RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106268

Ensembl transcript IDs: ENST00000339737.6, ENST00000343985.8, ENST00000356714.6, ENST00000397046.5, ENST00000397048.5, ENST00000397049.2, ENST00000454650.1, ENST00000471348.1, ENST00000487426.1

Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCATCCAGTTAATTCCAGATGAAACCCGGCTCTGCGCCACTCAATaGCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCT +
Preference number: 1 (lower is better)
Translates to: SIQLIPDETRLCATQ*PQVKMVCGCSAATS
Trigger: AGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGTTTCATCTGGAATTAACTGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
3UTR GCA 72 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTaGGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: LCATQCPQVKMV*GCSAATSPAQG
Trigger: CCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
3UTR TCA 72 bp ATGAAACCCGGCTCTGCGCCACTCAATGCCCCCAGGTaGAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTC +
Preference number: 3 (lower is better)
Translates to: MKPGSAPLNAPR*RWFAAVQQPRL
Trigger: GAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGTTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
3UTR GCA 72 bp TTAATTCCAGATGAAACCCGGCTCTGCGCCACTCAATaGCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCA +
Preference number: 3 (lower is better)
Translates to: LIPDETRLCATQ*PQVKMVCGCSA
Trigger: TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGTTTCATCTGGAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCCTCCTGCCCAGGGGCTaGCCTGGGCTCCCGCTAGAC +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAALLPRG*PGLPLD
Trigger: GTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAG...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCGCCCAGGGGCTGCCCTaGGCTCCCGCTAGACCGTGT +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAAAQGLP*APARPC
Trigger: ACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGC...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCCCAGGGGCTGCCCTaGGCTCCCGCTAGACCGTGT +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGAQGLP*APARPC
Trigger: ACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGC...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCTCCTGCCCAGGGGCTaGCCTGGGCTCCCGCTAGAC +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLLLPRG*PGLPLD
Trigger: GTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAG...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCCAGGGGCTGCCCTaGGCTCCCGCTAGACCGTGT +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGAAQGLP*APARPC
Trigger: ACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGC...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACTCCTGCCCAGGGGCTaGCCTGGGCTCCCGCTAGAC +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPLLPRG*PGLPLD
Trigger: GTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCACTCCTGCCCAGGGGCTaGCCTGGGCTCCCGCTAGAC +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSLLPRG*PGLPLD
Trigger: GTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAG...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCCGTGGAGGAAGCACGTaGCAGGGGCCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAARGGST*QGPGGR
Trigger: CCTTCCTCCTGGCCCCTGGCACGTGCTTCCTCCACG...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397049.2
CDS-3UTR CCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGCCCAGGGGCTGCCCTaGGCTCCCGCTAGACCGTGT +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHAQGLP*APARPC
Trigger: ACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGC...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCCCAGGGGCTGCCCTaGGCTCCCGCTAGACCGTGT +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSAQGLP*APARPC
Trigger: ACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGC...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCCTGGAGGCGCCCATaGTCCCTGGGTTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGAWRRP*SLGSSH
Trigger: GTGGGAAGAACCCAGGGACCATGGGCGCCTCCAGGC...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR CCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGGCCTGGAGGCGCCCATaGTCCCTGGGTTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLAWRRP*SLGSAP
Trigger: CGGTGCAGAACCCAGGGACCATGGGCGCCTCCAGGC...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356714.6
CDS-3UTR TCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTCCCAGGAGAACTCGCTaGGGCTGCAGGACCAGCACC +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGAPRRTR*GCRTST
Trigger: GGTGCTGGTCCTGCAGCCTCAGCGAGTTCTCCTGGG...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCCAGGAGAACTCGCTaGGGCTGCAGGACCAGCACC +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLPRRTR*GCRTST
Trigger: GGTGCTGGTCCTGCAGCCTCAGCGAGTTCTCCTGGG...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCAGACCGCTCTCCTCCTaGAGCTCCCTCCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAARPLSS*SSLLAP
Trigger: TGGGGCTAGGAGGGAGCTGCAGGAGGAGAGCGGTCT...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCGCCCAGGGGCTGCCCTaGGCTCCCGCTAGACCGTGT +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCAQGLP*APARPC
Trigger: ACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGC...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGGCGCCCATGGTCCCTaGGTTCTGCACCGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSAGAHGP*VLHRRF
Trigger: GAAGCGGCGGTGCAGAACCCAGGGACCATGGGCGCC...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356714.6
CDS-3UTR CCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCGCCTGGAGGCGCCCATaGTCCCTGGGTTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAAAWRRP*SLGSER
Trigger: CCTTTCAGAACCCAGGGACCATGGGCGCCTCCAGGC...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397049.2
3UTR CAA 72 bp GCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTaGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALRHSMPPGEDG*RLFSSHVSCPG
Trigger: CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACCCCAGGAGAACTCGCTaGGGCTGCAGGACCAGCACC +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHPRRTR*GCRTST
Trigger: GGTGCTGGTCCTGCAGCCTCAGCGAGTTCTCCTGGG...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCACCCAGGAGAACTCGCTaGGGCTGCAGGACCAGCACC +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSAPRRTR*GCRTST
Trigger: GGTGCTGGTCCTGCAGCCTCAGCGAGTTCTCCTGGG...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCCCCAGGAGAACTCGCTaGGGCTGCAGGACCAGCACC +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAAPRRTR*GCRTST
Trigger: GGTGCTGGTCCTGCAGCCTCAGCGAGTTCTCCTGGG...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTAGACCGCTCTCCTCCTaGAGCTCCCTCCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGARPLSS*SSLLAP
