RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUCB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000070081

Ensembl transcript IDs: ENST00000323688.10, ENST00000458064.6, ENST00000525637.1, ENST00000527580.5, ENST00000527735.1, ENST00000528644.5, ENST00000529010.6, ENST00000529313.5, ENST00000530527.5, ENST00000531172.5, ENST00000532240.2, ENST00000533511.6, ENST00000533738.6, ENST00000533773.5, ENST00000533926.5, ENST00000620945.1, ENST00000622082.4, ENST00000646648.1

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCAGTTATGGGGATCGTCAACATGTGCCTTCTAATAGGATACACTaGGCATCTCTTCTGTGGTATTCAAGGGACATTGTACAACATAAT +
Preference number: 1 (lower is better)
Translates to: VSYGDRQHVPSNRIH*ASLLWYSRDIVQHN
Trigger: ATTATGTTGTACAATGTCCCTTGAATACCACAGAAGAGATGCTCAGTGTATCCTATTAGAAGGCACATGTTGACGATCCCCATAACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533773.5
3UTR GCA 90 bp AGAACTGTTGCTGATCTAATGTCAGTTATGGGGATCGTCAACATGTaGCTTCTAATAGGATACACTGAGCATCTCTTCTGTGGTATTCAA +
Preference number: 1 (lower is better)
Translates to: RTVADLMSVMGIVNM*LLIGYTEHLFCGIQ
Trigger: TTGAATACCACAGAAGAGATGCTCAGTGTATCCTATTAGAAGGCACATGTTGACGATCCCCATAACTGACATTAGATCAGCAACAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533773.5
3UTR TCA 90 bp AAAAGACTGCATTTCCTAATCATTCTGGAACTAAATGTGGCCATATaGCCAAGTTCTGGCCAAAGTAATATAAATGGAAATGTTCTGTGT +
Preference number: 1 (lower is better)
Translates to: KRLHFLIILELNVAI*PSSGQSNINGNVLC
Trigger: ACACAGAACATTTCCATTTATATTACTTTGGCCAGAACTTGGTCATATGGCCACATTTAGTTCCAGAATGATTAGGAAATGCAGTCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR-3UTR TCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCGTGAAGAACTGTTGCTaGTCTAATGTCAGTTATGGG +
Preference number: 2 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIVKNCC*SNVSYG
Trigger: CCCATAACTGACATTAGATCAGCAACAGTTCTTCAC...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
3UTR-3UTR TCA 90 bp CCAAGTTCTGGTGGACTTCAGACTTTAAATGTGTGGCTCAAACTTCAATTCTCCGTTCCATCTGCTGTATaGCCTGATGATATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: PSSGGLQTLNVWLKLQFSVPSAV*PDDIPA
Trigger: AGCTGGAATATCATCAGGTCATACAGCAGATGGAAC...GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTGAAGTCCACCAGAACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
3UTR-3UTR TCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTGTGAAGAACTGTTGCTaGTCTAATGTCTCCCAGCTA +
Preference number: 2 (lower is better)
Translates to: HIASNLLLEYHIQFWNHIVKNCC*SNVSQL
Trigger: TAGCTGGGAGACATTAGATCAGCAACAGTTCTTCAC...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR-3UTR TCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTCTAAATGTGGCCATATaGCCAAGTTCTGGCCAAAGT +
Preference number: 2 (lower is better)
Translates to: HIASNLLLEYHIQFWNHILNVAI*PSSGQS
Trigger: ACTTTGGCCAGAACTTGGTCATATGGCCACATTTAG...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR-3UTR TCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTTTAGTTCTTCCTCTGTaGAGAACTGTTGCTGATCTA +
Preference number: 2 (lower is better)
Translates to: HIASNLLLEYHIQFWNHILVLPL*RTVADL
Trigger: TAGATCAGCAACAGTTCTTCACAGAGGAAGAACTAA...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR-3UTR GCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTCAGTATGGCAGAGACTaGTATTTGTCAACCAATATC +
Preference number: 2 (lower is better)
Translates to: HIASNLLLEYHIQFWNHIQYGRD*YLSTNI
Trigger: GATATTGGTTGACAAATAGCAGTCTCTGCCATACTG...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR TCA 72 bp TCTGACAGCAGGATAGCAGATGTAATGCCTAGAGCTTaGGGAGACATCTTGCACCACAGTGTGGAAACCATG +
Preference number: 3 (lower is better)
Translates to: SDSRIADVMPRA*GDILHHSVETM
Trigger: CATGGTTTCCACACTGTGGTGCAAGATGTCTCCTCAAGCTCTAGGCATTACATCTGCTATCCTGCTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR GCA 72 bp CTTGAGGAGACATCTTGCACCACAGTGTGGAAACCATaGACTAGGACAAAGGGACAGCAAAAGAGAAGGGTT +
Preference number: 3 (lower is better)
Translates to: LEETSCTTVWKP*TRTKGQQKRRV
Trigger: AACCCTTCTCTTTTGCTGTCCCTTTGTCCTAGTGCATGGTTTCCACACTGTGGTGCAAGATGTCTCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR TCA 72 bp GGGGATCGTCAACATGTGCCTTCTAATAGGATACACTaGGCATCTCTTCTGTGGTATTCAAGGGACATTGTA +
Preference number: 3 (lower is better)
Translates to: GDRQHVPSNRIH*ASLLWYSRDIV
Trigger: TACAATGTCCCTTGAATACCACAGAAGAGATGCTCAGTGTATCCTATTAGAAGGCACATGTTGACGATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533773.5
3UTR CCA 72 bp CTCGTGAAACCTCTACCAGCTTTAGAAGGACACCTCTaGACCTTAGTATCCCAATTCCAACAGAAACAAATG +
Preference number: 3 (lower is better)
Translates to: LVKPLPALEGHL*TLVSQFQQKQM
Trigger: CATTTGTTTCTGTTGGAATTGGGATACTAAGGTCCAGAGGTGTCCTTCTAAAGCTGGTAGAGGTTTCACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR GCA 72 bp ATGCTGGTTGACACTGAGGTCATTTTTATGACACATTaGATCCAACTTGCTGTTGGAATATCACATACAATT +
Preference number: 3 (lower is better)
Translates to: MLVDTEVIFMTH*IQLAVGISHTI
Trigger: AATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTGTCATAAAAATGACCTCAGTGTCAACCAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
3UTR TCA 72 bp AGCACCCATAAAAGAATACCTATGTTTACGAGTAAGTaGGAGCAATCTAATTTAAAAGCAAGAGGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: STHKRIPMFTSK*EQSNLKARGRV
Trigger: AACTCTGCCTCTTGCTTTTAAATTAGATTGCTCTCACTTACTCGTAAACATAGGTATTCTTTTATGGGTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGAGCGAGGCTGCGCCTaGTGCTTGCGTCCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRERGCA*CLRPAH
Trigger: GTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR GCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCCTCGGCGAGCGAGGCTaGGCCTGGTGCTTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFLGERG*AWCLRP
Trigger: TGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAG...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR GCA 90 bp ACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGTGAAACCTCTACCAGCACAGTGTGGAAACCATaGACTAGGACAAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: TAKEKGSGSLMTRETSTSTVWKP*TRTKGQ
Trigger: CTGTCCCTTTGTCCTAGTGCATGGTTTCCACACTGT...GCTGGTAGAGGTTTCACGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp GCACTAGGACAAAGGGACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGTGGAAATGTTCTGTGTaGCTTCTGGGAAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: ALGQRDSKREGFWVPDDSWKCSV*LLGNVL
Trigger: AAGGACATTTCCCAGAAGTCACACAGAACATTTCCA...CGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGTCCCTTTGTCCTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGCTGCGCCTGGTGCTTaGGTCCAGCGCACAAACCTG +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRAAPGA*VQRTNL
Trigger: CAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR TCA 90 bp GCACTAGGACAAAGGGACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGTTTGTCCTCACATGGTaGCTTACTAAATCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ALGQRDSKREGFWVPDDSFVLTW*LTKSSS
Trigger: AGAACTGGATTTAGTAAGTCACCATGTGAGGACAAA...CGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGTCCCTTTGTCCTAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTTGCACATGGGTAGCTTaGGCCTTCCAGAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PASEPPVDHADVVALLFVCTWVA*AFQKLL
Trigger: CAAAAGCTTCTGGAAGGCTCAAGCTACCCATGTGCA...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR TCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCCCCCTTCCTTCTTTCTaGCAGCAGGATAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIPLPSF*QQDSRC
Trigger: ACATCTGCTATCCTGCTGTCAGAAAGAAGGAAGGGG...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCCGAGGCTGCGCCTGGTaGTTGCGTCCAGCGCACAAA +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFRGCAW*LRPAHK
Trigger: TTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCG...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR GCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCCACGTTCTTCTCTCTTaGCCATTCGCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIHVLLS*PFADSS
