTGAGCCACTAGGGAAGGGCCAATGCTGG +
Preference number: 5 (lower is better)
Translates to: LKFTWISVCPGFTVA*QAIMSEPLGKGQCW
Trigger: CCAGCATTGGCCCTTCCCTAGTGGCTCACTCATGATTGCTTGCCATGCAACTGTGAAACCAGGGCAGACAGAAATCCAGGTGAACTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
CDS CCA 90 bp TGTAGGCTATATCACAAAAACCTGCCAAGGCAGAATACATTCCCTTaGGAAAGGAGCTTTGGCGGGCAAGCAGGCATCGGGTCCCATCTG +
Preference number: 5 (lower is better)
Translates to: CRLYHKNLPRQNTFP*ERSFGGQAGIGSHL
Trigger: CAGATGGGACCCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAGGGAATGTATTCTGCCTTGGCAGGTTTTTGTGATATAGCCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488223.5
ENST00000617744.4
CDS-3UTR CAA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGACCAGCGGAGAAGAGCTaGAGCCGTGGACAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: LLLCQLISSLSLRNTKERPAEKS*SRGQQG
Trigger: TCCTTGCTGTCCACGGCTCAAGCTCTTCTCCGCTGG...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGCCAGCGGAGAAGAGCTaGAGCCGTGGACAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQPAEKS*SRGQQG
Trigger: TCCTTGCTGTCCACGGCTCAAGCTCTTCTCCGCTGG...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAGAAGGGCACACACGCTaGCTGCCAGCCACGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLLCQLISSLSLRNTKEREGHTR*LPATFF
Trigger: GAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTC...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTCTTGGGAAAGGAGCTTaGGCGGGCAAGCAGGCATCG +
Preference number: 5 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALLGKGA*AGKQAS
Trigger: CGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAG...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGACTTGGGAAAGGAGCTTaGGCGGGCAAGCAGGCATCG +
Preference number: 5 (lower is better)
Translates to: LLLCQLISSLSLRNTKERLGKGA*AGKQAS
Trigger: CGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAG...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS GCA 90 bp AGCCGTGGACAGCAAGGAGGCATCCCTTGCATTGAGTTGAAAGAGTaGCTTTCTCAGCTCAATGAAAGACCCCTTGAGCTCTGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SRGQQGGIPCIELKE*LSQLNERPLELCLH
Trigger: ATGGAGACAGAGCTCAAGGGGTCTTTCATTGAGCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTGCTGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 90 bp CCATCTGTGGATAATAGATTATATTATTGGAAGGGCACACACGCTTaGTGCCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSVDNRLYYWKGTHA*CQPRSSWWAAHFCC
Trigger: GCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATCCACAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 90 bp CCTGTGGATAATAGATTATATTATTGGAAGGGCACACACGCTTGCTaGCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTCTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PVDNRLYYWKGTHAC*QPRSSWWAAHFCCR
Trigger: TCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS GCA 90 bp TCACCTGTGGATAATAGATTATATTATTGGAAGGGCACACACGCTTaGTGCCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SPVDNRLYYWKGTHA*CQPRSSWWAAHFCC
Trigger: GCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATCCACAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS CCA 90 bp AAAAGAGGAAACTCCAAATGTTCACGTTCAACGGCTTCCGTTCCCTaGAGGGACCATTGCTGCTTCTGCCACACTTCCCAGAATCCTCCT +
Preference number: 5 (lower is better)
Translates to: KRGNSKCSRSTASVP*RDHCCFCHTSQNPP
Trigger: AGGAGGATTCTGGGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGTTGAACGTGAACATTTGGAGTTTCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS-3UTR CAA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGGAAGGGCACACACGCTaGCTGCCAGCCACGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQEGHTR*LPATFF