Trigger: TGGGGCTAGGAGGGAGCTGCAGGAGGAGAGCGGTCT...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGAGACCGCTCTCCTCCTaGAGCTCCCTCCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLRPLSS*SSLLAP
Trigger: TGGGGCTAGGAGGGAGCTGCAGGAGGAGAGCGGTCT...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCGAGTCAGCCATGACGTaGGTGGAGGAAGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAAESAMT*VEEARA
Trigger: GGCACGTGCTTCCTCCACGCACGTCATGGCTGACTC...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397049.2
CDS-3UTR CCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGCGCCCATGGTCCCTaGGTTTCTCCAAGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPGAHGP*VSPSRR
Trigger: ACGGCGGCTTGGAGAAACCCAGGGACCATGGGCGCC...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339737.6
ENST00000397046.5
CDS-3UTR CCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGGCGCCCATGGTCCCTaGGTTTCTCCAAGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSGAHGP*VSPSRR
Trigger: ACGGCGGCTTGGAGAAACCCAGGGACCATGGGCGCC...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339737.6
ENST00000397046.5
CDS-3UTR CCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGTCCACGGGGGTCCCCTaGATGCTGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGSTGVP*MLSVQK
Trigger: CTTCTGCACAGACAGCATCCAGGGGACCCCCGTGGA...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGGCGCCCATGGTCCCTaGGTTCTTCCCACTCCAACT +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGGAHGP*VLPTPT
Trigger: AGTTGGAGTGGGAAGAACCCAGGGACCATGGGCGCC...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR CCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGCCTGGAGGCGCCCATaGTCCCTGGGTTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPAWRRP*SLGSSH
Trigger: GTGGGAAGAACCCAGGGACCATGGGCGCCTCCAGGC...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR TCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTAGACATGCACGTCCATaGGCTCAGGCTCGCCCACGA +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGARHARP*AQARPR
Trigger: TCGTGGGCGAGCCTGAGCTCATGGACGTGCATGTCT...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACAGACCGCTCTCCTCCTaGAGCTCCCTCCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHRPLSS*SSLLAP
Trigger: TGGGGCTAGGAGGGAGCTGCAGGAGGAGAGCGGTCT...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCAGACCGCTCTCCTCCTaGAGCTCCCTCCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAARPLSS*SSLLAP
Trigger: TGGGGCTAGGAGGGAGCTGCAGGAGGAGAGCGGTCT...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGCGGGGGTCCCCTGGATaGTGTCTGTGCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGRGSPG*CLCRRH
Trigger: ATGTCTTCTGCACAGACAGCATCCAGGGGACCCCCG...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGGATGAAACCCGGCTCTaGGCCACTCAATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLDETRL*ATQCPQ
Trigger: CTGGGGGCATTGAGTGGCGCAGAGCCGGGTTTCATC...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGATGAAACCCGGCTCTaGGCCACTCAATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGADETRL*ATQCPQ
Trigger: CTGGGGGCATTGAGTGGCGCAGAGCCGGGTTTCATC...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGCCTGGAGGCGCCCATaGTCCCTGGGTTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPAWRRP*SLGFSK
Trigger: CTTGGAGAAACCCAGGGACCATGGGCGCCTCCAGGC...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339737.6
ENST00000397046.5
CDS-3UTR CCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTTCCACGGGGGTCCCCTaGATGCTGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGASTGVP*MLSVQK
Trigger: CTTCTGCACAGACAGCATCCAGGGGACCCCCGTGGA...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGTCCACGGGGGTCCCCTaGATGCTGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLSTGVP*MLSVQK
Trigger: CTTCTGCACAGACAGCATCCAGGGGACCCCCGTGGA...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACAGACATGCACGTCCATaGGCTCAGGCTCGCCCACGA +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHRHARP*AQARPR
Trigger: TCGTGGGCGAGCCTGAGCTCATGGACGTGCATGTCT...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAAGACATGCACGTCCATaGGCTCAGGCTCGCCCACGA +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPRHARP*AQARPR
Trigger: TCGTGGGCGAGCCTGAGCTCATGGACGTGCATGTCT...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAAGACATGCACGTCCATaGGCTCAGGCTCGCCCACGA +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSARHARP*AQARPR
Trigger: TCGTGGGCGAGCCTGAGCTCATGGACGTGCATGTCT...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCCTCAATGCCCCCAGGTaGAGATGGTTTGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAALNAPR*RWFAAV
Trigger: AACAGCCGCAAACCATCTTCACCTGGGGGCATTGAG...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGCTCAATGCCCCCAGGTaGAGATGGTTTGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGLNAPR*RWFAAV
Trigger: AACAGCCGCAAACCATCTTCACCTGGGGGCATTGAG...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCCCAGTTAATTCCAGATaGAACCCGGCTCTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAAPVNSR*NPALRH
Trigger: GTGGCGCAGAGCCGGGTTTCATCTGGAATTAACTGG...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGCCAGTTAATTCCAGATaGAACCCGGCTCTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGPVNSR*NPALRH
Trigger: GTGGCGCAGAGCCGGGTTTCATCTGGAATTAACTGG...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCGGGCAGAGTCAGCCATaGCGTGCGTGGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCGQSQP*RAWRKH
Trigger: GTGCTTCCTCCACGCACGTCATGGCTGACTCTGCCC...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397049.2
CDS-3UTR GCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCGGGGGTCCCCTGGATaGTGTCTGTGCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLRGSPG*CLCRRH
Trigger: ATGTCTTCTGCACAGACAGCATCCAGGGGACCCCCG...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTCGGGGGTCCCCTGGATaGTGTCTGTGCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGARGSPG*CLCRRH
Trigger: ATGTCTTCTGCACAGACAGCATCCAGGGGACCCCCG...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGCTCTGCGCCACTCAATaGCCCCAGGTGAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGLCATQ*PQVKMV
Trigger: AACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCCTCTGCGCCACTCAATaGCCCCAGGTGAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAALCATQ*PQVKMV
Trigger: AACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGATGAAACCCGGCTCTaGGCCACTCAATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSDETRL*ATQCPQ
Trigger: CTGGGGGCATTGAGTGGCGCAGAGCCGGGTTTCATC...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCGATGAAACCCGGCTCTaGGCCACTCAATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAADETRL*ATQCPQ
