RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDCD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000015676

Ensembl transcript IDs: ENST00000338427.10, ENST00000355451.8, ENST00000460110.5, ENST00000464812.1, ENST00000472246.5, ENST00000475952.1, ENST00000478769.1, ENST00000480209.1, ENST00000487118.1, ENST00000493613.5, ENST00000497978.1

Found 752 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCAGGGTGGTGGCTCAGGGCAGAGAATCACCCACCAGACAGCGTaGCTCAACGGGAGCAAGGCGCGCAGGGACAGGCTCCACAACCAC +
Preference number: 1 (lower is better)
Translates to: VQGGGSGQRITHQTA*LNGSKARRDRLHNH
Trigger: GTGGTTGTGGAGCCTGTCCCTGCGCGCCTTGCTCCCGTTGAGCCACGCTGTCTGGTGGGTGATTCTCTGCCCTGAGCCACCACCCTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp CCTGACAGGAGGCGGCATACACCTGAGCGCCTGACAGTACCCTCGTaGACCTGCCTGAGGGTGGCCACATTCCCACACCCCATGTGTGCC +
Preference number: 1 (lower is better)
Translates to: PDRRRHTPERLTVPS*TCLRVATFPHPMCA
Trigger: GGCACACATGGGGTGTGGGAATGTGGCCACCCTCAGGCAGGTTCACGAGGGTACTGTCAGGCGCTCAGGTGTATGCCGCCTCCTGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp GGGGACCTTCCCCTGACAATAGGCCCTCTTAGCATCTGCGGGCCTTaGTTCTTGCTGGCCGTGCATGGTGCCAGGGTGCACTGCCCTGCT +
Preference number: 1 (lower is better)
Translates to: GDLPLTIGPLSICGP*FLLAVHGARVHCPA
Trigger: AGCAGGGCAGTGCACCCTGGCACCATGCACGGCCAGCAAGAATCAAGGCCCGCAGATGCTAAGAGGGCCTATTGTCAGGGGAAGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp CACCCTCTGAGGGGGAAGCAGGAAGTTGTGAGGGGTAGCCGGGCCTaGCCTCTCTTCCCTGGCACGATGCTGTCTCCCTGTGCAAAGTGG +
Preference number: 1 (lower is better)
Translates to: HPLRGKQEVVRGSRA*PLFPGTMLSPCAKW
Trigger: CCACTTTGCACAGGGAGACAGCATCGTGCCAGGGAAGAGAGGTCAGGCCCGGCTACCCCTCACAACTTCCTGCTTCCCCCTCAGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GGCAAATGGACAGTGCCGGTGGCAGCTGAACCATACTCCCGGCGATaGGCACCCAGAGCCCCTGTGAGTACTTGGAACACAGGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: GKWTVPVAAEPYSRR*APRAPVSTWNTGLR
Trigger: CCTCAGGCCTGTGTTCCAAGTACTCACAGGGGCTCTGGGTGCCCATCGCCGGGAGTATGGTTCAGCTGCCACCGGCACTGTCCATTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp AAACAGGCAGGGTGTGCCAGCTCTGGAGACTGGGCCAGTCCAGGGTaGTGGCTCAGGGCAGAGAATCACCCACCAGACAGCGTGGCTCAA +
Preference number: 1 (lower is better)
Translates to: KQAGCASSGDWASPG*WLRAENHPPDSVAQ
Trigger: TTGAGCCACGCTGTCTGGTGGGTGATTCTCTGCCCTGAGCCACCACCCTGGACTGGCCCAGTCTCCAGAGCTGGCACACCCTGCCTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp GCTCTGAGCTTGACAGACAGGCAAATGGACAGTGCCGGTGGCAGCTaGACCATACTCCCGGCGATGGGCACCCAGAGCCCCTGTGAGTAC +
Preference number: 1 (lower is better)
Translates to: ALSLTDRQMDSAGGS*TILPAMGTQSPCEY
Trigger: GTACTCACAGGGGCTCTGGGTGCCCATCGCCGGGAGTATGGTTCAGCTGCCACCGGCACTGTCCATTTGCCTGTCTGTCAAGCTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp TGCAGGCTGGACACCTCACTCTCCTCGGGCCCTGGACAAGGGAAATaGGTCACCCCGCTTTCCTCGGACCTCAGCTGGTGGGACTTAGTG +
Preference number: 1 (lower is better)
Translates to: CRLDTSLSSGPGQGK*VTPLSSDLSWWDLV
Trigger: CACTAAGTCCCACCAGCTGAGGTCCGAGGAAAGCGGGGTGACTCATTTCCCTTGTCCAGGGCCCGAGGAGAGTGAGGTGTCCAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp CAGAGCCTGTTCAGGAGGCTGCTGACTGTCCAGGGCTTTGCTGAGTaGCTGGCTCTGCCAATGGGAGGTTACCAGCAGGAGAGCCTGGAG +
Preference number: 1 (lower is better)
Translates to: QSLFRRLLTVQGFAE*LALPMGGYQQESLE
Trigger: CTCCAGGCTCTCCTGCTGGTAACCTCCCATTGGCAGAGCCAGGCACTCAGCAAAGCCCTGGACAGTCAGCAGCCTCCTGAACAGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp TGGTCTCCTCCTGAGGGCACCAGCTCTCCACTCCTGCCCACACTTTaGCACCGTGCACCCAAAGAGGACGTCTTATGGGGAGCCAAGCAC +
Preference number: 1 (lower is better)
Translates to: WSPPEGTSSPLLPTL*HRAPKEDVLWGAKH
Trigger: GTGCTTGGCTCCCCATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTGCCCTCAGGAGGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp ACAGCAGAGCCTGTTCAGGAGGCTGCTGACTGTCCAGGGCTTTGCTaGGTGCCTGGCTCTGCCAATGGGAGGTTACCAGCAGGAGAGCCT +
Preference number: 1 (lower is better)
Translates to: TAEPVQEAADCPGLC*VPGSANGRLPAGEP
Trigger: AGGCTCTCCTGCTGGTAACCTCCCATTGGCAGAGCCAGGCACTCAGCAAAGCCCTGGACAGTCAGCAGCCTCCTGAACAGGCTCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp TCTGAAGTCGTGAGTGGGGACAGCAGAGCCTGTTCAGGAGGCTGCTaGCTGTCCAGGGCTTTGCTGAGTGCCTGGCTCTGCCAATGGGAG +
Preference number: 1 (lower is better)
Translates to: SEVVSGDSRACSGGC*LSRALLSAWLCQWE
Trigger: CTCCCATTGGCAGAGCCAGGCACTCAGCAAAGCCCTGGACAGTCAGCAGCCTCCTGAACAGGCTCTGCTGTCCCCACTCACGACTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp CAAGCCCCGGGGAGGCAGACAGCGTCCACCACTACCAGGTCCACCTaGTTTAGGTATACCTTCCTACCAGGACATGAGAGCCCACAGTGG +
Preference number: 1 (lower is better)
Translates to: QAPGRQTASTTTRST*FRYTFLPGHESPQW
Trigger: CCACTGTGGGCTCTCATGTCCTGGTAGGAAGGTATACCTAAAGCAGGTGGACCTGGTAGTGGTGGACGCTGTCTGCCTCCCCGGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CAGGACTTGTGGCTGTCGAGCTCTGCTGAGCTGATGGACATGCTGTaGTCTCCTCCTGAGGGCACCAGCTCTCCACTCCTGCCCACACTT +
Preference number: 1 (lower is better)
Translates to: QDLWLSSSAELMDML*SPPEGTSSPLLPTL
Trigger: AAGTGTGGGCAGGAGTGGAGAGCTGGTGCCCTCAGGAGGAGACCACAGCATGTCCATCAGCTCAGCAGAGCTCGACAGCCACAAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp TATCCATGCTCTGAGCTTGACAGACAGGCAAATGGACAGTGCCGGTaGCAGCTGAACCATACTCCCGGCGATGGGCACCCAGAGCCCCTG +
Preference number: 1 (lower is better)
Translates to: YPCSELDRQANGQCR*QLNHTPGDGHPEPL
Trigger: CAGGGGCTCTGGGTGCCCATCGCCGGGAGTATGGTTCAGCTGCCACCGGCACTGTCCATTTGCCTGTCTGTCAAGCTCAGAGCATGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GCTGGAATAGCTTTGCAGGCTGGACACCTCACTCTCCTCGGGCCCTaGACAAGGGAAATGAGTCACCCCGCTTTCCTCGGACCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: AGIALQAGHLTLLGP*TREMSHPAFLGPQL
Trigger: CAGCTGAGGTCCGAGGAAAGCGGGGTGACTCATTTCCCTTGTCCAGGGCCCGAGGAGAGTGAGGTGTCCAGCCTGCAAAGCTATTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CCTGTGCCAGCTGGGTTCAGTGACAGTTCATCCTGCCATGGGCTCTaGTCTCCCCATCACCCTCTGAGGGGGAAGCAGGAAGTTGTGAGG +
Preference number: 1 (lower is better)
Translates to: PVPAGFSDSSSCHGL*SPHHPLRGKQEVVR
Trigger: CCTCACAACTTCCTGCTTCCCCCTCAGAGGGTGATGGGGAGACCAGAGCCCATGGCAGGATGAACTGTCACTGAACCCAGCTGGCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CTGAGTGCCTGGCTCTGCCAATGGGAGGTTACCAGCAGGAGAGCCTaGAGTGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTC +
Preference number: 1 (lower is better)
Translates to: LSAWLCQWEVTSRRA*SVEESPRPCTQLML
Trigger: GAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTCCCATTGGCAGAGCCAGGCACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp GAGGTGGGGGTGAGGTCTGTTCCCCAAGCGCAGTGTTCTGGGCAGTaGGTTCTCTGTGCAGCAGCTGACGCCTCTTGGACACATTTCCAC +
Preference number: 1 (lower is better)
Translates to: EVGVRSVPQAQCSGQ*VLCAAADASWTHFH
Trigger: GTGGAAATGTGTCCAAGAGGCGTCAGCTGCTGCACAGAGAACTCACTGCCCAGAACACTGCGCTTGGGGAACAGACCTCACCCCCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp CATACCCCCAGAGTGTTCTGGCAGACCTGTGCCAGCTGGGTTCAGTaGCAGTTCATCCTGCCATGGGCTCTGGTCTCCCCATCACCCTCT +
Preference number: 1 (lower is better)
Translates to: HTPRVFWQTCASWVQ*QFILPWALVSPSPS
Trigger: AGAGGGTGATGGGGAGACCAGAGCCCATGGCAGGATGAACTGTCACTGAACCCAGCTGGCACAGGTCTGCCAGAACACTCTGGGGGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp ACCTGGCTGGTCAGGCCAGGGAGGACAAGCTGTGGACCTAACAGGTaGCCACTGTCCAGACAAGGCCTATTCTACCTCCTTGCCTGGCTG +
Preference number: 1 (lower is better)
Translates to: TWLVRPGRTSCGPNR*PLSRQGLFYLLAWL
Trigger: CAGCCAGGCAAGGAGGTAGAATAGGCCTTGTCTGGACAGTGGTCACCTGTTAGGTCCACAGCTTGTCCTCCCTGGCCTGACCAGCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp TGGACATGCTGTGGTCTCCTCCTGAGGGCACCAGCTCTCCACTCCTaGCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGGG +
Preference number: 1 (lower is better)
Translates to: WTCCGLLLRAPALHS*PHFDTVHPKRTSYG
Trigger: CCCATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTGCCCTCAGGAGGAGACCACAGCATGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp GTGGCTTATCCATGCTCTGAGCTTGACAGACAGGCAAATGGACAGTaGCGGTGGCAGCTGAACCATACTCCCGGCGATGGGCACCCAGAG +
Preference number: 1 (lower is better)
Translates to: VAYPCSELDRQANGQ*RWQLNHTPGDGHPE
Trigger: CTCTGGGTGCCCATCGCCGGGAGTATGGTTCAGCTGCCACCGGCACTGTCCATTTGCCTGTCTGTCAAGCTCAGAGCATGGATAAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp GCTCCACAACCACACCAAGCACCGCAGTGTGGCACCGGGACCAGATaGAAGTGGCTGTTCCTGCCATGGGGCCAATACCCAATACTATCC +
Preference number: 1 (lower is better)
Translates to: APQPHQAPQCGTGTR*KWLFLPWGQYPILS
Trigger: GGATAGTATTGGGTATTGGCCCCATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGGTGTGGTTGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp CTGTGTCTTGCACAAAGTGCACACTGGGAGGCAAGAGCCTGTCTCTaGAGTAAGAAGGGCTTGGGGCAGTGCTCCGCTGGCAGGCAGACA +
Preference number: 1 (lower is better)
Translates to: LCLAQSAHWEARACL*SKKGLGQCSAGRQT
Trigger: TGTCTGCCTGCCAGCGGAGCACTGCCCCAAGCCCTTCTTACTGCAGAGACAGGCTCTTGCCTCCCAGTGTGCACTTTGTGCAAGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp AACACCTTCACTCAGTGTCAGCCACAGCGGCCACCACATAGCAGCTaGCCCCGCACCTTCTCTGGAACAGTCTGGAGATGCAAGGTCAGG +
Preference number: 1 (lower is better)
Translates to: NTFTQCQPQRPPHSS*PRTFSGTVWRCKVR
Trigger: CCTGACCTTGCATCTCCAGACTGTTCCAGAGAAGGTGCGGGGCCAGCTGCTATGTGGTGGCCGCTGTGGCTGACACTGAGTGAAGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp TGCACCTGGAGACCAAGGAGGGCCTTGGAGCCTGGTGGGCAAAGGTaGCCCTTCAGTGGAATCATTCCCAACTCTGCACTCACCCTAAGC +
Preference number: 1 (lower is better)
Translates to: CTWRPRRALEPGGQR*PFSGIIPNSALTLS
Trigger: GCTTAGGGTGAGTGCAGAGTTGGGAATGATTCCACTGAAGGGCCACCTTTGCCCACCAGGCTCCAAGGCCCTCCTTGGTCTCCAGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp TGTGGCATGGCCAGGACTGTACCTGGGGCAGATGGTCTTGCTCTTTaGTTCTGGGGAGGAGCGCAAAGTGACTGGGCTCAGGTGAAGGAG +
Preference number: 1 (lower is better)
Translates to: CGMARTVPGADGLAL*FWGGAQSDWAQVKE
Trigger: CTCCTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCCCAGAACCAAAGAGCAAGACCATCTGCCCCAGGTACAGTCCTGGCCATGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp AGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCTaGTGGACATGCTGTGGTCTCCTCCTGAGGGCACCAGCTCTCCAC +
Preference number: 1 (lower is better)
Translates to: RSKLLRTCGCRALLS*WTCCGLLLRAPALH
Trigger: GTGGAGAGCTGGTGCCCTCAGGAGGAGACCACAGCATGTCCATCAGCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp CGTGCTTTTCATCGACAAAGCGAGTCATGCTGTCCCTTCCCCAGCTaGGCTGGCTGCCAACAGGCCCAGTGGAGAGCAGATTTGAGGTGG +
Preference number: 1 (lower is better)
Translates to: RAFHRQSESCCPFPS*AGCQQAQWRADLRW
Trigger: CCACCTCAAATCTGCTCTCCACTGGGCCTGTTGGCAGCCAGCTCAGCTGGGGAAGGGACAGCATGACTCGCTTTGTCGATGAAAAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp ACAGGCCTGAGGACCTGTCTCATAATCTCGTCTTTGCACCTTGGCTaGAGTCAGTCAGCAGCCATGGCTCAGGGCATAGGCTTGGGGGTC +
Preference number: 1 (lower is better)
Translates to: TGLRTCLIISSLHLG*SQSAAMAQGIGLGV
Trigger: GACCCCCAAGCCTATGCCCTGAGCCATGGCTGCTGACTGACTCCAGCCAAGGTGCAAAGACGAGATTATGAGACAGGTCCTCAGGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CAACCACACCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTaGCTGTTCCTGCCATGGGGCCAATACCCAATACTATCCCTCAGT +
Preference number: 1 (lower is better)
Translates to: QPHQAPQCGTGTRCK*LFLPWGQYPILSLS
Trigger: ACTGAGGGATAGTATTGGGTATTGGCCCCATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGGTGTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp ATGGCCAGGACTGTACCTGGGGCAGATGGTCTTGCTCTTTGGTTCTaGGGAGGAGCGCAAAGTGACTGGGCTCAGGTGAAGGAGCTGTTG +
Preference number: 1 (lower is better)
Translates to: MARTVPGADGLALWF*GGAQSDWAQVKELL
Trigger: CAACAGCTCCTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCCCAGAACCAAAGAGCAAGACCATCTGCCCCAGGTACAGTCCTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GGGGTCTTGTCATCAGGCACCCTGAATGCTTTCAGGTGGATGGTTTaGATCTCTCCTCACCTGGCTGGTCAGGCCAGGGAGGACAAGCTG +
Preference number: 1 (lower is better)
Translates to: GVLSSGTLNAFRWMV*ISPHLAGQAREDKL
Trigger: CAGCTTGTCCTCCCTGGCCTGACCAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp ACAGTGGCTGGGGTCTTGTCATCAGGCACCCTGAATGCTTTCAGGTaGATGGTTTGGATCTCTCCTCACCTGGCTGGTCAGGCCAGGGAG +
Preference number: 1 (lower is better)
Translates to: TVAGVLSSGTLNAFR*MVWISPHLAGQARE
Trigger: CTCCCTGGCCTGACCAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCCAGCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp TCAGCAGCCATGGCTCAGGGCATAGGCTTGGGGGTCCTGAGGCAGTaGCCAGTCCCTGGAGAACAGGTAAGATTGGGCCATAAGTTCCAA +
Preference number: 1 (lower is better)
Translates to: SAAMAQGIGLGVLRQ*PVPGEQVRLGHKFQ
Trigger: TTGGAACTTATGGCCCAATCTTACCTGTTCTCCAGGGACTGGTCACTGCCTCAGGACCCCCAAGCCTATGCCCTGAGCCATGGCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp GGACATGAGAGCCCACAGTGGCTGGGGTCTTGTCATCAGGCACCCTaGATGCTTTCAGGTGGATGGTTTGGATCTCTCCTCACCTGGCTG +
Preference number: 1 (lower is better)
Translates to: GHESPQWLGSCHQAP*MLSGGWFGSLLTWL
Trigger: CAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCCAGCCACTGTGGGCTCTCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp AAGAAAGGATGGCTAGGGGTAAACAAGACGAGCAAGTCCCTGGAATaGAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTCCC +
Preference number: 1 (lower is better)
Translates to: KKGWLGVNKTSKSLE*REPRRAAEDKALPP
Trigger: GGGAGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTTGCTCGTCTTGTTTACCCCTAGCCATCCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp ACCGTGCACCCAAAGAGGACGTCTTATGGGGAGCCAAGCACAGCATaGCATGCGTGGTGGCCGGGCTTGGTTCACTTCAACAAGAACCAA +
Preference number: 1 (lower is better)
Translates to: TVHPKRTSYGEPSTA*HAWWPGLVHFNKNQ
Trigger: TTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGACGTCCTCTTTGGGTGCACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp GCCTTGATTCTTGCTGGCCGTGCATGGTGCCAGGGTGCACTGCCCTaGTGTGTGGCTTATCCATGCTCTGAGCTTGACAGACAGGCAAAT +
Preference number: 1 (lower is better)
Translates to: ALILAGRAWCQGALP*CVAYPCSELDRQAN
Trigger: ATTTGCCTGTCTGTCAAGCTCAGAGCATGGATAAGCCACACAGCAGGGCAGTGCACCCTGGCACCATGCACGGCCAGCAAGAATCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CTTATGGGGAGCCAAGCACAGCATGCCATGCGTGGTGGCCGGGCTTaGTTCACTTCAACAAGAACCAAAGCAAGGTCGCCACAGTCAGAG +
Preference number: 1 (lower is better)
Translates to: LMGSQAQHAMRGGRA*FTSTRTKARSPQSE
Trigger: CTCTGACTGTGGCGACCTTGCTTTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp AAGAGGACGTCTTATGGGGAGCCAAGCACAGCATGCCATGCGTGGTaGCCGGGCTTGGTTCACTTCAACAAGAACCAAAGCAAGGTCGCC +
Preference number: 1 (lower is better)
Translates to: KRTSYGEPSTACHAW*PGLVHFNKNQSKVA
Trigger: GGCGACCTTGCTTTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGACGTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GAACACAGGCCTGAGGACCTGTCTCATAATCTCGTCTTTGCACCTTaGCTGGAGTCAGTCAGCAGCCATGGCTCAGGGCATAGGCTTGGG +
Preference number: 1 (lower is better)
Translates to: EHRPEDLSHNLVFAP*LESVSSHGSGHRLG
Trigger: CCCAAGCCTATGCCCTGAGCCATGGCTGCTGACTGACTCCAGCCAAGGTGCAAAGACGAGATTATGAGACAGGTCCTCAGGCCTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GAACCATACTCCCGGCGATGGGCACCCAGAGCCCCTGTGAGTACTTaGAACACAGGCCTGAGGACCTGTCTCATAATCTCGTCTTTGCAC +
Preference number: 1 (lower is better)
Translates to: EPYSRRWAPRAPVST*NTGLRTCLIISSLH
Trigger: GTGCAAAGACGAGATTATGAGACAGGTCCTCAGGCCTGTGTTCCAAGTACTCACAGGGGCTCTGGGTGCCCATCGCCGGGAGTATGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp TTAACAGCAGGTATGCACCTGGAGACCAAGGAGGGCCTTGGAGCCTaGTGGGCAAAGGTGGCCCTTCAGTGGAATCATTCCCAACTCTGC +
Preference number: 1 (lower is better)
Translates to: LTAGMHLETKEGLGA*WAKVALQWNHSQLC
Trigger: GCAGAGTTGGGAATGATTCCACTGAAGGGCCACCTTTGCCCACCAGGCTCCAAGGCCCTCCTTGGTCTCCAGGTGCATACCTGCTGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GCAGATGGTCTTGCTCTTTGGTTCTGGGGAGGAGCGCAAAGTGACTaGGCTCAGGTGAAGGAGCTGTTGGCTTATGAGGAGGCTGCTCCA +
Preference number: 1 (lower is better)
Translates to: ADGLALWFWGGAQSD*AQVKELLAYEEAAP
Trigger: TGGAGCAGCCTCCTCATAAGCCAACAGCTCCTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCCCAGAACCAAAGAGCAAGACCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp TTGGTCATGATGCCACAGAGAGTGTGGCATGGCCAGGACTGTACCTaGGGCAGATGGTCTTGCTCTTTGGTTCTGGGGAGGAGCGCAAAG +
Preference number: 1 (lower is better)
Translates to: LVMMPQRVWHGQDCT*GRWSCSLVLGRSAK
Trigger: CTTTGCGCTCCTCCCCAGAACCAAAGAGCAAGACCATCTGCCCCAGGTACAGTCCTGGCCATGCCACACTCTCTGTGGCATCATGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp TCTCCAATGTGCCAGACCTGTGCTGGGCAACAAGGTTGGCTGAGATaGCCTGAGACAGGGTCCCTTGATGAACAGTCCACTGGGAATGGG +
Preference number: 1 (lower is better)
Translates to: SPMCQTCAGQQGWLR*PETGSLDEQSTGNG
Trigger: CCCATTCCCAGTGGACTGTTCATCAAGGGACCCTGTCTCAGGCCATCTCAGCCAACCTTGTTGCCCAGCACAGGTCTGGCACATTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp GTGGCCACATTCCCACACCCCATGTGTGCCTATCTCCATCAGCACTaGGAAGACAGCAAACGCCAGCTTGCCAGGGGTTTACCCAGAAAG +
Preference number: 1 (lower is better)
Translates to: VATFPHPMCAYLHQH*EDSKRQLARGLPRK
Trigger: CTTTCTGGGTAAACCCCTGGCAAGCTGGCGTTTGCTGTCTTCTCAGTGCTGATGGAGATAGGCACACATGGGGTGTGGGAATGTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp GATCATCTCCAATGTGCCAGACCTGTGCTGGGCAACAAGGTTGGCTaGGATGGCCTGAGACAGGGTCCCTTGATGAACAGTCCACTGGGA +
Preference number: 1 (lower is better)
Translates to: DHLQCARPVLGNKVG*DGLRQGPLMNSPLG
Trigger: TCCCAGTGGACTGTTCATCAAGGGACCCTGTCTCAGGCCATCTCAGCCAACCTTGTTGCCCAGCACAGGTCTGGCACATTGGAGATGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp GGTCAGTGCAGCGGCAATGTCTGGGTTGTTGAGGGTTTTGATGGGTaGTCAATGCTGGAGGATCCTCCCTCTGCCTTCCCCATCCAACAC +
Preference number: 1 (lower is better)
Translates to: GQCSGNVWVVEGFDG*SMLEDPPSAFPIQH
Trigger: GTGTTGGATGGGGAAGGCAGAGGGAGGATCCTCCAGCATTGATCACCCATCAAAACCCTCAACAACCCAGACATTGCCGCTGCACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp GCACCCAAAGAGGACGTCTTATGGGGAGCCAAGCACAGCATGCCATaGGTGGTGGCCGGGCTTGGTTCACTTCAACAAGAACCAAAGCAA +
Preference number: 1 (lower is better)
Translates to: APKEDVLWGAKHSMP*VVAGLGSLQQEPKQ
Trigger: TTGCTTTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGACGTCCTCTTTGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp AGGGGAGTCTTCACTCTCTTCTGGTTCAGTTGTGGTGGGACAGTGTaGCTTCACGCCCCATGCAGAAATTCCTCCTCTCCCAGAAGCCCT +
Preference number: 1 (lower is better)
Translates to: RGVFTLFWFSCGGTV*LHAPCRNSSSPRSP
Trigger: AGGGCTTCTGGGAGAGGAGGAATTTCTGCATGGGGCGTGAAGGCACACTGTCCCACCACAACTGAACCAGAAGAGAGTGAAGACTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp AAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTaGCATGGGGCCAATACCCAATACTATCCCTCAGTCATTCTTCCT +
Preference number: 1 (lower is better)
Translates to: KHRSVAPGPDASGCS*HGANTQYYPSVILP
Trigger: AGGAAGAATGACTGAGGGATAGTATTGGGTATTGGCCCCATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp ATGAGAGCCCACAGTGGCTGGGGTCTTGTCATCAGGCACCCTGAATaGTTTCAGGTGGATGGTTTGGATCTCTCCTCACCTGGCTGGTCA +
Preference number: 1 (lower is better)
Translates to: MRAHSGWGLVIRHPE*FQVDGLDLSSPGWS
Trigger: TGACCAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCCAGCCACTGTGGGCTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CCAAAGAGGACGTCTTATGGGGAGCCAAGCACAGCATGCCATGCGTaGTGGCCGGGCTTGGTTCACTTCAACAAGAACCAAAGCAAGGTC +
Preference number: 1 (lower is better)
Translates to: PKRTSYGEPSTACHA*WPGLVHFNKNQSKV
Trigger: GACCTTGCTTTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGACGTCCTCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CTCCTCTCCCAGAAGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTaGCTGTCGAGCTCTGCTGAGCTGATGGACATGCTGTGGTCTCCT +
Preference number: 1 (lower is better)
Translates to: LLSQKPFKVKASQDL*LSSSAELMDMLWSP
Trigger: AGGAGACCACAGCATGTCCATCAGCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCTTCTGGGAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp AGCAAAGTTAACAGCAGGTATGCACCTGGAGACCAAGGAGGGCCTTaGAGCCTGGTGGGCAAAGGTGGCCCTTCAGTGGAATCATTCCCA +
Preference number: 1 (lower is better)
Translates to: SKVNSRYAPGDQGGP*SLVGKGGPSVESFP
Trigger: TGGGAATGATTCCACTGAAGGGCCACCTTTGCCCACCAGGCTCCAAGGCCCTCCTTGGTCTCCAGGTGCATACCTGCTGTTAACTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp AGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCCCATTaGGAGGGCTCAGCAAAGTTAACAGCAGGTATGCACCTGGAGACC +
Preference number: 1 (lower is better)
Translates to: RLLCQTRRYVLEEAH*EGSAKLTAGMHLET
Trigger: GGTCTCCAGGTGCATACCTGCTGTTAACTTTGCTGAGCCCTCGCAATGGGCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GTATCTGCCACTCACCTTGGTCATGATGCCACAGAGAGTGTGGCATaGCCAGGACTGTACCTGGGGCAGATGGTCTTGCTCTTTGGTTCT +
Preference number: 1 (lower is better)
Translates to: VSATHLGHDATESVA*PGLYLGQMVLLFGS
Trigger: AGAACCAAAGAGCAAGACCATCTGCCCCAGGTACAGTCCTGGCCATGCCACACTCTCTGTGGCATCATGACCAAGGTGAGTGGCAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CTGAGTCAGCAGGCTCCTAACAGCCTGAGTGACCTCCTCATAGCATaGGGTCAGTGCAGCGGCAATGTCTGGGTTGTTGAGGGTTTTGAT +
Preference number: 1 (lower is better)
Translates to: LSQQAPNSLSDLLIA*GQCSGNVWVVEGFD
Trigger: ATCAAAACCCTCAACAACCCAGACATTGCCGCTGCACTGACCCCATGCTATGAGGAGGTCACTCAGGCTGTTAGGAGCCTGCTGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp ACAGTCTGGAGATGCAAGGTCAGGGTGGAAGGCCTGGTTCACCCTTaGAAGAAAGGATGGCTAGGGGTAAACAAGACGAGCAAGTCCCTG +
Preference number: 1 (lower is better)
Translates to: TVWRCKVRVEGLVHP*KKGWLGVNKTSKSL
Trigger: CAGGGACTTGCTCGTCTTGTTTACCCCTAGCCATCCTTTCTTTCAAGGGTGAACCAGGCCTTCCACCCTGACCTTGCATCTCCAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp AAGGTCGCCACAGTCAGAGAACAGAATCCCCGCTGCATCTGGACCTaGGCCCAGAACCTAGGCTTTCTCCGAACAACTAGAACGTGCAAA +
Preference number: 1 (lower is better)
Translates to: KVATVREQNPRCIWT*AQNLGFLRTTRTCK
Trigger: TTTGCACGTTCTAGTTGTTCGGAGAAAGCCTAGGTTCTGGGCTCAGGTCCAGATGCAGCGGGGATTCTGTTCTCTGACTGTGGCGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp TTGCTCTTTGGTTCTGGGGAGGAGCGCAAAGTGACTGGGCTCAGGTaGAGGAGCTGTTGGCTTATGAGGAGGCTGCTCCAAGAAGCAAAT +
Preference number: 1 (lower is better)
Translates to: LLFGSGEERKVTGLR*RSCWLMRRLLQEAN
Trigger: ATTTGCTTCTTGGAGCAGCCTCCTCATAAGCCAACAGCTCCTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCCCAGAACCAAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp CTTGATGAACAGTCCACTGGGAATGGGGCCTGCAGTGGCCCTGGATaGTTTCAGTATCTGCCACTCACCTTGGTCATGATGCCACAGAGA +
Preference number: 1 (lower is better)
Translates to: LDEQSTGNGACSGPG*FQYLPLTLVMMPQR
Trigger: TCTCTGTGGCATCATGACCAAGGTGAGTGGCAGATACTGAAATCATCCAGGGCCACTGCAGGCCCCATTCCCAGTGGACTGTTCATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp AGGGAGTTTCTCAAGGACTGGCCAGGTTCTGTGCTGACAACTTCGTaGTTTTCATCGACAAAGCGAGTCATGCTGTCCCTTCCCCAGCTG +
Preference number: 1 (lower is better)
Translates to: REFLKDWPGSVLTTS*FSSTKRVMLSLPQL
Trigger: CAGCTGGGGAAGGGACAGCATGACTCGCTTTGTCGATGAAAAGCACGAAGTTGTCAGCACAGAACCTGGCCAGTCCTTGAGAAACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp CAACAGCAAGCAGAGAGCAGGGGAGGAAAGACATGCTGCCTGCAGTaGCTGGTTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTG +
Preference number: 1 (lower is better)
Translates to: QQQAESRGGKTCCLQ*LVAVETKACDPNLL
Trigger: CAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAACCAGCCACTGCAGGCAGCATGTCTTTCCTCCCCTGCTCTCTGCTTGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTTCTaGCGGGTTATTTCTGGCCCTGGGAGTATGCTAGGCAATTCTAAG +
Preference number: 1 (lower is better)
Translates to: VLPPALFRGKYASPF*RVISGPGSMLGNSK
Trigger: CTTAGAATTGCCTAGCATACTCCCAGGGCCAGAAATAACCCGCCAGAAAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp TTTCAGTATCTGCCACTCACCTTGGTCATGATGCCACAGAGAGTGTaGCATGGCCAGGACTGTACCTGGGGCAGATGGTCTTGCTCTTTG +
Preference number: 1 (lower is better)
Translates to: FQYLPLTLVMMPQRV*HGQDCTWGRWSCSL
Trigger: CAAAGAGCAAGACCATCTGCCCCAGGTACAGTCCTGGCCATGCCACACTCTCTGTGGCATCATGACCAAGGTGAGTGGCAGATACTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp GCTTTAGGTATACCTTCCTACCAGGACATGAGAGCCCACAGTGGCTaGGGTCTTGTCATCAGGCACCCTGAATGCTTTCAGGTGGATGGT +
Preference number: 1 (lower is better)
Translates to: ALGIPSYQDMRAHSG*GLVIRHPECFQVDG
Trigger: ACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCCAGCCACTGTGGGCTCTCATGTCCTGGTAGGAAGGTATACCTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp TCCCCAAGCGCAGTGTTCTGGGCAGTGAGTTCTCTGTGCAGCAGCTaGCGCCTCTTGGACACATTTCCACACAAAACACTTCTCAACTGT +
Preference number: 1 (lower is better)
Translates to: SPSAVFWAVSSLCSS*RLLDTFPHKTLLNC
Trigger: ACAGTTGAGAAGTGTTTTGTGTGGAAATGTGTCCAAGAGGCGTCAGCTGCTGCACAGAGAACTCACTGCCCAGAACACTGCGCTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp CACATGGCCTTGGGAGTGTTACTTACTCCTGTGATTGTAGCACAATaGGGGGTTAGACTACAAAGTCCCTCAGGCCCTGACCAGCTCTGG +
