Pregenerated sensors for NUDT11 (Homo sapiens)
Ensembl gene IDs: ENSG00000196368Ensembl transcript IDs: ENST00000375992.4
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCTCTCAGCCCTCTGCATTCTCATATGCAGAAACCAGGTAGGATaGGGAGCTAGCTGTGTGTACTGGAAAAGGGATGAAAACTACAGC | + |
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Preference number: 1 (lower is better) Translates to: PLSALCILICRNQVG*GASCVYWKRDENYS Trigger: GCTGTAGTTTTCATCCCTTTTCCAGTACACACAGCTAGCTCCTCATCCTACCTGGTTTCTGCATATGAGAATGCAGAGGGCTGAGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR GCA 90 bp | CAGAGCAAGAGTCAGTGGTATAGACAGGGAAGGAGTGTCCCAAGATaGAGGAAGAAACCAGATGAGCTGTCTTCTTGGGAACACAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: QSKSQWYRQGRSVPR*RKKPDELSSWEHRS Trigger: ACTTCTGTGTTCCCAAGAAGACAGCTCATCTGGTTTCTTCCTGCATCTTGGGACACTCCTTCCCTGTCTATACCACTGACTCTTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR TCA 90 bp | AGAGTTGTTACACGAAGGACTGATTCTACAAAACATTACCCTAGGTaGTGGCATAATCTTAAAACTGTGCAGCTACTGTGTGGTATGACA | + |
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Preference number: 1 (lower is better) Translates to: RVVTRRTDSTKHYPR*WHNLKTVQLLCGMT Trigger: TGTCATACCACACAGTAGCTGCACAGTTTTAAGATTATGCCATCACCTAGGGTAATGTTTTGTAGAATCAGTCCTTCGTGTAACAACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR CCA 90 bp | ATTTCAAATTATGTAACAACTGGGGACACAATCAATACATTTCACTaGTATCATGAGGAAGAGTGTCACACTAAAATGGAGTCCAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: ISNYVTTGDTINTFH*YHEEECHTKMESKL Trigger: AAGCTTGGACTCCATTTTAGTGTGACACTCTTCCTCATGATACCAGTGAAATGTATTGATTGTGTCCCCAGTTGTTACATAATTTGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGACACAATCAATACATTTCACTGGTATCATGAGGAAGAGTGTCACACTACAGGAAGAAACCAGATaGGCTGTCTTCTTGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: LGTQSIHFTGIMRKSVTLQEETR*AVFLGT Trigger: TGTTCCCAAGAAGACAGCTCATCTGGTTTCTTCCTG...TAGTGTGACACTCTTCCTCATGATACCAGTGAAATGTATTGATTGTGTCCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR CCA 90 bp | CAATTTTGCCCTCTCTCAGCCCTCTGCATTCTCATATGCAGAAACCAGGTAGGAATAGCCTGTTGGCTCTaGCATCAAATAATACAGTAT | + |
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Preference number: 2 (lower is better) Translates to: QFCPLSALCILICRNQVGIACWL*HQIIQY Trigger: ATACTGTATTATTTGATGCCAGAGCCAACAGGCTAT...TCCTACCTGGTTTCTGCATATGAGAATGCAGAGGGCTGAGAGAGGGCAAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR TCA 90 bp | TGGTATCATGAGGAAGAGTGTCACACTAAAATGGAGTCCAAGCTTTTATCGATGTTTGGAAACTGCCTATaGTATAGCCTGTTGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: WYHEEECHTKMESKLLSMFGNCL*YSLLAL Trigger: CAGAGCCAACAGGCTATATCATAGGCAGTTTCCAAA...CATCGATAAAAGCTTGGACTCCATTTTAGTGTGACACTCTTCCTCATGATACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR TCA 90 bp | TTACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCAGAAACCAGGTAGGATaGGGAGCTAGCTGTGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: LPIYGQSCFIYVLNYPTLRNQVG*GASCVY Trigger: GTACACACAGCTAGCTCCTCATCCTACCTGGTTTCT...GAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR TCA 90 bp | TGTACTGGAAAAGGGATGAAAACTACAGCCAAATGGATCAGTGAGAGAGGCAAATGTTACACGAAGGACTaGTTCTACAAAACATTACCC | + |