Trigger: AGAGCTGTCTGCGAATGGGCAAGAGAGAAGAACGTG...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR CCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCCCTTCCAGAAGCTTTTaGAGCCACAGGCTGTTTACG +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIPSRSF*SHRLFT
Trigger: CGTAAACAGCCTGTGGCTCCAAAAGCTTCTGGAAGG...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR CCA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTCCTTCCAGAAGCTTTTaGAGCCACAGGCTGTTTACG +
Preference number: 4 (lower is better)
Translates to: PASEPPVDHADVVALLFVPSRSF*SHRLFT
Trigger: CGTAAACAGCCTGTGGCTCCAAAAGCTTCTGGAAGG...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR TCA 90 bp ACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGTGAAACCTCTACCAGCCACTTGTTGCCGCTTTaGTTAGCATATCTAAATCTG +
Preference number: 4 (lower is better)
Translates to: TAKEKGSGSLMTRETSTSHLLPL*LAYLNL
Trigger: CAGATTTAGATATGCTAATCAAAGCGGCAACAAGTG...GCTGGTAGAGGTTTCACGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp ACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGTGAAACCTCTACCAGCTTAGTTCTTCCTCTGTaGAGAACTGTTGCTGATCTA +
Preference number: 4 (lower is better)
Translates to: TAKEKGSGSLMTRETSTSLVLPL*RTVADL
Trigger: TAGATCAGCAACAGTTCTTCACAGAGGAAGAACTAA...GCTGGTAGAGGTTTCACGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp ATTCCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTAATGCCTAGAGCTTaGGGAGACATCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: IPASEPPVDHADVVALLFVMPRA*GDILHH
Trigger: GTGGTGCAAGATGTCTCCTCAAGCTCTAGGCATTAC...AAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp ATTCCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTCTTTCCTCTGCATCCTaGCCCAGAGAACAGACATCT +
Preference number: 4 (lower is better)
Translates to: IPASEPPVDHADVVALLFLSSAS*PREQTS
Trigger: AGATGTCTGTTCTCTGGGGCAGGATGCAGAGGAAAG...AAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCACTCGTAACACGTTCTaGCCGGGTCTCGGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFTRNTF*PGLGER
Trigger: TCGCTCGCCGAGACCCGGCCAGAACGTGTTACGAGT...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR CCA 90 bp ACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGTGAAACCTCTACCAGCATTGTACTTCATGGGTaGCTCAAACTTCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: TAKEKGSGSLMTRETSTSIVLHG*LKLQFS
Trigger: GGAGAATTGAAGTTTGAGCCACCCATGAAGTACAAT...GCTGGTAGAGGTTTCACGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCTTCCAGGAGATTTCTTaGTTTCCTTTGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIFQEIS*FPLAQL
Trigger: CAGCTGAGCCAAAGGAAATCAAGAAATCTCCTGGAA...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCATTGGTGCACAGCATTaGGACACGGTATTCAAATGC +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIIGAQH*DTVFKC
Trigger: GCATTTGAATACCGTGTCTCAATGCTGTGCACCAAT...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTGAGCTTGGTGGTCCATaGCTATATCTTGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: PASEPPVDHADVVALLFVELGGP*LYLEGN
Trigger: ATTCCCTTCAAGATATAGGCATGGACCACCAAGCTC...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR GCA 90 bp ATGTGCCTTCTAATAGGATACACTGAGCATCTCTTCTGTGGTATTCAAGGGACACTTTCCTCTGCATCCTaGCCCAGAGAACAGACATCT +
Preference number: 4 (lower is better)
Translates to: MCLLIGYTEHLFCGIQGTLSSAS*PREQTS
Trigger: AGATGTCTGTTCTCTGGGGCAGGATGCAGAGGAAAG...TGTCCCTTGAATACCACAGAAGAGATGCTCAGTGTATCCTATTAGAAGGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CCA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTTGCTTCCCTGTGAACTaGGTGATTAACTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PASEPPVDHADVVALLFVCFPVN*VINFRV
Trigger: CACCCTAAAGTTAATCACCCAGTTCACAGGGAAGCA...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGTTCCATCTGCTGTATaGCCTCCCAGCTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRVPSAV*PPSYLA
Trigger: AGCCAGATAGCTGGGAGGTCATACAGCAGATGGAAC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527735.1
CDS-3UTR TCA 90 bp ATTCCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTCTAAATGTGGCCATATaGCCAAGTTCTGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: IPASEPPVDHADVVALLFLNVAI*PSSGQS
Trigger: ACTTTGGCCAGAACTTGGTCATATGGCCACATTTAG...AAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTGATGTCATAGGGGGATaGTACAAAGAGATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PASEPPVDHADVVALLFVDVIGG*YKEMCK
Trigger: TTTGCACATCTCTTTGTATCATCCCCCTATGACATC...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTAAAATAGTGAAGAGATaGGTCTTGGCTCCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PASEPPVDHADVVALLFVKIVKR*VLAPSS
Trigger: TGAGCTAGGAGCCAAGACCCATCTCTTCACTATTTT...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR TCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCTCCAGAGAGGTAAGATaGCTTGCACAATACCAAAAT +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLISREVR*LAQYQN
Trigger: ATTTTGGTATTGTGCAAGTCATCTTACCTCTCTGGA...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR TCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCGATGAGATTAACACATaGTGTCATAGGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIDEINT*CHRGMI
Trigger: TATCATCCCCCTATGACATCATGTGTTAATCTCATC...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCATAAAGTCCAGTATCTaGTGGTTCTATCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIIKSSI*WFYLRT
Trigger: AGTGCGAAGATAGAACCACCAGATACTGGACTTTAT...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR CCA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTTTGATCTTTGCTTCCTaGGTGATTAACTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PASEPPVDHADVVALLFVLIFAS*VINFRV
Trigger: CACCCTAAAGTTAATCACCCAGGAAGCAAAGATCAA...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCGTTCTGTGTGACTTCTaGGAAATGTCCTTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIVLCDF*EMSLKR
Trigger: TCTCTTTAAGGACATTTCCCAGAAGTCACACAGAAC...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp TTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTCCTCTTGATTGTTGCACATGGGTAGCTTaGGCCTTCCAGAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FCGIQGTLYNIIVCPLDCCTWVA*AFQKLL
Trigger: CAAAAGCTTCTGGAAGGCTCAAGCTACCCATGTGCA...ACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR GCA 90 bp AGGGCTTCTAATTCTTGTTCATCCAGGAATCCATCACTATTGACATCATGTAATCACGTTCTTCTCTCTTaGCCATTCGCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: RASNSCSSRNPSLLTSCNHVLLS*PFADSS
Trigger: AGAGCTGTCTGCGAATGGGCAAGAGAGAAGAACGTG...ATTACATGATGTCAATAGTGATGGATTCCTGGATGAACAAGAATTAGAAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCCAGACTTTAAATGTGTaGCTCAAACTTCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIQTLNV*LKLQFS
Trigger: GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTG...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CCA 90 bp ATGTGCCTTCTAATAGGATACACTGAGCATCTCTTCTGTGGTATTCAAGGGACACTTGATTGTTTCAGATaGAAGGAGACTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: MCLLIGYTEHLFCGIQGTLDCFR*KETPSY
Trigger: ATAGCTGGGAGTCTCCTTCCATCTGAAACAATCAAG...TGTCCCTTGAATACCACAGAAGAGATGCTCAGTGTATCCTATTAGAAGGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CCA 90 bp ATTCCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTACGGTATTCAAATGCTaGTTGACACTGAGGTCATTT +
Preference number: 4 (lower is better)
Translates to: IPASEPPVDHADVVALLFTVFKC*LTLRSF
Trigger: AAATGACCTCAGTGTCAACCAGCATTTGAATACCGT...AAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGTGAAGAACTGTTGCTaGTCTAATGTCTCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRVKNCC*SNVSQL
Trigger: TAGCTGGGAGACATTAGATCAGCAACAGTTCTTCAC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529010.6
ENST00000622082.4
CDS-3UTR TCA 90 bp ACTGAGCATCTCTTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTGTTCCATCTGCTGTATaGCCTGATGATATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TEHLFCGIQGTLYNIIVCVPSAV*PDDIPA