Preference number: 1 (lower is better)
Translates to: HMALGVLLTPVIVAQ*GVRLQSPSGPDQLW
Trigger: CCAGAGCTGGTCAGGGCCTGAGGGACTTTGTAGTCTAACCCCTCATTGTGCTACAATCACAGGAGTAAGTAACACTCCCAAGGCCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp AGGTCTCCACACACTGGGTCATTAGTACCCACAAGCAATCACTGTTaGGTTCATGAACTCTCAGGCTGGAGCTCAGCAGTCCCACTAGGG +
Preference number: 1 (lower is better)
Translates to: RSPHTGSLVPTSNHC*VHELSGWSSAVPLG
Trigger: CCCTAGTGGGACTGCTGAGCTCCAGCCTGAGAGTTCATGAACTCAACAGTGATTGCTTGTGGGTACTAATGACCCAGTGTGTGGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp TCGCCTGAGAGTCCAGCAACAACTCCACATCCCAACCAGAAGACATaGAAGCAGAATAGCGTCAAAACAACAGCAAGCAGAGAGCAGGGG +
Preference number: 1 (lower is better)
Translates to: SPESPATTPHPNQKT*KQNSVKTTASREQG
Trigger: CCCCTGCTCTCTGCTTGCTGTTGTTTTGACGCTATTCTGCTTGCATGTCTTCTGGTTGGGATGTGGAGTTGTTGCTGGACTCTCAGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp CAGTGCATTCAGACCAGATGGGAAACAACCCCTAAGAATTCCCCATaGTGGTGTTTGCTGTGTACGTTGGCCTGGGACCTCAAGGCTAGA +
Preference number: 1 (lower is better)
Translates to: QCIQTRWETTPKNSP*WCLLCTLAWDLKAR
Trigger: TCTAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAACACCAGCATGGGGAATTCTTAGGGGTTGTTTCCCATCTGGTCTGAATGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp ATTTATTGCAAACCAACACCAAGGAGCTGGAATAGCTTTGCAGGCTaGACACCTCACTCTCCTCGGGCCCTGGACAAGGGAAATGAGTCA +
Preference number: 1 (lower is better)
Translates to: IYCKPTPRSWNSFAG*TPHSPRALDKGNES
Trigger: TGACTCATTTCCCTTGTCCAGGGCCCGAGGAGAGTGAGGTGTCCAGCCTGCAAAGCTATTCCAGCTCCTTGGTGTTGGTTTGCAATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp TGCATTCAGACCAGATGGGAAACAACCCCTAAGAATTCCCCATGCTaGTGTTTGCTGTGTACGTTGGCCTGGGACCTCAAGGCTAGAATG +
Preference number: 1 (lower is better)
Translates to: CIQTRWETTPKNSPC*CLLCTLAWDLKARM
Trigger: CATTCTAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAACACCAGCATGGGGAATTCTTAGGGGTTGTTTCCCATCTGGTCTGAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp GACATGCTGCCTGCAGTGGCTGGTTGCTGTGGAGACAAAAGCATGTaGTCCCAATTTGCTGGGATATCCTCTCCTGCATTTCAAACACCT +
Preference number: 1 (lower is better)
Translates to: DMLPAVAGCCGDKSM*SQFAGISSPAFQTP
Trigger: AGGTGTTTGAAATGCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAACCAGCCACTGCAGGCAGCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 90 bp ATGCAAGCACAGAGCTTCACACACTTCAATGACTTCAGCTTCGCCTaGGAGTCCAGCAACAACTCCACATCCCAACCAGAAGACATGCAA +
Preference number: 1 (lower is better)
Translates to: MQAQSFTHFNDFSFA*ESSNNSTSQPEDMQ
Trigger: TTGCATGTCTTCTGGTTGGGATGTGGAGTTGTTGCTGGACTCTCAGGCGAAGCTGAAGTCATTGAAGTGTGTGAAGCTCTGTGCTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp AGACAACAAGACTCTCACATTCCAAAGGGGGTATCTAGGGCCTTTTaGTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAG +
Preference number: 1 (lower is better)
Translates to: RQQDSHIPKGVSRAF*SPVMIGATCLDPQK
Trigger: CTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGCCCTAGATACCCCCTTTGGAATGTGAGAGTCTTGTTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp TTGGACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTaGACTCTTCAGGGGCAAATACGCCTCTCCTTTCTGGCGGGTTAT +
Preference number: 1 (lower is better)
Translates to: LDTFPHKTLLNCSPS*TLQGQIRLSFLAGY
Trigger: ATAACCCGCCAGAAAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 90 bp AAACAACCCCTAAGAATTCCCCATGCTGGTGTTTGCTGTGTACGTTaGCCTGGGACCTCAAGGCTAGAATGCAACAATAATGACCATGCA +
Preference number: 1 (lower is better)
Translates to: KQPLRIPHAGVCCVR*PGTSRLECNNNDHA
Trigger: TGCATGGTCATTATTGTTGCATTCTAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAACACCAGCATGGGGAATTCTTAGGGGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 90 bp AGACAGAACTGTCTCAGCAGCAAATGTCACACGCAGACCCAGAACTaGTTAAATACCAATTTATTGCAAACCAACACCAAGGAGCTGGAA +
Preference number: 1 (lower is better)
Translates to: RQNCLSSKCHTQTQN*LNTNLLQTNTKELE
Trigger: TTCCAGCTCCTTGGTGTTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTGCTGCTGAGACAGTTCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGAGGCGGCATACACCTaGGCGCCTGACAGTACCCTC +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQEAAYT*APDSTL
Trigger: GAGGGTACTGTCAGGCGCTCAGGTGTATGCCGCCTC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTCTTCCTACCAGGACATaGGAGCCCACAGTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTLPTRT*EPTVAG
Trigger: CCCAGCCACTGTGGGCTCTCATGTCCTGGTAGGAAG...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCCCATACTCCCGGCGATaGGCACCCAGAGCCCCTGTG +
Preference number: 2 (lower is better)
Translates to: PATWETSVSDTALCPGGSPYSRR*APRAPV
Trigger: CACAGGGGCTCTGGGTGCCCATCGCCGGGAGTATGG...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGGGCCTTGATTCTTGCTaGCCGTGCATGGTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMGLDSC*PCMVPG
Trigger: CCCTGGCACCATGCACGGCCAGCAAGAATCAAGGCC...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGGGTGGGGGCTGCAATaGGGGCCAACTCGGGAACTA +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQGWGLQ*GPTREL
Trigger: TAGTTCCCGAGTTGGCCCCCATTGCAGCCCCCACCC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGCAGCAGGTATGCACCTaGAGACCAAGGAGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLQQVCT*RPRRAL
Trigger: CAAGGCCCTCCTTGGTCTCCAGGTGCATACCTGCTG...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGAGTGCCGGTGGCAGCTaGACCATACTCCCGGCGATG +
Preference number: 2 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWSAGGS*TILPAM
Trigger: CATCGCCGGGAGTATGGTTCAGCTGCCACCGGCACT...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCCACATGGGCTGCTTaGCCTCTGACCACCAAGGAG +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQATWAA*PLTTKE
Trigger: CTCCTTGGTGGTCAGAGGTCAAGCAGCCCATGTGGC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGCTGGTTCAGTTGTGGTaGGACAGTGTGCCTTCACGC +
Preference number: 2 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLLVQLW*DSVPSR
Trigger: GCGTGAAGGCACACTGTCCCACCACAACTGAACCAG...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCGAGGGCCTTGGAGCCTaGTGGGCAAAGGTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: PATWETSVSDTALCPGGSEGLGA*WAKVAL
Trigger: AAGGGCCACCTTTGCCCACCAGGCTCCAAGGCCCTC...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTAGAGCCCACAGTGGCTaGGGTCTTGTCATCAGGCAC +
Preference number: 2 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTRAHSG*GLVIRH
Trigger: GTGCCTGATGACAAGACCCCAGCCACTGTGGGCTCT...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACGGGCTGCTTGACCTCTaGCCACCAAGGAGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDGLLDL*PPRREF
Trigger: AAACTCCCTCCTTGGTGGTCAGAGGTCAAGCAGCCC...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACTGACAGTACCCTCGTaGACCTGCCTGAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALLTVPS*TCLRVA
Trigger: GGCCACCCTCAGGCAGGTTCACGAGGGTACTGTCAG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTAGCCTCAGCCCTGCCTaGCAGGAGGCGGCATACACC +
Preference number: 2 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPSLSPA*QEAAYT
Trigger: GGTGTATGCCGCCTCCTGTCAGGCAGGGCTGAGGCT...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGCAGCCATTCCTTGCTTaGCCTCATGCAAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLQPFLA*PHASTE
Trigger: CTCTGTGCTTGCATGAGGGCAAGCAAGGAATGGCTG...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGAGCCAAGCACAGCATaGCATGCGTGGTGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSEPSTA*HAWWPG
Trigger: GCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGCCAAGCACCGCAGTGTaGCACCGGGACCAGATGCAA +
Preference number: 2 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWPSTAV*HRDQMQ
Trigger: TTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGTCCCTGACAGGTACCTaGGTTTCCCAGCCTTTGATG +
Preference number: 2 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLSLTGT*VSQPLM
Trigger: CATCAAAGGCTGGGAAACCCAGGTACCTGTCAGGGA...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTCATGAGAGCCCACAGTaGCTGGGGTCTTGTCATCAG +
Preference number: 2 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTHESPQ*LGSCHQ
Trigger: CTGATGACAAGACCCCAGCCACTGTGGGCTCTCATG...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGTGGCCCCTTGAATGGTaGCAGGGAGACCACAGCACA +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQWPLEW*QGDHST
Trigger: TGTGCTGTGGTCTCCCTGCCACCATTCAAGGGGCCA...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp AGGGACATAGCCCAGTTCTTCAGGACCGTGGGCCACATGGGCTGCTaGACCTCTGACCACCAAGGAGGGAGTTTCTCAAGGACTGGCCAG +
Preference number: 2 (lower is better)
Translates to: RDIAQFFRTVGHMGC*TSDHQGGSFSRTGQ
Trigger: CTGGCCAGTCCTTGAGAAACTCCCTCCTTGGTGGTCAGAGGTCAAGCAGCCCATGTGGCCCACGGTCCTGAAGAACTGGGCTATGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTAGGGAGGAGCGCAAAGTaGCTGGGCTCAGGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALGRSAK*LGSGEG
Trigger: TCCTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCC...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACGGCACAGCCATTCCTTaGTTGCCCTCATGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDGTAIP*LPSCKH
Trigger: GTGCTTGCATGAGGGCAAGCAAGGAATGGCTGTGCC...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGCAGGGTGCACTGCCCTaGTGTGTGGCTTATCCATGC +
Preference number: 2 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWQGALP*CVAYPC
Trigger: GCATGGATAAGCCACACAGCAGGGCAGTGCACCCTG...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCGATTCTTGCTGGCCGTaGATGGTGCCAGGGTGCACT +
Preference number: 2 (lower is better)
Translates to: PATWETSVSDTALCPGGSDSCWP*MVPGCT
Trigger: AGTGCACCCTGGCACCATGCACGGCCAGCAAGAATC...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTAGGCACCGGGACCAGATaGAAGTGGCTGTTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALGTGTR*KWLFLP
Trigger: TGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCC...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGACATGCTGCCTGCAGTaGCTGGTTGCTGTGGAGACA +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQTCCLQ*LVAVET
Trigger: TGTCTCCACAGCAACCAGCCACTGCAGGCAGCATGT...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACACCTGGCACAGAGGATaGGAAGAGGGGAGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDTWHRG*EEGSLH
Trigger: GTGAAGACTCCCCTCTTCCCATCCTCTGTGCCAGGT...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGCACTGCCCTGCTGTGTaGCTTATCCATGCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQHCPAV*LIHALS
Trigger: GCTCAGAGCATGGATAAGCCACACAGCAGGGCAGTG...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTCTTGCTGGCCGTGCATaGTGCCAGGGTGCACTGCCC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSLAGRA*CQGALP
Trigger: GGGCAGTGCACCCTGGCACCATGCACGGCCAGCAAG...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAACCCACCAGACAGCGTaGCTCAACGGGAGCAAGGCG +
Preference number: 2 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGTHQTA*LNGSKA
Trigger: CGCCTTGCTCCCGTTGAGCCACGCTGTCTGGTGGGT...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCTCGGACCTCAGCTGGTaGGACTTAGTGGCTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PATWETSVSDTALCPGGSSDLSW*DLVAGQ
Trigger: TTGGCCAGCCACTAAGTCCCACCAGCTGAGGTCCGA...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGTCTCCCTGTGCAAAGTaGGGACTTCAGGCATTTGGT +
Preference number: 2 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLSPCAK*GLQAFG
Trigger: ACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGA...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGCAAGGTTGGCTGAGATaGCCTGAGACAGGGTCCCTT +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQQGWLR*PETGSL
Trigger: AAGGGACCCTGTCTCAGGCCATCTCAGCCAACCTTG...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACGAGCTCTGCTGAGCTaGTGGACATGCTGTGGTCTC +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALRALLS*WTCCGL
Trigger: GAGACCACAGCATGTCCATCAGCTCAGCAGAGCTCG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTAGGACCCCTCATAGATaGCAAGAATTCTGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTRTPHR*QEFCSP
Trigger: TGGGGAGCAGAATTCTTGTCATCTATGAGGGGTCCT...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGCCTGCAGTGGCTGGTTaGTGTGGAGACAAAAGCATG +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQPAVAG*CGDKSM
Trigger: CATGCTTTTGTCTCCACAGCAACCAGCCACTGCAGG...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGAAAGAGGACGTCTTATaGGGAGCCAAGCACAGCATG +
Preference number: 2 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMKEDVL*GAKHSM
Trigger: CATGCTGTGCTTGGCTCCCCATAAGACGTCCTCTTT...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTAGGGTGTGCCAGCTCTaGAGACTGGGCCAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSRVCQL*RLGQSR
Trigger: CCTGGACTGGCCCAGTCTCCAGAGCTGGCACACCCT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACTGACCTCTCTTCCCTaGCACGATGCTGTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALLTSLP*HDAVSL
Trigger: CAGGGAGACAGCATCGTGCCAGGGAAGAGAGGTCAG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTGTAAGCCTTTCTGCCTaGACAGCCTCATTGAGACAG +
Preference number: 2 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTVSLSA*TASLRQ
Trigger: CTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTAC...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp GACCTAACAGGTGACCACTGTCCAGACAAGGCCTATTCTACCTCCTaGCCTGGCTGTCCCCTCCTTAGGCCTGTTGCCCCTTCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: DLTGDHCPDKAYSTS*PGCPLLRPVAPSSL
Trigger: TAGAGAGGAAGGGGCAACAGGCCTAAGGAGGGGACAGCCAGGCAAGGAGGTAGAATAGGCCTTGTCTGGACAGTGGTCACCTGTTAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp TGGGGTCTTGTCATCAGGCACCCTGAATGCTTTCAGGTGGATGGTTaGGATCTCTCCTCACCTGGCTGGTCAGGCCAGGGAGGACAAGCT +
Preference number: 2 (lower is better)
Translates to: WGLVIRHPECFQVDG*DLSSPGWSGQGGQA
Trigger: AGCTTGTCCTCCCTGGCCTGACCAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTGCTGTGGTCTCCTCCTaGGGGCACCAGCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLAVVSS*GHQLST
Trigger: AGTGGAGAGCTGGTGCCCTCAGGAGGAGACCACAGC...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTGCTGTCGAGCTCTGCTaGGCTGATGGACATGCTGTG +
Preference number: 2 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPAVELC*ADGHAV
Trigger: CACAGCATGTCCATCAGCTCAGCAGAGCTCGACAGC...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGTCTCTGTGCAGCAGCTaGCGCCTCTTGGACACATTT +
Preference number: 2 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWSLCSS*RLLDTF
Trigger: AAATGTGTCCAAGAGGCGTCAGCTGCTGCACAGAGA...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGAGGGTTTTGATGGGTaGTCAATGCTGGAGGATCCT +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQEGFDG*SMLEDP
Trigger: AGGATCCTCCAGCATTGATCACCCATCAAAACCCTC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGCACACTTTGACACCGTaGACCCAAAGAGGACGTCTT +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQHTLTP*TQRGRL
Trigger: AAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTG...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTACAGCATGCCATGCGTaGTGGCCGGGCTTGGTTCAC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSTACHA*WPGLVH
Trigger: GTGAACCAAGCCCGGCCACCACGCATGGCATGCTGT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTGGCCTTGGAGCCTGGTaGGCAAAGGTGGCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLGLGAW*AKVALQ
Trigger: CTGAAGGGCCACCTTTGCCCACCAGGCTCCAAGGCC...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACTGGCGGGTTATTTCTaGCCCTGGGAGTATGCTAGG +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALLAGYF*PWEYAR
Trigger: CCTAGCATACTCCCAGGGCCAGAAATAACCCGCCAG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGGAGCGCAAAGTGACTaGGCTCAGGTGAAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPGAQSD*AQVKEL
Trigger: CAGCTCCTTCACCTGAGCCCAGTCACTTTGCGCTCC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp TCTTATGGGGAGCCAAGCACAGCATGCCATGCGTGGTGGCCGGGCTaGGTTCACTTCAACAAGAACCAAAGCAAGGTCGCCACAGTCAGA +
Preference number: 2 (lower is better)
Translates to: SYGEPSTACHAWWPG*VHFNKNQSKVATVR
Trigger: TCTGACTGTGGCGACCTTGCTTTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp CAGTCTGTAGCCCATTCCCTGACAGGTACCTGGGTTTCCCAGCCTTaGATGACCCCAAACGCTGTCTCTTCCCTAAGGGTCACTGCCTTG +
Preference number: 2 (lower is better)
Translates to: QSVAHSLTGTWVSQP*MTPNAVSSLRVTAL
Trigger: CAAGGCAGTGACCCTTAGGGAAGAGACAGCGTTTGGGGTCATCAAAGGCTGGGAAACCCAGGTACCTGTCAGGGAATGGGCTACAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTATACACCTGAGCGCCTaGCAGTACCCTCGTGAACCT +
Preference number: 2 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPIHLSA*QYPREP
Trigger: AGGTTCACGAGGGTACTGTCAGGCGCTCAGGTGTAT...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGGAGGAAAGACATGCTaGCTGCAGTGGCTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSGGKTC*LQWLVA
Trigger: AGCAACCAGCCACTGCAGGCAGCATGTCTTTCCTCC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCATGCCTTCACGCCCCATaGAGAAATTCCTCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPCLHAP*RNSSSP
Trigger: GGGAGAGGAGGAATTTCTGCATGGGGCGTGAAGGCA...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACAGCAAACGCCAGCTTaGCAGGGGTTTACCCAGAAA +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALQQTPA*QGFTQK
Trigger: TTTCTGGGTAAACCCCTGGCAAGCTGGCGTTTGCTG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGTTCTCTGGAACAGTCTaGAGATGCAAGGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWFSGTV*RCKVRV
Trigger: CACCCTGACCTTGCATCTCCAGACTGTTCCAGAGAA...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGGCAGGAAAGCTCTTGTaGGACAGTGGTGTGCAAATC +
Preference number: 2 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWAGKLL*DSGVQI
Trigger: GATTTGCACACCACTGTCCCACAAGAGCTTTCCTGC...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTAAAGCAGGGCAGGGAGTaGGGAGAAATGCAACACAGA +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALKQGRE*GEMQHR
Trigger: TCTGTGTTGCATTTCTCCCCACTCCCTGCCCTGCTT...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAGTGGGACTTAGTGGCTaGCCAAACTGCGGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGVGLSG*PNCGCC
Trigger: ACAACAGCCGCAGTTTGGCCAGCCACTAAGTCCCAC...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCAGCTGACGCCTCTTaGACACATTTCCACACAAAA +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQAADAS*THFHTK
Trigger: TTTTGTGTGGAAATGTGTCCAAGAGGCGTCAGCTGC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGAATGGGAAAACGGTCTaGCATAAACAGACAAGCCCC +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQNGKTV*HKQTSP
Trigger: GGGGCTTGTCTGTTTATGCCAGACCGTTTTCCCATT...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp TTCCTCCTCTCCCAGAAGCCCTTCAAGGTCAAAGCTTCTCAGGACTaGTGGCTGTCGAGCTCTGCTGAGCTGATGGACATGCTGTGGTCT +
Preference number: 2 (lower is better)
Translates to: FLLSQKPFKVKASQD*WLSSSAELMDMLWS
Trigger: AGACCACAGCATGTCCATCAGCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCTTCTGGGAGAGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp GAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCCCATaGCGAGGGCTCAGCAAAGTTAACAGCAGGTATGCACCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: ETSVSDTALCPGGSP*RGLSKVNSRYAPGD
Trigger: GTCTCCAGGTGCATACCTGCTGTTAACTTTGCTGAGCCCTCGCAATGGGCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGCCGAGGATAAGGCTCTaGCTCCCCACCGGCGAGGGT +
Preference number: 2 (lower is better)
Translates to: THFHTKHFSTVLPPALFRPRIRL*LPTGEG
Trigger: ACCCTCGCCGGTGGGGAGGCAGAGCCTTATCCTCGG...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGCCCAACCAGAAGACATaGAAGCAGAATAGCGTCAAA +
Preference number: 2 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQPNQKT*KQNSVK
Trigger: TTTGACGCTATTCTGCTTGCATGTCTTCTGGTTGGG...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTAAGCACAGCATGCCATaGGTGGTGGCCGGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTKHSMP*VVAGLG
Trigger: ACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTT...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTGCGGGCCTTGATTCTTaGTGGCCGTGCATGGTGCCA +
Preference number: 2 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTAGLDS*WPCMVP
Trigger: TGGCACCATGCACGGCCAGCAAGAATCAAGGCCCGC...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTATTGATGGGTGATCAATaGTGGAGGATCCTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: ACQVCKPFCLDSLIETALLMGDQ*WRILPL
Trigger: CAGAGGGAGGATCCTCCAGCATTGATCACCCATCAA...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGATGCAAGGTCAGGGTaGAAGGCCTGGTTCACCCTT +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSDARSG*KAWFTL
Trigger: AAGGGTGAACCAGGCCTTCCACCCTGACCTTGCATC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTAATGGACAGTGCCGGTaGCAGCTGAACCATACTCCC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSNGQCR*QLNHTP
Trigger: GGGAGTATGGTTCAGCTGCCACCGGCACTGTCCATT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGTTTGCTGTGTACGTTaGCCTGGGACCTCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPVCCVR*PGTSRL
Trigger: TAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAAC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCACCAGCCACATGGCCTTaGGAGTGTTACTTACTCCTG +
Preference number: 2 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPPATWP*ECYLLL
Trigger: CAGGAGTAAGTAACACTCCCAAGGCCATGTGGCTGG...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGATGGTCTTGCTCTTTaGTTCTGGGGAGGAGCGCAA +
Preference number: 2 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPDGLAL*FWGGAQ
Trigger: TTGCGCTCCTCCCCAGAACCAAAGAGCAAGACCATC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTATGCCACAGAGAGTGTaGCATGGCCAGGACTGTACC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSMPQRV*HGQDCT
Trigger: GGTACAGTCCTGGCCATGCCACACTCTCTGTGGCAT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGACCTCCTCATAGCATaGGGTCAGTGCAGCGGCAAT +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSDLLIA*GQCSGN
Trigger: ATTGCCGCTGCACTGACCCCATGCTATGAGGAGGTC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp AGTACTTGGAACACAGGCCTGAGGACCTGTCTCATAATCTCGTCTTaGCACCTTGGCTGGAGTCAGTCAGCAGCCATGGCTCAGGGCATA +
Preference number: 2 (lower is better)
Translates to: STWNTGLRTCLIISS*HLGWSQSAAMAQGI
Trigger: TATGCCCTGAGCCATGGCTGCTGACTGACTCCAGCCAAGGTGCAAAGACGAGATTATGAGACAGGTCCTCAGGCCTGTGTTCCAAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTGGAGACAAAAGCATGTaGTCCCAATTTGCTGGGATA +
Preference number: 2 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRGDKSM*SQFAGI
Trigger: TATCCCAGCAAATTGGGATCACATGCTTTTGTCTCC...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACACATTTATAAGGGGATaGGCAAGAAGACCACGTGAA +
Preference number: 2 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDTFIRG*ARRPRE
Trigger: TTCACGTGGTCTTCTTGCTCATCCCCTTATAAATGT...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTTGTGGTGGGACAGTGTaGCTTCACGCCCCATGCAGA +
Preference number: 2 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTCGGTV*LHAPCR
Trigger: TCTGCATGGGGCGTGAAGGCACACTGTCCCACCACA...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACGCTGGCCGTGCATGGTaGCAGGGTGCACTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHAGRAW*QGALPC
Trigger: GCAGGGCAGTGCACCCTGGCACCATGCACGGCCAGC...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTAATGTGCCAGACCTGTaGTGGGCAACAAGGTTGGCT +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSNVPDL*WATRLA
Trigger: AGCCAACCTTGTTGCCCAGCACAGGTCTGGCACATT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTAGCCCAAGCCCACCCTaGATGATGCCAAGCTTAGAA +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSSPSPP*MMPSLE
Trigger: TTCTAAGCTTGGCATCATGCAGGGTGGGCTTGGGCT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACACCACCACATAGCAGCTaGCCCCGCACCTTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTPPHSS*PRTFSG
Trigger: TCCAGAGAAGGTGCGGGGCCAGCTGCTATGTGGTGG...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTGCTTCTCAGGACTTGTaGCTGTCGAGCTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLASQDL*LSSSAE
Trigger: CTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGC...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp AACAGTCTGGAGATGCAAGGTCAGGGTGGAAGGCCTGGTTCACCCTaGAAAGAAAGGATGGCTAGGGGTAAACAAGACGAGCAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: NSLEMQGQGGRPGSP*KERMARGKQDEQVP
Trigger: AGGGACTTGCTCGTCTTGTTTACCCCTAGCCATCCTTTCTTTCAAGGGTGAACCAGGCCTTCCACCCTGACCTTGCATCTCCAGACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCAGCAAGAAGACCACGTaGATGCTCTCAAAAGAGGTC +
Preference number: 2 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSSKKTT*MLSKEV