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Preference number: 2 (lower is better) Translates to: CTGKGMKTTAKWISERGKCYTKD*FYKTLP Trigger: GGGTAATGTTTTGTAGAATCAGTCCTTCGTGTAACA...TTTGCCTCTCTCACTGATCCATTTGGCTGTAGTTTTCATCCCTTTTCCAGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR GCA 90 bp | TGGTATCATGAGGAAGAGTGTCACACTAAAATGGAGTCCAAGCTTTTATCGATGTTGGGAACACAGAAGTaGTCACCTGTACTTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: WYHEEECHTKMESKLLSMLGTQK*SPVLDN Trigger: ATTGTCAAGTACAGGTGAGCACTTCTGTGTTCCCAA...CATCGATAAAAGCTTGGACTCCATTTTAGTGTGACACTCTTCCTCATGATACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR GCA 90 bp | ATCATCAACAGTACAAAAACACTAGAGTTGTTACACGAAGGACTGATTCTACAAAGGAGTGTCCCAAGATaGAGGAAGAAACCAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: IINSTKTLELLHEGLILQRSVPR*RKKPDE Trigger: CTCATCTGGTTTCTTCCTGCATCTTGGGACACTCCT...TTGTAGAATCAGTCCTTCGTGTAACAACTCTAGTGTTTTTGTACTGTTGATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGACTGATTCTACAAAACATTACCCTAGGTGATGGCATAATCTTAAAACTGCAAAAGCCACACACATaGTGCCTAGATAGCATATAC | + |
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Preference number: 2 (lower is better) Translates to: EGLILQNITLGDGIILKLQKPHT*CLDSIY Trigger: GTATATGCTATCTAGGCACCATGTGTGTGGCTTTTG...CAGTTTTAAGATTATGCCATCACCTAGGGTAATGTTTTGTAGAATCAGTCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR CCA 90 bp | TTAGAACCACTTTTGGTAATTTGTAAGGAGCTGAAGACTGCTGATATCACACATATGACATGTAAGAAGTaGTTAGGGCAGGCATTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LEPLLVICKELKTADITHMTCKK*LGQALQ Trigger: TTGCAATGCCTGCCCTAACCACTTCTTACATGTCAT...ATGTGTGATATCAGCAGTCTTCAGCTCCTTACAAATTACCAAAAGTGGTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR CAA 90 bp | AACATCCATCACACAGCTTCAGCAATTACCAATTTATGGCCAATCTaGTTTCATCTATGTACTCAATTACCCCACACTCAGATGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: NIHHTASAITNLWPI*FHLCTQLPHTQMIL Trigger: CAAAATCATCTGAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTAATTGCTGAAGCTGTGTGATGGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGACTGATTCTACAAAACATTACCCTAGGTGATGGCATAATCTTAAAACTGAATTCCACTGATCACTaGGTTCACATCAATGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: EGLILQNITLGDGIILKLNSTDH*VHINVS Trigger: AGAAACATTGATGTGAACCCAGTGATCAGTGGAATT...CAGTTTTAAGATTATGCCATCACCTAGGGTAATGTTTTGTAGAATCAGTCCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR CCA 90 bp | TTACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCTATGATATAGCCTGTTaGCTCTGGCATCAAATAATA | + |
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Preference number: 2 (lower is better) Translates to: LPIYGQSCFIYVLNYPTLYDIAC*LWHQII Trigger: TATTATTTGATGCCAGAGCCAACAGGCTATATCATA...GAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR CCA 90 bp | TACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCAATCAATACATTTCACTaGTATCATGAGGAAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: YQFMANLVSSMYSITPHSINTFH*YHEEEC Trigger: ACACTCTTCCTCATGATACCAGTGAAATGTATTGAT...TGAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR TCA 72 bp | GGGAAGGAGTGTCCCAAGATGCAGGAAGAAACCAGATaGGCTGTCTTCTTGGGAACACAGAAGTGCTCACCT | + |
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Preference number: 3 (lower is better) Translates to: GKECPKMQEETR*AVFLGTQKCSP Trigger: AGGTGAGCACTTCTGTGTTCCCAAGAAGACAGCTCATCTGGTTTCTTCCTGCATCTTGGGACACTCCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR TCA 72 bp | GCCCTCTGCATTCTCATATGCAGAAACCAGGTAGGATaGGGAGCTAGCTGTGTGTACTGGAAAAGGGATGAA | + |
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Preference number: 3 (lower is better) Translates to: ALCILICRNQVG*GASCVYWKRDE Trigger: TTCATCCCTTTTCCAGTACACACAGCTAGCTCCTCATCCTACCTGGTTTCTGCATATGAGAATGCAGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR CAA 90 bp | GAAGGACTGATTCTACAAAACATTACCCTAGGTGATGGCATAATCTTAAAACTGTGGAAGGGGAATGTTTaGCCACACGGTGATTACAAA | + |