Trigger: GAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTC...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS GCA 90 bp TCTGTGGATAATAGATTATATTATTGGAAGGGCACACACGCTTGCTaGCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTCTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SVDNRLYYWKGTHAC*QPRSSWWAAHFCCR
Trigger: TCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATCCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS-3UTR CAA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAGCGATCTAAGTGACTaGATCCGGGCTAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELSDLSD*IRAKQA
Trigger: TGCCTGCTTAGCCCGGATCAAGTCACTTAGATCGCT...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTAGCGATCTAAGTGACTaGATCCGGGCTAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALSDLSD*IRAKQA
Trigger: TGCCTGCTTAGCCCGGATCAAGTCACTTAGATCGCT...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGAAGCGATCTAAGTGACTaGATCCGGGCTAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LLLCQLISSLSLRNTKERSDLSD*IRAKQA
Trigger: TGCCTGCTTAGCCCGGATCAAGTCACTTAGATCGCT...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGCTGTCTGGAGTCCCATaGGGATTCTACTTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRLSGVP*GFYFLN
Trigger: GTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAG...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGCTGTCTGGAGTCCCATaGGGATTCTACTTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: WQSNSLFPGSQTEHVTELLSGVP*GFYFLN
Trigger: GTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAG...CAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACATCCCTGGAGGGACCATaGCTGCTTCTGCCACACTTC +
Preference number: 5 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTSLEGP*LLLPHF
Trigger: GAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGGA...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAACCAGCGGAGAAGAGCTaGAGCCACTTATGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKPAEKS*SHLWKR
Trigger: CCTTTTCCATAAGTGGCTCAAGCTCTTCTCCGCTGG...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537969.5
CDS-3UTR CAA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGACTGTCTGGAGTCCCATaGGGATTCTACTTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: LLLCQLISSLSLRNTKERLSGVP*GFYFLN
Trigger: GTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAG...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCTCCCTGGAGGGACCATaGCTGCTTCTGCCACACTTC +
Preference number: 5 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLSLEGP*LLLPHF
Trigger: GAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGGA...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537969.5
ENST00000544879.5
CDS CCA 90 bp ATGGTCTCTTCCACACTTTCACCTGTGGATAATAGATTATATTATTaGAAGGGCACACACGCTTGCTGCCAGCCACGTTCTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: MVSSTLSPVDNRLYY*KGTHACCQPRSSWW
Trigger: CCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATCCACAGGTGAAAGTGTGGAAGAGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS-3UTR CAA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGGTCTCCATTTCAGGTTaGTGTAAGGAGGCACTTATG +
Preference number: 5 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTEVSISG*CKEALM
Trigger: CATAAGTGCCTCCTTACACAAACCTGAAATGGAGAC...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGTCTCCACCAATCCCTTaGTTAATCAACACGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRSPPIP*LINTLW
Trigger: CCACAACGTGTTGATTAACAAAGGGATTGGTGGAGA...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS GCA 90 bp GAAAAGGAGCTATCCAGACCTAGATCCAGAGCAAACCATGCTTCCTaGTGCTCAGAGCATCCAATCAGCACAGAATCTTCTATTCTTTGT +