Trigger: GACCTCTTTTGAGAGCATTCACGTGGTCTTCTTGCT...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACTTTCTAAAGCTGTATTaGGATCTTGCCCAGTGCATT +
Preference number: 2 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDFLKLY*DLAQCI
Trigger: AATGCACTGGGCAAGATCTCAATACAGCTTTAGAAA...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTTGGGATATCCTCTCCTaGATTTCAAACACCTTCACT +
Preference number: 2 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRWDILS*ISNTFT
Trigger: AGTGAAGGTGTTTGAAATGCAGGAGAGGATATCCCA...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACACCTCAAGGCTAGAATaGAACAATAATGACCATGCA +
Preference number: 2 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDTSRLE*NNNDHA
Trigger: TGCATGGTCATTATTGTTGCATTCTAGCCTTGAGGT...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTCCTAAGAATTCCCCATaGTGGTGTTTGCTGTGTACG +
Preference number: 2 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPPKNSP*WCLLCT
Trigger: CGTACACAGCAAACACCAGCATGGGGAATTCTTAGG...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTGCCCCGCACCTTCTCTaGAACAGTCTGGAGATGCAA +
Preference number: 2 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTAPHLL*NSLEMQ
Trigger: TTGCATCTCCAGACTGTTCCAGAGAAGGTGCGGGGC...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAGGTTATTTCTGGCCCTaGGAGTATGCTAGGCAATTC +
Preference number: 2 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGGYFWP*EYARQF
Trigger: GAATTGCCTAGCATACTCCCAGGGCCAGAAATAACC...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp CAGACCAGATGGGAAACAACCCCTAAGAATTCCCCATGCTGGTGTTaGCTGTGTACGTTGGCCTGGGACCTCAAGGCTAGAATGCAACAA +
Preference number: 2 (lower is better)
Translates to: QTRWETTPKNSPCWC*LCTLAWDLKARMQQ
Trigger: TTGTTGCATTCTAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAACACCAGCATGGGGAATTCTTAGGGGTTGTTTCCCATCTGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTaGCTGTCTGGATATCACTTGACTTTTGGGTGTGGTTGGTGTTGC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALL*LSGYHLTFGCGWCC
Trigger: GCAACACCAACCACACCCAAAAGTCAAGTGATATCCAGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACTGGGCCAGTCCAGGGTaGTGGCTCAGGGCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHWASPG*WLRAEN
Trigger: ATTCTCTGCCCTGAGCCACCACCCTGGACTGGCCCA...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTATGCTTTCAGGTGGATaGTTTGGATCTCTCCTCACC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSMLSGG*FGSLLT
Trigger: GGTGAGGAGAGATCCAAACCATCCACCTGAAAGCAT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGACTTCAGCTTCGCCTaGGAGTCCAGCAACAACTCC +
Preference number: 2 (lower is better)
Translates to: THFHTKHFSTVLPPALFRDFSFA*ESSNNS
Trigger: GGAGTTGTTGCTGGACTCTCAGGCGAAGCTGAAGTC...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTACAAGCAATCACTGTTaGGTTCATGAACTCTCAGGC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSTSNHC*VHELSG
Trigger: GCCTGAGAGTTCATGAACTCAACAGTGATTGCTTGT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTGTATCTAGGGCCTTTTaGTCTCCTGTGATGATCGGA +
Preference number: 2 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLVSRAF*SPVMIG
Trigger: TCCGATCATCACAGGAGAGCAAAAGGCCCTAGATAC...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTAATCATTCCCAACTCTaGACTCACCCTAAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSNHSQL*THPKLS
Trigger: GGAAAGCTTAGGGTGAGTGCAGAGTTGGGAATGATT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGTGCTGACAACTTCGTaGTTTTCATCGACAAAGCGA +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSVLTTS*FSSTKR
Trigger: TCGCTTTGTCGATGAAAAGCACGAAGTTGTCAGCAC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTTCAGGGTGGAAGGCCTaGTTCACCCTTGAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTSGWKA*FTLERK
Trigger: CTTTCTTTCAAGGGTGAACCAGGCCTTCCACCCTGA...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTAAGAATTCCCCATGCTaGTGTTTGCTGTGTACGTTG +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSKNSPC*CLLCTL
Trigger: CAACGTACACAGCAAACACCAGCATGGGGAATTCTT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp GTATCTAGGGCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTaGGACCCACAGAAGACTTCCCAGGAATGCTTTCTTACAAGGGGT +
Preference number: 2 (lower is better)
Translates to: VSRAFCSPVMIGATC*DPQKTSQECFLTRG
Trigger: ACCCCTTGTAAGAAAGCATTCCTGGGAAGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGCCCTAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTCTTCACACACTTCAATaGCTTCAGCTTCGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTLHTLQ*LQLRLR
Trigger: TCTCAGGCGAAGCTGAAGTCATTGAAGTGTGTGAAG...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACCGCTGCATCTGGACCTaGGCCCAGAACCTAGGCTTT +
Preference number: 2 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHRCIWT*AQNLGF
Trigger: AAAGCCTAGGTTCTGGGCTCAGGTCCAGATGCAGCG...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCACTCCTGCCCACACTTTaGCACCGTGCACCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPLLPTL*HRAPKE
Trigger: CTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAG...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACGGCTCCAGTCTCCACTaGTCTGACCATGAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHGSSLH*SDHEAE
Trigger: CTCAGCCTCATGGTCAGAGCAGTGGAGACTGGAGCC...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACCCAGCTCTCCACTCCTaGCCACACTTTGACACCGTG +
Preference number: 2 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHPALHS*PHFDTV
Trigger: CACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGG...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTAGAAGACCACGTGAATaGTCTCAAAAGAGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTRRPRE*SQKRSR
Trigger: CCTTGACCTCTTTTGAGAGCATTCACGTGGTCTTCT...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACCAGGCAAATGGACAGTaGCGGTGGCAGCTGAACCAT +
Preference number: 2 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHQANGQ*RWQLNH
Trigger: ATGGTTCAGCTGCCACCGGCACTGTCCATTTGCCTG...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGGGAGTGGGGAGAAATaGAACACAGAATATAAAATC +
Preference number: 2 (lower is better)
Translates to: CRGVTTALHSVNALLLLSGSGEK*NTEYKI
Trigger: GATTTTATATTCTGTGTTGCATTTCTCCCCACTCCC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACGCAAGTGGCTGTTCCTaGCATGGGGCCAATACCCAA +
Preference number: 2 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHASGCS*HGANTQ
Trigger: TTGGGTATTGGCCCCATGGCAGGAACAGCCACTTGC...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACCGTGGTGGCCGGGCTTaGTTCACTTCAACAAGAACC +
Preference number: 2 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHRGGRA*FTSTRT
Trigger: GGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACG...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGTCGGAGCAACATGTTTaGACCCACAGAAGACTTCCC +
Preference number: 2 (lower is better)
Translates to: THFHTKHFSTVLPPALFRSEQHV*THRRLP
Trigger: GGGAAGTCTTCTGTGGGTCCAAACATGTTGCTCCGA...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGAAGGTGGCCCTTCAGTaGAATCATTCCCAACTCTGC +
Preference number: 2 (lower is better)
Translates to: THFHTKHFSTVLPPALFRKVALQ*NHSQLC
Trigger: GCAGAGTTGGGAATGATTCCACTGAAGGGCCACCTT...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR TCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAACCTGGACAAGGGAAATaGGTCACCCCGCTTTCCTCG +
Preference number: 2 (lower is better)
Translates to: QMSHADPELLKYQFIANQPGQGK*VTPLSS
Trigger: CGAGGAAAGCGGGGTGACTCATTTCCCTTGTCCAGG...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACAGTGATCCCAATTTGCTaGGATATCCTCTCCTGCATT +
Preference number: 2 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTVIPIC*DILSCI
Trigger: AATGCAGGAGAGGATATCCCAGCAAATTGGGATCAC...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCAGCAGTGACCAGTCCCTaGAGAACAGGTAAGATTGGG +
Preference number: 2 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPAVTSP*RTGKIG
Trigger: CCCAATCTTACCTGTTCTCCAGGGACTGGTCACTGC...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACCATGTGATCCCAATTTaGTGGGATATCCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHHVIPI*WDILSC
Trigger: GCAGGAGAGGATATCCCAGCAAATTGGGATCACATG...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGATCCTAGGACCTCAATaGGAAGAACTCCAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: THFHTKHFSTVLPPALFRILGPQ*EELQEK
Trigger: TTTTTCCTGGAGTTCTTCCCATTGAGGTCCTAGGAT...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 90 bp CCAATACCCAATACTATCCCTCAGTCATTCTTCCTAGATATTGGTTaGCTGTTTATTAAAGCAGGGCAGGGAGTGGGGAGAAATGCAACA +
Preference number: 2 (lower is better)
Translates to: PIPNTIPQSFFLDIG*LFIKAGQGVGRNAT
Trigger: TGTTGCATTTCTCCCCACTCCCTGCCCTGCTTTAATAAACAGCAAACCAATATCTAGGAAGAATGACTGAGGGATAGTATTGGGTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR GCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAACGAACAACTAGAACGTaGAAACAGGGCTCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: QMSHADPELLKYQFIANQRTTRT*KQGSSL
Trigger: GAGACTGGAGCCCTGTTTGCACGTTCTAGTTGTTCG...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGCTTCACCAGCTCAGTaGCAAATATCAGACAACAAG +
Preference number: 2 (lower is better)
Translates to: QMSHADPELLKYQFIANQASPAQ*QISDNK
Trigger: CTTGTTGTCTGATATTTGCCACTGAGCTGGTGAAGC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GGTGGCTCAGGGCAGAGAATCACCCACCAGACAGCGTaGCTCAACGGGAGCAAGGCGCGCAGGGACAGGCTC +
Preference number: 3 (lower is better)
Translates to: GGSGQRITHQTA*LNGSKARRDRL
Trigger: GAGCCTGTCCCTGCGCGCCTTGCTCCCGTTGAGCCACGCTGTCTGGTGGGTGATTCTCTGCCCTGAGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp GCCAGGGAAGACAGGCTGGACCTGGCTGTGGCCCCTTaGATGGTGGCAGGGAGACCACAGCACATCGCAGGG +
Preference number: 3 (lower is better)
Translates to: AREDRLDLAVAP*MVAGRPQHIAG
Trigger: CCCTGCGATGTGCTGTGGTCTCCCTGCCACCATTCAAGGGGCCACAGCCAGGTCCAGCCTGTCTTCCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GGGTGTGCCAGCTCTGGAGACTGGGCCAGTCCAGGGTaGTGGCTCAGGGCAGAGAATCACCCACCAGACAGC +
Preference number: 3 (lower is better)
Translates to: GCASSGDWASPG*WLRAENHPPDS
Trigger: GCTGTCTGGTGGGTGATTCTCTGCCCTGAGCCACCACCCTGGACTGGCCCAGTCTCCAGAGCTGGCACACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTaGCTCCCCACCGGCGAGGGTTTCCTTTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: AGSQEGQPRIRL*LPTGEGFLSFW
Trigger: CCAGAAGGAAAGGAAACCCTCGCCGGTGGGGAGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GGGAGGCAAGAGCCTGTCTCTGCAGTAAGAAGGGCTTaGGGCAGTGCTCCGCTGGCAGGCAGACAAGGCAGG +
Preference number: 3 (lower is better)
Translates to: GRQEPVSAVRRA*GSAPLAGRQGR
Trigger: CCTGCCTTGTCTGCCTGCCAGCGGAGCACTGCCCCAAGCCCTTCTTACTGCAGAGACAGGCTCTTGCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTaGTGCCAGGGAAGACAGGCTGGACCTGGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: LGVPEFPPLHRA*CQGRQAGPGCG
Trigger: GCCACAGCCAGGTCCAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp GACACCTCACTCTCCTCGGGCCCTGGACAAGGGAAATaGGTCACCCCGCTTTCCTCGGACCTCAGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: DTSLSSGPGQGK*VTPLSSDLSWW
Trigger: CCACCAGCTGAGGTCCGAGGAAAGCGGGGTGACTCATTTCCCTTGTCCAGGGCCCGAGGAGAGTGAGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp CCACACCAAGCACCGCAGTGTGGCACCGGGACCAGATaGAAGTGGCTGTTCCTGCCATGGGGCCAATACCCA +
Preference number: 3 (lower is better)
Translates to: PHQAPQCGTGTR*KWLFLPWGQYP
Trigger: TGGGTATTGGCCCCATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GGGGTAGCCGGGCCTGACCTCTCTTCCCTGGCACGATaGTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCAT +
Preference number: 3 (lower is better)
Translates to: GVAGPDLSSLAR*CLPVQSGDFRH
Trigger: ATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCAGGGAAGAGAGGTCAGGCCCGGCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp TGGCTCTGCCAATGGGAGGTTACCAGCAGGAGAGCCTaGAGTGTCGAGGAGTCACCACGGCCCTGCACTCAG +
Preference number: 3 (lower is better)
Translates to: WLCQWEVTSRRA*SVEESPRPCTQ
Trigger: CTGAGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTCCCATTGGCAGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGTCTCGTCTTTGCACCTaGGCTGGAGTCAGTCAGCAG +
Preference number: 3 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLSRLCT*AGVSQQ
Trigger: CTGCTGACTGACTCCAGCCAAGGTGCAAAGACGAGA...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp TGTGGTCTCCTCCTGAGGGCACCAGCTCTCCACTCCTaGCCACACTTTGACACCGTGCACCCAAAGAGGACG +
Preference number: 3 (lower is better)
Translates to: CGLLLRAPALHS*PHFDTVHPKRT
Trigger: CGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTGCCCTCAGGAGGAGACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp CATCTGCGGGCCTTGATTCTTGCTGGCCGTGCATGGTaGCAGGGTGCACTGCCCTGCTGTGTGGCTTATCCA +
Preference number: 3 (lower is better)
Translates to: HLRALILAGRAW*QGALPCCVAYP
Trigger: TGGATAAGCCACACAGCAGGGCAGTGCACCCTGGCACCATGCACGGCCAGCAAGAATCAAGGCCCGCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp ACTCAGTGTCAGCCACAGCGGCCACCACATAGCAGCTaGCCCCGCACCTTCTCTGGAACAGTCTGGAGATGC +
Preference number: 3 (lower is better)
Translates to: TQCQPQRPPHSS*PRTFSGTVWRC
Trigger: GCATCTCCAGACTGTTCCAGAGAAGGTGCGGGGCCAGCTGCTATGTGGTGGCCGCTGTGGCTGACACTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp TGGCTGTCGAGCTCTGCTGAGCTGATGGACATGCTGTaGTCTCCTCCTGAGGGCACCAGCTCTCCACTCCTG +
Preference number: 3 (lower is better)
Translates to: WLSSSAELMDML*SPPEGTSSPLL
Trigger: CAGGAGTGGAGAGCTGGTGCCCTCAGGAGGAGACCACAGCATGTCCATCAGCTCAGCAGAGCTCGACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp ACAGTGCCGGTGGCAGCTGAACCATACTCCCGGCGATaGGCACCCAGAGCCCCTGTGAGTACTTGGAACACA +
Preference number: 3 (lower is better)
Translates to: TVPVAAEPYSRR*APRAPVSTWNT
Trigger: TGTGTTCCAAGTACTCACAGGGGCTCTGGGTGCCCATCGCCGGGAGTATGGTTCAGCTGCCACCGGCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTACTCCTGCCCACACTTaGACACCGTGCACCCAAAGA +
Preference number: 3 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTTPAHT*TPCTQR
Trigger: TCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGT...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCCTATTCTACCTCCTaGCCTGGCTGTCCCCTCCTT +
Preference number: 3 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQAYSTS*PGCPLL
Trigger: AAGGAGGGGACAGCCAGGCAAGGAGGTAGAATAGGC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp CCTGAGGGCACCAGCTCTCCACTCCTGCCCACACTTTaGCACCGTGCACCCAAAGAGGACGTCTTATGGGGA +
Preference number: 3 (lower is better)
Translates to: PEGTSSPLLPTL*HRAPKEDVLWG
Trigger: TCCCCATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp CATCGACAAAGCGAGTCATGCTGTCCCTTCCCCAGCTaGGCTGGCTGCCAACAGGCCCAGTGGAGAGCAGAT +
Preference number: 3 (lower is better)
Translates to: HRQSESCCPFPS*AGCQQAQWRAD
Trigger: ATCTGCTCTCCACTGGGCCTGTTGGCAGCCAGCTCAGCTGGGGAAGGGACAGCATGACTCGCTTTGTCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp CCTGTTCAGGAGGCTGCTGACTGTCCAGGGCTTTGCTaGGTGCCTGGCTCTGCCAATGGGAGGTTACCAGCA +
Preference number: 3 (lower is better)
Translates to: PVQEAADCPGLC*VPGSANGRLPA
Trigger: TGCTGGTAACCTCCCATTGGCAGAGCCAGGCACTCAGCAAAGCCCTGGACAGTCAGCAGCCTCCTGAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp CCATGCTCTGAGCTTGACAGACAGGCAAATGGACAGTaGCGGTGGCAGCTGAACCATACTCCCGGCGATGGG +
Preference number: 3 (lower is better)
Translates to: PCSELDRQANGQ*RWQLNHTPGDG
Trigger: CCCATCGCCGGGAGTATGGTTCAGCTGCCACCGGCACTGTCCATTTGCCTGTCTGTCAAGCTCAGAGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp TTCAGGAGGCTGCTGACTGTCCAGGGCTTTGCTGAGTaGCTGGCTCTGCCAATGGGAGGTTACCAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: FRRLLTVQGFAE*LALPMGGYQQE
Trigger: CTCCTGCTGGTAACCTCCCATTGGCAGAGCCAGGCACTCAGCAAAGCCCTGGACAGTCAGCAGCCTCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CATAGCAGCTGGCCCCGCACCTTCTCTGGAACAGTCTaGAGATGCAAGGTCAGGGTGGAAGGCCTGGTTCAC +
Preference number: 3 (lower is better)
Translates to: HSSWPRTFSGTV*RCKVRVEGLVH
Trigger: GTGAACCAGGCCTTCCACCCTGACCTTGCATCTCCAGACTGTTCCAGAGAAGGTGCGGGGCCAGCTGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GCTGGGTTCAGTGACAGTTCATCCTGCCATGGGCTCTaGTCTCCCCATCACCCTCTGAGGGGGAAGCAGGAA +
Preference number: 3 (lower is better)
Translates to: AGFSDSSSCHGL*SPHHPLRGKQE
Trigger: TTCCTGCTTCCCCCTCAGAGGGTGATGGGGAGACCAGAGCCCATGGCAGGATGAACTGTCACTGAACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GCCAGGACTGTACCTGGGGCAGATGGTCTTGCTCTTTaGTTCTGGGGAGGAGCGCAAAGTGACTGGGCTCAG +
Preference number: 3 (lower is better)
Translates to: ARTVPGADGLAL*FWGGAQSDWAQ
Trigger: CTGAGCCCAGTCACTTTGCGCTCCTCCCCAGAACCAAAGAGCAAGACCATCTGCCCCAGGTACAGTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTACAGCCATTCCTTGCTaGCCCTCATGCAAGCACAGA +
Preference number: 3 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTTAIPC*PSCKHR
Trigger: TCTGTGCTTGCATGAGGGCAAGCAAGGAATGGCTGT...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGAATGGGTGGTGGGATaGAAAACCCCTACCAGACCC +
Preference number: 3 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQEWVVG*KTPTRP
Trigger: GGGTCTGGTAGGGGTTTTCAATCCCACCACCCATTC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTTATCTGCCACTCACCTaGGTCATGATGCCACAGAGA +
Preference number: 3 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTYLPLT*VMMPQR
Trigger: TCTCTGTGGCATCATGACCAAGGTGAGTGGCAGATA...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCGGCAATGTCTGGGTaGTTGAGGGTTTTGATGGGT +
Preference number: 3 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQAAMSG*LRVLMG
Trigger: ACCCATCAAAACCCTCAACAACCCAGACATTGCCGC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp CTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCTaGTGGACATGCTGTGGTCTCCTCCTGAGGGCACCA +
Preference number: 3 (lower is better)
Translates to: LLRTCGCRALLS*WTCCGLLLRAP
Trigger: TGGTGCCCTCAGGAGGAGACCACAGCATGTCCATCAGCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp GTGAGGTCTGTTCCCCAAGCGCAGTGTTCTGGGCAGTaGGTTCTCTGTGCAGCAGCTGACGCCTCTTGGACA +
Preference number: 3 (lower is better)
Translates to: VRSVPQAQCSGQ*VLCAAADASWT
Trigger: TGTCCAAGAGGCGTCAGCTGCTGCACAGAGAACTCACTGCCCAGAACACTGCGCTTGGGGAACAGACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp CCCAGTTCTTCAGGACCGTGGGCCACATGGGCTGCTTaGCCTCTGACCACCAAGGAGGGAGTTTCTCAAGGA +
Preference number: 3 (lower is better)
Translates to: PSSSGPWATWAA*PLTTKEGVSQG
Trigger: TCCTTGAGAAACTCCCTCCTTGGTGGTCAGAGGTCAAGCAGCCCATGTGGCCCACGGTCCTGAAGAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp AGAGTGTTCTGGCAGACCTGTGCCAGCTGGGTTCAGTaGCAGTTCATCCTGCCATGGGCTCTGGTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: RVFWQTCASWVQ*QFILPWALVSP
Trigger: TGGGGAGACCAGAGCCCATGGCAGGATGAACTGTCACTGAACCCAGCTGGCACAGGTCTGCCAGAACACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp GGTTCTGGGGAGGAGCGCAAAGTGACTGGGCTCAGGTaGAGGAGCTGTTGGCTTATGAGGAGGCTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: GSGEERKVTGLR*RSCWLMRRLLQ
Trigger: TTGGAGCAGCCTCCTCATAAGCCAACAGCTCCTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCCCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp CCAAAGAGGACGTCTTATGGGGAGCCAAGCACAGCATaGCATGCGTGGTGGCCGGGCTTGGTTCACTTCAAC +
Preference number: 3 (lower is better)
Translates to: PKRTSYGEPSTA*HAWWPGLVHFN
Trigger: GTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGACGTCCTCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTaGACCCAAAGAGGACGTCTTATGGGGAGCCAAGCA +
Preference number: 3 (lower is better)
Translates to: HQLSTPAHTLTP*TQRGRLMGSQA
Trigger: TGCTTGGCTCCCCATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GATGACCCCAAACGCTGTCTCTTCCCTAAGGGTCACTaGCTTGGGATTTGCCTGCAGGCTAGGCACACCTGG +
Preference number: 3 (lower is better)
Translates to: DDPKRCLFPKGH*LGICLQARHTW
Trigger: CCAGGTGTGCCTAGCCTGCAGGCAAATCCCAAGGCAGTGACCCTTAGGGAAGAGACAGCGTTTGGGGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GTGACCACTGTCCAGACAAGGCCTATTCTACCTCCTTaGCTGGCTGTCCCCTCCTTAGGCCTGTTGCCCCTT +
Preference number: 3 (lower is better)
Translates to: VTTVQTRPILPP*LAVPSLGLLPL
Trigger: AAGGGGCAACAGGCCTAAGGAGGGGACAGCCAGGCAAGGAGGTAGAATAGGCCTTGTCTGGACAGTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CAAGGTGTAGGGCATCTCACACCACTGCATCACTTCTaGAAGACTACCCACAGGGTGGGGGCTGCAATGGGG +
Preference number: 3 (lower is better)
Translates to: QGVGHLTPLHHF*KTTHRVGAAMG
Trigger: CCCCATTGCAGCCCCCACCCTGTGGGTAGTCTTCCAGAAGTGATGCAGTGGTGTGAGATGCCCTACACCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTaGCTGTTCCTGCCATGGGGCCAATACCCAATACTA +
Preference number: 3 (lower is better)
Translates to: QAPQCGTGTRCK*LFLPWGQYPIL
Trigger: TAGTATTGGGTATTGGCCCCATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp AGACCAAGGAGGGCCTTGGAGCCTGGTGGGCAAAGGTaGCCCTTCAGTGGAATCATTCCCAACTCTGCACTC +
Preference number: 3 (lower is better)
Translates to: RPRRALEPGGQR*PFSGIIPNSAL
Trigger: GAGTGCAGAGTTGGGAATGATTCCACTGAAGGGCCACCTTTGCCCACCAGGCTCCAAGGCCCTCCTTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CTGCCACTCACCTTGGTCATGATGCCACAGAGAGTGTaGCATGGCCAGGACTGTACCTGGGGCAGATGGTCT +
Preference number: 3 (lower is better)
Translates to: LPLTLVMMPQRV*HGQDCTWGRWS
Trigger: AGACCATCTGCCCCAGGTACAGTCCTGGCCATGCCACACTCTCTGTGGCATCATGACCAAGGTGAGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp AGGCTGGAGCTCAGCAGTCCCACTAGGGACCACCACTaGGGTCACAAGATGGCCTTGATCCCCAGTTATCTG +
Preference number: 3 (lower is better)
Translates to: RLELSSPTRDHH*GHKMALIPSYL
Trigger: CAGATAACTGGGGATCAAGGCCATCTTGTGACCCCAGTGGTGGTCCCTAGTGGGACTGCTGAGCTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCAGGCCTGGTTCACCCTaGAAAGAAAGGATGGCTAGG +
Preference number: 3 (lower is better)
Translates to: PATWETSVSDTALCPGGSRPGSP*KERMAR
Trigger: CCTAGCCATCCTTTCTTTCAAGGGTGAACCAGGCCT...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAGCGTGGTGGCCGGGCTaGGTTCACTTCAACAAGAAC +
Preference number: 3 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGAWWPG*VHFNKN
Trigger: GTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGC...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGGTCACAAGATGGCCTaGATCCCCAGTTATCTGGAT +
Preference number: 3 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQGHKMA*IPSYLD
Trigger: ATCCAGATAACTGGGGATCAAGGCCATCTTGTGACC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GAGGACGTCTTATGGGGAGCCAAGCACAGCATGCCATaGGTGGTGGCCGGGCTTGGTTCACTTCAACAAGAA +
Preference number: 3 (lower is better)
Translates to: EDVLWGAKHSMP*VVAGLGSLQQE
Trigger: TTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGACGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp AGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTaGCATGGGGCCAATACCCAATACTATCCCTCAGTC +
Preference number: 3 (lower is better)
Translates to: SVAPGPDASGCS*HGANTQYYPSV
Trigger: GACTGAGGGATAGTATTGGGTATTGGCCCCATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp CTGACCTCTCTTCCCTGGCACGATGCTGTCTCCCTGTaGAAAGTGGGGACTTCAGGCATTTGGTGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: LTSLPWHDAVSL*KVGTSGIWCGG
Trigger: TCCTCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCAGGGAAGAGAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GGGAGGCAGACAGCGTCCACCACTACCAGGTCCACCTaGTTTAGGTATACCTTCCTACCAGGACATGAGAGC +
Preference number: 3 (lower is better)
Translates to: GRQTASTTTRST*FRYTFLPGHES
Trigger: GCTCTCATGTCCTGGTAGGAAGGTATACCTAAAGCAGGTGGACCTGGTAGTGGTGGACGCTGTCTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GCAGAGAGCAGGGGAGGAAAGACATGCTGCCTGCAGTaGCTGGTTGCTGTGGAGACAAAAGCATGTGATCCC +
Preference number: 3 (lower is better)
Translates to: AESRGGKTCCLQ*LVAVETKACDP
Trigger: GGGATCACATGCTTTTGTCTCCACAGCAACCAGCCACTGCAGGCAGCATGTCTTTCCTCCCCTGCTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp AGCCAAGCACAGCATGCCATGCGTGGTGGCCGGGCTTaGTTCACTTCAACAAGAACCAAAGCAAGGTCGCCA +
Preference number: 3 (lower is better)
Translates to: SQAQHAMRGGRA*FTSTRTKARSP
Trigger: TGGCGACCTTGCTTTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp AAACCAACACCAAGGAGCTGGAATAGCTTTGCAGGCTaGACACCTCACTCTCCTCGGGCCCTGGACAAGGGA +
Preference number: 3 (lower is better)
Translates to: KPTPRSWNSFAG*TPHSPRALDKG
Trigger: TCCCTTGTCCAGGGCCCGAGGAGAGTGAGGTGTCCAGCCTGCAAAGCTATTCCAGCTCCTTGGTGTTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTTCTaGCGGGTTATTTCTGGCCCTGGGAGTATGCTAGGC +
Preference number: 3 (lower is better)
Translates to: PALFRGKYASPF*RVISGPGSMLG
Trigger: GCCTAGCATACTCCCAGGGCCAGAAATAACCCGCCAGAAAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CTCTTCCCTGGCACGATGCTGTCTCCCTGTGCAAAGTaGGGACTTCAGGCATTTGGTGTGGAGGAATGGGTG +
Preference number: 3 (lower is better)
Translates to: LFPGTMLSPCAK*GLQAFGVEEWV