Trigger: CTGGGGGCATTGAGTGGCGCAGAGCCGGGTTTCATC...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCGCCTGGAGGCGCCCATaGTCCCTGGGTTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCAWRRP*SLGFSK
Trigger: CTTGGAGAAACCCAGGGACCATGGGCGCCTCCAGGC...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339737.6
ENST00000397046.5
CDS-3UTR CCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCTCCACGGGGGTCCCCTaGATGCTGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAASTGVP*MLSVQK
Trigger: CTTCTGCACAGACAGCATCCAGGGGACCCCCGTGGA...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCATCCACGGGGGTCCCCTaGATGCTGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSASTGVP*MLSVQK
Trigger: CTTCTGCACAGACAGCATCCAGGGGACCCCCGTGGA...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACTCCACGGGGGTCCCCTaGATGCTGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHSTGVP*MLSVQK
Trigger: CTTCTGCACAGACAGCATCCAGGGGACCCCCGTGGA...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTCAGCTGGAACCAGCATaGGCGCATTTCGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGAQLEPA*AHFVAL
Trigger: GAGAGCGACGAAATGCGCCCATGCTGGTTCCAGCTG...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCAGCTGGAACCAGCATaGGCGCATTTCGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLQLEPA*AHFVAL
Trigger: GAGAGCGACGAAATGCGCCCATGCTGGTTCCAGCTG...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCTCCAGGATGGTGTCCTaGCCCTGGAACTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAASRMVS*PWNLKY
Trigger: GTACTTCAAGTTCCAGGGTCAGGACACCATCCTGGA...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCAGTTAATTCCAGATaGAACCCGGCTCTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLPVNSR*NPALRH
Trigger: GTGGCGCAGAGCCGGGTTTCATCTGGAATTAACTGG...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGAGCCTCGCTTTTTCATaGCCAGGAGAACTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGSLAFS*PGELAE
Trigger: CTCAGCGAGTTCTCCTGGGCATGAAAAAGCGAGGCT...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGTCTGTGCAGAAGACATaGACGTCCATGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGSVQKT*TSMSSG
Trigger: GCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGA...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACGGGGGTCCCCTGGATaGTGTCTGTGCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPRGSPG*CLCRRH
Trigger: ATGTCTTCTGCACAGACAGCATCCAGGGGACCCCCG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCTCTGCGCCACTCAATaGCCCCAGGTGAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLLCATQ*PQVKMV
Trigger: AACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCACAGCTGGAACCAGCATaGGCGCATTTCGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSAQLEPA*AHFVAL
Trigger: GAGAGCGACGAAATGCGCCCATGCTGGTTCCAGCTG...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCCAGCTGGAACCAGCATaGGCGCATTTCGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAAQLEPA*AHFVAL
Trigger: GAGAGCGACGAAATGCGCCCATGCTGGTTCCAGCTG...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACAGCTGGAACCAGCATaGGCGCATTTCGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPQLEPA*AHFVAL
Trigger: GAGAGCGACGAAATGCGCCCATGCTGGTTCCAGCTG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCACAGCTGGAACCAGCATaGGCGCATTTCGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSQLEPA*AHFVAL
Trigger: GAGAGCGACGAAATGCGCCCATGCTGGTTCCAGCTG...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACTCCAACTGCCTTCTaGCTCCCCCATCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAATPTAF*LPHLLR
Trigger: CCTCAGCAGATGGGGGAGCCAGAAGGCAGTTGGAGT...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR CCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCGGCGCCCATGGTCCCTaGGTTCTTCCCACTCCAACT +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCGAHGP*VLPTPT
Trigger: AGTTGGAGTGGGAAGAACCCAGGGACCATGGGCGCC...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR CCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAAGAAACCACGACTCCTaGAATCCCCGCGCGCGCTTT +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSRNHDS*NPRARF
Trigger: AAAGCGCGCGCGGGGATTCCAGGAGTCGTGGTTTCT...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397046.5
ENST00000397048.5
CDS-3UTR CCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCAGAAACCACGACTCCTaGAATCCCCGCGCGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAARNHDS*NPRARF
Trigger: AAAGCGCGCGCGGGGATTCCAGGAGTCGTGGTTTCT...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397046.5
ENST00000397048.5
CDS-3UTR TCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGTCCTTGAAGGGGATCTaGTCCAGCTGGAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLSLKGI*SSWNQH
Trigger: ATGCTGGTTCCAGCTGGATCAGATCCCCTTCAAGGA...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTTCCTTGAAGGGGATCTaGTCCAGCTGGAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGASLKGI*SSWNQH
Trigger: ATGCTGGTTCCAGCTGGATCAGATCCCCTTCAAGGA...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGCCTGACCCTGGAACTTaGAGTACCCGTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGPDPGT*STRGIS
Trigger: AGAAATTCCACGGGTACTTCAAGTTCCAGGGTCAGG...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCCCTGACCCTGGAACTTaGAGTACCCGTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAAPDPGT*STRGIS
Trigger: AGAAATTCCACGGGTACTTCAAGTTCCAGGGTCAGG...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTTCCAGGATGGTGTCCTaGCCCTGGAACTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGASRMVS*PWNLKY
Trigger: GTACTTCAAGTTCCAGGGTCAGGACACCATCCTGGA...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCACTCAATGCCCCCAGGTaGAGATGGTTTGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSALNAPR*RWFAAV
Trigger: AACAGCCGCAAACCATCTTCACCTGGGGGCATTGAG...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACCTCAATGCCCCCAGGTaGAGATGGTTTGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHLNAPR*RWFAAV
Trigger: AACAGCCGCAAACCATCTTCACCTGGGGGCATTGAG...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACCAGTTAATTCCAGATaGAACCCGGCTCTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPPVNSR*NPALRH
Trigger: GTGGCGCAGAGCCGGGTTTCATCTGGAATTAACTGG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCCCAGTTAATTCCAGATaGAACCCGGCTCTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAAPVNSR*NPALRH
Trigger: GTGGCGCAGAGCCGGGTTTCATCTGGAATTAACTGG...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGCTCCCCCATCTGCTaGGGGCTAATTCCACTCATA +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPGSPIC*GLIPLI