Preference number: 5 (lower is better)
Translates to: EKELSRPRSRANHAS*CSEHPISTESSILC
Trigger: ACAAAGAATAGAAGATTCTGTGCTGATTGGATGCTCTGAGCAGCAGGAAGCATGGTTTGCTCTGGATCTAGGTCTGGATAGCTCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS-3UTR CAA 90 bp AGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGCTGAAAACAGCGAAATCAATGAAAGACCCCTaGAGCTCTGTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: SLFPGSQTEHVTELKTAKSMKDP*SSVSIS
Trigger: TGAAATGGAGACAGAGCTCAAGGGGTCTTTCATTGA...TTTCGCTGTTTTCAGCTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAAGAAGGGCACACACGCTaGCTGCCAGCCACGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKEGHTR*LPATFF
Trigger: GAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTC...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTCAACTGATCTCTAGTTaGTCCCTCAGGAATACCAAG +
Preference number: 5 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALQLISS*SLRNTK
Trigger: CTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTG...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGACAACTGATCTCTAGTTaGTCCCTCAGGAATACCAAG +
Preference number: 5 (lower is better)
Translates to: LLLCQLISSLSLRNTKERQLISS*SLRNTK
Trigger: CTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTG...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGTTGTTAATCAACACGTaGTGGATGTGCAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRLLINT*WMCKCQ
Trigger: CTGGCATTTGCACATCCACAACGTGTTGATTAACAA...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp GCATGGCAAAGCAATAGTCTTTTCCCTGGGTCACAAACTGAGCATGTGACAGAGAGAAATAGGTCAGGTTaGGCATCTGTTTATCTCCAC +
Preference number: 5 (lower is better)
Translates to: AWQSNSLFPGSQTEHVTERNRSG*ASVYLH
Trigger: GTGGAGATAAACAGATGCCAAACCTGACCTATTTCT...CTCTGTCACATGCTCAGTTTGTGACCCAGGGAAAAGACTATTGCTTTGCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTAGTCTCCATTTCAGGTTaGTGTAAGGAGGCACTTATG +
Preference number: 5 (lower is better)
Translates to: SPIGILLPQQSLRASDLLVSISG*CKEALM
Trigger: CATAAGTGCCTCCTTACACAAACCTGAAATGGAGAC...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp TCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATCTAAGTGACTTGATCCGGTACAACAGGCACATTTaGGCAGTTAGTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: SLVCPSGIPRSDLSDLIRYNRHI*AVSVNT
Trigger: TGTGTTTACACTAACTGCCAAAATGTGCCTGTTGTA...CCGGATCAAGTCACTTAGATCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCCTGTCTGGAGTCCCATaGGGATTCTACTTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLLSGVP*GFYFLN
Trigger: GTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAG...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp CTTCTCCTTTGTCAACTGATCTCTAGTTTGTCCCTCAGGAATACCAAGGAGCGATTGTTAATCAACACGTaGTGGATGTGCAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: LLLCQLISSLSLRNTKERLLINT*WMCKCQ
Trigger: CTGGCATTTGCACATCCACAACGTGTTGATTAACAA...TCGCTCCTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTGACAAAGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TTAACACTGCTGATAGAAGTGTCTTACTGTAGGCTCACCCTTTGCTCTGCCCTTAGAAATAGGTCAGGTTaGGCATCTGTTTATCTCCAC +
Preference number: 5 (lower is better)
Translates to: LTLLIEVSYCRLTLCSALRNRSG*ASVYLH
Trigger: GTGGAGATAAACAGATGCCAAACCTGACCTATTTCT...AAGGGCAGAGCAAAGGGTGAGCCTACAGTAAGACACTTCTATCAGCAGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp AAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGTACAACAGGCACATTTaGGCAGTTAGTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: KIYCLESHWDSTSSTEPQYNRHI*AVSVNT
Trigger: TGTGTTTACACTAACTGCCAAAATGTGCCTGTTGTA...CTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp CAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACAGTTGTTAATCAACACGTaGTGGATGTGCAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: QRKRFTVWSPIGILLPQQLLINT*WMCKCQ