Trigger: CACCCATTCCTCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCAGGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp ACTGTACCTGGGGCAGATGGTCTTGCTCTTTGGTTCTaGGGAGGAGCGCAAAGTGACTGGGCTCAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: TVPGADGLALWF*GGAQSDWAQVK
Trigger: CTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCCCAGAACCAAAGAGCAAGACCATCTGCCCCAGGTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp ACTCACCTTGGTCATGATGCCACAGAGAGTGTGGCATaGCCAGGACTGTACCTGGGGCAGATGGTCTTGCTC +
Preference number: 3 (lower is better)
Translates to: THLGHDATESVA*PGLYLGQMVLL
Trigger: GAGCAAGACCATCTGCCCCAGGTACAGTCCTGGCCATGCCACACTCTCTGTGGCATCATGACCAAGGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CAGGCTCCTAACAGCCTGAGTGACCTCCTCATAGCATaGGGTCAGTGCAGCGGCAATGTCTGGGTTGTTGAG +
Preference number: 3 (lower is better)
Translates to: QAPNSLSDLLIA*GQCSGNVWVVE
Trigger: CTCAACAACCCAGACATTGCCGCTGCACTGACCCCATGCTATGAGGAGGTCACTCAGGCTGTTAGGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp ATGCTTTCAGGTGGATGGTTTGGATCTCTCCTCACCTaGCTGGTCAGGCCAGGGAGGACAAGCTGTGGACCT +
Preference number: 3 (lower is better)
Translates to: MLSGGWFGSLLT*LVRPGRTSCGP
Trigger: AGGTCCACAGCTTGTCCTCCCTGGCCTGACCAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp TCATCAGGCACCCTGAATGCTTTCAGGTGGATGGTTTaGATCTCTCCTCACCTGGCTGGTCAGGCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: SSGTLNAFRWMV*ISPHLAGQARE
Trigger: CTCCCTGGCCTGACCAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACAGCTGTATTGAGATCTaGCCCAGTGCATTCAGACCA +
Preference number: 3 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDSCIEI*PSAFRP
Trigger: TGGTCTGAATGCACTGGGCAAGATCTCAATACAGCT...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCACTGAGACAGGGTCCCTaGATGAACAGTCCACTGGGA +
Preference number: 3 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPLRQGP*MNSPLG
Trigger: TCCCAGTGGACTGTTCATCAAGGGACCCTGTCTCAG...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp CAGTCCACTGGGAATGGGGCCTGCAGTGGCCCTGGATaGTTTCAGTATCTGCCACTCACCTTGGTCATGATG +
Preference number: 3 (lower is better)
Translates to: QSTGNGACSGPG*FQYLPLTLVMM
Trigger: CATCATGACCAAGGTGAGTGGCAGATACTGAAATCATCCAGGGCCACTGCAGGCCCCATTCCCAGTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp GTCAGGCCAGGGAGGACAAGCTGTGGACCTAACAGGTaGCCACTGTCCAGACAAGGCCTATTCTACCTCCTT +
Preference number: 3 (lower is better)
Translates to: VRPGRTSCGPNR*PLSRQGLFYLL
Trigger: AAGGAGGTAGAATAGGCCTTGTCTGGACAGTGGTCACCTGTTAGGTCCACAGCTTGTCCTCCCTGGCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp AGCCCACAGTGGCTGGGGTCTTGTCATCAGGCACCCTaGATGCTTTCAGGTGGATGGTTTGGATCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: SPQWLGSCHQAP*MLSGGWFGSLL
Trigger: GAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCCAGCCACTGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp AGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTaGACTCAGTTAATGCTCTACTGTTGCTGTCTGGAT +
Preference number: 3 (lower is better)
Translates to: RRAWSVEESPRP*TQLMLYCCCLD
Trigger: ATCCAGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp TCTTATGGGGAGCCAAGCACAGCATGCCATGCGTGGTaGCCGGGCTTGGTTCACTTCAACAAGAACCAAAGC +
Preference number: 3 (lower is better)
Translates to: SYGEPSTACHAW*PGLVHFNKNQS
Trigger: GCTTTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp ACGTCTTATGGGGAGCCAAGCACAGCATGCCATGCGTaGTGGCCGGGCTTGGTTCACTTCAACAAGAACCAA +
Preference number: 3 (lower is better)
Translates to: TSYGEPSTACHA*WPGLVHFNKNQ
Trigger: TTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTCCCCATAAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp TTGGGCCATAAGTTCCAAGGAGCACAGTCTGGCACCTaGCACAGAGGATGGGAAGAGGGGAGTCTTCACTCT +
Preference number: 3 (lower is better)
Translates to: LGHKFQGAQSGT*HRGWEEGSLHS
Trigger: AGAGTGAAGACTCCCCTCTTCCCATCCTCTGTGCCAGGTGCCAGACTGTGCTCCTTGGAACTTATGGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp AGGACCTGTCTCATAATCTCGTCTTTGCACCTTGGCTaGAGTCAGTCAGCAGCCATGGCTCAGGGCATAGGC +
Preference number: 3 (lower is better)
Translates to: RTCLIISSLHLG*SQSAAMAQGIG
Trigger: GCCTATGCCCTGAGCCATGGCTGCTGACTGACTCCAGCCAAGGTGCAAAGACGAGATTATGAGACAGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CCTGAGGACCTGTCTCATAATCTCGTCTTTGCACCTTaGCTGGAGTCAGTCAGCAGCCATGGCTCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: PEDLSHNLVFAP*LESVSSHGSGH
Trigger: ATGCCCTGAGCCATGGCTGCTGACTGACTCCAGCCAAGGTGCAAAGACGAGATTATGAGACAGGTCCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATaGGGCCAATACCCAATACTATCCCTCAGTCATTCT +
Preference number: 3 (lower is better)
Translates to: GTGTRCKWLFLP*GQYPILSLSHS
Trigger: AGAATGACTGAGGGATAGTATTGGGTATTGGCCCCATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CTTGCTCTTTGGTTCTGGGGAGGAGCGCAAAGTGACTaGGCTCAGGTGAAGGAGCTGTTGGCTTATGAGGAG +
Preference number: 3 (lower is better)
Translates to: LALWFWGGAQSD*AQVKELLAYEE
Trigger: CTCCTCATAAGCCAACAGCTCCTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCCCAGAACCAAAGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GGGGTCTTGTCATCAGGCACCCTGAATGCTTTCAGGTaGATGGTTTGGATCTCTCCTCACCTGGCTGGTCAG +
Preference number: 3 (lower is better)
Translates to: GVLSSGTLNAFR*MVWISPHLAGQ
Trigger: CTGACCAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCCAAACTGCGGCTGTaGTGTCTAAAAAGAGAAAAC +
Preference number: 3 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQAKLRL*CLKREN
Trigger: GTTTTCTCTTTTTAGACACAACAGCCGCAGTTTGGC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp TTCCCACACCCCATGTGTGCCTATCTCCATCAGCACTaGGAAGACAGCAAACGCCAGCTTGCCAGGGGTTTA +
Preference number: 3 (lower is better)
Translates to: FPHPMCAYLHQH*EDSKRQLARGL
Trigger: TAAACCCCTGGCAAGCTGGCGTTTGCTGTCTTCTCAGTGCTGATGGAGATAGGCACACATGGGGTGTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GCCCAGAACCTAGGCTTTCTCCGAACAACTAGAACGTaGAAACAGGGCTCCAGTCTCCACTGCTCTGACCAT +
Preference number: 3 (lower is better)
Translates to: AQNLGFLRTTRT*KQGSSLHCSDH
Trigger: ATGGTCAGAGCAGTGGAGACTGGAGCCCTGTTTGCACGTTCTAGTTGTTCGGAGAAAGCCTAGGTTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp TTCACTCTCTTCTGGTTCAGTTGTGGTGGGACAGTGTaGCTTCACGCCCCATGCAGAAATTCCTCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: FTLFWFSCGGTV*LHAPCRNSSSP
Trigger: GGGAGAGGAGGAATTTCTGCATGGGGCGTGAAGGCACACTGTCCCACCACAACTGAACCAGAAGAGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp CACAGTGGCTGGGGTCTTGTCATCAGGCACCCTGAATaGTTTCAGGTGGATGGTTTGGATCTCTCCTCACCT +
Preference number: 3 (lower is better)
Translates to: HSGWGLVIRHPE*FQVDGLDLSSP
Trigger: AGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGACAAGACCCCAGCCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CAGAAGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTaGCTGTCGAGCTCTGCTGAGCTGATGGACATGCTG +
Preference number: 3 (lower is better)
Translates to: QKPFKVKASQDL*LSSSAELMDML
Trigger: CAGCATGTCCATCAGCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GAGGGGAGTCTTCACTCTCTTCTGGTTCAGTTGTGGTaGGACAGTGTGCCTTCACGCCCCATGCAGAAATTC +
Preference number: 3 (lower is better)
Translates to: EGSLHSLLVQLW*DSVPSRPMQKF
Trigger: GAATTTCTGCATGGGGCGTGAAGGCACACTGTCCCACCACAACTGAACCAGAAGAGAGTGAAGACTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGCATGTGATCCCAATTaGCTGGGATATCCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPACDPN*LGYPLL
Trigger: CAGGAGAGGATATCCCAGCAAATTGGGATCACATGC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTGGAGCTGGAATAGCTTaGCAGGCTGGACACCTCACT +
Preference number: 3 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLGAGIA*QAGHLT
Trigger: AGTGAGGTGTCCAGCCTGCAAAGCTATTCCAGCTCC...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTTTACCTGCCTGTGTCTaGCACAAAGTGCACACTGGG +
Preference number: 3 (lower is better)
Translates to: CRGVTTALHSVNALLLLSLPACV*HKVHTG
Trigger: CCCAGTGTGCACTTTGTGCAAGACACAGGCAGGTAA...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp ACAGTCAGAGAACAGAATCCCCGCTGCATCTGGACCTaGGCCCAGAACCTAGGCTTTCTCCGAACAACTAGA +
Preference number: 3 (lower is better)
Translates to: TVREQNPRCIWT*AQNLGFLRTTR
Trigger: TCTAGTTGTTCGGAGAAAGCCTAGGTTCTGGGCTCAGGTCCAGATGCAGCGGGGATTCTGTTCTCTGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp ATGTCTGGGTTGTTGAGGGTTTTGATGGGTGATCAATaGTGGAGGATCCTCCCTCTGCCTTCCCCATCCAAC +
Preference number: 3 (lower is better)
Translates to: MSGLLRVLMGDQ*WRILPLPSPSN
Trigger: GTTGGATGGGGAAGGCAGAGGGAGGATCCTCCAGCATTGATCACCCATCAAAACCCTCAACAACCCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp AGAGCAGGGGAGGAAAGACATGCTGCCTGCAGTGGCTaGTTGCTGTGGAGACAAAAGCATGTGATCCCAATT +
Preference number: 3 (lower is better)
Translates to: RAGEERHAACSG*LLWRQKHVIPI
Trigger: AATTGGGATCACATGCTTTTGTCTCCACAGCAACCAGCCACTGCAGGCAGCATGTCTTTCCTCCCCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp ACCAGATGGGAAACAACCCCTAAGAATTCCCCATGCTaGTGTTTGCTGTGTACGTTGGCCTGGGACCTCAAG +
Preference number: 3 (lower is better)
Translates to: TRWETTPKNSPC*CLLCTLAWDLK
Trigger: CTTGAGGTCCCAGGCCAACGTACACAGCAAACACCAGCATGGGGAATTCTTAGGGGTTGTTTCCCATCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp GCAGTGTTCTGGGCAGTGAGTTCTCTGTGCAGCAGCTaGCGCCTCTTGGACACATTTCCACACAAAACACTT +
Preference number: 3 (lower is better)
Translates to: AVFWAVSSLCSS*RLLDTFPHKTL
Trigger: AAGTGTTTTGTGTGGAAATGTGTCCAAGAGGCGTCAGCTGCTGCACAGAGAACTCACTGCCCAGAACACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp CTGGATGATTTCAGTATCTGCCACTCACCTTGGTCATaGTGCCACAGAGAGTGTGGCATGGCCAGGACTGTA +
Preference number: 3 (lower is better)
Translates to: LDDFSICHSPWS*CHRECGMARTV
Trigger: TACAGTCCTGGCCATGCCACACTCTCTGTGGCATCATGACCAAGGTGAGTGGCAGATACTGAAATCATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp CTCAAGGACTGGCCAGGTTCTGTGCTGACAACTTCGTaGTTTTCATCGACAAAGCGAGTCATGCTGTCCCTT +
Preference number: 3 (lower is better)
Translates to: LKDWPGSVLTTS*FSSTKRVMLSL
Trigger: AAGGGACAGCATGACTCGCTTTGTCGATGAAAAGCACGAAGTTGTCAGCACAGAACCTGGCCAGTCCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTCTCATAATCTCGTCTTaGCACCTTGGCTGGAGTCAG +
Preference number: 3 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTLIISS*HLGWSQ
Trigger: CTGACTCCAGCCAAGGTGCAAAGACGAGATTATGAG...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp CAGAGCTTCACACACTTCAATGACTTCAGCTTCGCCTaGGAGTCCAGCAACAACTCCACATCCCAACCAGAA +
Preference number: 3 (lower is better)
Translates to: QSFTHFNDFSFA*ESSNNSTSQPE
Trigger: TTCTGGTTGGGATGTGGAGTTGTTGCTGGACTCTCAGGCGAAGCTGAAGTCATTGAAGTGTGTGAAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GACTCTCACATTCCAAAGGGGGTATCTAGGGCCTTTTaGTCTCCTGTGATGATCGGAGCAACATGTTTGGAC +
Preference number: 3 (lower is better)
Translates to: DSHIPKGVSRAF*SPVMIGATCLD
Trigger: GTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGCCCTAGATACCCCCTTTGGAATGTGAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTGGAGAACAGGTAAGATaGGGCCATAAGTTCCAAGGA +
Preference number: 3 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTGEQVR*GHKFQG
Trigger: TCCTTGGAACTTATGGCCCAATCTTACCTGTTCTCC...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp TTGGGAGTGTTACTTACTCCTGTGATTGTAGCACAATaGGGGGTTAGACTACAAAGTCCCTCAGGCCCTGAC +
Preference number: 3 (lower is better)
Translates to: LGVLLTPVIVAQ*GVRLQSPSGPD
Trigger: GTCAGGGCCTGAGGGACTTTGTAGTCTAACCCCTCATTGTGCTACAATCACAGGAGTAAGTAACACTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp GTTAGTTTTAGCAGAGGTGTGAAGGTGATTCCTCTCTaGGCTGGAGGTGGAAGCAAATGGGAAAACGGTCTG +
Preference number: 3 (lower is better)
Translates to: VSFSRGVKVIPL*AGGGSKWENGL
Trigger: CAGACCGTTTTCCCATTTGCTTCCACCTCCAGCTCAGAGAGGAATCACCTTCACACCTCTGCTAAAACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp TTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTaGACTCTTCAGGGGCAAATACGCCTCTCCTTTCTG +
Preference number: 3 (lower is better)
Translates to: FPHKTLLNCSPS*TLQGQIRLSFL
Trigger: CAGAAAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACTCTCTTCTGGTTCAGTaGTGGTGGGACAGTGTGCCT +
Preference number: 3 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHSLLVQ*WWDSVP
Trigger: AGGCACACTGTCCCACCACAACTGAACCAGAAGAGA...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp GCAAAGGTGGCCCTTCAGTGGAATCATTCCCAACTCTaGACTCACCCTAAGCTTTCCAGTAACTACAGAATT +
Preference number: 3 (lower is better)
Translates to: AKVALQWNHSQL*THPKLSSNYRI
Trigger: AATTCTGTAGTTACTGGAAAGCTTAGGGTGAGTGCAGAGTTGGGAATGATTCCACTGAAGGGCCACCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp GGTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTaGCAAATATCAGACAACAAGACTCTCACATTCCAA +
Preference number: 3 (lower is better)
Translates to: GRDLFRGASPAQ*QISDNKTLTFQ
Trigger: TTGGAATGTGAGAGTCTTGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CTAAGAATTCCCCATGCTGGTGTTTGCTGTGTACGTTaGCCTGGGACCTCAAGGCTAGAATGCAACAATAAT +
Preference number: 3 (lower is better)
Translates to: LRIPHAGVCCVR*PGTSRLECNNN
Trigger: ATTATTGTTGCATTCTAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAACACCAGCATGGGGAATTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR GCA 72 bp TGGTTGCTGTGGAGACAAAAGCATGTGATCCCAATTTaGTGGGATATCCTCTCCTGCATTTCAAACACCTTC +
Preference number: 3 (lower is better)
Translates to: WLLWRQKHVIPI*WDILSCISNTF
Trigger: GAAGGTGTTTGAAATGCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp CCACCCTGCATGATGCCAAGCTTAGAAATGTCACCCTaGAGTCACAAAATCCCTTCTTTGCATTACCAAAAG +
Preference number: 3 (lower is better)
Translates to: PPCMMPSLEMSP*SHKIPSLHYQK
Trigger: CTTTTGGTAATGCAAAGAAGGGATTTTGTGACTCCAGGGTGACATTTCTAAGCTTGGCATCATGCAGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CCA 72 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTaGGATATCCTCTCCTGCATTTCAAACACCTTCACT +
Preference number: 3 (lower is better)
Translates to: LLWRQKHVIPIC*DILSCISNTFT
Trigger: AGTGAAGGTGTTTGAAATGCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAATCCATGCTCTGAGCTaGACAGACAGGCAAATGGAC +
Preference number: 3 (lower is better)
Translates to: QMSHADPELLKYQFIANQIHALS*TDRQMD
Trigger: GTCCATTTGCCTGTCTGTCAAGCTCAGAGCATGGAT...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR-3UTR CAA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAATCGGAGCAACATGTTaGGACCCACAGAAGACTTCC +
Preference number: 3 (lower is better)
Translates to: QMSHADPELLKYQFIANQIGATC*DPQKTS
Trigger: GGAAGTCTTCTGTGGGTCCAAACATGTTGCTCCGAT...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp ACTGGTCAAAATCTTACAGGATTTCTAAAGCTGTATTaGGATCTTGCCCAGTGCATTCAGACCAGATGGGAA +
Preference number: 3 (lower is better)
Translates to: TGQNLTGFLKLY*DLAQCIQTRWE
Trigger: TTCCCATCTGGTCTGAATGCACTGGGCAAGATCTCAATACAGCTTTAGAAATCCTGTAAGATTTTGACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR TCA 72 bp ATCCATATTAGTGTGAGCTGGGTGAGTAGTTTAGTCTaGAATGACAGAATATTCATTTTTCGTCTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: IHISVSWVSSLV*NDRIFIFRLSE
Trigger: CTCAGAGAGACGAAAAATGAATATTCTGTCATTTCAGACTAAACTACTCACCCAGCTCACACTAATATGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGCCCTATGGGGCACCCTaGCGTCCAGTGGGCACTCCC +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMPYGAP*RPVGTP
Trigger: GGGAGTGCCCACTGGACGCCAGGGTGCCCCATAGGG...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGGAGCCAAGCACAGCATaGCATGCGTGGTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMEPSTA*HAWWPG
Trigger: GCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTC...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGGGCCTTGGAGCCTGGTaGGCAAAGGTGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLGLGAW*AKVALQ
Trigger: CTGAAGGGCCACCTTTGCCCACCAGGCTCCAAGGCC...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGCTGACAGTACCCTCGTaGACCTGCCTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMLTVPS*TCLRVA
Trigger: GGCCACCCTCAGGCAGGTTCACGAGGGTACTGTCAG...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTGCTGGCCGTGCATGGTaGCAGGGTGCACTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPAGRAW*QGALPC
Trigger: GCAGGGCAGTGCACCCTGGCACCATGCACGGCCAGC...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCAGGCAGCAGGGAGGCTaGCCAGGGTCACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSRQQGG*PGSPPR
Trigger: CCTGGGAGGTGACCCTGGCCAGCCTCCCTGCTGCCT...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGGCAGTAAGAAGGGCTTaGGGCAGTGCTCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLAVRRA*GSAPLA
Trigger: TGCCAGCGGAGCACTGCCCCAAGCCCTTCTTACTGC...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGCGCTGCATCTGGACCTaGGCCCAGAACCTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLRCIWT*AQNLGF
Trigger: AAAGCCTAGGTTCTGGGCTCAGGTCCAGATGCAGCG...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTTGTCCCTTCCCCAGCTaGGCTGGCTGCCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRCPFPS*AGCQQA
Trigger: GGCCTGTTGGCAGCCAGCTCAGCTGGGGAAGGGACA...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTGCGGGCCTTGATTCTTaGTGGCCGTGCATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTAGLDS*WPCMVP
Trigger: TGGCACCATGCACGGCCAGCAAGAATCAAGGCCCGC...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGCACTGCCTTGGGATTTaGCTGCAGGCTAGGCACACC +
Preference number: 4 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLHCLGI*LQARHT
Trigger: GGTGTGCCTAGCCTGCAGGCAAATCCCAAGGCAGTG...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTACGCGCAGGAAATCCTaGACGTTGCCCACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTTRRKS*TLPTCC
Trigger: GCAGCACGTGGGCAACGTCCAGGATTTCCTGCGCGT...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTCCATACTCCCGGCGATaGGCACCCAGAGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPPYSRR*APRAPV
Trigger: CACAGGGGCTCTGGGTGCCCATCGCCGGGAGTATGG...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTTCCTCGGACCTCAGCTaGTGGGACTTAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTSSDLS*WDLVAG
Trigger: GCCAGCCACTAAGTCCCACCAGCTGAGGTCCGAGGA...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGAGTGGAGAGCAGATTTaGGGTGGGGGTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLSGEQI*GGGEVC
Trigger: ACAGACCTCACCCCCACCTCAAATCTGCTCTCCACT...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGACGTTGCCCACGTGCTaGAGGATGCCCAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQTLPTC*RMPKRA
Trigger: GGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGT...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGGGCACAGCCATTCCTTaGTTGCCCTCATGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLGTAIP*LPSCKH
Trigger: GTGCTTGCATGAGGGCAAGCAAGGAATGGCTGTGCC...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGCCTCCTCATCCACGGTaGCCATGGAGCGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQPPHPR*PWSAPC
Trigger: ACAAGGAGCGCTCCATGGCCACCGTGGATGAGGAGG...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGGCACAGTCTGGCACCTaGCACAGAGGATGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMAQSGT*HRGWEE
Trigger: CTCTTCCCATCCTCTGTGCCAGGTGCCAGACTGTGC...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTCACCCTGGCGTCCAGTaGGCACTCCCCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPHPGVQ*ALPRAA
Trigger: TGCTGCCCTGGGGAGTGCCCACTGGACGCCAGGGTG...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGACAGAGAGTGTGGCATaGCCAGGACTGTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMTESVA*PGLYLG
Trigger: CCCCAGGTACAGTCCTGGCCATGCCACACTCTCTGT...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGAGCCTCAGCCCTGCCTaGCAGGAGGCGGCATACACC +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMSLSPA*QEAAYT
Trigger: GGTGTATGCCGCCTCCTGTCAGGCAGGGCTGAGGCT...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTAAGTCCCTCAGGCCCTaGCCAGCTCTGGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPKSLRP*PALGKK
Trigger: CTTCTTCCCCAGAGCTGGTCAGGGCCTGAGGGACTT...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTGGGAGGAGCGCAAAGTaGCTGGGCTCAGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRGRSAK*LGSGEG
Trigger: TCCTTCACCTGAGCCCAGTCACTTTGCGCTCCTCCC...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTCCCACACCCCATGTGTaGCTATCTCCATCAGCACTG +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTPTPHV*LSPSAL
Trigger: CAGTGCTGATGGAGATAGGCACACATGGGGTGTGGG...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTTCCAGTAGCAGGTGTTaGACAGTGGGGAATGGTGGG +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTSSSRC*TVGNGG
Trigger: CCCACCATTCCCCACTGTGCAACACCTGCTACTGGA...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGCCTGGGAAGAATTGGTaGTTCCCTAGGGACTTCAGC +
Preference number: 4 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLPGKNW*FPRDFS
Trigger: GCTGAAGTCCCTAGGGAACCACCAATTCTTCCCAGG...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTGGCCCTGACCAGCTCTaGGGAAGAAGGCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRGPDQL*GRRPRT
Trigger: AGTCCTAGGCCTTCTTCCCCAGAGCTGGTCAGGGCC...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGGACCTCCTCATAGCATaGGGTCAGTGCAGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMDLLIA*GQCSGN
Trigger: ATTGCCGCTGCACTGACCCCATGCTATGAGGAGGTC...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACAGAGCCCACAGTGGCTaGGGTCTTGTCATCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDRAHSG*GLVIRH
Trigger: GTGCCTGATGACAAGACCCCAGCCACTGTGGGCTCT...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTCTGTGGCCCCTTGAATaGTGGCAGGGAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPLWPLE*WQGDHS
Trigger: GCTGTGGTCTCCCTGCCACCATTCAAGGGGCCACAG...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACAAGACAGGCTGGACCTaGCTGTGGCCCCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDKTGWT*LWPLEW
Trigger: CCATTCAAGGGGCCACAGCCAGGTCCAGCCTGTCTT...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp GCCCAGTTCTTCAGGACCGTGGGCCACATGGGCTGCTaGACCTCTGACCACCAAGGAGGGAGTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: AQFFRTVGHMGC*TSDHQGGSFSR
Trigger: CCTTGAGAAACTCCCTCCTTGGTGGTCAGAGGTCAAGCAGCCCATGTGGCCCACGGTCCTGAAGAACTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTCAGCTGCAGCAGCTaGCACAGTCTTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRLSCSS*HSLGLF
Trigger: GAAGAGGCCAAGACTGTGTCAGCTGCTGCAGCTGAG...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTGCTGCTAAGGGCCACTaGGACCTGCTTTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRAAKGH*DLLSLH
Trigger: GTGAAGGGAAAGCAGGTCTCAGTGGCCCTTAGCAGC...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCCGAGCTCTGCTGAGCTaGTGGACATGCTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSRALLS*WTCCGL
Trigger: GAGACCACAGCATGTCCATCAGCTCAGCAGAGCTCG...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCAGTGCCGGTGGCAGCTaGACCATACTCCCGGCGATG +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSSAGGS*TILPAM
Trigger: CATCGCCGGGAGTATGGTTCAGCTGCCACCGGCACT...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTGGAAGCAGGAAGTTGTaGGGGGTAGCCGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPGSRKL*GVAGPD
Trigger: GTCAGGCCCGGCTACCCCTCACAACTTCCTGCTTCC...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGTGCAGTGGCCCTGGATaGTTTCAGTATCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMCSGPG*FQYLPL
Trigger: GAGTGGCAGATACTGAAATCATCCAGGGCCACTGCA...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGTGTCATCAGGCACCCTaGATGCTTTCAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMCHQAP*MLSGGW
Trigger: CCATCCACCTGAAAGCATTCAGGGTGCCTGATGACA...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCCCACGTGCTGCAGGATaGCCAAAAGGGCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSPRAAG*PKGPGH
Trigger: ATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGG...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTAGCAGCACCAGCAACTaGTCCTGGAGCTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRSSTSN*SWSFCL
Trigger: GAGGCAGAAGCTCCAGGAGCAGTTGCTGGTGCTGCT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGTTTCCCTTCACCACGTaGTTGGGTACTGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQFPFTT*LGTGTL
Trigger: CAGGGTGCCAGTACCCAAGCACGTGGTGAAGGGAAA...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTCCTGCAGTGGCTGGTTaGTGTGGAGACAAAAGCATG +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTPAVAG*CGDKSM
Trigger: CATGCTTTTGTCTCCACAGCAACCAGCCACTGCAGG...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGCACACTTTGACACCGTaGACCCAAAGAGGACGTCTT +
Preference number: 4 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLHTLTP*TQRGRL