Trigger: TATGAGTGGAATTAGCCCTCAGCAGATGGGGGAGCC...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR GCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTAGCCTCGCTTTTTCATaGCCAGGAGAACTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGASLAFS*PGELAE
Trigger: CTCAGCGAGTTCTCCTGGGCATGAAAAAGCGAGGCT...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTCTCCTTCTTGCACTTTaGCCCCAAAGCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGALLLAL*PQSHST
Trigger: GGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAG...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGATGGTCTCTCCTTCTTaGACTTTGCCCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGMVSPS*TLPPKP
Trigger: TGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCAT...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCATGGTCTCTCCTTCTTaGACTTTGCCCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAAMVSPS*TLPPKP
Trigger: TGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCAT...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGTCTGTGCAGAAGACATaGACGTCCATGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLSVQKT*TSMSSG
Trigger: GCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGA...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCGGGGGTCCCCTGGATaGTGTCTGTGCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCRGSPG*CLCRRH
Trigger: ATGTCTTCTGCACAGACAGCATCCAGGGGACCCCCG...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACCAGGTGAAGATGGTTTaGGGCTGTTCAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHQVKMV*GCSAAT
Trigger: CGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCACAGGTGAAGATGGTTTaGGGCTGTTCAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSAQVKMV*GCSAAT
Trigger: CGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACAGGTGAAGATGGTTTaGGGCTGTTCAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPQVKMV*GCSAAT
Trigger: CGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCCAGGTGAAGATGGTTTaGGGCTGTTCAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAAQVKMV*GCSAAT
Trigger: CGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCACAGGTGAAGATGGTTTaGGGCTGTTCAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSQVKMV*GCSAAT
Trigger: CGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCACTCTGCGCCACTCAATaGCCCCAGGTGAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSLCATQ*PQVKMV
Trigger: AACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACTCTGCGCCACTCAATaGCCCCAGGTGAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPLCATQ*PQVKMV
Trigger: AACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCTCTTCCCACTCCAACTaGCTTCTGGCTCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAASSHSN*LLAPPS
Trigger: AGATGGGGGAGCCAGAAGGCAGTTGGAGTGGGAAGA...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR GCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCATCTTCCCACTCCAACTaGCTTCTGGCTCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPSSHSN*LLAPPS
Trigger: AGATGGGGGAGCCAGAAGGCAGTTGGAGTGGGAAGA...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR CCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCACTCCAACTGCCTTCTaGCTCCCCCATCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCTPTAF*LPHLLR
Trigger: CCTCAGCAGATGGGGGAGCCAGAAGGCAGTTGGAGT...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR TCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCTCCTTGAAGGGGATCTaGTCCAGCTGGAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAASLKGI*SSWNQH
Trigger: ATGCTGGTTCCAGCTGGATCAGATCCCCTTCAAGGA...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCATCCTTGAAGGGGATCTaGTCCAGCTGGAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPSLKGI*SSWNQH
Trigger: ATGCTGGTTCCAGCTGGATCAGATCCCCTTCAAGGA...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCATCCTTGAAGGGGATCTaGTCCAGCTGGAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSSLKGI*SSWNQH
Trigger: ATGCTGGTTCCAGCTGGATCAGATCCCCTTCAAGGA...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCTGACCCTGGAACTTaGAGTACCCGTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: QVKMVCGCSAATSPAQGLPDPGT*STRGIS
Trigger: AGAAATTCCACGGGTACTTCAAGTTCCAGGGTCAGG...CAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTCCTGACCCTGGAACTTaGAGTACCCGTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGAPDPGT*STRGIS
Trigger: AGAAATTCCACGGGTACTTCAAGTTCCAGGGTCAGG...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACTCCAGGATGGTGTCCTaGCCCTGGAACTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHSRMVS*PWNLKY
Trigger: GTACTTCAAGTTCCAGGGTCAGGACACCATCCTGGA...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCATCCAGGATGGTGTCCTaGCCCTGGAACTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPSRMVS*PWNLKY
Trigger: GTACTTCAAGTTCCAGGGTCAGGACACCATCCTGGA...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCTCCAGGATGGTGTCCTaGCCCTGGAACTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAASRMVS*PWNLKY
Trigger: GTACTTCAAGTTCCAGGGTCAGGACACCATCCTGGA...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCTCAATGCCCCCAGGTaGAGATGGTTTGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCLNAPR*RWFAAV
Trigger: AACAGCCGCAAACCATCTTCACCTGGGGGCATTGAG...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAAGCCTCGCTTTTTCATaGCCAGGAGAACTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSSLAFS*PGELAE
Trigger: CTCAGCGAGTTCTCCTGGGCATGAAAAAGCGAGGCT...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCACTCCTTCTTGCACTTTaGCCCCAAAGCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSALLLAL*PQSHST
Trigger: GGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAG...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCATCTGTGCAGAAGACATaGACGTCCATGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSASVQKT*TSMSSG
Trigger: GCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGA...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCATCTGTGCAGAAGACATaGACGTCCATGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSSVQKT*TSMSSG
Trigger: GCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGA...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCAGGTGAAGATGGTTTaGGGCTGTTCAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCQVKMV*GCSAAT
Trigger: CGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTG...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCAACTCAAACACGATCTaGCCCACCTTGTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCNSNTI*PTLCRA
Trigger: CGCCCTGCACAAGGTGGGCCAGATCGTGTTTGAGTT...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTCTTCTGAAGCAGGAGTaGAAACCAGTAGCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGALLKQE*KPVAVV