Trigger: AGCTGGAATATCATCAGGTCATACAGCAGATGGAAC...ACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAAGAGATGCTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR TCA 90 bp CCAAGTTCTGGTGGACTTCAGACTTTAAATGTGTGGCTCAAACTTCAATTCTCCAATAGTCTGTCCTCTTaGTTGTTTCAGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PSSGGLQTLNVWLKLQFSNSLSS*LFQMEG
Trigger: TCCTTCCATCTGAAACAATCAAGAGGACAGACTATT...GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTGAAGTCCACCAGAACTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR GCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGAGCTTGGTGGTCCATaGCTATATCTTGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRELGGP*LYLEGN
Trigger: ATTCCCTTCAAGATATAGGCATGGACCACCAAGCTC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR GCA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTATTTTTATGACACATTaGATCCAACTTGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: PASEPPVDHADVVALLFVIFMTH*IQLAVG
Trigger: TCCAACAGCAAGTTGGATGCAATGTGTCATAAAAAT...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp ACTGAGCATCTCTTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTAATACTGTAGCAGGATaGTCCTCCACCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: TEHLFCGIQGTLYNIIVCNTVAG*SSTSCS
Trigger: TGAACATGAGGTGGAGGACCATCCTGCTACAGTATT...ACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAAGAGATGCTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CCA 90 bp CCAAGTTCTGGTGGACTTCAGACTTTAAATGTGTGGCTCAAACTTCAATTCTCCTCTATGTCTGCTTTCTaGAGCTTTTCTCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PSSGGLQTLNVWLKLQFSSMSAF*SFSLKC
Trigger: ACACTTCAGAGAAAAGCTCCAGAAAGCAGACATAGA...GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTGAAGTCCACCAGAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CCA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCGCATATCTAAATCTGTaGATTCAAACTTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIAYLNL*IQTCQD
Trigger: ATCCTGACAAGTTTGAATCCACAGATTTAGATATGC...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR CCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTAAGTTGAGGCACCAGTaGTTAAGGGTGAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HIASNLLLEYHIQFWNHIKLRHQ*LRVKVD
Trigger: GTCCACCTTCACCCTTAACCACTGGTGCCTCAACTT...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGTGAAGAACTGTTGCTaGTCTAATGTCTCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFVKNCC*SNVSQL
Trigger: TAGCTGGGAGACATTAGATCAGCAACAGTTCTTCAC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529010.6
ENST00000622082.4
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGTTCCATCTGCTGTATaGCCTGATGATATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFVPSAV*PDDIPA
Trigger: AGCTGGAATATCATCAGGTCATACAGCAGATGGAAC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp AGGGCTTCTAATTCTTGTTCATCCAGGAATCCATCACTATTGACATCATGTAATGTTCCATCTGCTGTATaGCCTGATGATATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RASNSCSSRNPSLLTSCNVPSAV*PDDIPA
Trigger: AGCTGGAATATCATCAGGTCATACAGCAGATGGAAC...ATTACATGATGTCAATAGTGATGGATTCCTGGATGAACAAGAATTAGAAGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGCTTGGAAATCCTGTCTaGTTACTGCTACCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRLGNPV*LLLPLP
Trigger: AGGCAGAGGTAGCAGTAATCAGACAGGATTTCCAAG...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp TCCAGAGTCACCAATCTGTCTTTGTTAGTATCAACCTCATTCATTACATGTTCCCTGCATGACAAACGATaGAGCTCATCATCTAACTCT +
Preference number: 4 (lower is better)
Translates to: SRVTNLSLLVSTSFITCSLHDKR*SSSSNS
Trigger: AGAGTTAGATGATGAGCTTCATCGTTTGTCATGCAG...GGAACATGTAATGAATGAGGTTGATACTAACAAAGACAGATTGGTGACTCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp CCAAGTTCTGGTGGACTTCAGACTTTAAATGTGTGGCTCAAACTTCAATTCTCCTATTTCCTCTATGTCTaGTTTCTGGAGCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PSSGGLQTLNVWLKLQFSYFLYV*FLELFS
Trigger: AGAGAAAAGCTCCAGAAAGCAGACATAGAGGAAATA...GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTGAAGTCCACCAGAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR GCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGAGCTTGGTGGTCCATaGCTATATCTTGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFELGGP*LYLEGN
Trigger: ATTCCCTTCAAGATATAGGCATGGACCACCAAGCTC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR GCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTCTTGAGGAGACATCTTaGACCACAGTGTGGAAACCA +
Preference number: 4 (lower is better)
Translates to: HIASNLLLEYHIQFWNHILEETS*TTVWKP
Trigger: TGGTTTCCACACTGTGGTGCAAGATGTCTCCTCAAG...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGTATCTTCCCACTCACTaGAATCTTGGGTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRYLPTH*NLGLQS
Trigger: GGACTGCAACCCAAGATTGCAGTGAGTGGGAAGATA...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAAAAATAGTGAAGAGATaGGTCTTGGCTCCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRKIVKR*VLAPSS
Trigger: TGAGCTAGGAGCCAAGACCCATCTCTTCACTATTTT...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529010.6
ENST00000533773.5
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAATACTGTAGCAGGATaGTCCTCCACCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFNTVAG*SSTSCS
Trigger: TGAACATGAGGTGGAGGACCATCCTGCTACAGTATT...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529010.6
ENST00000533773.5
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAAAGTCCAGTATCTGGTaGTTCTATCTTCGCACTTTC +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRKSSIW*FYLRTF
Trigger: GAAAGTGCGAAGATAGAACCACCAGATACTGGACTT...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp TCCAGAGTCACCAATCTGTCTTTGTTAGTATCAACCTCATTCATTACATGTTCCAAGTCCAGTATCTGGTaGTTCTATCTTCGCACTTTC +
Preference number: 4 (lower is better)
Translates to: SRVTNLSLLVSTSFITCSKSSIW*FYLRTF
Trigger: GAAAGTGCGAAGATAGAACCACCAGATACTGGACTT...GGAACATGTAATGAATGAGGTTGATACTAACAAAGACAGATTGGTGACTCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp ATTCCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGCATATCTAAATCTGTaGATTCAAACTTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: IPASEPPVDHADVVALLFAYLNL*IQTCQD
Trigger: ATCCTGACAAGTTTGAATCCACAGATTTAGATATGC...AAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR CCA 90 bp ATGTGCCTTCTAATAGGATACACTGAGCATCTCTTCTGTGGTATTCAAGGGACATCTTCCAAGTTCTGGTaGACTTCAGACTTTAAATGT +
Preference number: 4 (lower is better)
Translates to: MCLLIGYTEHLFCGIQGTSSKFW*TSDFKC
Trigger: ACATTTAAAGTCTGAAGTCCACCAGAACTTGGAAGA...TGTCCCTTGAATACCACAGAAGAGATGCTCAGTGTATCCTATTAGAAGGCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAAGAAAGATAGGAACCTaGACACCACCTACTTCTAGA +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRRKIGT*TPPTSR
Trigger: TCTAGAAGTAGGTGGTGTCCAGGTTCCTATCTTTCT...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529010.6
3UTR CAA 72 bp GCTTTCAAAAACTCCTCCAGAGTCACCAATCTGTCTTaGTTAGTATCAACCTCATTCATTACATGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AFKNSSRVTNLS*LVSTSFITCSL
Trigger: GAGGGAACATGTAATGAATGAGGTTGATACTAACAAAGACAGATTGGTGACTCTGGAGGAGTTTTTGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATCCAGAGAGGTAAGATaGCTTGCACAATACCAAAAT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRSREVR*LAQYQN
Trigger: ATTTTGGTATTGTGCAAGTCATCTTACCTCTCTGGA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529010.6
ENST00000533773.5
CDS-3UTR TCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATTTGTCCTCACATGGTaGCTTACTAAATCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRFVLTW*LTKSSS
Trigger: AGAACTGGATTTAGTAAGTCACCATGTGAGGACAAA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGACACTTGTTGCCGCTTTaGTTAGCATATCTAAATCTG +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRHLLPL*LAYLNL