Trigger: AAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTG...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTTGCATGGTGCCAGGGTaGACTGCCCTGCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPCMVPG*TALLCG
Trigger: GCCACACAGCAGGGCAGTGCACCCTGGCACCATGCA...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGATAGCATGGGGTCAGTaGAGCGGCAATGTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMIAWGQ*SGNVWV
Trigger: AACCCAGACATTGCCGCTGCACTGACCCCATGCTAT...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTAATAGCTTTGCAGGCTaGACACCTCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTNSFAG*TPHSPR
Trigger: CCGAGGAGAGTGAGGTGTCCAGCCTGCAAAGCTATT...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTCACGGCGTTATGTCCTaGAGGAAGCCCATTGCGAGG +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPHGVMS*RKPIAR
Trigger: CCTCGCAATGGGCTTCCTCCAGGACATAACGCCGTG...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGCTTCCCCAGCTGAGCTaGCTGCCAACAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMLPQLS*LPTGPV
Trigger: CACTGGGCCTGTTGGCAGCCAGCTCAGCTGGGGAAG...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCCCCAGGGCAGCAGCCTaGTTTAAATGCCTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSPRAAA*FKCLFP
Trigger: GGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGG...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCGGCCAGGACTGTACCTaGGGCAGATGGTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSGQDCT*GRWSCS
Trigger: AGAGCAAGACCATCTGCCCCAGGTACAGTCCTGGCC...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTGAATGGGGCCTGCAGTaGCCCTGGATGATTTCAGTA +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTEWGLQ*PWMISV
Trigger: TACTGAAATCATCCAGGGCCACTGCAGGCCCCATTC...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCGTGCCAGACCTGTGCTaGGCAACAAGGTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSVPDLC*ATRLAE
Trigger: CTCAGCCAACCTTGTTGCCCAGCACAGGTCTGGCAC...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCTGGCCCCTTGAATGGTaGCAGGGAGACCACAGCACA +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSWPLEW*QGDHST
Trigger: TGTGCTGTGGTCTCCCTGCCACCATTCAAGGGGCCA...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGCCAGGGAAGACAGGCTaGACCTGGCTGTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMPGKTG*TWLWPL
Trigger: AAGGGGCCACAGCCAGGTCCAGCCTGTCTTCCCTGG...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACGCTTTGCTGAGTGCCTaGCTCTGCCAATGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDALLSA*LCQWEV
Trigger: AACCTCCCATTGGCAGAGCCAGGCACTCAGCAAAGC...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCACCCCCGGGGAGATGTTaGACATGGCAGGGTCGAATC +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPPPGRC*TWQGRI
Trigger: GATTCGACCCTGCCATGTTCAACATCTCCCCGGGGG...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACCTCTTCTCATCATCCTaGCGGGCCATGTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDLFSSS*RAMWSK
Trigger: CTTTGACCACATGGCCCGTCAGGATGATGAGAAGAG...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGCCACATGGGCTGCTTaGCCTCTGACCACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSATWAA*PLTTKE
Trigger: CTCCTTGGTGGTCAGAGGTCAAGCAGCCCATGTGGC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGGGAGCTGTTGGCTTATaGGGAGGCTGCTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWGAVGL*GGCSKK
Trigger: CTTCTTGGAGCAGCCTCCTCATAAGCCAACAGCTCC...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGCACTCACCTTGGTCATaGTGCCACAGAGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWHSPWS*CHRECG
Trigger: GCCACACTCTCTGTGGCATCATGACCAAGGTGAGTG...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTGAGGGTTTTGATGGGTaGTCAATGCTGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTEGFDG*SMLEDP
Trigger: AGGATCCTCCAGCATTGATCACCCATCAAAACCCTC...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTAACAGTCACCCATATTaGGCCCAAGCCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRNSHPY*AQAHPA
Trigger: TGCAGGGTGGGCTTGGGCTCAATATGGGTGACTGTT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTATGTCCAGGGCTTTGCTaGGTGCCTGGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: ACQVCKPFCLDSLIETALCPGLC*VPGSAN
Trigger: ATTGGCAGAGCCAGGCACTCAGCAAAGCCCTGGACA...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGGGCACCGGGACCAGATaGAAGTGGCTGTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMGTGTR*KWLFLP
Trigger: TGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCC...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGTTGATGGGTGATCAATaGTGGAGGATCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMLMGDQ*WRILPL
Trigger: CAGAGGGAGGATCCTCCAGCATTGATCACCCATCAA...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCGTGGTCACTCAGGGGTaGTGGAATCTTCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSVVTQG*WNLPHL
Trigger: AAGGTGGGGAAGATTCCAGCACCCCTGAGTGACCAC...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACAGCCCAAGCCCACCCTaGATGATGCCAAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDSPSPP*MMPSLE
Trigger: TTCTAAGCTTGGCATCATGCAGGGTGGGCTTGGGCT...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTGATGCAAGGTCAGGGTaGAAGGCCTGGTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPDARSG*KAWFTL
Trigger: AAGGGTGAACCAGGCCTTCCACCCTGACCTTGCATC...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTGCCCCGCACCTTCTCTaGAACAGTCTGGAGATGCAA +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPAPHLL*NSLEMQ
Trigger: TTGCATCTCCAGACTGTTCCAGAGAAGGTGCGGGGC...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAACAGCATGCCATGCGTaGTGGCCGGGCTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPTACHA*WPGLVH
Trigger: GTGAACCAAGCCCGGCCACCACGCATGGCATGCTGT...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTACCTGGCACAGAGGATaGGAAGAGGGGAGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPTWHRG*EEGSLH
Trigger: GTGAAGACTCCCCTCTTCCCATCCTCTGTGCCAGGT...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTAATGGACAGTGCCGGTaGCAGCTGAACCATACTCCC +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRNGQCR*QLNHTP
Trigger: GGGAGTATGGTTCAGCTGCCACCGGCACTGTCCATT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCCACTGCCCTGCTGTGTaGCTTATCCATGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSHCPAV*LIHALS
Trigger: GCTCAGAGCATGGATAAGCCACACAGCAGGGCAGTG...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTGGCCTTGATTCTTGCTaGCCGTGCATGGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPGLDSC*PCMVPG
Trigger: CCCTGGCACCATGCACGGCCAGCAAGAATCAAGGCC...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCCCAAGCACCGCAGTGTaGCACCGGGACCAGATGCAA +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSPSTAV*HRDQMQ
Trigger: TTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGTGGGCCAGTCCAGGGTaGTGGCTCAGGGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMWASPG*WLRAEN
Trigger: ATTCTCTGCCCTGAGCCACCACCCTGGACTGGCCCA...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGCAGTTCATCCTGCCATaGGCTCTGGTCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWQFILP*ALVSPS
Trigger: TGATGGGGAGACCAGAGCCCATGGCAGGATGAACTG...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGACCCCCAGAGTGTTCTaGCAGACCTGTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMTPRVF*QTCASW
Trigger: CCAGCTGGCACAGGTCTGCCAGAACACTCTGGGGGT...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGCCAGCCACATGGCCTTaGGAGTGTTACTTACTCCTG +
Preference number: 4 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQPATWP*ECYLLL
Trigger: CAGGAGTAAGTAACACTCCCAAGGCCATGTGGCTGG...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTCCACTGGCCTGCAGATaGGGCAGGATCCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSPLACR*GRILDL
Trigger: CAGGTCCAGGATCCTGCCCCATCTGCAGGCCAGTGG...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTACTAGGGACCACCACTaGGGTCACAAGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRTRDHH*GHKMAL
Trigger: CAAGGCCATCTTGTGACCCCAGTGGTGGTCCCTAGT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGTCCCTGACAGGTACCTaGGTTTCCCAGCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQSLTGT*VSQPLM
Trigger: CATCAAAGGCTGGGAAACCCAGGTACCTGTCAGGGA...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp GAGCCAAGCACAGCATGCCATGCGTGGTGGCCGGGCTaGGTTCACTTCAACAAGAACCAAAGCAAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: EPSTACHAWWPG*VHFNKNQSKVA
Trigger: GGCGACCTTGCTTTGGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCACTCCTGCCCACACTTTaGCACCGTGCACCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPLLPTL*HRAPKE
Trigger: CTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAG...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGGCAACAAGGTTGGCTaGGATGGCCTGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSGNKVG*DGLRQG
Trigger: ACCCTGTCTCAGGCCATCTCAGCCAACCTTGTTGCC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTTTGCCATCACATGGCTaGCCACCTCTGGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRLPSHG*PPLVRT
Trigger: TGTTCTCACCAGAGGTGGTCAGCCATGTGATGGCAA...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGCCAGCTCTCCACTCCTaGCCACACTTTGACACCGTG +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMPALHS*PHFDTV
Trigger: CACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGG...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGTGTGTGGCTTATCCATaGTCTGAGCTTGACAGACAG +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMCVAYP*SELDRQ
Trigger: CTGTCTGTCAAGCTCAGAGCATGGATAAGCCACACA...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGCAGGGTGCACTGCCCTaGTGTGTGGCTTATCCATGC +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMQGALP*CVAYPC
Trigger: GCATGGATAAGCCACACAGCAGGGCAGTGCACCCTG...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTGATTCTTGCTGGCCGTaGATGGTGCCAGGGTGCACT +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPDSCWP*MVPGCT
Trigger: AGTGCACCCTGGCACCATGCACGGCCAGCAAGAATC...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGGGCATCTCACACCACTaGATCACTTCTGGAAGACTA +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMGISHH*ITSGRL
Trigger: TAGTCTTCCAGAAGTGATGCAGTGGTGTGAGATGCC...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGATCAGGCACCCTGAATaGTTTCAGGTGGATGGTTTG +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMIRHPE*FQVDGL
Trigger: CAAACCATCCACCTGAAAGCATTCAGGGTGCCTGAT...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCCAGGGCTTTGCTGAGTaGCTGGCTCTGCCAATGGGA +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSQGFAE*LALPMG
Trigger: TCCCATTGGCAGAGCCAGGCACTCAGCAAAGCCCTG...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTCACGTGCTTGGGTACTaGCACCCTGACCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSHVLGY*HPDLQV
Trigger: GACCTGGAGGTCAGGGTGCCAGTACCCAAGCACGTG...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGCATGCCATGCGTGGTaGCCGGGCTTGGTTCACTTC +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSACHAW*PGLVHF
Trigger: GAAGTGAACCAAGCCCGGCCACCACGCATGGCATGC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGCCCCTGTGAGTACTTaGAACACAGGCCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPAPVST*NTGLRT
Trigger: GGTCCTCAGGCCTGTGTTCCAAGTACTCACAGGGGC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTAAGCAGGGCAGGGAGTaGGGAGAAATGCAACACAGA +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRKQGRE*GEMQHR
Trigger: TCTGTGTTGCATTTCTCCCCACTCCCTGCCCTGCTT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTGTTTGCTGTGTACGTTaGCCTGGGACCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRVCCVR*PGTSRL
Trigger: TAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAAC...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTATGCCAACAGGCCCAGTaGAGAGCAGATTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ACQVCKPFCLDSLIETALCQQAQ*RADLRW
Trigger: CCACCTCAAATCTGCTCTCCACTGGGCCTGTTGGCA...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTTGTCCTCACCAGGACTaGCAGGGGAAGCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTCPHQD*QGKPQG
Trigger: GCCCTGGGGCTTCCCCTGCCAGTCCTGGTGAGGACA...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACTTCAGGCATTTGGTGTaGAGGAATGGGTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDFRHLV*RNGWWD
Trigger: ATCCCACCACCCATTCCTCCACACCAAATGCCTGAA...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGACTGACCTCTCTTCCCTaGCACGATGCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGLTSLP*HDAVSL
Trigger: CAGGGAGACAGCATCGTGCCAGGGAAGAGAGGTCAG...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTTCCTGCCATGGGCTCTaGTCTCCCCATCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSSCHGL*SPHHPL
Trigger: CAGAGGGTGATGGGGAGACCAGAGCCCATGGCAGGA...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGTAAGCCTTTCTGCCTaGACAGCCTCATTGAGACAG +
Preference number: 4 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQVSLSA*TASLRQ
Trigger: CTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTAC...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGCAGGTGTTGCACAGTaGGGAATGGTGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSAGVAQ*GMVGAE
Trigger: CTCTGCACCCACCATTCCCCACTGTGCAACACCTGC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp TGGGAAGAGGGGAGTCTTCACTCTCTTCTGGTTCAGTaGTGGTGGGACAGTGTGCCTTCACGCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: WEEGSLHSLLVQ*WWDSVPSRPMQ
Trigger: CTGCATGGGGCGTGAAGGCACACTGTCCCACCACAACTGAACCAGAAGAGAGTGAAGACTCCCCTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp GTCATCAGGCACCCTGAATGCTTTCAGGTGGATGGTTaGGATCTCTCCTCACCTGGCTGGTCAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VIRHPECFQVDG*DLSSPGWSGQG
Trigger: TCCCTGGCCTGACCAGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAAGCATTCAGGGTGCCTGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGACTTCAGCTTCGCCTaGGAGTCCAGCAACAACTCC +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPDFSFA*ESSNNS
Trigger: GGAGTTGTTGCTGGACTCTCAGGCGAAGCTGAAGTC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGCCAGCTGGGTTCAGTaGCAGTTCATCCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSASWVQ*QFILPW
Trigger: CCATGGCAGGATGAACTGTCACTGAACCCAGCTGGC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCATACACCTGAGCGCCTaGCAGTACCCTCGTGAACCT +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSIHLSA*QYPREP
Trigger: AGGTTCACGAGGGTACTGTCAGGCGCTCAGGTGTAT...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTTCACTGTTGAGTTCATaGACTCTCAGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRSLLSS*TLRLEL
Trigger: GAGCTCCAGCCTGAGAGTTCATGAACTCAACAGTGA...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTTGTGGACCTAACAGGTaGCCACTGTCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPCGPNR*PLSRQG
Trigger: GCCTTGTCTGGACAGTGGTCACCTGTTAGGTCCACA...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGGATAGAAGTCTGTCTTaGGGTAGAGGAAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMDRSLS*GRGSQR
Trigger: TCTTTGGCTTCCTCTACCGCAAGACAGACTTCTATC...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCATGCAGCACCAAGGCCTaGGCGGCCCCGGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPCSTKA*AAPGGK
Trigger: CTTCCCGCCCGGGGCCGCGCAGGCCTTGGTGCTGCA...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCAATACTCGCCCACCTTaGTCAGGTTCACCAAAACGC +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSNTRPP*SGSPKR
Trigger: GCGTTTTGGTGAACCTGAGCAAGGTGGGCGAGTATT...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTCGAACAACTAGAACGTaGAAACAGGGCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPRTTRT*KQGSSL
Trigger: GAGACTGGAGCCCTGTTTGCACGTTCTAGTTGTTCG...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCACAGGCAAATGGACAGTaGCGGTGGCAGCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPQANGQ*RWQLNH
Trigger: ATGGTTCAGCTGCCACCGGCACTGTCCATTTGCCTG...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACGTATCTAGGGCCTTTTaGTCTCCTGTGATGATCGGA +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDVSRAF*SPVMIG
Trigger: TCCGATCATCACAGGAGAGCAAAAGGCCCTAGATAC...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAGTTCTGGCAGACCTGTaGCAGCTGGGTTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGVLADL*QLGSVT
Trigger: TGTCACTGAACCCAGCTGGCACAGGTCTGCCAGAAC...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCAGATCATCTCCAATGTaGCAGACCTGTGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSRSSPM*QTCAGQ
Trigger: TTGCCCAGCACAGGTCTGGCACATTGGAGATGATCT...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTGGGTGTGGTTGGTGTTaGTTTAAGTTTCTGGGGATA +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTGCGWC*FKFLGI
Trigger: TATCCCCAGAAACTTAAAGCAACACCAACCACACCC...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTTGGACTTTCAGCTCATaGCTCTGTGGCTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPWTFSS*LCGLPC
Trigger: GCAGGGCAAGCCACAGAGCCATGAGCTGAAAGTCCA...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAACATGCTGCCTGCAGTaGCTGGTTGCTGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGTCCLQ*LVAVET
Trigger: TGTCTCCACAGCAACCAGCCACTGCAGGCAGCATGT...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCCTGGTTCAGTTGTGGTaGGACAGTGTGCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSLVQLW*DSVPSR
Trigger: GCGTGAAGGCACACTGTCCCACCACAACTGAACCAG...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCTGGCTGTTCCTGCCATaGGGCCAATACCCAATACTA +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSWLFLP*GQYPIL
Trigger: TAGTATTGGGTATTGGCCCCATGGCAGGAACAGCCA...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGTGGGACTTAGTGGCTaGCCAAACTGCGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPVGLSG*PNCGCC
Trigger: ACAACAGCCGCAGTTTGGCCAGCCACTAAGTCCCAC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACCTGGTGGGCAAAGGTaGCCCTTCAGTGGAATCATT +
Preference number: 4 (lower is better)
Translates to: ACQVCKPFCLDSLIETALPGGQR*PFSGII
Trigger: AATGATTCCACTGAAGGGCCACCTTTGCCCACCAGG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTGAGGGCCTTGGAGCCTaGTGGGCAAAGGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTEGLGA*WAKVAL
Trigger: AAGGGCCACCTTTGCCCACCAGGCTCCAAGGCCCTC...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACGCAGCTGACGCCTCTTaGACACATTTCCACACAAAA +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDAADAS*THFHTK
Trigger: TTTTGTGTGGAAATGTGTCCAAGAGGCGTCAGCTGC...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGCCAAGCGCAGTGTTCTaGGCAGTGAGTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMPSAVF*AVSSLC
Trigger: GCACAGAGAACTCACTGCCCAGAACACTGCGCTTGG...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTTCTCCCTGTGCAAAGTaGGGACTTCAGGCATTTGGT +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPSPCAK*GLQAFG
Trigger: ACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGA...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCATGCCACAGAGAGTGTaGCATGGCCAGGACTGTACC +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSMPQRV*HGQDCT
Trigger: GGTACAGTCCTGGCCATGCCACACTCTCTGTGGCAT...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGACAAGGTTGGCTGAGATaGCCTGAGACAGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGQGWLR*PETGSL
Trigger: AAGGGACCCTGTCTCAGGCCATCTCAGCCAACCTTG...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGCACAAAGTGCACACTaGGAGGCAAGAGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSAQSAH*EARACL
Trigger: GAGACAGGCTCTTGCCTCCCAGTGTGCACTTTGTGC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTCTCTCCTCACCTGGCTaGTCAGGCCAGGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLLSSPG*SGQGGQ
Trigger: TTGTCCTCCCTGGCCTGACCAGCCAGGTGAGGAGAG...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp TTCCTGTCCTCTGGTAGACCCTTACCTGCCTGTGTCTaGCACAAAGTGCACACTGGGAGGCAAGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FLSSGRPLPACV*HKVHTGRQEPV
Trigger: GACAGGCTCTTGCCTCCCAGTGTGCACTTTGTGCAAGACACAGGCAGGTAAGGGTCTACCAGAGGACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp ACCCCAAACGCTGTCTCTTCCCTAAGGGTCACTGCCTaGGGATTTGCCTGCAGGCTAGGCACACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: TPNAVSSLRVTA*GFACRLGTPGK
Trigger: TTTACCAGGTGTGCCTAGCCTGCAGGCAAATCCCAAGGCAGTGACCCTTAGGGAAGAGACAGCGTTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTCACACACTTCAATaGCTTCAGCTTCGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRLHTLQ*LQLRLR
Trigger: TCTCAGGCGAAGCTGAAGTCATTGAAGTGTGTGAAG...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGAGCAAGAAGACCACGTaGATGCTCTCAAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWSKKTT*MLSKEV
Trigger: GACCTCTTTTGAGAGCATTCACGTGGTCTTCTTGCT...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTACATTTATAAGGGGATaGGCAAGAAGACCACGTGAA +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTTFIRG*ARRPRE
Trigger: TTCACGTGGTCTTCTTGCTCATCCCCTTATAAATGT...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTAAGTCAAAGATCTGACTaGGGAAGAAGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ACQVCKPFCLDSLIETALSQRSD*GRSRWP
Trigger: TGGCCACCTGCTTCTTCCTCAGTCAGATCTTTGACT...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTGAGGAAGGTGAGGACTaGAAAACTACATATCAGGTA +
Preference number: 4 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTEEGED*KTTYQV
Trigger: TACCTGATATGTAGTTTTTCAGTCCTCACCTTCCTC...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACTTTCTTCCCTCCCTCTaGGGTAAGACCAATCTGTTA +
Preference number: 4 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDFLPSL*GKTNLL
Trigger: TAACAGATTGGTCTTACCTCAGAGGGAGGGAAGAAA...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGCCTGGACAGCCTCATTaGGACAGCCCTAGACTAACA +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMPGQPH*DSPRLT
Trigger: TGTTAGTCTAGGGCTGTCTCAATGAGGCTGTCCAGG...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTCTTCCTACCAGGACATaGGAGCCCACAGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTLPTRT*EPTVAG
Trigger: CCCAGCCACTGTGGGCTCTCATGTCCTGGTAGGAAG...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCACGGGCGGGAAGCCCATaGGGTCCGATGGGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPRAGSP*GPMGGA
Trigger: TGCGCCACCCATCGGACCGCATGGGCTTCCCGCCCG...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTAAGGTTTTGAATACCTaGAGCACCAAGGCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPKVLNT*STKACA
Trigger: CGCGCAGGCCTTGGTGCTGCAGGTATTCAAAACCTT...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGCATGTGATCCCAATTTaGTGGGATATCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWHVIPI*WDILSC
Trigger: GCAGGAGAGGATATCCCAGCAAATTGGGATCACATG...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTGCTGTATTGAGATCTTaGCCAGTGCATTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRAVLRS*PVHSDQ
Trigger: CTGGTCTGAATGCACTGGGCAAGATCTCAATACAGC...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTAACTGTTCTCCCTCCTaGACTCTTCAGGGGCAAATA +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRNCSPS*TLQGQI
Trigger: TATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGATCTTCCCTGGCACGATaGTGTCTCCCTGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGSSLAR*CLPVQS
Trigger: ACTTTGCACAGGGAGACAGCATCGTGCCAGGGAAGA...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAAATGTGCCAGACCTGTaGTGGGCAACAAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPNVPDL*WATRLA
Trigger: AGCCAACCTTGTTGCCCAGCACAGGTCTGGCACATT...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCTCTAGACCCTCTGCCTaGCAGGTGTGTAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSSRPSA*QVCKPF
Trigger: GAAAGGCTTACACACCTGGCAGGCAGAGGGTCTAGA...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCGCCCATGCGGTCCGATaGGTGGCGCAGCAAGCGATA +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCAHAVR*VAQQAI
Trigger: TATCGCTTGCTGCGCCACCCATCGGACCGCATGGGC...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTTCAGTGTTGATCTTGTaGGTGAGCTTCCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPSVLIL*VSFPSM
Trigger: CATGGAAGGGAAGCTCACCCACAAGATCAACACTGA...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTCCACCACATAGCAGCTaGCCCCGCACCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTPPHSS*PRTFSG
Trigger: TCCAGAGAAGGTGCGGGGCCAGCTGCTATGTGGTGG...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTCGTGGTGGCCGGGCTTaGTTCACTTCAACAAGAACC +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSRGGRA*FTSTRT
Trigger: GGTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACG...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGCTTCTCAGGACTTGTaGCTGTCGAGCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSASQDL*LSSSAE