Trigger: CTGGCATTTGCACATCCACAACGTGTTGATTAACAA...CTGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp ACAGCGAAAAAGATTTACTGTCTGGAGTCCCATTGGGATTCTACTTCCTCAACATCTCCACCAATCCCTTaGTTAATCAACACGTTGTGG +
Preference number: 5 (lower is better)
Translates to: TAKKIYCLESHWDSTSSTSPPIP*LINTLW
Trigger: CCACAACGTGTTGATTAACAAAGGGATTGGTGGAGA...TGTTGAGGAAGTAGAATCCCAATGGGACTCCAGACAGTAAATCTTTTTCGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCGTCTCCATTTCAGGTTaGTGTAAGGAGGCACTTATG +
Preference number: 5 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLVSISG*CKEALM
Trigger: CATAAGTGCCTCCTTACACAAACCTGAAATGGAGAC...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp GGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATAAAGTACTCCAACTGATCTCTAGTTaGTCCCTCAGGAATACCAAG +
Preference number: 5 (lower is better)
Translates to: GFYFLNRASGHLIYYKVLQLISS*SLRNTK
Trigger: CTTGGTATTCCTGAGGGACAAACTAGAGATCAGTTG...GAGTACTTTATAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp AGTCCCATTGGGATTCTACTTCCTCAACAGAGCCTCAGGGCATCTGATTTATTATACAACAGGCACATTTaGGCAGTTAGTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: SPIGILLPQQSLRASDLLYNRHI*AVSVNT
Trigger: TGTGTTTACACTAACTGCCAAAATGTGCCTGTTGTA...TAATAAATCAGATGCCCTGAGGCTCTGTTGAGGAAGTAGAATCCCAATGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTGTCTCCATTTCAGGTTaGTGTAAGGAGGCACTTATG +
Preference number: 5 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCVSISG*CKEALM
Trigger: CATAAGTGCCTCCTTACACAAACCTGAAATGGAGAC...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000544879.5
CDS-3UTR CAA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTTTGTTAATCAACACGTaGTGGATGTGCAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCLLINT*WMCKCQ
Trigger: CTGGCATTTGCACATCCACAACGTGTTGATTAACAA...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp AGTTTAAGAAATAGGTCAGGTTTGGCATCTGTTTATCTCCACCAATCCCTTTGTTACAACAGGCACATTTaGGCAGTTAGTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: SLRNRSGLASVYLHQSLCYNRHI*AVSVNT
Trigger: TGTGTTTACACTAACTGCCAAAATGTGCCTGTTGTA...ACAAAGGGATTGGTGGAGATAAACAGATGCCAAACCTGACCTATTTCTTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp AATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAACAAGAAATAGGTCAGGTTaGGCATCTGTTTATCTCCAC +
Preference number: 5 (lower is better)
Translates to: NQHVVDVQMPATVLFRKTRNRSG*ASVYLH
Trigger: GTGGAGATAAACAGATGCCAAACCTGACCTATTTCT...TGTTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAAAGAAATAGGTCAGGTTaGGCATCTGTTTATCTCCAC +
Preference number: 5 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKRNRSG*ASVYLH
Trigger: GTGGAGATAAACAGATGCCAAACCTGACCTATTTCT...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS-3UTR CAA 90 bp TTAATCAACACGTTGTGGATGTGCAAATGCCAGCAACTGTTTTATTTAGGAAAATACAACAGGCACATTTaGGCAGTTAGTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: LINTLWMCKCQQLFYLGKYNRHI*AVSVNT
Trigger: TGTGTTTACACTAACTGCCAAAATGTGCCTGTTGTA...TTTTCCTAAATAAAACAGTTGCTGGCATTTGCACATCCACAACGTGTTGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000537969.5
ENST00000544879.5
CDS TCA 72 bp GGAGCTTTGGCGGGCAAGCAGGCATCGGGTCCCATCTaGCACCAGCGTGATCGCCACAGGAGCCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: GALAGKQASGPI*HQRDRHRSHLW
Trigger: CCACAGATGGCTCCTGTGGCGATCACGCTGGTGTCAGATGGGACCCGATGCCTGCTTGCCCGCCAAAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 72 bp AAGGGCACACACGCTTGCTGCCAGCCACGTTCTTCTTaGTGGGCTGCCCACTTCTGCTGCAGAACTGATGAG +
Preference number: 6 (lower is better)