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Preference number: 3 (lower is better) Translates to: EGLILQNITLGDGIILKLWKGNV*PHGDYK Trigger: TTTGTAATCACCGTGTGGCAAAACATTCCCCTTCCA...CAGTTTTAAGATTATGCCATCACCTAGGGTAATGTTTTGTAGAATCAGTCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR TCA 72 bp | ACACGAAGGACTGATTCTACAAAACATTACCCTAGGTaGTGGCATAATCTTAAAACTGTGCAGCTACTGTGT | + |
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Preference number: 3 (lower is better) Translates to: TRRTDSTKHYPR*WHNLKTVQLLC Trigger: ACACAGTAGCTGCACAGTTTTAAGATTATGCCATCACCTAGGGTAATGTTTTGTAGAATCAGTCCTTCGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR CCA 72 bp | TATGTAACAACTGGGGACACAATCAATACATTTCACTaGTATCATGAGGAAGAGTGTCACACTAAAATGGAG | + |
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Preference number: 3 (lower is better) Translates to: YVTTGDTINTFH*YHEEECHTKME Trigger: CTCCATTTTAGTGTGACACTCTTCCTCATGATACCAGTGAAATGTATTGATTGTGTCCCCAGTTGTTACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR CCA 72 bp | TTCACTGGTATCATGAGGAAGAGTGTCACACTAAAATaGAGTCCAAGCTTTTATCGATGCAATTGCTTTATA | + |
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Preference number: 3 (lower is better) Translates to: FTGIMRKSVTLK*SPSFYRCNCFI Trigger: TATAAAGCAATTGCATCGATAAAAGCTTGGACTCCATTTTAGTGTGACACTCTTCCTCATGATACCAGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR-3UTR CAA 90 bp | TTAGAACCACTTTTGGTAATTTGTAAGGAGCTGAAGACTGCTGATATCACACATACAAAAACACTAGAGTaGTTACACGAAGGACTGATT | + |
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Preference number: 3 (lower is better) Translates to: LEPLLVICKELKTADITHTKTLE*LHEGLI Trigger: AATCAGTCCTTCGTGTAACAACTCTAGTGTTTTTGT...ATGTGTGATATCAGCAGTCTTCAGCTCCTTACAAATTACCAAAAGTGGTTCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CCA 90 bp | ATAGCATATACTCTACTAGCACCAGATTGGAAGGGGAATGTTTTGCCACACGGTCCTCTCGCTGCTGTGTaGGCCGCCGCTGCCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: IAYTLLAPDWKGNVLPHGPLAAV*AAAAAA Trigger: GGCAGCGGCAGCGGCGGCCCACACAGCAGCGAGAGG...ACCGTGTGGCAAAACATTCCCCTTCCAATCTGGTGCTAGTAGAGTATATGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR TCA 90 bp | CAGAGCAAGAGTCAGTGGTATAGACAGGGAAGGAGTGTCCCAAGATGCAGGAAGAGAAACCAGGTAGGATaGGGAGCTAGCTGTGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: QSKSQWYRQGRSVPRCRKRNQVG*GASCVY Trigger: GTACACACAGCTAGCTCCTCATCCTACCTGGTTTCT...CTTCCTGCATCTTGGGACACTCCTTCCCTGTCTATACCACTGACTCTTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR GCA 90 bp | TACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCACCTCTCGCCTCTCGCTaGTGTGTGGGCCGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YQFMANLVSSMYSITPHSPLASR*CVGRRC Trigger: GCAGCGGCGGCCCACACAGCAGCGAGAGGCGAGAGG...TGAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR TCA 90 bp | CAGAGCAAGAGTCAGTGGTATAGACAGGGAAGGAGTGTCCCAAGATGCAGGAAGTTTGGAAACTGCCTATaGTATAGCCTGTTGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QSKSQWYRQGRSVPRCRKFGNCL*YSLLAL Trigger: CAGAGCCAACAGGCTATATCATAGGCAGTTTCCAAA...CTTCCTGCATCTTGGGACACTCCTTCCCTGTCTATACCACTGACTCTTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CCA 90 bp | CAGAGCAAGAGTCAGTGGTATAGACAGGGAAGGAGTGTCCCAAGATGCAGGAAGCTACTAGCACCAGATTaGAAGGGGAATGTTTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QSKSQWYRQGRSVPRCRKLLAPD*KGNVLP Trigger: TGGCAAAACATTCCCCTTCCAATCTGGTGCTAGTAG...CTTCCTGCATCTTGGGACACTCCTTCCCTGTCTATACCACTGACTCTTGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CCA 90 bp | CAGAGCAAGAGTCAGTGGTATAGACAGGGAAGGAGTGTCCCAAGATGCAGGAAGCAAAAGCCACACACATaGTGCCTAGATAGCATATAC | + |