Trigger: CTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGCAGTGACCAGTCCCTaGAGAACAGGTAAGATTGGG +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSAVTSP*RTGKIG
Trigger: CCCAATCTTACCTGTTCTCCAGGGACTGGTCACTGC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCAGGGTGTGCCAGCTCTaGAGACTGGGCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCRVCQL*RLGQSR
Trigger: CCTGGACTGGCCCAGTCTCCAGAGCTGGCACACCCT...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGACCAACACCAAGGAGCTaGAATAGCTTTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGPTPRS*NSFAGW
Trigger: CCAGCCTGCAAAGCTATTCCAGCTCCTTGGTGTTGG...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGCTGTGTACGTTGGCCTaGGACCTCAAGGCTAGAATG +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMLCTLA*DLKARM
Trigger: CATTCTAGCCTTGAGGTCCCAGGCCAACGTACACAG...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCATACGCCTCTCCTTTCTaGCGGGTTATTTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPYASPF*RVISGP
Trigger: AGGGCCAGAAATAACCCGCCAGAAAGGAGAGGCGTA...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACAGGATCTCTCCTCACCTaGCTGGTCAGGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTGSLLT*LVRPGR
Trigger: CCTCCCTGGCCTGACCAGCCAGGTGAGGAGAGATCC...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTGGAGAGCAGTTATCTTaGGACAGAGATGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRGEQLS*DRDEAV
Trigger: AACTGCCTCATCTCTGTCCCAAGATAACTGCTCTCC...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp TCCCAGAAGCCCTTCAAGGTCAAAGCTTCTCAGGACTaGTGGCTGTCGAGCTCTGCTGAGCTGATGGACATG +
Preference number: 4 (lower is better)
Translates to: SQKPFKVKASQD*WLSSSAELMDM
Trigger: CATGTCCATCAGCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCTTCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp AACACAGGCCTGAGGACCTGTCTCATAATCTCGTCTTaGCACCTTGGCTGGAGTCAGTCAGCAGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: NTGLRTCLIISS*HLGWSQSAAMA
Trigger: AGCCATGGCTGCTGACTGACTCCAGCCAAGGTGCAAAGACGAGATTATGAGACAGGTCCTCAGGCCTGTGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp GTGTCAGACACGGCGTTATGTCCTGGAGGAAGCCCATaGCGAGGGCTCAGCAAAGTTAACAGCAGGTATGCA +
Preference number: 4 (lower is better)
Translates to: VSDTALCPGGSP*RGLSKVNSRYA
Trigger: TGCATACCTGCTGTTAACTTTGCTGAGCCCTCGCAATGGGCTTCCTCCAGGACATAACGCCGTGTCTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp GTCAGTGCAGCGGCAATGTCTGGGTTGTTGAGGGTTTaGATGGGTGATCAATGCTGGAGGATCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSAAAMSGLLRV*MGDQCWRILPL
Trigger: CAGAGGGAGGATCCTCCAGCATTGATCACCCATCAAAACCCTCAACAACCCAGACATTGCCGCTGCACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGATGGAGCGCTCCTTGTTaGTCTTGTCAATGTCGATGG +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGWSAPC*SCQCRW
Trigger: CCATCGACATTGACAAGATCAACAAGGAGCGCTCCA...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTCAGTGTTCTGGGCAGTaGGTTCTCTGTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLQCSGQ*VLCAAA
Trigger: AGCTGCTGCACAGAGAACTCACTGCCCAGAACACTG...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTACAAGCAATCACTGTTaGGTTCATGAACTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRTSNHC*VHELSG
Trigger: GCCTGAGAGTTCATGAACTCAACAGTGATTGCTTGT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAGCTGACCACCTCTGGTaGGAACACTGGAGAATAGTT +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGADHLW*EHWRIV
Trigger: AACTATTCTCCAGTGTTCTCACCAGAGGTGGTCAGC...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTTTGAGCCCAGAGGTTTaGGTCCAGTCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLLSPEV*VQSGQH
Trigger: GTGTTGCCCAGACTGGACTCAAACCTCTGGGCTCAA...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTAACGTACAGTGAAAAATaGCACCATCAAGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ACQVCKPFCLDSLIETALTYSEK*HHQARH
Trigger: GTGCCTGGCTTGATGGTGTCATTTTTCACTGTACGT...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTCAGCCATTCCTTGCTTaGCCTCATGCAAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSQPFLA*PHASTE
Trigger: CTCTGTGCTTGCATGAGGGCAAGCAAGGAATGGCTG...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCAAGCACAGCATGCCATaGGTGGTGGCCGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCKHSMP*VVAGLG
Trigger: ACCAAGCCCGGCCACCACGCATGGCATGCTGTGCTT...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTGCAAGTGGCTGTTCCTaGCATGGGGCCAATACCCAA +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLASGCS*HGANTQ
Trigger: TTGGGTATTGGCCCCATGGCAGGAACAGCCACTTGC...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGTGGGGAATGGTGGGTaGAGAGCTGGGTTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPVGNGG*RAGLVL
Trigger: TAAAACTAACCCAGCTCTGCACCCACCATTCCCCAC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACACCGAGTTTCCCCCACTaGATAGAGCCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTPSFPH*IEPGAR
Trigger: CCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGG...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGAGTCACCACGGCCCTaGACTCAGTTAATGCTCTAC +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSESPRP*TQLMLY
Trigger: GTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTCACAGGAGTCCTAGCTaGTCTGAAGTCGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLHRSPS*SEVVSG
Trigger: CCCACTCACGACTTCAGAGCAGCTAGGACTCCTGTG...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGTCAGGGTGGAAGGCCTaGTTCACCCTTGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMSGWKA*FTLERK
Trigger: CTTTCTTTCAAGGGTGAACCAGGCCTTCCACCCTGA...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACAATGCCCAAAAGGGCCTaGTCATACAGCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTMPKRA*SYSSAA
Trigger: GGCGGCCGAGCTGTATGACCAGGCCCTTTTGGGCAT...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCTTGCCAGGGGTTTACCCAGAAAGCCCAGCGCATACCCCCAGAGTGTTCTGGAAGAATTCCCCATGCTaGTGTTTGCTGTGTACGTTG +
Preference number: 4 (lower is better)
Translates to: SLPGVYPESPAHTPRVFWKNSPC*CLLCTL
Trigger: CAACGTACACAGCAAACACCAGCATGGGGAATTCTT...CCAGAACACTCTGGGGGTATGCGCTGGGCTTTCTGGGTAAACCCCTGGCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGAAGGTGGCCCTTCAGTaGAATCATTCCCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMKVALQ*NHSQLC
Trigger: GCAGAGTTGGGAATGATTCCACTGAAGGGCCACCTT...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAGAGTCACCAGCCACATaGCCTTGGGAGTGTTACTTA +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGESPAT*PWECYL
Trigger: TAAGTAACACTCCCAAGGCCATGTGGCTGGTGACTC...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTGAGGTCTCCACACACTaGGTCATTAGTACCCACAAG +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPEVSTH*VISTHK
Trigger: CTTGTGGGTACTAATGACCCAGTGTGTGGAGACCTC...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTAAATGGGAAAACGGTCTaGCATAAACAGACAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ACQVCKPFCLDSLIETALNGKTV*HKQTSP
Trigger: GGGGCTTGTCTGTTTATGCCAGACCGTTTTCCCATT...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTTGGTGGGTGCAGAGCTaGGTTAGTTTTAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPWWVQS*VSFSRG
Trigger: ACCTCTGCTAAAACTAACCCAGCTCTGCACCCACCA...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp GAGATGCAAGGTCAGGGTGGAAGGCCTGGTTCACCCTaGAAAGAAAGGATGGCTAGGGGTAAACAAGACGAG +
Preference number: 4 (lower is better)
Translates to: EMQGQGGRPGSP*KERMARGKQDE
Trigger: CTCGTCTTGTTTACCCCTAGCCATCCTTTCTTTCAAGGGTGAACCAGGCCTTCCACCCTGACCTTGCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp TGGGAAACAACCCCTAAGAATTCCCCATGCTGGTGTTaGCTGTGTACGTTGGCCTGGGACCTCAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: WETTPKNSPCWC*LCTLAWDLKAR
Trigger: TCTAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAACACCAGCATGGGGAATTCTTAGGGGTTGTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCATTCTGGAACTGCTCCTaGATCCTGGGAAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPFWNCS*ILGRIG
Trigger: ACCAATTCTTCCCAGGATTCAGGAGCAGTTCCAGAA...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGCACCCAGAGCCCCTGTaGGTACTTGGAACACAGGCC +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRHPEPL*VLGTQA
Trigger: GGCCTGTGTTCCAAGTACTCACAGGGGCTCTGGGTG...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTAGGACCCCTCATAGATaGCAAGAATTCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSRTPHR*QEFCSP
Trigger: TGGGGAGCAGAATTCTTGTCATCTATGAGGGGTCCT...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCCGAGTGGGAGGAAGGTaGGGACTGAAAAACTACATA +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSRVGGR*GLKNYI
Trigger: TATGTAGTTTTTCAGTCCTCACCTTCCTCCCACTCG...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACCTGGCTGTGGCCCCTTaGATGGTGGCAGGGAGACCA +
Preference number: 4 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHLAVAP*MVAGRP
Trigger: TGGTCTCCCTGCCACCATTCAAGGGGCCACAGCCAG...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACATCTTGGGACAGAGATaGGGCAGTTGGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHILGQR*GSWRGG
Trigger: CCCGCCCCGCCAACTGCCTCATCTCTGTCCCAAGAT...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCACCGAGGATAAGGCTCTaGCTCCCCACCGGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPPRIRL*LPTGEG
Trigger: ACCCTCGCCGGTGGGGAGGCAGAGCCTTATCCTCGG...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCAGGGCCACTGAGACCTaGTTTCCCTTCACCACGTGC +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCRATET*FPFTTC
Trigger: GCACGTGGTGAAGGGAAAGCAGGTCTCAGTGGCCCT...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTTGGGATATCCTCTCCTaGATTTCAAACACCTTCACT +
Preference number: 4 (lower is better)
Translates to: KSLECREPRRAAEDKALPWDILS*ISNTFT
Trigger: AGTGAAGGTGTTTGAAATGCAGGAGAGGATATCCCA...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACAGGCTCCAGTCTCCACTaGTCTGACCATGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTGSSLH*SDHEAE
Trigger: CTCAGCCTCATGGTCAGAGCAGTGGAGACTGGAGCC...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTCAGCAAACGCCAGCTTaGCAGGGGTTTACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLQQTPA*QGFTQK
Trigger: TTTCTGGGTAAACCCCTGGCAAGCTGGCGTTTGCTG...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTGCCTCCTGTGAACCATaGGCCATTTCCTTCACAGGG +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTASCEP*AISFTG
Trigger: CCCTGTGAAGGAAATGGCCCATGGTTCACAGGAGGC...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGGGTTATTTCTGGCCCTaGGAGTATGCTAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMGYFWP*EYARQF
Trigger: GAATTGCCTAGCATACTCCCAGGGCCAGAAATAACC...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTCTGGCGGGTTATTTCTaGCCCTGGGAGTATGCTAGG +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTLAGYF*PWEYAR
Trigger: CCTAGCATACTCCCAGGGCCAGAAATAACCCGCCAG...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACACCACTGCATAGAGCCTaGTGCCAGGGAAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTPLHRA*CQGRQA
Trigger: AGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGG...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAGGTTTGAGTCCAGTCTaGGCAACACAGGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPGLSPV*ATQEKL
Trigger: GAGTTTTTCCTGTGTTGCCCAGACTGGACTCAAACC...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCAAGCCCCAGGGCTTTGTaGCCCTGTCCCTATGGGGCA +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPSPRAL*PCPYGA
Trigger: TGCCCCATAGGGACAGGGTCACAAAGCCCTGGGGCT...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTCAAAAGCTTAAGAAGTaGCTCTTGCCATCACATGGC +
Preference number: 4 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPQKLKK*LLPSHG
Trigger: GCCATGTGATGGCAAGAGTCACTTCTTAAGCTTTTG...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGTGTTCAGGAGGCTGCTaGCTGTCCAGGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRCSGGC*LSRALL
Trigger: CAGCAAAGCCCTGGACAGTCAGCAGCCTCCTGAACA...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCGGAGGAAAGACATGCTaGCTGCAGTGGCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCGGKTC*LQWLVA
Trigger: AGCAACCAGCCACTGCAGGCAGCATGTCTTTCCTCC...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAAGAAGACCACGTGAATaGTCTCAAAAGAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPRRPRE*SQKRSR
Trigger: CCTTGACCTCTTTTGAGAGCATTCACGTGGTCTTCT...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTTTCCCTAAGGGTCACTaGCTTGGGATTTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTFPKGH*LGICLQ
Trigger: CTGCAGGCAAATCCCAAGGCAGTGACCCTTAGGGAA...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTCCTATTCTACCTCCTTaGCTGGCTGTCCCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTPILPP*LAVPSL
Trigger: TAAGGAGGGGACAGCCAGGCAAGGAGGTAGAATAGG...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGCTGAGTGCCTGGCTCTaGCAATGGGAGGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRLSAWL*QWEVTS
Trigger: GCTGGTAACCTCCCATTGGCAGAGCCAGGCACTCAG...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACACTTCTCCCTCCAGGATaGCGTTCCACCAATACTCGC +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTLLPPG*RSTNTR
Trigger: GCGAGTATTGGTGGAACGCCATCCTGGAGGGAGAAG...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTTCTTGTCAATGTCGATaGGCTCTTCTCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLSCQCR*ALLPPG
Trigger: TCCTGGAGGGAGAAGAGCCCATCGACATTGACAAGA...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACCCACCAGACAGCGTaGCTCAACGGGAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHTHQTA*LNGSKA
Trigger: CGCCTTGCTCCCGTTGAGCCACGCTGTCTGGTGGGT...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCACTCTCCTCGGGCCCTaGACAAGGGAAATGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCTLLGP*TREMSH
Trigger: GTGACTCATTTCCCTTGTCCAGGGCCCGAGGAGAGT...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTCTTGCTCTTTGGTTCTaGGGAGGAGCGCAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTLALWF*GGAQSD
Trigger: GTCACTTTGCGCTCCTCCCCAGAACCAAAGAGCAAG...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTTGTACCTGGGGCAGATaGTCTTGCTCTTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLCTWGR*SCSLVL
Trigger: CAGAACCAAAGAGCAAGACCATCTGCCCCAGGTACA...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAGCCACCTGGGAGACTTCTGTGTCAGACACGGCGTTATGTCCTGGAGGAAGCTTAGAAATGTCACCCTaGAGTCACAAAATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PATWETSVSDTALCPGGSLEMSP*SHKIPS
Trigger: AGAAGGGATTTTGTGACTCCAGGGTGACATTTCTAA...GCTTCCTCCAGGACATAACGCCGTGTCTGACACAGAAGTCTCCCAGGTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTTTCAGGTGGATGGTTTaGATCTCTCCTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLFRWMV*ISPHLA
Trigger: AGCCAGGTGAGGAGAGATCCAAACCATCCACCTGAA...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACACATGAGAGCCCACAGTaGCTGGGGTCTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTHESPQ*LGSCHQ
Trigger: CTGATGACAAGACCCCAGCCACTGTGGGCTCTCATG...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGAAAATGACCATATCATaGAAAATTCTGGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMKMTIS*KILESS
Trigger: ACTGCTCTCCAGAATTTTCCATGATATGGTCATTTT...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGTGGGTACTGGCACCCTaGCCTCCAGGTCAGTATAGT +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRWVLAP*PPGQYS
Trigger: ACTATACTGACCTGGAGGTCAGGGTGCCAGTACCCA...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACGCTGTCGAGCTCTGCTaGGCTGATGGACATGCTGTG +
Preference number: 4 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHAVELC*ADGHAV
Trigger: CACAGCATGTCCATCAGCTCAGCAGAGCTCGACAGC...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCTCTCTGTGCAGCAGCTaGCGCCTCTTGGACACATTT +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCSLCSS*RLLDTF
Trigger: AAATGTGTCCAAGAGGCGTCAGCTGCTGCACAGAGA...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACAAATACACGTACAGTaGAAAATGACACCATCAAGC +
Preference number: 4 (lower is better)
Translates to: ACQVCKPFCLDSLIETALQIHVQ*KMTPSS
Trigger: GCTTGATGGTGTCATTTTTCACTGTACGTGTATTTG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTACGCAGACCCAGAACTaGTTAAATACCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRTQTQN*LNTNLL
Trigger: CAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGAGCCAGGCACAGTGGTaGACACTTACAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRSQAQW*TLTVPA
Trigger: AGCTGGGACTGTAAGTGTGCACCACTGTGCCTGGCT...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTTTCTTCAGCATCTCATaGACTTTCAGCTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSFFSIS*TFSSWL
Trigger: GAGCCATGAGCTGAAAGTCCATGAGATGCTGAAGAA...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGGTTTCCTTTCCTTCTaGTCATTAAAACTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSGFLSF*SLKLHS
Trigger: GCTGTGCAGTTTTAATGACCAGAAGGAAAGGAAACC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCGCCCATCCAATTCTGTaGTGGAGTCAATCTCTATTT +
Preference number: 4 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSAHPIL*WSQSLF
Trigger: AAATAGAGATTGACTCCACCACAGAATTGGATGGGC...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACACATTTTCCTCCAGCATaGCCACACGAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTHFPPA*PHEWSC
Trigger: GCAGCTCCATTCGTGTGGCCATGCTGGAGGAAAATG...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGTCGAGGAGTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTTGCTGTCTGCTTCACCAGCTCAGTaGCAAATATCAGACAACAAG +
Preference number: 4 (lower is better)
Translates to: CRGVTTALHSVNALLLLSASPAQ*QISDNK
Trigger: CTTGTTGTCTGATATTTGCCACTGAGCTGGTGAAGC...AGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGACTCCTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CCACCTCTGGTGAGAACACTGGAGAATAGTTTAGGGGTGCCCGAGTTTCCCCCAATCCTAGGACCTCAATaGGAAGAACTCCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PPLVRTLENSLGVPEFPPILGPQ*EELQEK
Trigger: TTTTTCCTGGAGTTCTTCCCATTGAGGTCCTAGGAT...TGGGGGAAACTCGGGCACCCCTAAACTATTCTCCAGTGTTCTCACCAGAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTTTTGGTGTGGAGGAATaGGTGGTGGGATTGAAAACC +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLFGVEE*VVGLKT
Trigger: GGTTTTCAATCCCACCACCCATTCCTCCACACCAAA...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCGATGGTCTTGCTCTTTaGTTCTGGGGAGGAGCGCAA +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCDGLAL*FWGGAQ
Trigger: TTGCGCTCCTCCCCAGAACCAAAGAGCAAGACCATC...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCACTCTTGCCATCACATaGCTGACCACCTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCTLAIT*LTTSGE
Trigger: CTCACCAGAGGTGGTCAGCCATGTGATGGCAAGAGT...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp GTCACCACGGCCCTGCACTCAGTTAATGCTCTACTGTaGCTGTCTGGATATCACTTGACTTTTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VTTALHSVNALL*LSGYHLTFGCG
Trigger: ACCACACCCAAAAGTCAAGTGATATCCAGACAGCAACAGTAGAGCATTAACTGAGTGCAGGGCCGTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCGTCAGTATAGTCCTGTaGCCAGGTGTAGTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCVSIVL*PGVVLS
Trigger: CGAGAGAACTACACCTGGTCACAGGACTATACTGAC...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAACCTCGTGAACCTGCCTaGGGGTGGCCACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQPREPA*GWPHSH
Trigger: GTGGGAATGTGGCCACCCTCAGGCAGGTTCACGAGG...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGAGGCGGCATACACCTaGGCGCCTGACAGTACCCTC +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQEAAYT*APDSTL
Trigger: GAGGGTACTGTCAGGCGCTCAGGTGTATGCCGCCTC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCAGGAAATCCTGGACGTTaGCCACGTGCTGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPGNPGR*PRAAGC
Trigger: GCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCC...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAGGGAGTGGGGAGAAATaGAACACAGAATATAAAATC +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGGSGEK*NTEYKI
Trigger: GATTTTATATTCTGTGTTGCATTTCTCCCCACTCCC...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTCCTAAGAATTCCCCATaGTGGTGTTTGCTGTGTACG +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTPKNSP*WCLLCT
Trigger: CGTACACAGCAAACACCAGCATGGGGAATTCTTAGG...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTGTGCTGACAACTTCGTaGTTTTCATCGACAAAGCGA +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLVLTTS*FSSTKR
Trigger: TCGCTTTGTCGATGAAAAGCACGAAGTTGTCAGCAC...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCAGTGGGCCACATGGGCTaGTTGACCTCTGACCACCAA +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPVGHMG*LTSDHQ
Trigger: TTGGTGGTCAGAGGTCAAGCAGCCCATGTGGCCCAC...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCGTGTGTAAGCCTTTCTaGCTGGACAGCCTCATTGAG +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCVCKPF*LDSLIE
Trigger: CTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACAC...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTACTACCAGGTCCACCTaGTTTAGGTATACCTTCCTA +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLTTRST*FRYTFL
Trigger: TAGGAAGGTATACCTAAAGCAGGTGGACCTGGTAGT...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCTTCTCTGGAACAGTCTaGAGATGCAAGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCFSGTV*RCKVRV
Trigger: CACCCTGACCTTGCATCTCCAGACTGTTCCAGAGAA...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACGACTGGAACTGGGACTaGCTCCTTCTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHDWNWD*LLLSCS
Trigger: GCTGCAGCTGAGAAGGAGCCAGTCCCAGTTCCAGTC...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGTTCCTTCACAGGGCCTaGAGGCTGCACTTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRFLHRA*RLHFLY
Trigger: GTAGAGAAAGTGCAGCCTCCAGGCCCTGTGAAGGAA...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACAAAAGAGGACGTCTTATaGGGAGCCAAGCACAGCATG +
Preference number: 4 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTKEDVL*GAKHSM
Trigger: CATGCTGTGCTTGGCTCCCCATAAGACGTCCTCTTT...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCATCGGACCTCAGCTGGTaGGACTTAGTGGCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPSDLSW*DLVAGQ
Trigger: TTGGCCAGCCACTAAGTCCCACCAGCTGAGGTCCGA...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGATGGGTGATCAATGCTaGAGGATCCTCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRMGDQC*RILPLP
Trigger: AGGCAGAGGGAGGATCCTCCAGCATTGATCACCCAT...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGTCACTCAGGGGTGCTaGAATCTTCCCCACCTTAAG +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRVTQGC*NLPHLK
Trigger: CTTAAGGTGGGGAAGATTCCAGCACCCCTGAGTGAC...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTATGCTTTCAGGTGGATaGTTTGGATCTCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTMLSGG*FGSLLT
Trigger: GGTGAGGAGAGATCCAAACCATCCACCTGAAAGCAT...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGGCTGGACCTGGCTGTaGCCCCTTGAATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQGWTWL*PLEWWQ
Trigger: CTGCCACCATTCAAGGGGCCACAGCCAGGTCCAGCC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACCAGCAGGAGAGCCTaGAGTGTCGAGGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHTSRRA*SVEESP
Trigger: TGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGT...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCAGCCTGGCTCTGCCAATaGGAGGTTACCAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPAWLCQ*EVTSRR
Trigger: TCTCCTGCTGGTAACCTCCCATTGGCAGAGCCAGGC...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTaGGACCCACAGAAGACTTCCCAGGAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: AFCSPVMIGATC*DPQKTSQECFL
Trigger: AAGAAAGCATTCCTGGGAAGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACTGCCTTCACGCCCCATaGAGAAATTCCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHCLHAP*RNSSSP
Trigger: GGGAGAGGAGGAATTTCTGCATGGGGCGTGAAGGCA...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAACAAAATCCCTTCTTTaGATTACCAAAAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGTKSLL*ITKRGG
Trigger: ACCACCTCTTTTGGTAATGCAAAGAAGGGATTTTGT...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGCAGGGTCGAATCGCTaGCCTCGGAAGGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQAGSNR*PRKGEP
Trigger: AGGTTCTCCCTTCCGAGGCCAGCGATTCGACCCTGC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCAGCTGGGCAACAAGGTTaGCTGAGATGGCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPAGQQG*LRWPET
Trigger: TGTCTCAGGCCATCTCAGCCAACCTTGTTGCCCAGC...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCTGCAGCGGCAATGTCTaGGTTGTTGAGGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCCSGNV*VVEGFD