Trigger: GACGACAGCTACTGGTTTCCACTCCTGCTTCAGAAG...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGTGGAATTTCTTCTTCTaGAGCAGGAGTGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGWNFFF*SRSGNQ
Trigger: CTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCA...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACCTGACCCTGGAACTTaGAGTACCCGTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPPDPGT*STRGIS
Trigger: AGAAATTCCACGGGTACTTCAAGTTCCAGGGTCAGG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCTCCAGGATGGTGTCCTaGCCCTGGAACTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCSRMVS*PWNLKY
Trigger: GTACTTCAAGTTCCAGGGTCAGGACACCATCCTGGA...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAATGGTCTCTCCTTCTTaGACTTTGCCCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSAMVSPS*TLPPKP
Trigger: TGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCAT...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAATGGTCTCTCCTTCTTaGACTTTGCCCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSMVSPS*TLPPKP
Trigger: TGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCAT...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAATGGTCTCTCCTTCTTaGACTTTGCCCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPMVSPS*TLPPKP
Trigger: TGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCAT...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACCTTCTGAAGCAGGAGTaGAAACCAGTAGCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHLLKQE*KPVAVV
Trigger: GACGACAGCTACTGGTTTCCACTCCTGCTTCAGAAG...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CCA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACTTCTGAAGCAGGAGTaGAAACCAGTAGCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPLLKQE*KPVAVV
Trigger: GACGACAGCTACTGGTTTCCACTCCTGCTTCAGAAG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTTGGAATTTCTTCTTCTaGAGCAGGAGTGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGAWNFFF*SRSGNQ
Trigger: CTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCA...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCTGACCCTGGAACTTaGAGTACCCGTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCPDPGT*STRGIS
Trigger: AGAAATTCCACGGGTACTTCAAGTTCCAGGGTCAGG...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR GCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCATGGTCTCTCCTTCTTaGACTTTGCCCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCMVSPS*TLPPKP
Trigger: TGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCAT...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCATGGAATTTCTTCTTCTaGAGCAGGAGTGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: RLCATQCPQVKMVCGCSAWNFFF*SRSGNQ
Trigger: CTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCA...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCATGGAATTTCTTCTTCTaGAGCAGGAGTGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSWNFFF*SRSGNQ
Trigger: CTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCA...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCTGGAATTTCTTCTTCTaGAGCAGGAGTGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: LCATQCPQVKMVCGCSAAWNFFF*SRSGNQ
Trigger: CTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCA...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR TCA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCTGGAATTTCTTCTTCTaGAGCAGGAGTGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCWNFFF*SRSGNQ
Trigger: CTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCA...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS GCA 90 bp AGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTaGCCTGGGCTCCCGCTAGACCGTGTCCACCTCGCGGAGTGTGTA +
Preference number: 5 (lower is better)
Translates to: RWFAAVQQPRLLPRG*PGLPLDRVHLAECV
Trigger: TACACACTCCGCGAGGTGGACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS-3UTR CAA 90 bp CCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGACGATCTGGCCCACCTaGTGCAGGGCGTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: PPGEDGLRLFSSHVSCPGTIWPT*CRASTV
Trigger: GACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGT...CCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CAA 90 bp GGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTGCCACGATCTGGCCCACCTaGTGCAGGGCGTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: GEDGLRLFSSHVSCPGAATIWPT*CRASTV
Trigger: GACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGT...GGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS GCA 90 bp AGCTCAGGCTCGCCCACGAACTCAAACACGATCTGGCCCACCTTGTaGAGGGCGTCCACTGTCAGACCGCTCTCCTCCTGCAGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SSGSPTNSNTIWPTL*RASTVRPLSSCSSL
Trigger: GAGGGAGCTGCAGGAGGAGAGCGGTCTGACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGTGTTTGAGTTCGTGGGCGAGCCTGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS GCA 90 bp AGCTCAGGCTCGCCCACGAACTCAAACACGATCTGGCCCACCTTGTaGAGGGCGTCCACTGTCAGACCGCTCTCCTCCTGCAGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SSGSPTNSNTIWPTL*RASTVRPLSSCSSL
Trigger: CAGGGAGCTGCAGGAGGAGAGCGGTCTGACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGTGTTTGAGTTCGTGGGCGAGCCTGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS-3UTR CAA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTACGATCTGGCCCACCTaGTGCAGGGCGTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGATIWPT*CRASTV
Trigger: GACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGT...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS TCA 90 bp TGGTGGGAGGAACGCAGTTCTAGCCCAGTGCCCTCTGTGTACCAGTaGCAGCCCAGGCCCAGTGGAGTCCAGCCACTTGTCCACCGTCTC +
Preference number: 5 (lower is better)
Translates to: WWEERSSSPVPSVYQ*QPRPSGVQPLVHRL
Trigger: GAGACGGTGGACAAGTGGCTGGACTCCACTGGGCCTGGGCTGTCACTGGTACACAGAGGGCACTGGGCTAGAACTGCGTTCCTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS GCA 90 bp TCATTCCCGGTTACTTGCTTTTCCGCGGCTGAGCATCAGAGCCCATaGAGCGGTAGTTACGACCGCCGGGGCCCTGGGACGCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SFPVTCFSAAEHQSP*SGSYDRRGPGTLAL
Trigger: CAGAGCAAGCGTCCCAGGGCCCCGGCGGTCGTAACTACCGCTGCATGGGCTCTGATGCTCAGCCGCGGAAAAGCAAGTAACCGGGAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS GCA 90 bp AGATGGTGTGGAGCCTCTGGTGGGAGGAACGCAGTTCTAGCCCAGTaGCCTCTGTGTACCAGTGACAGCCCAGGCCCAGTGGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RWCGASGGRNAVLAQ*PLCTSDSPGPVESS
Trigger: GCTGGACTCCACTGGGCCTGGGCTGTCACTGGTACACAGAGGGCACTGGGCTAGAACTGCGTTCCTCCCACCAGAGGCTCCACACCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS CCA 90 bp GAGGCTGCAGGACCAGCACCAGGGTATAGAGCCTGGAGGCGCCCATaGTCCCTGGGTTTCTCCAAGCCGCCGTGTGATCTGATTGCTCCA +