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Preference number: 4 (lower is better) Translates to: QSKSQWYRQGRSVPRCRKQKPHT*CLDSIY Trigger: GTATATGCTATCTAGGCACCATGTGTGTGGCTTTTG...CTTCCTGCATCTTGGGACACTCCTTCCCTGTCTATACCACTGACTCTTGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR TCA 90 bp | CTGGGGACACAATCAATACATTTCACTGGTATCATGAGGAAGAGTGTCACACTAGGAGCTGAAGACTGCTaGTATCACACATCCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: LGTQSIHFTGIMRKSVTLGAEDC*YHTSHG Trigger: GCCATGGGATGTGTGATATCAGCAGTCTTCAGCTCC...TAGTGTGACACTCTTCCTCATGATACCAGTGAAATGTATTGATTGTGTCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR TCA 90 bp | ATAGCATATACTCTACTAGCACCAGATTGGAAGGGGAATGTTTTGCCACACGGTCAGGAAGAAACCAGATaGGCTGTCTTCTTGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: IAYTLLAPDWKGNVLPHGQEETR*AVFLGT Trigger: TGTTCCCAAGAAGACAGCTCATCTGGTTTCTTCCTG...ACCGTGTGGCAAAACATTCCCCTTCCAATCTGGTGCTAGTAGAGTATATGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR TCA 90 bp | CAGAGCAAGAGTCAGTGGTATAGACAGGGAAGGAGTGTCCCAAGATGCAGGAAGAATGCCTTTTCTAAATaGCAACAATTTTGCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QSKSQWYRQGRSVPRCRKNAFSK*QQFCPL Trigger: GAGAGGGCAAAATTGTTGTCATTTAGAAAAGGCATT...CTTCCTGCATCTTGGGACACTCCTTCCCTGTCTATACCACTGACTCTTGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR GCA 90 bp | ATAGCATATACTCTACTAGCACCAGATTGGAAGGGGAATGTTTTGCCACACGGTAGGAGTGTCCCAAGATaGAGGAAGAAACCAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: IAYTLLAPDWKGNVLPHGRSVPR*RKKPDE Trigger: CTCATCTGGTTTCTTCCTGCATCTTGGGACACTCCT...ACCGTGTGGCAAAACATTCCCCTTCCAATCTGGTGCTAGTAGAGTATATGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR GCA 90 bp | CAATTTTGCCCTCTCTCAGCCCTCTGCATTCTCATATGCAGAAACCAGGTAGGAAATACTGAACATCTTTaGTGTTCATTAGGGATCGCT | + |
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Preference number: 4 (lower is better) Translates to: QFCPLSALCILICRNQVGNTEHL*CSLGIA Trigger: AGCGATCCCTAATGAACAGCAAAGATGTTCAGTATT...TCCTACCTGGTTTCTGCATATGAGAATGCAGAGGGCTGAGAGAGGGCAAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR GCA 90 bp | TACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCATTGGGAACACAGAAGTaGTCACCTGTACTTGACAAT | + |
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Preference number: 4 (lower is better) Translates to: YQFMANLVSSMYSITPHSLGTQK*SPVLDN Trigger: ATTGTCAAGTACAGGTGAGCACTTCTGTGTTCCCAA...TGAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR GCA 90 bp | TACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCAGGAAGGGGAATGTTTTaGCACACGGTGATTACAAAA | + |
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Preference number: 4 (lower is better) Translates to: YQFMANLVSSMYSITPHSGRGMF*HTVITK Trigger: TTTTGTAATCACCGTGTGGCAAAACATTCCCCTTCC...TGAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR GCA 90 bp | TTACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCAAGCCACACACATGGTaGCTAGATAGCATATACTCT | + |
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Preference number: 4 (lower is better) Translates to: LPIYGQSCFIYVLNYPTLKPHTW*LDSIYS Trigger: AGAGTATATGCTATCTAGGCACCATGTGTGTGGCTT...GAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CCA 90 bp | TGGTATCATGAGGAAGAGTGTCACACTAAAATGGAGTCCAAGCTTTTATCGATGAATTCCACTGATCACTaGGTTCACATCAATGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: WYHEEECHTKMESKLLSMNSTDH*VHINVS Trigger: AGAAACATTGATGTGAACCCAGTGATCAGTGGAATT...CATCGATAAAAGCTTGGACTCCATTTTAGTGTGACACTCTTCCTCATGATACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CCA 90 bp | TACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCAATGACATGTAAGAAGTaGTTAGGGCAGGCATTGCAA | + |