Trigger: CAGATTTAGATATGCTAATCAAAGCGGCAACAAGTG...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGGTGAAGAACTGTTGCTaGTCTAATGTCTCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRVKNCC*SNVSQL
Trigger: TAGCTGGGAGACATTAGATCAGCAACAGTTCTTCAC...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATTAGTTCTTCCTCTGTaGAGAACTGTTGCTGATCTA +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRLVLPL*RTVADL
Trigger: TAGATCAGCAACAGTTCTTCACAGAGGAAGAACTAA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp TTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTCCTCTTGATTGTGTGAAGAACTGTTGCTaGTCTAATGTCAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: FCGIQGTLYNIIVCPLDCVKNCC*SNVSYG
Trigger: CCCATAACTGACATTAGATCAGCAACAGTTCTTCAC...ACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR GCA 90 bp AGGGCTTCTAATTCTTGTTCATCCAGGAATCCATCACTATTGACATCATGTAATATCCTGTCTGATTACTaGTACCTCTGCCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: RASNSCSSRNPSLLTSCNILSDY*YLCLHV
Trigger: AACATGAAGGCAGAGGTAGCAGTAATCAGACAGGAT...ATTACATGATGTCAATAGTGATGGATTCCTGGATGAACAAGAATTAGAAGCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTGACACGGTATTCAAATaGTGGTTGACACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HIASNLLLEYHIQFWNHIDTVFK*WLTLRS
Trigger: TGACCTCAGTGTCAACCAGCATTTGAATACCGTGTC...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAAAATAGTGAAGAGATaGGTCTTGGCTCCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFKIVKR*VLAPSS
Trigger: TGAGCTAGGAGCCAAGACCCATCTCTTCACTATTTT...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529010.6
ENST00000533773.5
CDS-3UTR CCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTAATACTGTAGCAGGATaGTCCTCCACCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: HIASNLLLEYHIQFWNHINTVAG*SSTSCS
Trigger: TGAACATGAGGTGGAGGACCATCCTGCTACAGTATT...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAAGTCCAGTATCTGGTaGTTCTATCTTCGCACTTTC +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFKSSIW*FYLRTF
Trigger: GAAAGTGCGAAGATAGAACCACCAGATACTGGACTT...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp TTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTCCTCTTGATTGTAAGTCCAGTATCTGGTaGTTCTATCTTCGCACTTTC +
Preference number: 4 (lower is better)
Translates to: FCGIQGTLYNIIVCPLDCKSSIW*FYLRTF
Trigger: GAAAGTGCGAAGATAGAACCACCAGATACTGGACTT...ACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAATAAAGTCCAGTATCTaGTGGTTCTATCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRIKSSI*WFYLRT
Trigger: AGTGCGAAGATAGAACCACCAGATACTGGACTTTAT...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATCTATGTCTGCTTTCTaGAGCTTTTCTCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRSMSAF*SFSLKC
Trigger: ACACTTCAGAGAAAAGCTCCAGAAAGCAGACATAGA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp TCCAGAGTCACCAATCTGTCTTTGTTAGTATCAACCTCATTCATTACATGTTCCTCTATGTCTGCTTTCTaGAGCTTTTCTCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SRVTNLSLLVSTSFITCSSMSAF*SFSLKC
Trigger: ACACTTCAGAGAAAAGCTCCAGAAAGCAGACATAGA...GGAACATGTAATGAATGAGGTTGATACTAACAAAGACAGATTGGTGACTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATGTTTTAGAAGAGCTTaGTGGTCCATGCCTATATCT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRCFRRA*WSMPIS
Trigger: AGATATAGGCATGGACCACCAAGCTCTTCTAAAACA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATTGATCTTTGCTTCCTaGGTGATTAACTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRLIFAS*VINFRV
Trigger: CACCCTAAAGTTAATCACCCAGGAAGCAAAGATCAA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTTTTTCACTAAAAACTaGCTCGTAACACGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFFFTKN*LVTRSG
Trigger: GCCAGAACGTGTTACGAGTCAGTTTTTAGTGAAAAA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR TCA 90 bp TTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTCCTCTTGATTGTTCCAGAGAGGTAAGATaGCTTGCACAATACCAAAAT +
Preference number: 4 (lower is better)
Translates to: FCGIQGTLYNIIVCPLDCSREVR*LAQYQN
Trigger: ATTTTGGTATTGTGCAAGTCATCTTACCTCTCTGGA...ACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGCACTTTCCACAGGGTaGATATTTTGTACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFALSTG*IFCTFV
Trigger: GACAAAAGTACAAAATATTCACCCTGTGGAAAGTGC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTTTGTCCTCACATGGTaGCTTACTAAATCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFFVLTW*LTKSSS
Trigger: AGAACTGGATTTAGTAAGTCACCATGTGAGGACAAA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCCACTTGTTGCCGCTTTaGTTAGCATATCTAAATCTG +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFHLLPL*LAYLNL
Trigger: CAGATTTAGATATGCTAATCAAAGCGGCAACAAGTG...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp TTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTCCTCTTGATTGTCACTTGTTGCCGCTTTaGTTAGCATATCTAAATCTG +
Preference number: 4 (lower is better)
Translates to: FCGIQGTLYNIIVCPLDCHLLPL*LAYLNL
Trigger: CAGATTTAGATATGCTAATCAAAGCGGCAACAAGTG...ACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTTAGTTCTTCCTCTGTaGAGAACTGTTGCTGATCTA +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFLVLPL*RTVADL
Trigger: TAGATCAGCAACAGTTCTTCACAGAGGAAGAACTAA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGTGAAGAACTGTTGCTaGTCTAATGTCTCATTCATT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRVKNCC*SNVSFI
Trigger: AATGAATGAGACATTAGATCAGCAACAGTTCTTCAC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458064.6
ENST00000527580.5
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTCTAATAGGATACACTaGGCATCTCTTCTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFSNRIH*ASLLWY
Trigger: ATACCACAGAAGAGATGCTCAGTGTATCCTATTAGA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR GCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAAACCTTCCTACTTCTTaGCTTTTCAGTTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRNLPTS*LFSSSS
Trigger: ACTTGATGAACTGAAAAGGCAAGAAGTAGGAAGGTT...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR GCA 90 bp ACTGAGCATCTCTTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTAACCTTCCTACTTCTTaGCTTTTCAGTTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: TEHLFCGIQGTLYNIIVCNLPTS*LFSSSS
Trigger: ACTTGATGAACTGAAAAGGCAAGAAGTAGGAAGGTT...ACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAAGAGATGCTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR GCA 90 bp TCCAGAGTCACCAATCTGTCTTTGTTAGTATCAACCTCATTCATTACATGTTCCAACCTTCCTACTTCTTaGCTTTTCAGTTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: SRVTNLSLLVSTSFITCSNLPTS*LFSSSS
Trigger: ACTTGATGAACTGAAAAGGCAAGAAGTAGGAAGGTT...GGAACATGTAATGAATGAGGTTGATACTAACAAAGACAGATTGGTGACTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTCTTTTAGTTGATCTTTaGTTCCCTGTGAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: HIASNLLLEYHIQFWNHILLVDL*FPVNWV
Trigger: CACCCAGTTCACAGGGAAGCAAAGATCAACTAAAAG...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCATAAAGTCCAGTATCTaGTGGTTCTATCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFIKSSI*WFYLRT
Trigger: AGTGCGAAGATAGAACCACCAGATACTGGACTTTAT...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTCTATGTCTGCTTTCTaGAGCTTTTCTCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFSMSAF*SFSLKC
Trigger: ACACTTCAGAGAAAAGCTCCAGAAAGCAGACATAGA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp AGGGCTTCTAATTCTTGTTCATCCAGGAATCCATCACTATTGACATCATGTAATTGTTTTAGAAGAGCTTaGTGGTCCATGCCTATATCT +
Preference number: 4 (lower is better)
Translates to: RASNSCSSRNPSLLTSCNCFRRA*WSMPIS
Trigger: AGATATAGGCATGGACCACCAAGCTCTTCTAAAACA...ATTACATGATGTCAATAGTGATGGATTCCTGGATGAACAAGAATTAGAAGCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTTGATCTTTGCTTCCTaGGTGATTAACTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFLIFAS*VINFRV
Trigger: CACCCTAAAGTTAATCACCCAGGAAGCAAAGATCAA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGACAGACTTTAAATGTGTaGCTCAAACTTCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRQTLNV*LKLQFS