Preference number: 5 (lower is better)
Translates to: EAAGPAPGYRAWRRP*SLGFSKPPCDLIAP
Trigger: TGGAGCAATCAGATCACACGGCGGCTTGGAGAAACCCAGGGACCATGGGCGCCTCCAGGCTCTATACCCTGGTGCTGGTCCTGCAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339737.6
ENST00000397046.5
ENST00000454650.1
CDS CCA 90 bp TGCACGTCCATGAGCTCAGGCTCGCCCACGAACTCAAACACGATCTaGCCCACCTTGTGCAGGGCGTCCACTGTCAGACCGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CTSMSSGSPTNSNTI*PTLCRASTVRPLSS
Trigger: GGAGGAGAGCGGTCTGACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGTGTTTGAGTTCGTGGGCGAGCCTGAGCTCATGGACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS CCA 90 bp CCGGGGCCCTGGGACGCTTGCTCTGGGAACCTGGGCCCTATACTCTaGGCCTGTCTGCCCAAAGAAATGTCTTTCCAGCCTGGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: PGPWDACSGNLGPIL*ACLPKEMSFQPGAS
Trigger: AGAGGCACCAGGCTGGAAAGACATTTCTTTGGGCAGACAGGCCCAGAGTATAGGGCCCAGGTTCCCAGAGCAAGCGTCCCAGGGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS CCA 90 bp CATGCAGCGGTAGTTACGACCGCCGGGGCCCTGGGACGCTTGCTCTaGGAACCTGGGCCCTATACTCTGGGCCTGTCTGCCCAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: HAAVVTTAGALGRLL*EPGPYTLGLSAQRN
Trigger: ATTTCTTTGGGCAGACAGGCCCAGAGTATAGGGCCCAGGTTCCCAGAGCAAGCGTCCCAGGGCCCCGGCGGTCGTAACTACCGCTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS-3UTR CAA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAACGATCTGGCCCACCTaGTGCAGGGCGTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPTIWPT*CRASTV
Trigger: GACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGT...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CAA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACACGATCTGGCCCACCTaGTGCAGGGCGTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHTIWPT*CRASTV
Trigger: GACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGT...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS TCA 90 bp CGGGGGTCCCCTGGATGCTGTCTGTGCAGAAGACATGCACGTCCATaGGCTCAGGCTCGCCCACGAACTCAAACACGATCTGGCCCACCT +
Preference number: 5 (lower is better)
Translates to: RGSPGCCLCRRHARP*AQARPRTQTRSGPP
Trigger: AGGTGGGCCAGATCGTGTTTGAGTTCGTGGGCGAGCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGACAGCATCCAGGGGACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS TCA 90 bp ATAGAGCCTGGAGGCGCCCATGGTCCCTGGGTTCTGAAAGGAAGGTaGGAGGGCAGAGTCAGCCATGACGTGCGTGGAGGAAGCACGTGC +
Preference number: 5 (lower is better)
Translates to: IEPGGAHGPWVLKGR*EGRVSHDVRGGSTC
Trigger: GCACGTGCTTCCTCCACGCACGTCATGGCTGACTCTGCCCTCTCACCTTCCTTTCAGAACCCAGGGACCATGGGCGCCTCCAGGCTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397049.2
CDS TCA 90 bp CCACTTGTCCACCGTCTCGAGACCCGCACGTGGCAGGGTTGGGACTaGCCCCACTTCCTTCATTCCCGGTTACTTGCTTTTCCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PLVHRLETRTWQGWD*PHFLHSRLLAFPRL
Trigger: CAGCCGCGGAAAAGCAAGTAACCGGGAATGAAGGAAGTGGGGTCAGTCCCAACCCTGCCACGTGCGGGTCTCGAGACGGTGGACAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS CCA 90 bp TGGAACCAGCATGGGCGCATTTCGTCGCTCTCCACGGGGGTCCCCTaGATGCTGTCTGTGCAGAAGACATGCACGTCCATGAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: WNQHGRISSLSTGVP*MLSVQKTCTSMSSG
Trigger: GCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGACAGCATCCAGGGGACCCCCGTGGAGAGCGACGAAATGCGCCCATGCTGGTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS CCA 90 bp GGTAGTTACGACCGCCGGGGCCCTGGGACGCTTGCTCTGGGAACCTaGGCCCTATACTCTGGGCCTGTCTGCCCAAAGAAATGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: GSYDRRGPGTLALGT*ALYSGPVCPKKCLS
Trigger: GGAAAGACATTTCTTTGGGCAGACAGGCCCAGAGTATAGGGCCCAGGTTCCCAGAGCAAGCGTCCCAGGGCCCCGGCGGTCGTAACTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS-3UTR CAA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTCCAGGTGAAGATGGTTaGCGGCTGTTCAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGAPGEDG*RLFSSH
Trigger: GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CAA 90 bp ATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCACCAGGTGAAGATGGTTaGCGGCTGTTCAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: MPPGEDGLRLFSSHVSCPPGEDG*RLFSSH
Trigger: GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG...TGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CAA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACCCAGGTGAAGATGGTTaGCGGCTGTTCAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHPGEDG*RLFSSH
Trigger: GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CAA 90 bp CCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTTCTCCTTCTTGCACTTaGCCCCCAAAGCCATTCCAC +
Preference number: 5 (lower is better)
Translates to: PGEDGLRLFSSHVSCPGASPSCT*PPKPFH
Trigger: GTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGA...AGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS GCA 90 bp GTGGCAGGGTTGGGACTGACCCCACTTCCTTCATTCCCGGTTACTTaGTTTTCCGCGGCTGAGCATCAGAGCCCATGCAGCGGTAGTTAC +
Preference number: 5 (lower is better)
Translates to: VAGLGLTPLPSFPVT*FSAAEHQSPCSGSY
Trigger: GTAACTACCGCTGCATGGGCTCTGATGCTCAGCCGCGGAAAAGCAAGTAACCGGGAATGAAGGAAGTGGGGTCAGTCCCAACCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS-3UTR CAA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCATCTCCTTCTTGCACTTaGCCCCCAAAGCCATTCCAC +
Preference number: 5 (lower is better)
Translates to: RLCATQCPQVKMVCGCSASPSCT*PPKPFH
Trigger: GTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGA...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CAA 90 bp CTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCTCTCCTTCTTGCACTTaGCCCCCAAAGCCATTCCAC +
Preference number: 5 (lower is better)
Translates to: LCATQCPQVKMVCGCSAASPSCT*PPKPFH
Trigger: GTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGA...GGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CAA 90 bp CTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACTCTCCTTCTTGCACTTaGCCCCCAAAGCCATTCCAC +
Preference number: 5 (lower is better)
Translates to: LRHSMPPGEDGLRLFSSHSPSCT*PPKPFH
Trigger: GTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGA...GTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS TCA 90 bp GAAGCAGGAGTGGAAACCAGTAGCTGTCGTCGGGCCACATGTCCTTaGAGGGGATCTGATCCAGCTGGAACCAGCATGGGCGCATTTCGT +
Preference number: 5 (lower is better)
Translates to: EAGVETSSCRRATCP*RGSDPAGTSMGAFR
Trigger: ACGAAATGCGCCCATGCTGGTTCCAGCTGGATCAGATCCCCTTCAAGGACATGTGGCCCGACGACAGCTACTGGTTTCCACTCCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS TCA 90 bp GGAGGCGCCCATGGTCCCTGGGTTTCTCCAAGCCGCCGTGTGATCTaGTTGCTCCAGTACATCAAGGCAAGAAACCACGACTCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: GGAHGPWVSPSRRVI*LLQYIKARNHDSWN