Translates to: KGTHACCQPRSS*WAAHFCCRTDE
Trigger: CTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 72 bp GCCAAGGCAGAATACATTCCCTTGGGAAAGGAGCTTTaGCGGGCAAGCAGGCATCGGGTCCCATCTGACACC +
Preference number: 6 (lower is better)
Translates to: AKAEYIPLGKEL*RASRHRVPSDT
Trigger: GGTGTCAGATGGGACCCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAGGGAATGTATTCTGCCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 72 bp TGCCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTCTaGTGCAGAACTGATGAGCATCATGCCAGCGGAGAA +
Preference number: 6 (lower is better)
Translates to: CQPRSSWWAAHF*CRTDEHHASGE
Trigger: TTCTCCGCTGGCATGATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 72 bp ACGGCTTCCGTTCCCTGGAGGGACCATTGCTGCTTCTaGCACACTTCCCAGAATCCTCCTAGAGATGCACTC +
Preference number: 6 (lower is better)
Translates to: TASVPWRDHCCF*HTSQNPPRDAL
Trigger: GAGTGCATCTCTAGGAGGATTCTGGGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS TCA 72 bp GGGCAAGCAGGCATCGGGTCCCATCTGACACCAGCGTaGTCGCCACAGGAGCCATCTGTGGATAATAGATTA +
Preference number: 6 (lower is better)
Translates to: GQAGIGSHLTPA*SPQEPSVDNRL
Trigger: TAATCTATTATCCACAGATGGCTCCTGTGGCGATCACGCTGGTGTCAGATGGGACCCGATGCCTGCTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 72 bp AACTCCAAATGTTCACGTTCAACGGCTTCCGTTCCCTaGAGGGACCATTGCTGCTTCTGCCACACTTCCCAG +
Preference number: 6 (lower is better)
Translates to: NSKCSRSTASVP*RDHCCFCHTSQ
Trigger: CTGGGAAGTGTGGCAGAAGCAGCAATGGTCCCTCCAGGGAACGGAAGCCGTTGAACGTGAACATTTGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 72 bp TATCACAAAAACCTGCCAAGGCAGAATACATTCCCTTaGGAAAGGAGCTTTGGCGGGCAAGCAGGCATCGGG +
Preference number: 6 (lower is better)
Translates to: YHKNLPRQNTFP*ERSFGGQAGIG
Trigger: CCCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAGGGAATGTATTCTGCCTTGGCAGGTTTTTGTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 72 bp ACCTGGATTTCTGTCTGCCCTGGTTTCACAGTTGCATaGCAAGCAATCATGAGTGAGCCACTAGGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: TWISVCPGFTVA*QAIMSEPLGKG
Trigger: GCCCTTCCCTAGTGGCTCACTCATGATTGCTTGCCATGCAACTGTGAAACCAGGGCAGACAGAAATCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
CDS CCA 72 bp CCTCCAATCCCACCTCTTCTGCAACTTCTCGGCGGATaGTCTCTTCCACACTTTCACCTACAAGCACTCAGA +
Preference number: 6 (lower is better)
Translates to: PPIPPLLQLLGG*SLPHFHLQALR
Trigger: TCTGAGTGCTTGTAGGTGAAAGTGTGGAAGAGACCATCCGCCGAGAAGTTGCAGAAGAGGTGGGATTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488223.5
CDS CAA 90 bp AAGAGCTTGAGCCGTGGACAGCAAGGAGGCATCCCTTGCATTGAGTaGAAAGAGTGCCTTTCTCAGCTCAATGAAAGACCCCTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: KSLSRGQQGGIPCIE*KECLSQLNERPLEL
Trigger: GAGCTCAAGGGGTCTTTCATTGAGCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTGCTGTCCACGGCTCAAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000544879.5
ENST00000617744.4
CDS CAA 72 bp AGCCGTGGACAGCAAGGAGGCATCCCTTGCATTGAGTaGAAAGAGTGCCTTTCTCAGCTCAATGAAAGACCC +
Preference number: 6 (lower is better)
Translates to: SRGQQGGIPCIE*KECLSQLNERP
Trigger: GGGTCTTTCATTGAGCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTGCTGTCCACGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000544879.5
ENST00000617744.4
CDS CAA 72 bp ATATCACAAAAACCTGCCAAGGCAGAATACATTCCCTaGGGAAAGGAGCTTTGGCGGGCAAGCAGGCATCGG +
Preference number: 6 (lower is better)
Translates to: ISQKPAKAEYIP*GKELWRASRHR
Trigger: CCGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAGGGAATGTATTCTGCCTTGGCAGGTTTTTGTGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357321.9