Trigger: GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTG...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000527735.1
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATCTTCCAAGTTCTGGTaGACTTCAGACTTTAAATGT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRSSKFW*TSDFKC
Trigger: ACATTTAAAGTCTGAAGTCCACCAGAACTTGGAAGA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000527735.1
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR TCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGTGAAGAACTGTTGCTaGTCTAATGTCTCATTCATT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFVKNCC*SNVSFI
Trigger: AATGAATGAGACATTAGATCAGCAACAGTTCTTCAC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458064.6
ENST00000527580.5
CDS-3UTR TCA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGGATAAAAATCCTGCATaGCAAACGATGAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRDKNPA*QTMKLI
Trigger: GATGAGCTTCATCGTTTGTCATGCAGGATTTTTATC...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp CACATTGCATCCAACTTGCTGTTGGAATATCACATACAATTTTGGAACCATATTCTGAGGTCATTTTTATaGCACATTGCATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: HIASNLLLEYHIQFWNHILRSFL*HIASNL
Trigger: CAAGTTGGATGCAATGTGTCATAAAAATGACCTCAG...AATATGGTTCCAAAATTGTATGTGATATTCCAACAGCAAGTTGGATGCAATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR TCA 90 bp AGGGCTTCTAATTCTTGTTCATCCAGGAATCCATCACTATTGACATCATGTAATTTTTCAATTTCTTCTTaGTTGTACTTCATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RASNSCSSRNPSLLTSCNFSISS*LYFMGG
Trigger: GCCACCCATGAAGTACAATCAAGAAGAAATTGAAAA...ATTACATGATGTCAATAGTGATGGATTCCTGGATGAACAAGAATTAGAAGCCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR GCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTATTTCCTCTATGTCTaGTTTCTGGAGCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFYFLYV*FLELFS
Trigger: AGAGAAAAGCTCCAGAAAGCAGACATAGAGGAAATA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR GCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAACCTTCCTACTTCTTaGCTTTTCAGTTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFNLPTS*LFSSSS
Trigger: ACTTGATGAACTGAAAAGGCAAGAAGTAGGAAGGTT...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGATAAAGTCCAGTATCTaGTGGTTCTATCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRIKSSI*WFYLRT
Trigger: AGTGCGAAGATAGAACCACCAGATACTGGACTTTAT...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGCATATCTAAATCTGTaGATTCAAACTTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRAYLNL*IQTCQD
Trigger: ATCCTGACAAGTTTGAATCCACAGATTTAGATATGC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCCAGACTTTAAATGTGTaGCTCAAACTTCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFQTLNV*LKLQFS
Trigger: GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTG...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000527735.1
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTCTTCCAAGTTCTGGTaGACTTCAGACTTTAAATGT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFSSKFW*TSDFKC
Trigger: ACATTTAAAGTCTGAAGTCCACCAGAACTTGGAAGA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458064.6
ENST00000527580.5
ENST00000527735.1
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGCCTCCAATATTTTCCTaGGCACAGGGATCAATAAAA +
Preference number: 4 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRPPIFS*AQGSIK
Trigger: TTTTATTGATCCCTGTGCCCAGGAAAATATTGGAGG...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CCA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGCATATCTAAATCTGTaGATTCAAACTTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFAYLNL*IQTCQD
Trigger: ATCCTGACAAGTTTGAATCCACAGATTTAGATATGC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CCA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGCTTGATTGTACTTCATaGGTGGCTCAAACTTCAATT +
Preference number: 4 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRLDCTS*VAQTSI
Trigger: AATTGAAGTTTGAGCCACCCATGAAGTACAATCAAG...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS GCA 90 bp CGCGCGGCCACCGGCCTTACCTGGCCGGGTCTCGGCGAGCGAGGCTaGGCCTGGTGCTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RAATGLTWPGLGERG*AWCLRPAHKPVLQP
Trigger: GGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGGTAAGGCCGGTGGCCGCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531172.5
ENST00000533511.6
CDS CCA 90 bp GCCACCGGCCTTACCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTaGTGCTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: ATGLTWPGLGERGCA*CLRPAHKPVLQPPA
Trigger: GGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGGTAAGGCCGGTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531172.5
ENST00000533511.6
CDS GCA 90 bp GCCTTACCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTGCTTaGGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCCCACCGCT +
Preference number: 5 (lower is better)
Translates to: ALPGRVSASEAAPGA*VQRTNLSSSPRPTA
Trigger: AGCGGTGGGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGGTAAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531172.5
ENST00000533511.6
CDS GCA 90 bp ACACGTTCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTGCTTaGGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCCCACCGCT +
Preference number: 5 (lower is better)
Translates to: TRSGRVSASEAAPGA*VQRTNLSSSPRPTA
Trigger: AGCGGTGGGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAACGTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323688.10
ENST00000529010.6
ENST00000533738.6
CDS GCA 90 bp TTCGTCTCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTGCTTaGGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCCCACCGCT +
Preference number: 5 (lower is better)
Translates to: FVSGRVSASEAAPGA*VQRTNLSSSPRPTA
Trigger: AGCGGTGGGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAGACGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525637.1
CDS GCA 90 bp AGCCAGCCACCCTCCTCGACCCCGAAGAAAGCTCGGGTGCCCAGCTaGGAGTGGAGCAGAGGGAACCCAGCGCCTCCGGCTCGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: SQPPSSTPKKARVPS*EWSRGNPAPPARAG
Trigger: CCCAGCGCGAGCCGGAGGCGCTGGGTTCCCTCTGCTCCACTCGCAGCTGGGCACCCGAGCTTTCTTCGGGGTCGAGGAGGGTGGCTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529313.5
CDS GCA 90 bp CCGCCAAGAGCCAGCCACCCTCCTCGACCCCGAAGAAAGCTCGGGTaGCCAGCTGCGAGTGGAGCAGAGGGAACCCAGCGCCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: PPRASHPPRPRRKLG*PAASGAEGTQRLRL
Trigger: GAGCCGGAGGCGCTGGGTTCCCTCTGCTCCACTCGCAGCTGGGCACCCGAGCTTTCTTCGGGGTCGAGGAGGGTGGCTGGCTCTTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529313.5
CDS CCA 90 bp ACTCGTAACACGTTCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTaGTGCTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: TRNTFWPGLGERGCA*CLRPAHKPVLQPPA
Trigger: GGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAACGTGTTACGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323688.10
ENST00000529010.6
ENST00000533738.6
CDS CCA 90 bp GTGAAACTTCGTCTCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTaGTGCTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: VKLRLWPGLGERGCA*CLRPAHKPVLQPPA
Trigger: GGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAGACGAAGTTTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525637.1
CDS GCA 90 bp AAACTGACTCGTAACACGTTCTGGCCGGGTCTCGGCGAGCGAGGCTaGGCCTGGTGCTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: KLTRNTFWPGLGERG*AWCLRPAHKPVLQP
Trigger: GGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAACGTGTTACGAGTCAGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323688.10
ENST00000529010.6
ENST00000533738.6
CDS GCA 90 bp AACATGGTGAAACTTCGTCTCTGGCCGGGTCTCGGCGAGCGAGGCTaGGCCTGGTGCTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: NMVKLRLWPGLGERG*AWCLRPAHKPVLQP