Trigger: ATTCCAGGAGTCGTGGTTTCTTGCCTTGATGTACTGGAGCAATCAGATCACACGGCGGCTTGGAGAAACCCAGGGACCATGGGCGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397046.5
CDS TCA 90 bp TCTGTATGTTCCCCTAGAGGCTTGAGAAGCGGGGCACTGAAGAAGTaGGCCACATCCTCATCGCACGCCCTTCGAGGAGGACAAGGGAAC +
Preference number: 5 (lower is better)
Translates to: SVCSPRGLRSGALKK*ATSSSHALRGGQGN
Trigger: GTTCCCTTGTCCTCCTCGAAGGGCGTGCGATGAGGATGTGGCTCACTTCTTCAGTGCCCCGCTTCTCAAGCCTCTAGGGGAACATACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS CCA 90 bp ACTGAGACTGGGTCCTGGTGGCGGAGGCAGGTCAGACAGGGTAAATaGGTTTGTGGCTTAGTTTCACACCAGGCCCGTGTACTTTGTCCC +
Preference number: 5 (lower is better)
Translates to: TETGSWWRRQVRQGK*VCGLVSHQARVLCP
Trigger: GGGACAAAGTACACGGGCCTGGTGTGAAACTAAGCCACAAACCCATTTACCCTGTCTGACCTGCCTCCGCCACCAGGACCCAGTCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS-3UTR CAA 90 bp TCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCAGCCACGTCTCCTGCTCTCCTTCTTGCACTTaGCCCCCAAAGCCATTCCAC +
Preference number: 5 (lower is better)
Translates to: SMPPGEDGLRLFSSHVSCSPSCT*PPKPFH
Trigger: GTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGA...GCAGGAGACGTGGCTGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS-3UTR CAA 90 bp CGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCAGCATCCACTCATAAAACCTaGCACTCACTCTCCAAGCCG +
Preference number: 5 (lower is better)
Translates to: RLCATQCPQVKMVCGCSASTHKT*HSLSKP
Trigger: CGGCTTGGAGAGTGAGTGCAAGGTTTTATGAGTGGA...TGCTGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS-3UTR CAA 90 bp ACCCGGCTCTGCGCCACTCAATGCCCCCAGGTGAAGATGGTTTGCGGCTGTTCATCCACTCATAAAACCTaGCACTCACTCTCCAAGCCG +
Preference number: 5 (lower is better)
Translates to: TRLCATQCPQVKMVCGCSSTHKT*HSLSKP
Trigger: CGGCTTGGAGAGTGAGTGCAAGGTTTTATGAGTGGA...TGAACAGCCGCAAACCATCTTCACCTGGGGGCATTGAGTGGCGCAGAGCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS TCA 90 bp GGAGGCGCCCATGGTCCCTGGGTTTCTCCAAGCCGCCGTGTGATCTaGTTGCTCCAGTACATCAAGGCAAGAAACCTAGGGATACAGAAA +
Preference number: 5 (lower is better)
Translates to: GGAHGPWVSPSRRVI*LLQYIKARNLGIQK
Trigger: TTTCTGTATCCCTAGGTTTCTTGCCTTGATGTACTGGAGCAATCAGATCACACGGCGGCTTGGAGAAACCCAGGGACCATGGGCGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339737.6
ENST00000454650.1
CDS GCA 90 bp GCCACCTACAAGGCTAAACTGAAAGAGCACCCTCTAACACATGCCTaGTGGGGCTTCAGGAGCTGCAAACATTCACCCCTAGACACTGCC +
Preference number: 5 (lower is better)
Translates to: ATYKAKLKEHPLTHA*WGFRSCKHSPLDTA
Trigger: GGCAGTGTCTAGGGGTGAATGTTTGCAGCTCCTGAAGCCCCAGCAGGCATGTGTTAGAGGGTGCTCTTTCAGTTTAGCCTTGTAGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS TCA 90 bp CCTCGCGGAGTGTGTAGTCCAGGATGGTGTCCTGACCCTGGAACTTaGAGTACCCGTGGAATTTCTTCTTCTGAAGCAGGAGTGGAAACC +
Preference number: 5 (lower is better)
Translates to: PRGVCSPGWCPDPGT*STRGISSSEAGVET
Trigger: GGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCACGGGTACTTCAAGTTCCAGGGTCAGGACACCATCCTGGACTACACACTCCGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS CCA 90 bp CTGGAACTTGAAGTACCCGTGGAATTTCTTCTTCTGAAGCAGGAGTaGAAACCAGTAGCTGTCGTCGGGCCACATGTCCTTGAAGGGGAT +
Preference number: 5 (lower is better)
Translates to: LELEVPVEFLLLKQE*KPVAVVGPHVLEGD
Trigger: ATCCCCTTCAAGGACATGTGGCCCGACGACAGCTACTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCACGGGTACTTCAAGTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS TCA 90 bp TTGTGGCTTAGTTTCACACCAGGCCCGTGTACTTTGTCCCGACACTaGTCTGTTTCTGCCAGAAGCCACGGTTTCCAAAGTAAATTTTTG +
Preference number: 5 (lower is better)
Translates to: LWLSFTPGPCTLSRH*SVSARSHGFQSKFL
Trigger: CAAAAATTTACTTTGGAAACCGTGGCTTCTGGCAGAAACAGATCAGTGTCGGGACAAAGTACACGGGCCTGGTGTGAAACTAAGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS GCA 72 bp GCGGCTGTTCAGCAGCCACGTCTCCTGCCCAGGGGCTaGCCTGGGCTCCCGCTAGACCGTGTCCACCTCGCG +
Preference number: 6 (lower is better)
Translates to: AAVQQPRLLPRG*PGLPLDRVHLA
Trigger: CGCGAGGTGGACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAGACGTGGCTGCTGAACAGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS CCA 72 bp GACCGCCGGGGCCCTGGGACGCTTGCTCTGGGAACCTaGGCCCTATACTCTGGGCCTGTCTGCCCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: DRRGPGTLALGT*ALYSGPVCPKK
Trigger: TTTCTTTGGGCAGACAGGCCCAGAGTATAGGGCCCAGGTTCCCAGAGCAAGCGTCCCAGGGCCCCGGCGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS CAA 72 bp ACCAGTGACAGCCCAGGCCCAGTGGAGTCCAGCCACTaGTCCACCGTCTCGAGACCCGCACGTGGCAGGGTT +
Preference number: 6 (lower is better)
Translates to: TSDSPGPVESSH*STVSRPARGRV
Trigger: AACCCTGCCACGTGCGGGTCTCGAGACGGTGGACAAGTGGCTGGACTCCACTGGGCCTGGGCTGTCACTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS GCA 72 bp CATTCCACCGGCCGGCCCCGAAGCCTCGCTTTTTCATaGCCAGGAGAACTCGCTGAGGCTGCAGGACCAGCA +
Preference number: 6 (lower is better)
Translates to: HSTGRPRSLAFS*PGELAEAAGPA
Trigger: TGCTGGTCCTGCAGCCTCAGCGAGTTCTCCTGGGCATGAAAAAGCGAGGCTTCGGGGCCGGCCGGTGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000454650.1
CDS GCA 72 bp GGAGCCTCTGGTGGGAGGAACGCAGTTCTAGCCCAGTaGCCTCTGTGTACCAGTGACAGCCCAGGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: GASGGRNAVLAQ*PLCTSDSPGPV
Trigger: CACTGGGCCTGGGCTGTCACTGGTACACAGAGGGCACTGGGCTAGAACTGCGTTCCTCCCACCAGAGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS CCA 72 bp GGACCAGCACCAGGGTATAGAGCCTGGAGGCGCCCATaGTCCCTGGGTTTCTCCAAGCCGCCGTGTGATCTG +
Preference number: 6 (lower is better)
Translates to: GPAPGYRAWRRP*SLGFSKPPCDL
Trigger: CAGATCACACGGCGGCTTGGAGAAACCCAGGGACCATGGGCGCCTCCAGGCTCTATACCCTGGTGCTGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339737.6
ENST00000397046.5
ENST00000454650.1
CDS CCA 72 bp CACCAGGGTATAGAGCCTGGAGGCGCCCATGGTCCCTaGGTTCTTCCCACTCCAACTGCCTTCTGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: HQGIEPGGAHGP*VLPTPTAFWLP
Trigger: GGGGAGCCAGAAGGCAGTTGGAGTGGGAAGAACCCAGGGACCATGGGCGCCTCCAGGCTCTATACCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS CAA 72 bp GGCTCGCCCACGAACTCAAACACGATCTGGCCCACCTaGTGCAGGGCGTCCACTGTCAGACCGCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GSPTNSNTIWPT*CRASTVRPLSS
Trigger: GGAGGAGAGCGGTCTGACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGTGTTTGAGTTCGTGGGCGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS CAA 90 bp ATGAGCTCAGGCTCGCCCACGAACTCAAACACGATCTGGCCCACCTaGTGCAGGGCGTCCACTGTCAGACCGCTCTCCTCCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: MSSGSPTNSNTIWPT*CRASTVRPLSSCSS
Trigger: GGAGCTGCAGGAGGAGAGCGGTCTGACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGTGTTTGAGTTCGTGGGCGAGCCTGAGCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS GCA 72 bp TCCCTCCTAGCCCCATCCTCGATGGTCTCTCCTTCTTaGACTTTGCCCCCAAAGCCATTCCACCGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: SLLAPSSMVSPS*TLPPKPFHRPA