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Preference number: 4 (lower is better) Translates to: YQFMANLVSSMYSITPHSMTCKK*LGQALQ Trigger: TTGCAATGCCTGCCCTAACCACTTCTTACATGTCAT...TGAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CCA 90 bp | TGGTATCATGAGGAAGAGTGTCACACTAAAATGGAGTCCAAGCTTTTATCGATGTATGATATAGCCTGTTaGCTCTGGCATCAAATAATA | + |
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Preference number: 4 (lower is better) Translates to: WYHEEECHTKMESKLLSMYDIAC*LWHQII Trigger: TATTATTTGATGCCAGAGCCAACAGGCTATATCATA...CATCGATAAAAGCTTGGACTCCATTTTAGTGTGACACTCTTCCTCATGATACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR TCA 90 bp | ATCATCAACAGTACAAAAACACTAGAGTTGTTACACGAAGGACTGATTCTACAATGTTACACGAAGGACTaGTTCTACAAAACATTACCC | + |
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Preference number: 4 (lower is better) Translates to: IINSTKTLELLHEGLILQCYTKD*FYKTLP Trigger: GGGTAATGTTTTGTAGAATCAGTCCTTCGTGTAACA...TTGTAGAATCAGTCCTTCGTGTAACAACTCTAGTGTTTTTGTACTGTTGATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CCA 90 bp | TACCAATTTATGGCCAATCTTGTTTCATCTATGTACTCAATTACCCCACACTCAAGTGTCACACTAAAATaGAGTCCAAGCTTTTATCGA | + |
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Preference number: 4 (lower is better) Translates to: YQFMANLVSSMYSITPHSSVTLK*SPSFYR Trigger: TCGATAAAAGCTTGGACTCCATTTTAGTGTGACACT...TGAGTGTGGGGTAATTGAGTACATAGATGAAACAAGATTGGCCATAAATTGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| 3UTR CAA 72 bp | TATACTCTACTAGCACCAGATTGGAAGGGGAATGTTTaGCCACACGGTGATTACAAAATATTAATTGAATCA | + |
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Preference number: 4 (lower is better) Translates to: YTLLAPDWKGNV*PHGDYKILIES Trigger: TGATTCAATTAATATTTTGTAATCACCGTGTGGCAAAACATTCCCCTTCCAATCTGGTGCTAGTAGAGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CCA 90 bp | ATCATCAACAGTACAAAAACACTAGAGTTGTTACACGAAGGACTGATTCTACAAATCAATACATTTCACTaGTATCATGAGGAAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: IINSTKTLELLHEGLILQINTFH*YHEEEC Trigger: ACACTCTTCCTCATGATACCAGTGAAATGTATTGAT...TTGTAGAATCAGTCCTTCGTGTAACAACTCTAGTGTTTTTGTACTGTTGATGAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CAA 90 bp | AGGAGTGTCCCAAGATGCAGGAAGAAACCAGATGAGCTGTCTTCTTGGGAACACTGGAAGGGGAATGTTTaGCCACACGGTGATTACAAA | + |
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Preference number: 5 (lower is better) Translates to: RSVPRCRKKPDELSSWEHWKGNV*PHGDYK Trigger: TTTGTAATCACCGTGTGGCAAAACATTCCCCTTCCA...GTGTTCCCAAGAAGACAGCTCATCTGGTTTCTTCCTGCATCTTGGGACACTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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| CDS-3UTR CAA 90 bp | CAGAGCAAGAGTCAGTGGTATAGACAGGGAAGGAGTGTCCCAAGATGCAGGAAGACAAAAACACTAGAGTaGTTACACGAAGGACTGATT | + |
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Preference number: 5 (lower is better) Translates to: QSKSQWYRQGRSVPRCRKTKTLE*LHEGLI Trigger: AATCAGTCCTTCGTGTAACAACTCTAGTGTTTTTGT...CTTCCTGCATCTTGGGACACTCCTTCCCTGTCTATACCACTGACTCTTGCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375992.4 |
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