Trigger: GGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAGACGAAGTTTCACCATGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525637.1
CDS CCA 90 bp AATCACAAAGTAATCTCGGCGCCGCCAGGGGCCAAGACACAAATCTaGGAACCTCAGCCTAGATGGAGGAGGGTGCGGGGTCCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: NHKVISAPPGAKTQI*EPQPRWRRVRGPGR
Trigger: TCTCCCGGGACCCCGCACCCTCCTCCATCTAGGCTGAGGTTCCCAGATTTGTGTCTTGGCCCCTGGCGGCGCCGAGATTACTTTGTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528644.5
CDS TCA 90 bp CGGGAGGATCACTTGAGCTCAGAAGGCCGAGGCTGCAGTGAACCATaGTCATTGTGCCACAGAGTGAGACCCTGTCTTGGAAATCCTGTC +
Preference number: 5 (lower is better)
Translates to: REDHLSSEGRGCSEP*SLCHRVRPCLGNPV
Trigger: GACAGGATTTCCAAGACAGGGTCTCACTCTGTGGCACAATGATCATGGTTCACTGCAGCCTCGGCCTTCTGAGCTCAAGTGATCCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530527.5
CDS TCA 90 bp CGGGAGGATCACTTGAGCTCAGAAGGCCGAGGCTGCAGTGAACCATaGTCATTGTGCCACAGAGTGAGACCCTTGGAAATCCTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: REDHLSSEGRGCSEP*SLCHRVRPLEILSD
Trigger: ATCAGACAGGATTTCCAAGGGTCTCACTCTGTGGCACAATGATCATGGTTCACTGCAGCCTCGGCCTTCTGAGCTCAAGTGATCCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620945.1
CDS-3UTR CAA 90 bp GCACTAGGACAAAGGGACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGGCCTTCCAGAAGCTTTaGGAGCCACAGGCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: ALGQRDSKREGFWVPDDSAFQKL*EPQAVY
Trigger: GTAAACAGCCTGTGGCTCCAAAAGCTTCTGGAAGGC...CGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGTCCCTTTGTCCTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS TCA 90 bp CAGAAGGCCGAGGCTGCAGTGAACCATGATCATTGTGCCACAGAGTaGGACCCTGTCTTGGAAATCCTGTCTGATTACTGCTACCTCTGC +
Preference number: 5 (lower is better)
Translates to: QKAEAAVNHDHCATE*DPVLEILSDYCYLC
Trigger: GCAGAGGTAGCAGTAATCAGACAGGATTTCCAAGACAGGGTCTCACTCTGTGGCACAATGATCATGGTTCACTGCAGCCTCGGCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530527.5
CDS TCA 90 bp CAGAAGGCCGAGGCTGCAGTGAACCATGATCATTGTGCCACAGAGTaGGACCCTTGGAAATCCTGTCTGATTACTGCTACCTCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: QKAEAAVNHDHCATE*DPWKSCLITATSAF
Trigger: GAAGGCAGAGGTAGCAGTAATCAGACAGGATTTCCAAGGGTCTCACTCTGTGGCACAATGATCATGGTTCACTGCAGCCTCGGCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620945.1
CDS CCA 90 bp GAAGGCCCTAAATCTGGGGTTGGCTTAGTTGAGGAGGTAGGGCTTTaGGCAGTGAGACTTCTTGCCAACAGAAGTCAAGGTGAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: EGPKSGVGLVEEVGL*AVRLLANRSQGEVE
Trigger: CTCAACCTCACCTTGACTTCTGTTGGCAAGAAGTCTCACTGCCCAAAGCCCTACCTCCTCAACTAAGCCAACCCCAGATTTAGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS-3UTR CAA 90 bp ACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGTGAAACCTCTACCAGCACACGTTCTTCTCTCTaGCCCATTCGCAGACAGCTC +
Preference number: 5 (lower is better)
Translates to: TAKEKGSGSLMTRETSTSTRSSL*PIRRQL
Trigger: GAGCTGTCTGCGAATGGGCAAGAGAGAAGAACGTGT...GCTGGTAGAGGTTTCACGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS GCA 90 bp GTGGCCATCAGTGTGACCCAGTTCTGGTCGAAACATAAGTTCAGGTaGTGCTGGTTCTGGAAAATGGCCTCAGGGAAGCTAACTCAAGCA +
Preference number: 5 (lower is better)
Translates to: VAISVTQFWSKHKFR*CWFWKMASGKLTQA
Trigger: TGCTTGAGTTAGCTTCCCTGAGGCCATTTTCCAGAACCAGCAGCACCTGAACTTATGTTTCGACCAGAACTGGGTCACACTGATGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CCA 90 bp GACAGAGGCAGGAAGAGATGTATCTATTTTTGCTGGCATAAAGCATaGCAGAGGTGGTGTGGCTCTGGAACTGGCAACTGTTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: DRGRKRCIYFCWHKA*QRWCGSGTGNCSAG
Trigger: GCCTGCTGAACAGTTGCCAGTTCCAGAGCCACACCACCTCTGCCATGCTTTATGCCAGCAAAAATAGATACATCTCTTCCTGCCTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS-3UTR CAA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGGCTGCGCCTGGTGCTaGCGTCCAGCGCACAAACCT +
Preference number: 5 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRGCAWC*RPAHKP
Trigger: AGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR CAA 90 bp GCACTAGGACAAAGGGACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGGTCCATGCCTATATCTaGAAGGGAATCCAACTTAGC +
Preference number: 5 (lower is better)
Translates to: ALGQRDSKREGFWVPDDSVHAYI*KGIQLS
Trigger: GCTAAGTTGGATTCCCTTCAAGATATAGGCATGGAC...CGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGTCCCTTTGTCCTAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTCCACTCACTGCAATCTaGGGTTGCAGTCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: PASEPPVDHADVVALLFVPLTAI*GCSPEM
Trigger: CATCTCAGGACTGCAACCCAAGATTGCAGTGAGTGG...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS GCA 90 bp AGCCATCCTAGGGGAAGAGATCAGATTAAGACTGTTGCCATTCCATaGAAGCCTACAGTCTCAAAGGATCTCAAGGAGGTACCATTCCTG +
Preference number: 5 (lower is better)
Translates to: SHPRGRDQIKTVAIP*KPTVSKDLKEVPFL
Trigger: CAGGAATGGTACCTCCTTGAGATCCTTTGAGACTGTAGGCTTGCATGGAATGGCAACAGTCTTAATCTGATCTCTTCCCCTAGGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS-3UTR CAA 90 bp GCACTAGGACAAAGGGACAGCAAAAGAGAAGGGTTCTGGGTCCCTGATGACTCGCAGCACATCAATCACTaGCTTGAGATATTCATCATA +
Preference number: 5 (lower is better)
Translates to: ALGQRDSKREGFWVPDDSQHINH*LEIFII
Trigger: TATGATGAATATCTCAAGCAAGTGATTGATGTGCTG...CGAGTCATCAGGGACCCAGAACCCTTCTCTTTTGCTGTCCCTTTGTCCTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS TCA 90 bp CTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTCCTCTTaGTTGTTTCAGATGGAAGGAGACTCCCAGCTATCTGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LWYSRDIVQHNSLSS*LFQMEGDSQLSGSK
Trigger: CTTGGAGCCAGATAGCTGGGAGTCTCCTTCCATCTGAAACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CAA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCTCTGTGGATTCAAACTaGTCAGGATTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLISVDSN*SGFRWF
Trigger: AAACCACCTGAATCCTGACAAGTTTGAATCCACAGA...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR CAA 90 bp ACTGAGCATCTCTTCTGTGGTATTCAAGGGACATTGTACAACATAATAGTCTGTGCCTTCCAGAAGCTTTaGGAGCCACAGGCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: TEHLFCGIQGTLYNIIVCAFQKL*EPQAVY
Trigger: GTAAACAGCCTGTGGCTCCAAAAGCTTCTGGAAGGC...ACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAAGAGATGCTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CAA 90 bp CCAAGTTCTGGTGGACTTCAGACTTTAAATGTGTGGCTCAAACTTCAATTCTCCATGCACATGGGTAGCTaGAGCCTTCCAGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: PSSGGLQTLNVWLKLQFSMHMGS*SLPEAF
Trigger: AAAAGCTTCTGGAAGGCTCAAGCTACCCATGTGCAT...GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTGAAGTCCACCAGAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS CCA 90 bp CTCTCGGAAGAAGAAGGTACACAGAATTTAGGTAGCCAACAAGGCTaGCTGAGTTTAAAATCCAAAGTTGCCTACCAAACATTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LSEEEGTQNLGSQQG*LSLKSKVAYQTFPL
Trigger: AAGAGGGAATGTTTGGTAGGCAACTTTGGATTTTAAACTCAGCCAGCCTTGTTGGCTACCTAAATTCTGTGTACCTTCTTCTTCCGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS-3UTR CAA 90 bp CCAAGTTCTGGTGGACTTCAGACTTTAAATGTGTGGCTCAAACTTCAATTCTCCGTCCATGCCTATATCTaGAAGGGAATCCAACTTAGC +
Preference number: 5 (lower is better)
Translates to: PSSGGLQTLNVWLKLQFSVHAYI*KGIQLS
Trigger: GCTAAGTTGGATTCCCTTCAAGATATAGGCATGGAC...GGAGAATTGAAGTTTGAGCCACACATTTAAAGTCTGAAGTCCACCAGAACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CAA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTGATTCCTTGATTTCCTaGATTCCAGGAGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: PASEPPVDHADVVALLFVDSLIS*IPGDFL
Trigger: CAAGAAATCTCCTGGAATCAAGGAAATCAAGGAATC...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCACACGTTCTTCTCTCTaGCCCATTCGCAGACAGCTC +
Preference number: 5 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFTRSSL*PIRRQL
Trigger: GAGCTGTCTGCGAATGGGCAAGAGAGAAGAACGTGT...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CAA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCGGCAGAGACTGCTATTaGTCAACCAATATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIGRDCY*STNICF