Trigger: GGCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCATCGAGGATGGGGCTAGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS GCA 72 bp GGACTCCTAGCCCCATCCTCGATGGTCTCTCCTTCTTaGACTTTGCCCCCAAAGCCATTCCACCGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: GLLAPSSMVSPS*TLPPKPFHRPA
Trigger: GGCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCATCGAGGATGGGGCTAGGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471348.1
CDS CCA 72 bp GGACCAGCACCAGGGTATAGAGCCTGGAGGCGCCCATaGTCCCTGGGTTCTTCCCACTCCAACTGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: GPAPGYRAWRRP*SLGSSHSNCLL
Trigger: CAGAAGGCAGTTGGAGTGGGAAGAACCCAGGGACCATGGGCGCCTCCAGGCTCTATACCCTGGTGCTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343985.8
ENST00000397048.5
CDS CAA 72 bp CTCCCTCCTAGCCCCATCCTCGATGGTCTCTCCTTCTaGCACTTTGCCCCCAAAGCCATTCCACCGGCCGGC +
Preference number: 6 (lower is better)
Translates to: LPPSPILDGLSF*HFAPKAIPPAG
Trigger: GCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCATCGAGGATGGGGCTAGGAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
CDS CAA 72 bp GGGACTCCTAGCCCCATCCTCGATGGTCTCTCCTTCTaGCACTTTGCCCCCAAAGCCATTCCACCGGCCGGC +
Preference number: 6 (lower is better)
Translates to: GTPSPILDGLSF*HFAPKAIPPAG
Trigger: GCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCATCGAGGATGGGGCTAGGAGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471348.1
CDS CCA 72 bp ATGAGCTCAGGCTCGCCCACGAACTCAAACACGATCTaGCCCACCTTGTGCAGGGCGTCCACTGTCAGACCG +
Preference number: 6 (lower is better)
Translates to: MSSGSPTNSNTI*PTLCRASTVRP
Trigger: CGGTCTGACAGTGGACGCCCTGCACAAGGTGGGCCAGATCGTGTTTGAGTTCGTGGGCGAGCCTGAGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS CCA 72 bp CATGGGCGCATTTCGTCGCTCTCCACGGGGGTCCCCTaGATGCTGTCTGTGCAGAAGACATGCACGTCCATG +
Preference number: 6 (lower is better)
Translates to: HGRISSLSTGVP*MLSVQKTCTSM
Trigger: CATGGACGTGCATGTCTTCTGCACAGACAGCATCCAGGGGACCCCCGTGGAGAGCGACGAAATGCGCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS TCA 72 bp TCCCCTAGAGGCTTGAGAAGCGGGGCACTGAAGAAGTaGGCCACATCCTCATCGCACGCCCTTCGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: SPRGLRSGALKK*ATSSSHALRGG
Trigger: TCCTCCTCGAAGGGCGTGCGATGAGGATGTGGCTCACTTCTTCAGTGCCCCGCTTCTCAAGCCTCTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS CAA 72 bp ACTTGTCCACCGTCTCGAGACCCGCACGTGGCAGGGTaGGGACTGACCCCACTTCCTTCATTCCCGGTTACT +
Preference number: 6 (lower is better)
Translates to: TCPPSRDPHVAG*GLTPLPSFPVT
Trigger: AGTAACCGGGAATGAAGGAAGTGGGGTCAGTCCCAACCCTGCCACGTGCGGGTCTCGAGACGGTGGACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS TCA 72 bp CACCGTCTCGAGACCCGCACGTGGCAGGGTTGGGACTaGCCCCACTTCCTTCATTCCCGGTTACTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: HRLETRTWQGWD*PHFLHSRLLAF
Trigger: AAAAGCAAGTAACCGGGAATGAAGGAAGTGGGGTCAGTCCCAACCCTGCCACGTGCGGGTCTCGAGACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS CCA 72 bp GGGTCCTGGTGGCGGAGGCAGGTCAGACAGGGTAAATaGGTTTGTGGCTTAGTTTCACACCAGGCCCGTGTA +
Preference number: 6 (lower is better)
Translates to: GSWWRRQVRQGK*VCGLVSHQARV
Trigger: TACACGGGCCTGGTGTGAAACTAAGCCACAAACCCATTTACCCTGTCTGACCTGCCTCCGCCACCAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS TCA 72 bp GCGCCCATGGTCCCTGGGTTTCTCCAAGCCGCCGTGTaGTCTGATTGCTCCAGTACATCAAGGCAAGAAACC +
Preference number: 6 (lower is better)
Translates to: APMVPGFLQAAV*SDCSSTSRQET
Trigger: GGTTTCTTGCCTTGATGTACTGGAGCAATCAGATCACACGGCGGCTTGGAGAAACCCAGGGACCATGGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339737.6
ENST00000397046.5
ENST00000454650.1
CDS CCA 72 bp TGGGACGCTTGCTCTGGGAACCTGGGCCCTATACTCTaGGCCTGTCTGCCCAAAGAAATGTCTTTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: WDACSGNLGPIL*ACLPKEMSFQP
Trigger: AGGCTGGAAAGACATTTCTTTGGGCAGACAGGCCCAGAGTATAGGGCCCAGGTTCCCAGAGCAAGCGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487426.1
CDS TCA 72 bp CCTGGATGCTGTCTGTGCAGAAGACATGCACGTCCATaGGCTCAGGCTCGCCCACGAACTCAAACACGATCT +
Preference number: 6 (lower is better)
Translates to: PGCCLCRRHARP*AQARPRTQTRS
Trigger: AGATCGTGTTTGAGTTCGTGGGCGAGCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGACAGCATCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS CCA 72 bp GGGAACCTTTCCCATTTCACTGAGACTGGGTCCTGGTaGCGGAGGCAGGTCAGACAGGGTAAATGGGTTTGT +
Preference number: 6 (lower is better)
Translates to: GNLSHFTETGSW*RRQVRQGKWVC
Trigger: ACAAACCCATTTACCCTGTCTGACCTGCCTCCGCCACCAGGACCCAGTCTCAGTGAAATGGGAAAGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS CCA 72 bp CAAGGGAACCTTTCCCATTTCACTGAGACTGGGTCCTaGTGGCGGAGGCAGGTCAGACAGGGTAAATGGGTT +
Preference number: 6 (lower is better)
Translates to: QGNLSHFTETGS*WRRQVRQGKWV
Trigger: AACCCATTTACCCTGTCTGACCTGCCTCCGCCACCAGGACCCAGTCTCAGTGAAATGGGAAAGGTTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS CCA 72 bp GCTAAACTGAAAGAGCACCCTCTAACACATGCCTGCTaGGGCTTCAGGAGCTGCAAACATTCACCCCTAGAC +
Preference number: 6 (lower is better)
Translates to: AKLKEHPLTHAC*GFRSCKHSPLD
Trigger: GTCTAGGGGTGAATGTTTGCAGCTCCTGAAGCCCCAGCAGGCATGTGTTAGAGGGTGCTCTTTCAGTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS TCA 72 bp AGTTTCACACCAGGCCCGTGTACTTTGTCCCGACACTaGTCTGTTTCTGCCAGAAGCCACGGTTTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: SFTPGPCTLSRH*SVSARSHGFQS
Trigger: ACTTTGGAAACCGTGGCTTCTGGCAGAAACAGATCAGTGTCGGGACAAAGTACACGGGCCTGGTGTGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS GCA 72 bp AAGGCTAAACTGAAAGAGCACCCTCTAACACATGCCTaGTGGGGCTTCAGGAGCTGCAAACATTCACCCCTA +
Preference number: 6 (lower is better)
Translates to: KAKLKEHPLTHA*WGFRSCKHSPL
Trigger: TAGGGGTGAATGTTTGCAGCTCCTGAAGCCCCAGCAGGCATGTGTTAGAGGGTGCTCTTTCAGTTTAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454650.1
CDS CCA 72 bp GAAGTACCCGTGGAATTTCTTCTTCTGAAGCAGGAGTaGAAACCAGTAGCTGTCGTCGGGCCACATGTCCTT +
Preference number: 6 (lower is better)
Translates to: EVPVEFLLLKQE*KPVAVVGPHVL
Trigger: AAGGACATGTGGCCCGACGACAGCTACTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCACGGGTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1
CDS TCA 72 bp GTGTGTAGTCCAGGATGGTGTCCTGACCCTGGAACTTaGAGTACCCGTGGAATTTCTTCTTCTGAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: VCSPGWCPDPGT*STRGISSSEAG
Trigger: TCCTGCTTCAGAAGAAGAAATTCCACGGGTACTTCAAGTTCCAGGGTCAGGACACCATCCTGGACTACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339737.6
ENST00000343985.8
ENST00000356714.6
ENST00000397046.5
ENST00000397048.5
ENST00000397049.2
ENST00000487426.1