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 72 bp CAGCAAGGAGGCATCCCTTGCATTGAGTTGAAAGAGTaGCTTTCTCAGCTCAATGAAAGACCCCTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: QQGGIPCIELKE*LSQLNERPLEL
Trigger: GAGCTCAAGGGGTCTTTCATTGAGCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 72 bp AATAGATTATATTATTGGAAGGGCACACACGCTTGCTaGCAGCCACGTTCTTCTTGGTGGGCTGCCCACTTC +
Preference number: 6 (lower is better)
Translates to: NRLYYWKGTHAC*QPRSSWWAAHF
Trigger: GAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 72 bp GATAATAGATTATATTATTGGAAGGGCACACACGCTTaGTGCCAGCCACGTTCTTCTTGGTGGGCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: DNRLYYWKGTHA*CQPRSSWWAAH
Trigger: GTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS CCA 72 bp CCTCCAATCCCACCTCTTCTGCAACTTCTCGGCGGATaGTCTCTTCCACACTTTCACCTGTGGATAATAGAT +
Preference number: 6 (lower is better)
Translates to: PPIPPLLQLLGG*SLPHFHLWIID
Trigger: ATCTATTATCCACAGGTGAAAGTGTGGAAGAGACCATCCGCCGAGAAGTTGCAGAAGAGGTGGGATTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS CCA 72 bp CCTCCAATCCCACCTCTTCTGCAACTTCTCGGCGGATaGTCTCTTCCACACTTTCACCTATATCACAAAAAC +
Preference number: 6 (lower is better)
Translates to: PPIPPLLQLLGG*SLPHFHLYHKN
Trigger: GTTTTTGTGATATAGGTGAAAGTGTGGAAGAGACCATCCGCCGAGAAGTTGCAGAAGAGGTGGGATTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS TCA 72 bp AGGAACTTCCATGTGTTCAGCTATCCAGAGGCTCTCTaGACCCTGTCCTTTTGGGTTTTTATGGTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: RNFHVFSYPEAL*TLSFWVFMVAS
Trigger: TGAAGCCACCATAAAAACCCAAAAGGACAGGGTTCAGAGAGCCTCTGGATAGCTGAACACATGGAAGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469925.1
CDS GCA 72 bp TCCAGACCTAGATCCAGAGCAAACCATGCTTCCTGCTaGTCAGAGCATCCAATCAGCACAGAATCTTCTATT +
Preference number: 6 (lower is better)
Translates to: SRPRSRANHASC*SEHPISTESSI
Trigger: AATAGAAGATTCTGTGCTGATTGGATGCTCTGAGCAGCAGGAAGCATGGTTTGCTCTGGATCTAGGTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4
CDS GCA 72 bp ATTCAGGACAGCCCTGTAGGCTATATCACAAAAACCTaGCAAGGCAGAATACATTCCCTTGGGAAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: IQDSPVGYITKT*QGRIHSLGKGA
Trigger: AGCTCCTTTCCCAAGGGAATGTATTCTGCCTTGGCAGGTTTTTGTGATATAGCCTACAGGGCTGTCCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488223.5
ENST00000617744.4
CDS GCA 72 bp GGTCTCTTCCACACTTTCACCTATATCACAAAAACCTaGCAAGGCAGAATACATTCCCTTGGGAAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GLFHTFTYITKT*QGRIHSLGKGA
Trigger: AGCTCCTTTCCCAAGGGAATGTATTCTGCCTTGGCAGGTTTTTGTGATATAGGTGAAAGTGTGGAAGAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357321.9
ENST00000537969.5
ENST00000544879.5
CDS CCA 72 bp AGTTCACCTGGATCTGTGGATAATAGATTATATTATTaGAAGGGCACACACGCTTGCTGCCAGCCACGTTCT +
Preference number: 6 (lower is better)
Translates to: SSPGSVDNRLYY*KGTHACCQPRS
Trigger: AGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATCCACAGATCCAGGTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349051.9
CDS CCA 72 bp TCCACACTTTCACCTGTGGATAATAGATTATATTATTaGAAGGGCACACACGCTTGCTGCCAGCCACGTTCT +
Preference number: 6 (lower is better)
Translates to: STLSPVDNRLYY*KGTHACCQPRS
Trigger: AGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATCCACAGGTGAAAGTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372997.3
CDS GCA 72 bp AGAGCATCCAATCAGCACAGAATCTTCTATTCTTTGTaGATCCTGTCCAAATTTACCCAGGAGCCTTTCCAA +
Preference number: 6 (lower is better)
Translates to: RASNQHRIFYSL*ILSKFTQEPFQ
Trigger: TTGGAAAGGCTCCTGGGTAAATTTGGACAGGATGCACAAAGAATAGAAGATTCTGTGCTGATTGGATGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349051.9
ENST00000357321.9
ENST00000372997.3
ENST00000488223.5
ENST00000537969.5
ENST00000544879.5
ENST00000617744.4