Trigger: AAAACAGATATTGGTTGACAAATAGCAGTCTCTGCC...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp ATTCCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTTATTGGTGCACAGCATaGAGACACGGTATTCAAATG +
Preference number: 5 (lower is better)
Translates to: IPASEPPVDHADVVALLFYWCTA*RHGIQM
Trigger: CATTTGAATACCGTGTCTCAATGCTGTGCACCAATA...AAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGGAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCTCACTTGTTGCCGCTTaGATTAGCATATCTAAATCT +
Preference number: 5 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLISLVAA*ISISKS
Trigger: AGATTTAGATATGCTAATCAAAGCGGCAACAAGTGA...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533773.5
ENST00000646648.1
CDS-3UTR CAA 90 bp TTCCATCTGCTGTATGACCTGATGATATTCCAGCTTCTGAGCCTCCAGTTGATCGGTATTCAAGGGACATaGTACAACATAATAGTCTGT +
Preference number: 5 (lower is better)
Translates to: FHLLYDLMIFQLLSLQLIGIQGT*YNIIVC
Trigger: ACAGACTATTATGTTGTACAATGTCCCTTGAATACC...GATCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS-3UTR CAA 90 bp CCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTGTTTTTAAAAGTATTAAGTaGAGGCACCAGTGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: PASEPPVDHADVVALLFVFKSIK*RHQWLR
Trigger: CCTTAACCACTGGTGCCTCAACTTAATACTTTTAAA...AACAAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp ATTCCAGCTTCTGAGCCTCCAGTTGATCATGCTGACGTTGTAGCTCTTCTTTTTCATTTTTATGACACATaGCATCCAACTTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: IPASEPPVDHADVVALLFHFYDT*HPTCCW
Trigger: CCAACAGCAAGTTGGATGCAATGTGTCATAAAAATG...AAAAAGAAGAGCTACAACGTCAGCATGATCAACTGGAGGCTCAGAAGCTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGTCCATGCCTATATCTaGAAGGGAATCCAACTTAGC +
Preference number: 5 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRVHAYI*KGIQLS
Trigger: GCTAAGTTGGATTCCCTTCAAGATATAGGCATGGAC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp AGGGCTTCTAATTCTTGTTCATCCAGGAATCCATCACTATTGACATCATGTAATATGCACATGGGTAGCTaGAGCCTTCCAGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: RASNSCSSRNPSLLTSCNMHMGS*SLPEAF
Trigger: AAAAGCTTCTGGAAGGCTCAAGCTACCCATGTGCAT...ATTACATGATGTCAATAGTGATGGATTCCTGGATGAACAAGAATTAGAAGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS TCA 90 bp GATTTCCTTGATTCCAGGAGATTTCTTGATTTCCTTTGGCTCAGCTaGGAAACTCAAAATGTGTTTGACCTGCATTCCTGTGTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: DFLDSRRFLDFLWLS*ETQNVFDLHSCVLR
Trigger: TCTCAAAACACAGGAATGCAGGTCAAACACATTTTGAGTTTCTCAGCTGAGCCAAAGGAAATCAAGAAATCTCCTGGAATCAAGGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530527.5
CDS-3UTR CAA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAACTAAATCCAGTTCTTaGCTTAGCCTCCCACTCTTT +
Preference number: 5 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRTKSSS*LSLPLF
Trigger: AAAGAGTGGGAGGCTAAGCAAAGAACTGGATTTAGT...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGTCCATGCCTATATCTaGAAGGGAATCCAACTTAGC +
Preference number: 5 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFVHAYI*KGIQLS
Trigger: GCTAAGTTGGATTCCCTTCAAGATATAGGCATGGAC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATCTGTGGATTCAAACTaGTCAGGATTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRSVDSN*SGFRWF
Trigger: AAACCACCTGAATCCTGACAAGTTTGAATCCACAGA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS TCA 90 bp TCTAAATCTGTGGATTCAAACTTGTCAGGATTCAGGTGGTTTAGGTaGTCAAATTGTTTTAGAAGAGCTTGGTGGTCCATGCCTATATCT +
Preference number: 5 (lower is better)
Translates to: SKSVDSNLSGFRWFR*SNCFRRAWWSMPIS
Trigger: AGATATAGGCATGGACCACCAAGCTCTTCTAAAACAATTTGATCACCTAAACCACCTGAATCCTGACAAGTTTGAATCCACAGATTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323688.10
ENST00000458064.6
ENST00000529010.6
ENST00000529313.5
ENST00000530527.5
ENST00000533773.5
ENST00000622082.4
ENST00000646648.1
CDS-3UTR CAA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATCAGTTCATCAAGTTTaGTCCTCACATGGTGACTTA +
Preference number: 5 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRSVHQV*SSHGDL
Trigger: TAAGTCACCATGTGAGGACAAAACTTGATGAACTGA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTCTGTGGATTCAAACTaGTCAGGATTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFSVDSN*SGFRWF
Trigger: AAACCACCTGAATCCTGACAAGTTTGAATCCACAGA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGAGTCACCAATCTGTCTTaGTTAGTATCAACCTCATTC +
Preference number: 5 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRVTNLS*LVSTSF
Trigger: GAATGAGGTTGATACTAACAAAGACAGATTGGTGAC...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527735.1
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGACAGCACATCAATCACTaGCTTGAGATATTCATCATA +
Preference number: 5 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRQHINH*LEIFII
Trigger: TATGATGAATATCTCAAGCAAGTGATTGATGTGCTG...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTCAGTTCATCAAGTTTaGTCCTCACATGGTGACTTA +
Preference number: 5 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFSVHQV*SSHGDL
Trigger: TAAGTCACCATGTGAGGACAAAACTTGATGAACTGA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp AGGGCTTCTAATTCTTGTTCATCCAGGAATCCATCACTATTGACATCATGTAATTCAGTTCATCAAGTTTaGTCCTCACATGGTGACTTA +
Preference number: 5 (lower is better)
Translates to: RASNSCSSRNPSLLTSCNSVHQV*SSHGDL
Trigger: TAAGTCACCATGTGAGGACAAAACTTGATGAACTGA...ATTACATGATGTCAATAGTGATGGATTCCTGGATGAACAAGAATTAGAAGCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp GATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCAGATCACTTGTTGCCGCTTaGATTAGCATATCTAAATCT +
Preference number: 5 (lower is better)
Translates to: DEIDVELTAFFQVLVDFRSLVAA*ISISKS
Trigger: AGATTTAGATATGCTAATCAAAGCGGCAACAAGTGA...TCTGAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGTCACCAATCTGTCTTaGTTAGTATCAACCTCATTC +
Preference number: 5 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFVTNLS*LVSTSF
Trigger: GAATGAGGTTGATACTAACAAAGACAGATTGGTGAC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527735.1
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS TCA 90 bp TGTTTAATAGCTAAAGAAGATTTCATTGCTTACAGCCAAGAATCTTaGCCTATACAGAATTTGGCAGCTAGAAGTAAAGCACAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: CLIAKEDFIAYSQES*PIQNLAARSKAQQV
Trigger: GACTTGCTGTGCTTTACTTCTAGCTGCCAAATTCTGTATAGGTCAAGATTCTTGGCTGTAAGCAATGAAATCTTCTTTAGCTATTAAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CCA 90 bp AGAATTGCTCTTTGTCTACCATATAAATTGACCAAGTCCCAAATCTaGAGCCCTGAAGAATTGAAAACTGTACTCCAAACTGAAACATTT +
Preference number: 5 (lower is better)
Translates to: RIALCLPYKLTKSQI*SPEELKTVLQTETF
Trigger: AAATGTTTCAGTTTGGAGTACAGTTTTCAATTCTTCAGGGCTCCAGATTTGGGACTTGGTCAATTTATATGGTAGACAAAGAGCAATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS-3UTR CAA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCCAGCACATCAATCACTaGCTTGAGATATTCATCATA +
Preference number: 5 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFQHINH*LEIFII
Trigger: TATGATGAATATCTCAAGCAAGTGATTGATGTGCTG...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCTCACTTGTTGCCGCTTaGATTAGCATATCTAAATCT +
Preference number: 5 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFSLVAA*ISISKS
Trigger: AGATTTAGATATGCTAATCAAAGCGGCAACAAGTGA...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458064.6
ENST00000529010.6
ENST00000533773.5
ENST00000622082.4
CDS-3UTR CAA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGGTCACCAATCTGTCTTaGTTAGTATCAACCTCATTC +
Preference number: 5 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRVTNLS*LVSTSF
Trigger: GAATGAGGTTGATACTAACAAAGACAGATTGGTGAC...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp AAAGATGAAATAGATGTTGAGTTAACAGCTTTCTTCCAAGTTCTGGTGGACTTCGTGGCCTTTCCAGAATaGTTAATATCAAACAGACAT +
Preference number: 5 (lower is better)
Translates to: KDEIDVELTAFFQVLVDFVAFPE*LISNRH