Trigger: ATCAAAACCCTCAACAACCCAGACATTGCCGCTGCA...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGGGCTGCTTGACCTCTaGCCACCAAGGAGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQGLLDL*PPRREF
Trigger: AAACTCCCTCCTTGGTGGTCAGAGGTCAAGCAGCCC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCTGTCTGGATATCACTTaGCTTTTGGGTGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LLWRQKHVIPICWDILSCCLDIT*LLGVVG
Trigger: ACCAACCACACCCAAAAGTCAAGTGATATCCAGACA...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAATGTGGTGGGACAGTGTaGCTTCACGCCCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQCGGTV*LHAPCR
Trigger: TCTGCATGGGGCGTGAAGGCACACTGTCCCACCACA...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp ACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGGGCAAATACGCCTCTCCTTACCTCAAGGCTAGAATaGAACAATAATGACCATGCA +
Preference number: 4 (lower is better)
Translates to: TSQLFSLLHSSGANTPLLTSRLE*NNNDHA
Trigger: TGCATGGTCATTATTGTTGCATTCTAGCCTTGAGGT...AAGGAGAGGCGTATTTGCCCCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACACTGCTCCTGAATCCTaGGAAGAATTGGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHTAPES*EELVVP
Trigger: GGGAACCACCAATTCTTCCCAGGATTCAGGAGCAGT...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAACAGCAGGTATGCACCTaGAGACCAAGGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQQQVCT*RPRRAL
Trigger: CAAGGCCCTCCTTGGTCTCCAGGTGCATACCTGCTG...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGGAGCGCAAAGTGACTaGGCTCAGGTGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQGAQSD*AQVKEL
Trigger: CAGCTCCTTCACCTGAGCCCAGTCACTTTGCGCTCC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACGATTCCTCTCTGAGCTaGAGGTGGAAGCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHDSSLS*RWKQMG
Trigger: TCCCATTTGCTTCCACCTCCAGCTCAGAGAGGAATC...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACGTCACAAGATGGCCTTaGTCCCCAGTTATCTGGATC +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHVTRWP*SPVIWI
Trigger: GATCCAGATAACTGGGGATCAAGGCCATCTTGTGAC...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGGCACACCTGGTAAATaGGGTCTCCACACACTGGGT +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQGTPGK*GLHTLG
Trigger: ACCCAGTGTGTGGAGACCTCATTTACCAGGTGTGCC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCATCGGAGCAACATGTTTaGACCCACAGAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPSEQHV*THRRLP
Trigger: GGGAAGTCTTCTGTGGGTCCAAACATGTTGCTCCGA...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACGGAGACAAAAGCATGTaGTCCCAATTTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHGDKSM*SQFAGI
Trigger: TATCCCAGCAAATTGGGATCACATGCTTTTGTCTCC...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGTGTCTTGCACAAAGTaGACACTGGGAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQVSCTK*TLGGKS
Trigger: GCTCTTGCCTCCCAGTGTGCACTTTGTGCAAGACAC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACTCAATCTCTATTTCCTaGACTGGAACTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHSISIS*TGTGTG
Trigger: GCCAGTCCCAGTTCCAGTCCAGGAAATAGAGATTGA...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACAATCCTGGGAAGAATTaGTGGTTCCCTAGGGACTTC +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHNPGKN*WFPRDF
Trigger: GAAGTCCCTAGGGAACCACCAATTCTTCCCAGGATT...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCAAGTGGCTGGTTGCTGTaGAGACAAAAGCATGTGATC +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPSGWLL*RQKHVI
Trigger: GATCACATGCTTTTGTCTCCACAGCAACCAGCCACT...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGTTTCTAAAGCTGTATTaGGATCTTGCCCAGTGCATT +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRFLKLY*DLAQCI
Trigger: AATGCACTGGGCAAGATCTCAATACAGCTTTAGAAA...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAAAGGTGATTCCTCTCTaGGCTGGAGGTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQKVIPL*AGGGSK
Trigger: TTTGCTTCCACCTCCAGCTCAGAGAGGAATCACCTT...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCACCCAACCAGAAGACATaGAAGCAGAATAGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPPNQKT*KQNSVK
Trigger: TTTGACGCTATTCTGCTTGCATGTCTTCTGGTTGGG...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACAATCATTCCCAACTCTaGACTCACCCTAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHNHSQL*THPKLS
Trigger: GGAAAGCTTAGGGTGAGTGCAGAGTTGGGAATGATT...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGCATCCAATTCTGTGGTaGAGTCAATCTCTATTTCCT +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRHPILW*SQSLFP
Trigger: AGGAAATAGAGATTGACTCCACCACAGAATTGGATG...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACGTGATCCCAATTTGCTaGGATATCCTCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHVIPIC*DILSCI
Trigger: AATGCAGGAGAGGATATCCCAGCAAATTGGGATCAC...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAACATTACCAAAAGAGGTaGTCACTCAGGGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQHYQKR*SLRGAG
Trigger: TCCAGCACCCCTGAGTGACCACCTCTTTTGGTAATG...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
3UTR CAA 72 bp CACTGGTCAAAATCTTACAGGATTTCTAAAGCTGTATaGAGATCTTGCCCAGTGCATTCAGACCAGATGGGA +
Preference number: 4 (lower is better)
Translates to: HWSKSYRISKAV*RSCPVHSDQMG
Trigger: TCCCATCTGGTCTGAATGCACTGGGCAAGATCTCAATACAGCTTTAGAAATCCTGTAAGATTTTGACCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR TCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAATGTGGTCAAAGGTTTTaGATACCTGCAGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQCGQRF*IPAAPR
Trigger: CCTTGGTGCTGCAGGTATTCAAAACCTTTGACCACA...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR GCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAATTAAGAAGTGACTCTTaGCATCACATGGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQLRSDS*HHMADH
Trigger: GTGGTCAGCCATGTGATGGCAAGAGTCACTTCTTAA...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGATCATGCTGATTACCTaGGTGACAAAATTATCTGTA +
Preference number: 4 (lower is better)
Translates to: THFHTKHFSTVLPPALFRIMLIT*VTKLSV
Trigger: TACAGATAATTTTGTCACCCAGGTAATCAGCATGAT...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAACTGAATGCTTTCAGGTaGATGGTTTGGATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQLNAFR*MVWISP
Trigger: AGGAGAGATCCAAACCATCCACCTGAAAGCATTCAG...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCATCTACTGTTGCTGTCTaGATATCACTTGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPSTVAV*ISLDFW
Trigger: CCAAAAGTCAAGTGATATCCAGACAGCAACAGTAGA...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp AATGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACTATCATGGAAAATTCTaGAGAGCAGTTATCTTGGGA +
Preference number: 4 (lower is better)
Translates to: NATIMTMHRQNCLSSKCHYHGKF*RAVILG
Trigger: TCCCAAGATAACTGCTCTCCAGAATTTTCCATGATA...GTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CCA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAATATCACTTGACTTTTaGGTGTGGTTGGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: QMSHADPELLKYQFIANQISLDF*VWLVLL
Trigger: AAGCAACACCAACCACACCCAAAAGTCAAGTGATAT...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS GCA 90 bp ATACCTGCAGCACCAAGGCCTGCGCGGCCCCGGGCGGGAAGCCCATaGGGTCCGATGGGTGGCGCAGCAAGCGATAGAAGTCTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: IPAAPRPARPRAGSP*GPMGGAASDRSLSC
Trigger: GCAAGACAGACTTCTATCGCTTGCTGCGCCACCCATCGGACCGCATGGGCTTCCCGCCCGGGGCCGCGCAGGCCTTGGTGCTGCAGGTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS GCA 90 bp ACAACTGCAGCACCAAGGCCTGCGCGGCCCCGGGCGGGAAGCCCATaGGGTCCGATGGGTGGCGCAGCAAGCGATAGAAGTCTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: TTAAPRPARPRAGSP*GPMGGAASDRSLSC
Trigger: GCAAGACAGACTTCTATCGCTTGCTGCGCCACCCATCGGACCGCATGGGCTTCCCGCCCGGGGCCGCGCAGGCCTTGGTGCTGCAGTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464812.1
CDS CCA 90 bp CACCAAGGCCTGCGCGGCCCCGGGCGGGAAGCCCATGCGGTCCGATaGGTGGCGCAGCAAGCGATAGAAGTCTGTCTTGCGGTAGAGGAA +
Preference number: 5 (lower is better)
Translates to: HQGLRGPGREAHAVR*VAQQAIEVCLAVEE
Trigger: TTCCTCTACCGCAAGACAGACTTCTATCGCTTGCTGCGCCACCCATCGGACCGCATGGGCTTCCCGCCCGGGGCCGCGCAGGCCTTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS CCA 90 bp AAATCCTGGACGTTGCCCACGTGCTGCAGGATGCCCAAAAGGGCCTaGTCATACAGCTCGGCCGCCCCTGTCTCCATGTCGCCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: KSWTLPTCCRMPKRA*SYSSAAPVSMSPPA
Trigger: GGCGGGAGGCGACATGGAGACAGGGGCGGCCGAGCTGTATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS TCA 90 bp TGTAAATGTCCTTCCTTCTGTCTGGCCTGCATGGATTTCGCTCCCTaGCTAGCGGCCCCCAGCACCGTGAGGGGTACGCGCTGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: CKCPSFCLACMDFAP*LAAPSTVRGTRWRV
Trigger: CACCCGCCAGCGCGTACCCCTCACGGTGCTGGGGGCCGCTAGTCAGGGAGCGAAATCCATGCAGGCCAGACAGAAGGAAGGACATTTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS GCA 90 bp AGAGAACGCGCAGGAAATCCTGGACGTTGCCCACGTGCTGCAGGATaGCCAAAAGGGCCTGGTCATACAGCTCGGCCGCCCCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RERAGNPGRCPRAAG*PKGPGHTARPPLSP
Trigger: TGGAGACAGGGGCGGCCGAGCTGTATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCTGCGCGTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS-3UTR CAA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGGCCCCCGGGGAGATGTaGAACATGGCAGGGTCGAAT +
Preference number: 5 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMAPGEM*NMAGSN
Trigger: ATTCGACCCTGCCATGTTCAACATCTCCCCGGGGGC...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS GCA 90 bp AAGCCAAAGAGAACGCGCAGGAAATCCTGGACGTTGCCCACGTGCTaGAGGATGCCCAAAAGGGCCTGGTCATACAGCTCGGCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: KPKRTRRKSWTLPTC*RMPKRAWSYSSAAP
Trigger: AGGGGCGGCCGAGCTGTATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCTGCGCGTTCTCTTTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS GCA 90 bp AGGAAGCCAAAGAGAACGCGCAGGAAATCCTGGACGTTGCCCACGTaGTGCAGGATGCCCAAAAGGGCCTGGTCATACAGCTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: RKPKRTRRKSWTLPT*CRMPKRAWSYSSAA
Trigger: GGCGGCCGAGCTGTATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCTGCGCGTTCTCTTTGGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS CCA 90 bp AGTCACCCCGCTTTCCTCGGACCTCAGCTGGTGGGACTTAGTGGCTaGCCAAACTGCGGCTGTTGTGTCAAGAGCTCCTCGCTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: SHPAFLGPQLVGLSG*PNCGCCVKSSSLRG
Trigger: CCCTCTGAGCGAGGAGCTCTTGACACAACAGCCGCAGTTTGGCCAGCCACTAAGTCCCACCAGCTGAGGTCCGAGGAAAGCGGGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487118.1
CDS TCA 90 bp GAAGAGCCCCACAGCACACAGGCCTGGCCGTCCACTTCATCGCTGTaGCCTGGGTTCTTTGCTTTGCCTCTCAGGACTGGATGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: EEPHSTQAWPSTSSL*PGFFALPLRTGWGF
Trigger: GAAGCCCCATCCAGTCCTGAGAGGCAAAGCAAAGAACCCAGGTCACAGCGATGAAGTGGACGGCCAGGCCTGTGTGCTGTGGGGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS-3UTR CAA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACGCGTGGTGGCCGGGCTaGGTTCACTTCAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDAWWPG*VHFNKN
Trigger: GTTCTTGTTGAAGTGAACCAAGCCCGGCCACCACGC...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGGCGGCAATGTCTGGGTaGTTGAGGGTTTTGATGGGT +
Preference number: 5 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLAAMSG*LRVLMG
Trigger: ACCCATCAAAACCCTCAACAACCCAGACATTGCCGC...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGTTTCAGGTGGATGGTTaGGATCTCTCCTCACCTGGC +
Preference number: 5 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLFQVDG*DLSSPG
Trigger: GCCAGGTGAGGAGAGATCCAAACCATCCACCTGAAA...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CCAAGCACCGCAGTGTGGCACCGGGACCAGATGCAAGTGGCTGTTCCTGCCATGGAGGATGACGTGTATTaGAGGGGGCAGGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PSTAVWHRDQMQVAVPAMEDDVY*RGQGSP
Trigger: TGGAGAACCCTGCCCCCTCAAATACACGTCATCCTC...CATGGCAGGAACAGCCACTTGCATCTGGTCCCGGTGCCACACTGCGGTGCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS GCA 90 bp CACACAGGCCTGGCCGTCCACTTCATCGCTGTGACCTGGGTTCTTTaGTTTGCCTCTCAGGACTGGATGGGGCTTCAATGGGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: HTGLAVHFIAVTWVL*FASQDWMGLQWVSP
Trigger: GGGTGAGACCCATTGAAGCCCCATCCAGTCCTGAGAGGCAAAGCAAAGAACCCAGGTCACAGCGATGAAGTGGACGGCCAGGCCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS-3UTR CAA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGAGGCACAGCCATTCCTaGCTTGCCCTCATGCAAGCA +
Preference number: 5 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQRHSHS*LALMQA
Trigger: TGCTTGCATGAGGGCAAGCAAGGAATGGCTGTGCCT...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGACTCCTGCCCACACTTaGACACCGTGCACCCAAAGA +
Preference number: 5 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQTPAHT*TPCTQR
Trigger: TCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGT...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACTGGGTTTCCCAGCCTTaGATGACCCCAAACGCTGTC +
Preference number: 5 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDWVSQP*MTPNAV
Trigger: GACAGCGTTTGGGGTCATCAAAGGCTGGGAAACCCA...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS GCA 90 bp CCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTaGCTCCCCACCGGCGAGGGTTTCCTTTCCTTCTGGTCATTAAAA +
Preference number: 5 (lower is better)
Translates to: PWNAGSQEGQPRIRL*LPTGEGFLSFWSLK
Trigger: TTTTAATGACCAGAAGGAAAGGAAACCCTCGCCGGTGGGGAGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338427.10
ENST00000355451.8
ENST00000460110.5
ENST00000475952.1
ENST00000493613.5
CDS GCA 90 bp TGCGGTAGAGGAAGCCAAAGAGAACGCGCAGGAAATCCTGGACGTTaGCCACGTGCTGCAGGATGCCCAAAAGGGCCTGGTCATACAGCT +
Preference number: 5 (lower is better)
Translates to: CGRGSQRERAGNPGR*PRAAGCPKGPGHTA
Trigger: AGCTGTATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCTGCGCGTTCTCTTTGGCTTCCTCTACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS GCA 90 bp CCATGCGGTCCGATGGGTGGCGCAGCAAGCGATAGAAGTCTGTCTTaGGGTAGAGGAAGCCAAAGAGAACGCGCAGGAAATCCTGGACGT +
Preference number: 5 (lower is better)
Translates to: PCGPMGGAASDRSLS*GRGSQRERAGNPGR
Trigger: ACGTCCAGGATTTCCTGCGCGTTCTCTTTGGCTTCCTCTACCGCAAGACAGACTTCTATCGCTTGCTGCGCCACCCATCGGACCGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS GCA 90 bp AGGCCTGGCCGTCCACTTCATCGCTGTGACCTGGGTTCTTTGCTTTaGCTCTCAGGACTGGATGGGGCTTCAATGGGTCTCACCCATGAC +
Preference number: 5 (lower is better)
Translates to: RPGRPLHRCDLGSLL*LSGLDGASMGLTHD
Trigger: GTCATGGGTGAGACCCATTGAAGCCCCATCCAGTCCTGAGAGGCAAAGCAAAGAACCCAGGTCACAGCGATGAAGTGGACGGCCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS CCA 90 bp AATCGGTTAGCATGCGGTACTTATAGGACATGGCTCCCTGCTCCATaGAAGAGCCCCACAGCACACAGGCCTGGCCGTCCACTTCATCGC +
Preference number: 5 (lower is better)
Translates to: NRLACGTYRTWLPAP*KSPTAHRPGRPLHR
Trigger: GCGATGAAGTGGACGGCCAGGCCTGTGTGCTGTGGGGCTCTTCCATGGAGCAGGGAGCCATGTCCTATAAGTACCGCATGCTAACCGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS-3UTR CAA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACGCCATGGAGCGCTCCTaGTTGATCTTGTCAATGTCG +
Preference number: 5 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDAMERS*LILSMS
Trigger: CGACATTGACAAGATCAACAAGGAGCGCTCCATGGC...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TCCAGTGGGCACTCCCCAGGGCAGCAGCCTGGTTTAAATGCCTGTTCCCCAGACCAATACTCGCCCACCTaGCTCAGGTTCACCAAAACG +
Preference number: 5 (lower is better)
Translates to: SSGHSPGQQPGLNACSPDQYSPT*LRFTKT
Trigger: CGTTTTGGTGAACCTGAGCAAGGTGGGCGAGTATTG...GTCTGGGGAACAGGCATTTAAACCAGGCTGCTGCCCTGGGGAGTGCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTCTCATAATCTCGTCTTaGCACCTTGGCTGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTLIISS*HLGWSQ
Trigger: CTGACTCCAGCCAAGGTGCAAAGACGAGATTATGAG...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACCTGGAGGAAGCCCATaGCGAGGGCTCAGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: ACQVCKPFCLDSLIETALPGGSP*RGLSKV
Trigger: AACTTTGCTGAGCCCTCGCAATGGGCTTCCTCCAGG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp AAGTCCCTGGAATGCAGGGAGCCAAGAAGGGCAGCCGAGGATAAGGCTCTGCCTCTGAGACAGGGTCCCTaGATGAACAGTCCACTGGGA +
Preference number: 5 (lower is better)
Translates to: KSLECREPRRAAEDKALPLRQGP*MNSPLG
Trigger: TCCCAGTGGACTGTTCATCAAGGGACCCTGTCTCAG...AGGCAGAGCCTTATCCTCGGCTGCCCTTCTTGGCTCCCTGCATTCCAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GAGGTTACCAGCAGGAGAGCCTGGAGTGTCGAGGAGTCACCACGGCCCTGCACTGGGTTGTTGAGGGTTTaGATGGGTGATCAATGCTGG +
Preference number: 5 (lower is better)
Translates to: EVTSRRAWSVEESPRPCTGLLRV*MGDQCW
Trigger: CCAGCATTGATCACCCATCAAAACCCTCAACAACCC...AGTGCAGGGCCGTGGTGACTCCTCGACACTCCAGGCTCTCCTGCTGGTAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGCTGTCTGGATATCACTaGACTTTTGGGTGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLLSGYH*TFGCGW
Trigger: CCAACCACACCCAAAAGTCAAGTGATATCCAGACAG...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS CCA 90 bp TTCCCGGGCTCGAGACTCCAGAGAGAACTCTCAGTGTTGATCTTGTaGGTGAGCTTCCCTTCCATGAGGACGCGCTCCCCATTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FPGSRLQRELSVLIL*VSFPSMRTRSPFSS
Trigger: GGAGGAAAATGGGGAGCGCGTCCTCATGGAAGGGAAGCTCACCCACAAGATCAACACTGAGAGTTCTCTCTGGAGTCTCGAGCCCGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000460110.5
ENST00000472246.5
ENST00000493613.5
CDS-3UTR CAA 90 bp GGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGGCTGATGTGGTCAAAGGTTTaGAATACCTGCAGCACCAAG +
Preference number: 5 (lower is better)
Translates to: GCPSFPHCIEPGAREDRLMWSKV*NTCSTK
Trigger: CTTGGTGCTGCAGGTATTCAAAACCTTTGACCACAT...CAGCCTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGAGGGGACTTCAGGCATTaGGTGTGGAGGAATGGGTGG +
Preference number: 5 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGGDFRH*VWRNGW
Trigger: CCACCCATTCCTCCACACCAAATGCCTGAAGTCCCC...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTTTACCTGCCTGTGTCTaGCACAAAGTGCACACTGGG +
Preference number: 5 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRLPACV*HKVHTG
Trigger: CCCAGTGTGCACTTTGTGCAAGACACAGGCAGGTAA...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTACTTGAGCCCAGAGGTTaGAGTCCAGTCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: ACQVCKPFCLDSLIETALLEPRG*SPVWAT
Trigger: TGTTGCCCAGACTGGACTCAAACCTCTGGGCTCAAG...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS TCA 90 bp GTGCTTGGGTACTGGCACCCTGACCTCCAGGTCAGTATAGTCCTGTaGCCAGGTGTAGTTCTCTCGGACAGCACCATTGTAACTGTCGGG +
Preference number: 5 (lower is better)
Translates to: VLGYWHPDLQVSIVL*PGVVLSDSTIVTVG
Trigger: CCCGACAGTTACAATGGTGCTGTCCGAGAGAACTACACCTGGTCACAGGACTATACTGACCTGGAGGTCAGGGTGCCAGTACCCAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000460110.5
ENST00000464812.1
ENST00000472246.5
CDS TCA 90 bp CTGAGACCTGCTTTCCCTTCACCACGTGCTTGGGTACTGGCACCCTaGCCTCCAGGTCAGTATAGTCCTGTGACCAGGTGTAGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LRPAFPSPRAWVLAP*PPGQYSPVTRCSSL
Trigger: GAGAGAACTACACCTGGTCACAGGACTATACTGACCTGGAGGTCAGGGTGCCAGTACCCAAGCACGTGGTGAAGGGAAAGCAGGTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000472246.5
CDS GCA 90 bp CTCAGAGGGAACCAACTTGAGAGCATCGTGACCTGCTCCATGATCTaGACTGAGTTCACCCAACGGAAGGCAGGAGAGTCAAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LRGNQLESIVTCSMI*TEFTQRKAGESRPV
Trigger: CACTGGCCTTGACTCTCCTGCCTTCCGTTGGGTGAACTCAGTGCAGATCATGGAGCAGGTCACGATGCTCTCAAGTTGGTTCCCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338427.10
ENST00000487118.1
CDS GCA 90 bp AAGAGCTCCTCGCTCAGAGGGAACCAACTTGAGAGCATCGTGACCTaGTCCATGATCTGCACTGAGTTCACCCAACGGAAGGCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: KSSSLRGNQLESIVT*SMICTEFTQRKAGE
Trigger: CTCTCCTGCCTTCCGTTGGGTGAACTCAGTGCAGATCATGGAGCAGGTCACGATGCTCTCAAGTTGGTTCCCTCTGAGCGAGGAGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338427.10
ENST00000487118.1
CDS GCA 90 bp GTACATCATGACATGGTGTGGCTCCAGTGGCGCAATCGGTTAGCATaGGGTACTTATAGGACATGGCTCCCTGCTCCATGGAAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: VHHDMVWLQWRNRLA*GTYRTWLPAPWKSP
Trigger: GGGGCTCTTCCATGGAGCAGGGAGCCATGTCCTATAAGTACCGCATGCTAACCGATTGCGCCACTGGAGCCACACCATGTCATGATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS-3UTR CAA 90 bp TTAGGGGTGCCCGAGTTTCCCCCACTGCATAGAGCCTGGTGCCAGGGAAGACAGATGGAGCGCTCCTTGTaGATCTTGTCAATGTCGATG +
Preference number: 5 (lower is better)
Translates to: LGVPEFPPLHRAWCQGRQMERSL*ILSMSM
Trigger: CATCGACATTGACAAGATCAACAAGGAGCGCTCCAT...CTGTCTTCCCTGGCACCAGGCTCTATGCAGTGGGGGAAACTCGGGCACCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTTCTCGTCTTTGCACCTaGGCTGGAGTCAGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPSRLCT*AGVSQQ
Trigger: CTGCTGACTGACTCCAGCCAAGGTGCAAAGACGAGA...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTATCCATGCTCTGAGCTaGACAGACAGGCAAATGGAC +
Preference number: 5 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRIHALS*TDRQMD
Trigger: GTCCATTTGCCTGTCTGTCAAGCTCAGAGCATGGAT...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGATGTTTGCTGTGTACGTaGGCCTGGGACCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGCLLCT*AWDLKA
Trigger: AGCCTTGAGGTCCCAGGCCAACGTACACAGCAAACA...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGACAGCAAACGCCAGCTaGCCAGGGGTTTACCCAGAA +
Preference number: 5 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMTANAS*PGVYPE
Trigger: TTCTGGGTAAACCCCTGGCAAGCTGGCGTTTGCTGT...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTCTAAGGGTCACTGCCTaGGGATTTGCCTGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPLRVTA*GFACRL
Trigger: TAGCCTGCAGGCAAATCCCAAGGCAGTGACCCTTAG...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS CCA 90 bp CACTTCATCGCTGTGACCTGGGTTCTTTGCTTTGCCTCTCAGGACTaGATGGGGCTTCAATGGGTCTCACCCATGACCTGCTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: HFIAVTWVLCFASQD*MGLQWVSPMTCFPF
Trigger: GAAGGGAAAGCAGGTCATGGGTGAGACCCATTGAAGCCCCATCCAGTCCTGAGAGGCAAAGCAAAGAACCCAGGTCACAGCGATGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478769.1
CDS-3UTR CAA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGAGGCCTGGTTCACCCTaGAAAGAAAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMRPGSP*KERMAR
Trigger: CCTAGCCATCCTTTCTTTCAAGGGTGAACCAGGCCT...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CAGAGCAGCTTCCTAAACTCCCTAGTCCAGCAGAGGTTAGGGCTCGCTTTCCCTCTCTCAGTGTTGATCTaGTGGGTGAGCTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: QSSFLNSLVQQRLGLAFPLSVLI*WVSFPS
Trigger: GGAAGGGAAGCTCACCCACAAGATCAACACTGAGAG...AGGGAAAGCGAGCCCTAACCTCTGCTGGACTAGGGAGTTTAGGAAGCTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp AGCCCTTCAAGGTCAAAGCTTCTCAGGACTTGTGGCTGTCGAGCTCTGCTGAGCACAGCCATTCCTTGCTaGCCCTCATGCAAGCACAGA +
Preference number: 5 (lower is better)
Translates to: SPSRSKLLRTCGCRALLSTAIPC*PSCKHR
Trigger: TCTGTGCTTGCATGAGGGCAAGCAAGGAATGGCTGT...GCTCAGCAGAGCTCGACAGCCACAAGTCCTGAGAAGCTTTGACCTTGAAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CACCAGCTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTGGAGAACAGGTAAGATaGGGCCATAAGTTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: HQLSTPAHTLTPCTQRGRGEQVR*GHKFQG
Trigger: TCCTTGGAACTTATGGCCCAATCTTACCTGTTCTCC...ACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GCCTGCCAGGTGTGTAAGCCTTTCTGCCTGGACAGCCTCATTGAGACAGCCCTAGGTCACAAGATGGCCTaGATCCCCAGTTATCTGGAT +
Preference number: 5 (lower is better)
Translates to: ACQVCKPFCLDSLIETALGHKMA*IPSYLD
Trigger: ATCCAGATAACTGGGGATCAAGGCCATCTTGTGACC...TAGGGCTGTCTCAATGAGGCTGTCCAGGCAGAAAGGCTTACACACCTGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS TCA 90 bp AAGAAACCTGCTTTCCCTTCACCACGTGCTTGGGTACTGGCACCCTaGCCTCCAGGTCAGTATAGTCCTGTGACCAGGTGTAGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: KKPAFPSPRAWVLAP*PPGQYSPVTRCSSL
Trigger: GAGAGAACTACACCTGGTCACAGGACTATACTGACCTGGAGGTCAGGGTGCCAGTACCCAAGCACGTGGTGAAGGGAAAGCAGGTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460110.5
CDS CCA 90 bp CAAGGCCAGTGTTTTAAGGCAGGGCTATCACGACCTCTCAGTCCATaGAGATGGCAACCCCAGGATCACGGGCTCACTAGTGTAATACAG +
Preference number: 5 (lower is better)
Translates to: QGQCFKAGLSRPLSP*RWQPQDHGLTSVIQ
Trigger: CTGTATTACACTAGTGAGCCCGTGATCCTGGGGTTGCCATCTCCATGGACTGAGAGGTCGTGATAGCCCTGCCTTAAAACACTGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338427.10
CDS-3UTR CAA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTAGGAAATCCTGGACGTaGCCCACGTGCTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTRKSWT*PTCCRM
Trigger: CATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCT...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACAGGCCACATGGGCTGCTaGACCTCTGACCACCAAGGA +
Preference number: 5 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTGHMGC*TSDHQG
Trigger: TCCTTGGTGGTCAGAGGTCAAGCAGCCCATGTGGCC...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TGGCACGATGCTGTCTCCCTGTGCAAAGTGGGGACTTCAGGCATTTGGTGTGGATATCTGCCACTCACCTaGGTCATGATGCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: WHDAVSLCKVGTSGIWCGYLPLT*VMMPQR
Trigger: TCTCTGTGGCATCATGACCAAGGTGAGTGGCAGATA...TCCACACCAAATGCCTGAAGTCCCCACTTTGCACAGGGAGACAGCATCGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CTCTCCACTCCTGCCCACACTTTGACACCGTGCACCCAAAGAGGACGTCTTATGAGAGAACTCTCAGTGTaGATCTTGTGGGTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSTPAHTLTPCTQRGRLMRELSV*ILWVSF
Trigger: GAAGCTCACCCACAAGATCAACACTGAGAGTTCTCT...CATAAGACGTCCTCTTTGGGTGCACGGTGTCAAAGTGTGGGCAGGAGTGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GTCGAGATCTCTTTAGAGGGGCTTCACCAGCTCAGTGGCAAATATCAGACAACAAGCCCCTGTGAGTACTaGGAACACAGGCCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: VEISLEGLHQLSGKYQTTSPCEY*EHRPED
Trigger: GTCCTCAGGCCTGTGTTCCAAGTACTCACAGGGGCT...TGTTGTCTGATATTTGCCACTGAGCTGGTGAAGCCCCTCTAAAGAGATCTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCGCCTATTCTACCTCCTaGCCTGGCTGTCCCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LLWRQKHVIPICWDILSCAYSTS*PGCPLL
Trigger: AAGGAGGGGACAGCCAGGCAAGGAGGTAGAATAGGC...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS TCA 90 bp GCCATTTCCTTCACAGGGCCTGGAGGCTGCACTTTCTCTACTTCCTaGTGCCCATCCAATTCTGTGGTGGAGTCAATCTCTATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: AISFTGPGGCTFSTS*CPSNSVVESISISW
Trigger: CCAGGAAATAGAGATTGACTCCACCACAGAATTGGATGGGCATCAGGAAGTAGAGAAAGTGCAGCCTCCAGGCCCTGTGAAGGAAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000480209.1
CDS GCA 90 bp CCACATAGCAGGCCAATGTGGAACTCTCCAGAAACTGAGTGCAGCTaGTGTCCATCGGAGAAATTTCTTCTACTTCAGGGGAGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: PHSRPMWNSPETECS*CPSEKFLLLQGSSA
Trigger: AGCAGAGCTCCCCTGAAGTAGAAGAAATTTCTCCGATGGACAGCAGCTGCACTCAGTTTCTGGAGAGTTCCACATTGGCCTGCTATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460110.5
CDS GCA 90 bp CGCCAGCTCAAGTCTTTGGTAGTTCTGGGGCATGCACGTTTCTGTTaGTGTAAATGTCCTTCCTTCTGTCTGGCCTGCATGGATTTCGCT +
Preference number: 5 (lower is better)
Translates to: RQLKSLVVLGHARFC*CKCPSFCLACMDFA
Trigger: AGCGAAATCCATGCAGGCCAGACAGAAGGAAGGACATTTACAGCAACAGAAACGTGCATGCCCCAGAACTACCAAAGACTTGAGCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS CCA 90 bp GAGGCTGCACTTTCTCTACTTCCTGATGCCCATCCAATTCTGTGGTaGAGTCAATCTCTATTTCCTGGACTGGAACTGGGACTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: EAALSLLPDAHPILW*SQSLFPGLELGLAP
Trigger: AGGAGCCAGTCCCAGTTCCAGTCCAGGAAATAGAGATTGACTCCACCACAGAATTGGATGGGCATCAGGAAGTAGAGAAAGTGCAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000480209.1
ENST00000497978.1
CDS CCA 90 bp CTGGAGGCTGCACTTTCTCTACTTCCTGATGCCCATCCAATTCTGTaGTGGAGTCAATCTCTATTTCCTGGACTGGAACTGGGACTGGCT +
Preference number: 5 (lower is better)
Translates to: LEAALSLLPDAHPIL*WSQSLFPGLELGLA
Trigger: AGCCAGTCCCAGTTCCAGTCCAGGAAATAGAGATTGACTCCACCACAGAATTGGATGGGCATCAGGAAGTAGAGAAAGTGCAGCCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000480209.1
CDS CCA 90 bp GTCGGGATTTTTCTGGAACTGCTCCTGAATCATGATTGTGGGGGCTaGCTAGGCCAGTCTGAAATCCACATAGCAGGCCAATGTGGAACT +
Preference number: 5 (lower is better)
Translates to: VGIFLELLLNHDCGG*LGQSEIHIAGQCGT
Trigger: AGTTCCACATTGGCCTGCTATGTGGATTTCAGACTGGCCTAGCCAGCCCCCACAATCATGATTCAGGAGCAGTTCCAGAAAAATCCCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460110.5
CDS-3UTR CAA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCACCCTTCACCACGTGCTaGGGTACTGGCACCCTGACC +
Preference number: 5 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPPFTTC*GTGTLT
Trigger: GGTCAGGGTGCCAGTACCCAAGCACGTGGTGAAGGG...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCCGCTCCTTGTTGATCTaGTCAATGTCGATGGGCTCT +
Preference number: 5 (lower is better)
Translates to: LLWRQKHVIPICWDILSCRSLLI*SMSMGS
Trigger: AGAGCCCATCGACATTGACAAGATCAACAAGGAGCG...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp ACACATTTCCACACAAAACACTTCTCAACTGTTCTCCCTCCTGCACTCTTCAGGTCTCTTCTGGTTCAGTaGTGGTGGGACAGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: THFHTKHFSTVLPPALFRSLLVQ*WWDSVP
Trigger: AGGCACACTGTCCCACCACAACTGAACCAGAAGAGA...CCTGAAGAGTGCAGGAGGGAGAACAGTTGAGAAGTGTTTTGTGTGGAAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp GCCTTTTGCTCTCCTGTGATGATCGGAGCAACATGTTTGGACCCACAGAAGACTAGCTGTATTGAGATCTaGCCCAGTGCATTCAGACCA +
Preference number: 5 (lower is better)
Translates to: AFCSPVMIGATCLDPQKTSCIEI*PSAFRP
Trigger: TGGTCTGAATGCACTGGGCAAGATCTCAATACAGCT...AGTCTTCTGTGGGTCCAAACATGTTGCTCCGATCATCACAGGAGAGCAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS TCA 90 bp CTGCAGCAGCTGACACAGTCTTGGCCTCTTCCTCTTCCTTTCTTCTaGTTTTCTCTTCAAGTTCCTGCCTTCTCTTCTCATCATCCTGAC +
Preference number: 5 (lower is better)
Translates to: LQQLTQSWPLPLPFF*FSLQVPAFSSHHPD
Trigger: GTCAGGATGATGAGAAGAGAAGGCAGGAACTTGAAGAGAAAATCAGAAGAAAGGAAGAGGAAGAGGCCAAGACTGTGTCAGCTGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000480209.1
ENST00000497978.1
CDS-3UTR CAA 90 bp TGCAACAATAATGACCATGCACAGACAGAACTGTCTCAGCAGCAAATGTCACACATCGGAGCAACATGTTaGGACCCACAGAAGACTTCC +
Preference number: 5 (lower is better)
Translates to: CNNNDHAQTELSQQQMSHIGATC*DPQKTS
Trigger: GGAAGTCTTCTGTGGGTCCAAACATGTTGCTCCGAT...GTGTGACATTTGCTGCTGAGACAGTTCTGTCTGTGCATGGTCATTATTGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp TTGCTGTGGAGACAAAAGCATGTGATCCCAATTTGCTGGGATATCCTCTCCTGCGCCAAACTGCGGCTGTaGTGTCTAAAAAGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LLWRQKHVIPICWDILSCAKLRL*CLKREN
Trigger: GTTTTCTCTTTTTAGACACAACAGCCGCAGTTTGGC...GCAGGAGAGGATATCCCAGCAAATTGGGATCACATGCTTTTGTCTCCACAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS GCA 90 bp TGGTCTTTGTTGTCATTATTTTACAGACCCCAGTCTTGTTCACAATaGAAAGAATACACGGTCCTGGTACAACTGCAGCACCAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: WSLLSLFYRPQSCSQ*KEYTVLVQLQHQGL
Trigger: CAGGCCTTGGTGCTGCAGTTGTACCAGGACCGTGTATTCTTTGCATTGTGAACAAGACTGGGGTCTGTAAAATAATGACAACAAAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464812.1
CDS-3UTR CAA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCAGCATGTGATCCCAATTaGCTGGGATATCCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPACDPN*LGYPLL
Trigger: CAGGAGAGGATATCCCAGCAAATTGGGATCACATGC...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS TCA 90 bp TGCTTGTTCAAGGTAATACATTCAGGAAGCGGCATAGCGAGGATGTaGATCCAGTCACCTAAAACAGACTGTCATTTCAGGTGTCCATTA +
Preference number: 5 (lower is better)
Translates to: CLFKVIHSGSGIARM*IQSPKTDCHFRCPL
Trigger: TAATGGACACCTGAAATGACAGTCTGTTTTAGGTGACTGGATTCACATCCTCGCTATGCCGCTTCCTGAATGTATTACCTTGAACAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480209.1
CDS TCA 90 bp ACCACTACATTCAAAAGTGCCCAGTCAACTTCACTGAATGAGTATTaGCAGCGTTTCCAACATACAATAAACTTAACCTGGAGGGTACGG +
Preference number: 5 (lower is better)
Translates to: TTTFKSAQSTSLNEY*QRFQHTINLTWRVR
Trigger: CCGTACCCTCCAGGTTAAGTTTATTGTATGTTGGAAACGCTGTCAATACTCATTCAGTGAAGTTGACTGGGCACTTTTGAATGTAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS-3UTR CAA 90 bp GACAGAATATTCATTTTTCGTCTCTCTGAGATAGTGACCACACTGTCCTCACCACACAAAATCCCTTCTTaGCATTACCAAAAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: DRIFIFRLSEIVTTLSSPHKIPS*HYQKRW
Trigger: CCACCTCTTTTGGTAATGCAAAGAAGGGATTTTGTG...TGGTGAGGACAGTGTGGTCACTATCTCAGAGAGACGAAAAATGAATATTCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS-3UTR CAA 90 bp CAAATGTCACACGCAGACCCAGAACTGCTTAAATACCAATTTATTGCAAACCAAGTTAATGCTCTACTGTaGCTGTCTGGATATCACTTG +
Preference number: 5 (lower is better)
Translates to: QMSHADPELLKYQFIANQVNALL*LSGYHL
Trigger: CAAGTGATATCCAGACAGCAACAGTAGAGCATTAAC...TTGGTTTGCAATAAATTGGTATTTAAGCAGTTCTGGGTCTGCGTGTGACATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355451.8
CDS TCA 90 bp TTTGAATACCACTACATTCAAAAGTGCCCAGTCAACTTCACTGAATaGGTATTGACAGCGTTTCCAACATACAATAAACTTAACCTGGAG +
Preference number: 5 (lower is better)
Translates to: FEYHYIQKCPVNFTE*VLTAFPTYNKLNLE
Trigger: CTCCAGGTTAAGTTTATTGTATGTTGGAAACGCTGTCAATACTCATTCAGTGAAGTTGACTGGGCACTTTTGAATGTAGTGGTATTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS TCA 72 bp CCTTCCTTCTGTCTGGCCTGCATGGATTTCGCTCCCTaGCTAGCGGCCCCCAGCACCGTGAGGGGTACGCGC +
Preference number: 6 (lower is better)
Translates to: PSFCLACMDFAP*LAAPSTVRGTR
Trigger: GCGCGTACCCCTCACGGTGCTGGGGGCCGCTAGTCAGGGAGCGAAATCCATGCAGGCCAGACAGAAGGAAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS GCA 72 bp GCAGGAAATCCTGGACGTTGCCCACGTGCTGCAGGATaGCCAAAAGGGCCTGGTCATACAGCTCGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: AGNPGRCPRAAG*PKGPGHTARPP
Trigger: GGGCGGCCGAGCTGTATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS CCA 72 bp ACGTTGCCCACGTGCTGCAGGATGCCCAAAAGGGCCTaGTCATACAGCTCGGCCGCCCCTGTCTCCATGTCG +
Preference number: 6 (lower is better)
Translates to: TLPTCCRMPKRA*SYSSAAPVSMS
Trigger: CGACATGGAGACAGGGGCGGCCGAGCTGTATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS CCA 72 bp CCCGGGGAGATGTTGAACATGGCAGGGTCGAATCGCTaGCCTCGGAAGGGAGAACCTTCAGCATCCCACCCC +
Preference number: 6 (lower is better)
Translates to: PGEMLNMAGSNR*PRKGEPSASHP
Trigger: GGGGTGGGATGCTGAAGGTTCTCCCTTCCGAGGCCAGCGATTCGACCCTGCCATGTTCAACATCTCCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338427.10
ENST00000355451.8
ENST00000460110.5
ENST00000475952.1
ENST00000493613.5
CDS GCA 72 bp GGACCTCAGCTGGTGGGACTTAGTGGCTGGCCAAACTaGGGCTGTTGTGTCAAGAGCTCCTCGCTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: GPQLVGLSGWPN*GCCVKSSSLRG
Trigger: CCCTCTGAGCGAGGAGCTCTTGACACAACAGCCGCAGTTTGGCCAGCCACTAAGTCCCACCAGCTGAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487118.1
CDS CAA 72 bp CCCTCCAGGATGGCGTTCCACCAATACTCGCCCACCTaGCTCAGGTTCACCAAAACGCACTTCCCGGGCTCG +
Preference number: 6 (lower is better)
Translates to: PSRMAFHQYSPT*LRFTKTHFPGS
Trigger: CGAGCCCGGGAAGTGCGTTTTGGTGAACCTGAGCAAGGTGGGCGAGTATTGGTGGAACGCCATCCTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000460110.5
ENST00000472246.5
ENST00000493613.5
CDS GCA 72 bp AGAACGCGCAGGAAATCCTGGACGTTGCCCACGTGCTaGAGGATGCCCAAAAGGGCCTGGTCATACAGCTCG +
Preference number: 6 (lower is better)
Translates to: RTRRKSWTLPTC*RMPKRAWSYSS
Trigger: CGAGCTGTATGACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCTGCGCGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS GCA 72 bp GGAAGCCAAAGAGAACGCGCAGGAAATCCTGGACGTTaGCCACGTGCTGCAGGATGCCCAAAAGGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: GSQRERAGNPGR*PRAAGCPKGPG
Trigger: ACCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCTGCGCGTTCTCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS GCA 72 bp CCTCCAGGATGGCGTTCCACCAATACTCGCCCACCTTaGTCAGGTTCACCTGGGGACAAGCAGGACAGAGAC +
Preference number: 6 (lower is better)
Translates to: PPGWRSTNTRPP*SGSPGDKQDRD
Trigger: GTCTCTGTCCTGCTTGTCCCCAGGTGAACCTGAGCAAGGTGGGCGAGTATTGGTGGAACGCCATCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475952.1
CDS CCA 72 bp GCTTTCCTCGGACCTCAGCTGGTGGGACTTAGTGGCTaGCCAAACTGCGGCTGTTGTGTCAAGAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: AFLGPQLVGLSG*PNCGCCVKSSS
Trigger: CGAGGAGCTCTTGACACAACAGCCGCAGTTTGGCCAGCCACTAAGTCCCACCAGCTGAGGTCCGAGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487118.1
CDS CAA 72 bp AGGAAGCCAAAGAGAACGCGCAGGAAATCCTGGACGTaGCCCACGTGCTGCAGGATGCCCAAAAGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RKPKRTRRKSWT*PTCCRMPKRAW
Trigger: CCAGGCCCTTTTGGGCATCCTGCAGCACGTGGGCAACGTCCAGGATTTCCTGCGCGTTCTCTTTGGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS CAA 72 bp CCCTCCAGGATGGCGTTCCACCAATACTCGCCCACCTaGCTCAGGTTCACCTGGGGACAAGCAGGACAGAGA +
Preference number: 6 (lower is better)
Translates to: PSRMAFHQYSPT*LRFTWGQAGQR
Trigger: TCTCTGTCCTGCTTGTCCCCAGGTGAACCTGAGCAAGGTGGGCGAGTATTGGTGGAACGCCATCCTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475952.1
CDS CAA 90 bp ACCGCCTGTTCCTCCTCATCCACGGTGGCCATGGAGCGCTCCTTGTaGATCTTGTCAATGTCGATGGGCTCTTCTCCCTCCAGGATGGCG +
Preference number: 6 (lower is better)
Translates to: TACSSSSTVAMERSL*ILSMSMGSSPSRMA
Trigger: CGCCATCCTGGAGGGAGAAGAGCCCATCGACATTGACAAGATCAACAAGGAGCGCTCCATGGCCACCGTGGATGAGGAGGAACAGGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338427.10
ENST00000355451.8
ENST00000460110.5
ENST00000475952.1
ENST00000493613.5
CDS CAA 90 bp GCACACAGGCCTGGCCGTCCACTTCATCGCTGTGACCTGGGTTCTTaGCTTTGCCTCTCAGGACTGGATGGGGCTTCAATGGGTCTCACC +
Preference number: 6 (lower is better)
Translates to: AHRPGRPLHRCDLGS*LCLSGLDGASMGLT
Trigger: GGTGAGACCCATTGAAGCCCCATCCAGTCCTGAGAGGCAAAGCAAAGAACCCAGGTCACAGCGATGAAGTGGACGGCCAGGCCTGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS CAA 90 bp AACACCGCCTGTTCCTCCTCATCCACGGTGGCCATGGAGCGCTCCTaGTTGATCTTGTCAATGTCGATGGGCTCTTCTCCCTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: NTACSSSSTVAMERS*LILSMSMGSSPSRM
Trigger: CATCCTGGAGGGAGAAGAGCCCATCGACATTGACAAGATCAACAAGGAGCGCTCCATGGCCACCGTGGATGAGGAGGAACAGGCGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338427.10
ENST00000355451.8
ENST00000460110.5
ENST00000475952.1
ENST00000493613.5
CDS CAA 90 bp CACTTCCCGGGCTCGAGACTCCAGAGAGAACTCTCAGTGTTGATCTaGTGGGTGAGCTTCCCTTCCATGAGGACGCGCTCCCCATTTTCC +
Preference number: 6 (lower is better)
Translates to: HFPGSRLQRELSVLI*WVSFPSMRTRSPFS
Trigger: GGAAAATGGGGAGCGCGTCCTCATGGAAGGGAAGCTCACCCACAAGATCAACACTGAGAGTTCTCTCTGGAGTCTCGAGCCCGGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000460110.5
ENST00000472246.5
ENST00000493613.5
CDS CAA 90 bp AAAACGCACTTCCCGGGCTCGAGACTCCAGAGAGAACTCTCAGTGTaGATCTTGTGGGTGAGCTTCCCTTCCATGAGGACGCGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: KTHFPGSRLQRELSV*ILWVSFPSMRTRSP
Trigger: TGGGGAGCGCGTCCTCATGGAAGGGAAGCTCACCCACAAGATCAACACTGAGAGTTCTCTCTGGAGTCTCGAGCCCGGGAAGTGCGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000460110.5
ENST00000472246.5
ENST00000493613.5
CDS CAA 90 bp GGGGTTACTGCACCGGTCACAAGGGCTCCTGGAATGCTCTCAGGTTaGTCTCCTCCATCCACCCTCACTGCCTTGGTGATCTTACCCAGT +
Preference number: 6 (lower is better)
Translates to: GVTAPVTRAPGMLSG*SPPSTLTALVILPS
Trigger: ACTGGGTAAGATCACCAAGGCAGTGAGGGTGGATGGAGGAGACAAACCTGAGAGCATTCCAGGAGCCCTTGTGACCGGTGCAGTAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472246.5
CDS GCA 72 bp CTGGCCGTCCACTTCATCGCTGTGACCTGGGTTCTTTaGTTTGCCTCTCAGGACTGGATGGGGCTTCAATGG +
Preference number: 6 (lower is better)
Translates to: LAVHFIAVTWVL*FASQDWMGLQW
Trigger: CCATTGAAGCCCCATCCAGTCCTGAGAGGCAAAGCAAAGAACCCAGGTCACAGCGATGAAGTGGACGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS GCA 72 bp GACATGGTGTGGCTCCAGTGGCGCAATCGGTTAGCATaGGGTACTTATAGGACATGGCTCCCTGCTCCATGG +
Preference number: 6 (lower is better)
Translates to: DMVWLQWRNRLA*GTYRTWLPAPW
Trigger: CCATGGAGCAGGGAGCCATGTCCTATAAGTACCGCATGCTAACCGATTGCGCCACTGGAGCCACACCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS CCA 72 bp TGGCGCAATCGGTTAGCATGCGGTACTTATAGGACATaGCTCCCTGCTCCATGGAAGAGCCCCACAGCACAC +
Preference number: 6 (lower is better)
Translates to: WRNRLACGTYRT*LPAPWKSPTAH
Trigger: GTGTGCTGTGGGGCTCTTCCATGGAGCAGGGAGCCATGTCCTATAAGTACCGCATGCTAACCGATTGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS CCA 72 bp GCTGTGACCTGGGTTCTTTGCTTTGCCTCTCAGGACTaGATGGGGCTTCAATGGGTCTCACCCATGACCTGC +
Preference number: 6 (lower is better)
Translates to: AVTWVLCFASQD*MGLQWVSPMTC
Trigger: GCAGGTCATGGGTGAGACCCATTGAAGCCCCATCCAGTCCTGAGAGGCAAAGCAAAGAACCCAGGTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478769.1
CDS CAA 72 bp TCCTCCTCATCCACGGTGGCCATGGAGCGCTCCTTGTaGATCTTGTCAATGTCGATGGGCTCTTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSSTVAMERSL*ILSMSMGSSPS
Trigger: GGAGGGAGAAGAGCCCATCGACATTGACAAGATCAACAAGGAGCGCTCCATGGCCACCGTGGATGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338427.10
ENST00000355451.8
ENST00000460110.5
ENST00000475952.1
ENST00000493613.5
CDS GCA 72 bp CCGATGGGTGGCGCAGCAAGCGATAGAAGTCTGTCTTaGGGTAGAGGAAGCCAAAGAGAACGCGCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: PMGGAASDRSLS*GRGSQRERAGN
Trigger: ATTTCCTGCGCGTTCTCTTTGGCTTCCTCTACCGCAAGACAGACTTCTATCGCTTGCTGCGCCACCCATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355451.8
ENST00000464812.1
CDS GCA 72 bp CGTCCACTTCATCGCTGTGACCTGGGTTCTTTGCTTTaGCTCTCAGGACTGGATGGGGCTTCAATGGGTCTC +
Preference number: 6 (lower is better)
Translates to: RPLHRCDLGSLL*LSGLDGASMGL
Trigger: GAGACCCATTGAAGCCCCATCCAGTCCTGAGAGGCAAAGCAAAGAACCCAGGTCACAGCGATGAAGTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS CCA 72 bp TCTTGTCAATGTCGATGGGCTCTTCTCCCTCCAGGATaGCGTTCCACCAATACTCGCCCACCTTGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: SCQCRWALLPPG*RSTNTRPPCSG
Trigger: ACCTGAGCAAGGTGGGCGAGTATTGGTGGAACGCCATCCTGGAGGGAGAAGAGCCCATCGACATTGACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338427.10
ENST00000355451.8
ENST00000460110.5
ENST00000472246.5
ENST00000475952.1
ENST00000493613.5
CDS CCA 72 bp TCGAGACTCCAGAGAGAACTCTCAGTGTTGATCTTGTaGGTGAGCTTCCCTTCCATGAGGACGCGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: SRLQRELSVLIL*VSFPSMRTRSP
Trigger: TGGGGAGCGCGTCCTCATGGAAGGGAAGCTCACCCACAAGATCAACACTGAGAGTTCTCTCTGGAGTCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000460110.5
ENST00000472246.5
ENST00000493613.5
CDS CAA 72 bp TGTTCCTCCTCATCCACGGTGGCCATGGAGCGCTCCTaGTTGATCTTGTCAATGTCGATGGGCTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: CSSSSTVAMERS*LILSMSMGSSP
Trigger: GGGAGAAGAGCCCATCGACATTGACAAGATCAACAAGGAGCGCTCCATGGCCACCGTGGATGAGGAGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338427.10
ENST00000355451.8
ENST00000460110.5
ENST00000475952.1
ENST00000493613.5
CDS CAA 72 bp TTCCCGGGCTCGAGACTCCAGAGAGAACTCTCAGTGTaGATCTTGTGGGTGAGCTTCCCTTCCATGAGGACG +
Preference number: 6 (lower is better)
Translates to: FPGSRLQRELSV*ILWVSFPSMRT
Trigger: CGTCCTCATGGAAGGGAAGCTCACCCACAAGATCAACACTGAGAGTTCTCTCTGGAGTCTCGAGCCCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000460110.5
ENST00000472246.5
ENST00000493613.5
CDS GCA 72 bp TCGCTCAGAGGGAACCAACTTGAGAGCATCGTGACCTaGTCCATGATCTGCACTGAGTTCACCCAACGGAAG +
Preference number: 6 (lower is better)
Translates to: SLRGNQLESIVT*SMICTEFTQRK
Trigger: CTTCCGTTGGGTGAACTCAGTGCAGATCATGGAGCAGGTCACGATGCTCTCAAGTTGGTTCCCTCTGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338427.10
ENST00000487118.1
CDS CAA 72 bp ACACAATGCCTCCGTCATCCCCGCCAGCTCAAGTCTTaGGTAGTTCTGGGGCATGCACGTTTCTGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: TQCLRHPRQLKS*VVLGHARFCCC
Trigger: ACAGCAACAGAAACGTGCATGCCCCAGAACTACCAAAGACTTGAGCTGGCGGGGATGACGGAGGCATTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS TCA 72 bp TACTGGCACCCTGACCTCCAGGTCAGTATAGTCCTGTaGCCAGGTGTAGTTCTCTCGGACAGCACCATTGTA +
Preference number: 6 (lower is better)
Translates to: YWHPDLQVSIVL*PGVVLSDSTIV
Trigger: TACAATGGTGCTGTCCGAGAGAACTACACCTGGTCACAGGACTATACTGACCTGGAGGTCAGGGTGCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000460110.5
ENST00000464812.1
ENST00000472246.5
CDS TCA 72 bp TGGGAAGTCACATTTCAAACAAGCGACCACACCCATTaGTCAACACAATGCCTCCGTCATCCCCGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: WEVTFQTSDHTH*STQCLRHPRQL
Trigger: GAGCTGGCGGGGATGACGGAGGCATTGTGTTGATCAATGGGTGTGGTCGCTTGTTTGAAATGTGACTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS GCA 72 bp AACCAACTTGAGAGCATCGTGACCTGCTCCATGATCTaGACTGAGTTCACCCAACGGAAGGCAGGAGAGTCA +
Preference number: 6 (lower is better)
Translates to: NQLESIVTCSMI*TEFTQRKAGES
Trigger: TGACTCTCCTGCCTTCCGTTGGGTGAACTCAGTGCAGATCATGGAGCAGGTCACGATGCTCTCAAGTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338427.10
ENST00000487118.1
CDS CAA 72 bp CTGGGAAGTCACATTTCAAACAAGCGACCACACCCATaGATCAACACAATGCCTCCGTCATCCCCGCCAGCT +
Preference number: 6 (lower is better)
Translates to: LGSHISNKRPHP*INTMPPSSPPA
Trigger: AGCTGGCGGGGATGACGGAGGCATTGTGTTGATCAATGGGTGTGGTCGCTTGTTTGAAATGTGACTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS TCA 72 bp TTCACAGGGCCTGGAGGCTGCACTTTCTCTACTTCCTaGTGCCCATCCAATTCTGTGGTGGAGTCAATCTCT +
Preference number: 6 (lower is better)
Translates to: FTGPGGCTFSTS*CPSNSVVESIS
Trigger: AGAGATTGACTCCACCACAGAATTGGATGGGCATCAGGAAGTAGAGAAAGTGCAGCCTCCAGGCCCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000480209.1
CDS CCA 72 bp CCATCCAATTCTGTGGTGGAGTCAATCTCTATTTCCTaGACTGGAACTGGGACTGGCTCCTTCTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PSNSVVESISIS*TGTGTGSFSAA
Trigger: TGCAGCTGAGAAGGAGCCAGTCCCAGTTCCAGTCCAGGAAATAGAGATTGACTCCACCACAGAATTGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000480209.1
ENST00000497978.1
CDS CCA 72 bp TTTCTGGAACTGCTCCTGAATCATGATTGTGGGGGCTaGCTAGGCCAGTCTGAAATCCACATAGCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: FLELLLNHDCGG*LGQSEIHIAGQ
Trigger: TTGGCCTGCTATGTGGATTTCAGACTGGCCTAGCCAGCCCCCACAATCATGATTCAGGAGCAGTTCCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460110.5
CDS GCA 72 bp AGGCCAATGTGGAACTCTCCAGAAACTGAGTGCAGCTaGTGTCCATCGGAGAAATTTCTTCTACTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: RPMWNSPETECS*CPSEKFLLLQG
Trigger: CCCCTGAAGTAGAAGAAATTTCTCCGATGGACAGCAGCTGCACTCAGTTTCTGGAGAGTTCCACATTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460110.5
CDS GCA 72 bp AATGCTCTCAGGTTTGTCTCCTCCATCCACCCTCACTaGCTTGGTGATCTTACCCAGTCTATGGTTAAATGC +
Preference number: 6 (lower is better)
Translates to: NALRFVSSIHPH*LGDLTQSMVKC
Trigger: GCATTTAACCATAGACTGGGTAAGATCACCAAGGCAGTGAGGGTGGATGGAGGAGACAAACCTGAGAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472246.5
CDS CAA 72 bp CTCTCAGGTTTGTCTCCTCCATCCACCCTCACTGCCTaGGTGATCTTACCCAGTCTATGGTTAAATGCATCT +
Preference number: 6 (lower is better)
Translates to: LSGLSPPSTLTA*VILPSLWLNAS
Trigger: AGATGCATTTAACCATAGACTGGGTAAGATCACCAAGGCAGTGAGGGTGGATGGAGGAGACAAACCTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472246.5
CDS TCA 72 bp TTTGAAACTCAAGTTGCGAATGTTACAGGTACATCATaGCATGGTGTGGCTCCAGTGGCGCAATCGGTTAGC +
Preference number: 6 (lower is better)
Translates to: FETQVANVTGTS*HGVAPVAQSVS
Trigger: GCTAACCGATTGCGCCACTGGAGCCACACCATGTCATGATGTACCTGTAACATTCGCAACTTGAGTTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460110.5
ENST00000478769.1
CDS GCA 72 bp CATAGCAGGCCAATGTGGAACTCTCCAGAAACTGAGTaGAGCTGCTGTCCATCGGAGAAATTTCTTCTACTT +
Preference number: 6 (lower is better)
Translates to: HSRPMWNSPETE*SCCPSEKFLLL
Trigger: AAGTAGAAGAAATTTCTCCGATGGACAGCAGCTGCACTCAGTTTCTGGAGAGTTCCACATTGGCCTGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460110.5
CDS CCA 72 bp CTTTCTCTACTTCCTGATGCCCATCCAATTCTGTGGTaGAGTCAATCTCTATTTCCTGGACTGGAACTGGGA +
Preference number: 6 (lower is better)
Translates to: LSLLPDAHPILW*SQSLFPGLELG
Trigger: TCCCAGTTCCAGTCCAGGAAATAGAGATTGACTCCACCACAGAATTGGATGGGCATCAGGAAGTAGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000480209.1
ENST00000497978.1
CDS CCA 72 bp GCACTTTCTCTACTTCCTGATGCCCATCCAATTCTGTaGTGGAGTCAATCTCTATTTCCTGGACTGGAACTG +
Preference number: 6 (lower is better)
Translates to: ALSLLPDAHPIL*WSQSLFPGLEL
Trigger: CAGTTCCAGTCCAGGAAATAGAGATTGACTCCACCACAGAATTGGATGGGCATCAGGAAGTAGAGAAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355451.8
ENST00000464812.1
ENST00000480209.1
ENST00000497978.1
CDS TCA 72 bp AAGGTAATACATTCAGGAAGCGGCATAGCGAGGATGTaGATCCAGTCACCTAAAACAGACTGTCATTTCAGG +
Preference number: 6 (lower is better)
Translates to: KVIHSGSGIARM*IQSPKTDCHFR
Trigger: CCTGAAATGACAGTCTGTTTTAGGTGACTGGATTCACATCCTCGCTATGCCGCTTCCTGAATGTATTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480209.1
CDS CAA 72 bp ATGGTCTTTGTTGTCATTATTTTACAGACCCCAGTCTaGTTCACAATGCAAAGAATACACGGTCCTGGTACA +
Preference number: 6 (lower is better)
Translates to: MVFVVIILQTPV*FTMQRIHGPGT
Trigger: TGTACCAGGACCGTGTATTCTTTGCATTGTGAACAAGACTGGGGTCTGTAAAATAATGACAACAAAGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464812.1
CDS TCA 72 bp TTCAAAAGTGCCCAGTCAACTTCACTGAATGAGTATTaGCAGCGTTTCCAACATACAATAAACTTAACCTGG +
Preference number: 6 (lower is better)
Translates to: FKSAQSTSLNEY*QRFQHTINLTW
Trigger: CCAGGTTAAGTTTATTGTATGTTGGAAACGCTGTCAATACTCATTCAGTGAAGTTGACTGGGCACTTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497978.1
CDS TCA 72 bp CACTACATTCAAAAGTGCCCAGTCAACTTCACTGAATaGGTATTGACAGCGTTTCCAACATACAATAAACTT +
Preference number: 6 (lower is better)
Translates to: HYIQKCPVNFTE*VLTAFPTYNKL
Trigger: AAGTTTATTGTATGTTGGAAACGCTGTCAATACTCATTCAGTGAAGTTGACTGGGCACTTTTGAATGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497978.1