Trigger: ATGTCTGTTTGATATTAACAATTCTGGAAAGGCCAC...GAAGTCCACCAGAACTTGGAAGAAAGCTGTTAACTCAACATCTATTTCATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529010.6
CDS-3UTR CAA 90 bp AGGGCTTCTAATTCTTGTTCATCCAGGAATCCATCACTATTGACATCATGTAATGCATCCAACTTGCTGTaGGAATATCACATACAATTT +
Preference number: 5 (lower is better)
Translates to: RASNSCSSRNPSLLTSCNASNLL*EYHIQF
Trigger: AAATTGTATGTGATATTCCAACAGCAAGTTGGATGC...ATTACATGATGTCAATAGTGATGGATTCCTGGATGAACAAGAATTAGAAGCCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS-3UTR CAA 90 bp TATACTTTCTCCAACTCTTTAGTAAATAGGGCTTCTAATTCTTGTTCATCCAGGCACATTGCATCCAACTaGCTGTTGGAATATCACATA +
Preference number: 5 (lower is better)
Translates to: YTFSNSLVNRASNSCSSRHIASN*LLEYHI
Trigger: TATGTGATATTCCAACAGCAAGTTGGATGCAATGTG...CCTGGATGAACAAGAATTAGAAGCCCTATTTACTAAAGAGTTGGAGAAAGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS CCA 90 bp CATTTAGTTATAATTCCTCCCATTTCACTTCATTTCACTTACTGGTaGTTCTATCTTCGCACTTTCCACAGGGTGAATATTTTGTACTTT +
Preference number: 5 (lower is better)
Translates to: HLVIIPPISLHFTYW*FYLRTFHRVNILYF
Trigger: AAAGTACAAAATATTCACCCTGTGGAAAGTGCGAAGATAGAACCACCAGTAAGTGAAATGAAGTGAAATGGGAGGAATTATAACTAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533511.6
CDS CCA 90 bp TTTCATTTAGTTATAATTCCTCCCATTTCACTTCATTTCACTTACTaGTGGTTCTATCTTCGCACTTTCCACAGGGTGAATATTTTGTAC +
Preference number: 5 (lower is better)
Translates to: FHLVIIPPISLHFTY*WFYLRTFHRVNILY
Trigger: GTACAAAATATTCACCCTGTGGAAAGTGCGAAGATAGAACCACCAGTAAGTGAAATGAAGTGAAATGGGAGGAATTATAACTAAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533511.6
CDS CAA 90 bp GGCCTTACCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTGCTaGCGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCCCACCGC +
Preference number: 6 (lower is better)
Translates to: GLTWPGLGERGCAWC*RPAHKPVLQPPAHR
Trigger: GCGGTGGGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGGTAAGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531172.5
ENST00000533511.6
CDS CAA 90 bp CTTCGTCTCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTGCTaGCGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCCCACCGC +
Preference number: 6 (lower is better)
Translates to: LRLWPGLGERGCAWC*RPAHKPVLQPPAHR
Trigger: GCGGTGGGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAGACGAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525637.1
CDS CAA 90 bp AACACGTTCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTGCTaGCGTCCAGCGCACAAACCTGTCCTCCAGCCCCCGGCCCACCGC +
Preference number: 6 (lower is better)
Translates to: NTFWPGLGERGCAWC*RPAHKPVLQPPAHR
Trigger: GCGGTGGGCCGGGGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAACGTGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323688.10
ENST00000529010.6
ENST00000533738.6
CDS GCA 72 bp CTCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTaGTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: LWPGLGERGCAW*LRPAHKPVLQP
Trigger: GGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525637.1
CDS GCA 72 bp ACCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTaGTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: TWPGLGERGCAW*LRPAHKPVLQP
Trigger: GGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531172.5
ENST00000533511.6
CDS GCA 72 bp TTCTGGCCGGGTCTCGGCGAGCGAGGCTGCGCCTGGTaGTTGCGTCCAGCGCACAAACCTGTCCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: FWPGLGERGCAW*LRPAHKPVLQP
Trigger: GGGCTGGAGGACAGGTTTGTGCGCTGGACGCAAGCACCAGGCGCAGCCTCGCTCGCCGAGACCCGGCCAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323688.10
ENST00000529010.6
ENST00000533738.6
CDS GCA 72 bp CCCTCCTCGACCCCGAAGAAAGCTCGGGTGCCCAGCTaGGAGTGGAGCAGAGGGAACCCAGCGCCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: PSSTPKKARVPS*EWSRGNPAPPA
Trigger: AGCCGGAGGCGCTGGGTTCCCTCTGCTCCACTCGCAGCTGGGCACCCGAGCTTTCTTCGGGGTCGAGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529313.5
CDS GCA 72 bp GCCAGCCACCCTCCTCGACCCCGAAGAAAGCTCGGGTaGCCAGCTGCGAGTGGAGCAGAGGGAACCCAGCGC +
Preference number: 6 (lower is better)
Translates to: ASHPPRPRRKLG*PAASGAEGTQR
Trigger: GCGCTGGGTTCCCTCTGCTCCACTCGCAGCTGGGCACCCGAGCTTTCTTCGGGGTCGAGGAGGGTGGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529313.5
CDS CCA 72 bp GTAATCTCGGCGCCGCCAGGGGCCAAGACACAAATCTaGGAACCTCAGCCTAGATGGAGGAGGGTGCGGGGT +
Preference number: 6 (lower is better)
Translates to: VISAPPGAKTQI*EPQPRWRRVRG
Trigger: ACCCCGCACCCTCCTCCATCTAGGCTGAGGTTCCCAGATTTGTGTCTTGGCCCCTGGCGGCGCCGAGATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528644.5
CDS TCA 72 bp TACTCAGGAGGCGGAGGCAGAGGCGGGAGGATCACTTaGGCTCAGAAGGCCGAGGCTGCAGTGAACCATGAT +
Preference number: 6 (lower is better)
Translates to: YSGGGGRGGRIT*AQKAEAAVNHD
Trigger: ATCATGGTTCACTGCAGCCTCGGCCTTCTGAGCTCAAGTGATCCTCCCGCCTCTGCCTCCGCCTCCTGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530527.5
ENST00000620945.1
CDS TCA 72 bp GGAGGATCACTTGAGCTCAGAAGGCCGAGGCTGCAGTaGACCATGATCATTGTGCCACAGAGTGAGACCCTG +
Preference number: 6 (lower is better)
Translates to: GGSLELRRPRLQ*TMIIVPQSETL
Trigger: CAGGGTCTCACTCTGTGGCACAATGATCATGGTTCACTGCAGCCTCGGCCTTCTGAGCTCAAGTGATCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530527.5
CDS TCA 72 bp GGAGGATCACTTGAGCTCAGAAGGCCGAGGCTGCAGTaGACCATGATCATTGTGCCACAGAGTGAGACCCTT +
Preference number: 6 (lower is better)
Translates to: GGSLELRRPRLQ*TMIIVPQSETL
Trigger: AAGGGTCTCACTCTGTGGCACAATGATCATGGTTCACTGCAGCCTCGGCCTTCTGAGCTCAAGTGATCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620945.1
CDS GCA 72 bp CTTGCCAACAGAAGTCAAGGTGAGGTTGAGACTTCCTaGCACAGAGACGAAGGTGGTAGAACTTCAGAGTGC +
Preference number: 6 (lower is better)
Translates to: LANRSQGEVETS*HRDEGGRTSEC
Trigger: GCACTCTGAAGTTCTACCACCTTCGTCTCTGTGGCAGGAAGTCTCAACCTCACCTTGACTTCTGTTGGCAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CAA 90 bp AATGGCCTCAGGGAAGCTAACTCAAGCAGAGAAAGTCCAGTTTTCTaGCCTTCCCCACTGCCTCCAGGAGCAAACTTGAACAGTGAGAGT +
Preference number: 6 (lower is better)
Translates to: NGLREANSSRESPVF*PSPLPPGANLNSES
Trigger: ACTCTCACTGTTCAAGTTTGCTCCTGGAGGCAGTGGGGAAGGCAAGAAAACTGGACTTTCTCTGCTTGAGTTAGCTTCCCTGAGGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS TCA 72 bp GAGGCTGCAGTGAACCATGATCATTGTGCCACAGAGTaGGACCCTGTCTTGGAAATCCTGTCTGATTACTGC +
Preference number: 6 (lower is better)
Translates to: EAAVNHDHCATE*DPVLEILSDYC
Trigger: GCAGTAATCAGACAGGATTTCCAAGACAGGGTCTCACTCTGTGGCACAATGATCATGGTTCACTGCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530527.5
CDS TCA 72 bp GAGGCTGCAGTGAACCATGATCATTGTGCCACAGAGTaGGACCCTTGGAAATCCTGTCTGATTACTGCTACC +
Preference number: 6 (lower is better)
Translates to: EAAVNHDHCATE*DPWKSCLITAT
Trigger: GGTAGCAGTAATCAGACAGGATTTCCAAGGGTCTCACTCTGTGGCACAATGATCATGGTTCACTGCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620945.1
CDS GCA 72 bp GTGACCCAGTTCTGGTCGAAACATAAGTTCAGGTGCTaGTGGTTCTGGAAAATGGCCTCAGGGAAGCTAACT +
Preference number: 6 (lower is better)
Translates to: VTQFWSKHKFRC*WFWKMASGKLT
Trigger: AGTTAGCTTCCCTGAGGCCATTTTCCAGAACCAGCAGCACCTGAACTTATGTTTCGACCAGAACTGGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS GCA 72 bp AGTGTGACCCAGTTCTGGTCGAAACATAAGTTCAGGTaGTGCTGGTTCTGGAAAATGGCCTCAGGGAAGCTA +
Preference number: 6 (lower is better)
Translates to: SVTQFWSKHKFR*CWFWKMASGKL
Trigger: TAGCTTCCCTGAGGCCATTTTCCAGAACCAGCAGCACCTGAACTTATGTTTCGACCAGAACTGGGTCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CCA 72 bp AAATCTGGGGTTGGCTTAGTTGAGGAGGTAGGGCTTTaGGCAGTGAGACTTCTTGCCAACAGAAGTCAAGGT +
Preference number: 6 (lower is better)
Translates to: KSGVGLVEEVGL*AVRLLANRSQG
Trigger: ACCTTGACTTCTGTTGGCAAGAAGTCTCACTGCCCAAAGCCCTACCTCCTCAACTAAGCCAACCCCAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CCA 72 bp TGTATCTATTTTTGCTGGCATAAAGCATGGCAGAGGTaGTGTGGCTCTGGAACTGGCAACTGTTCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: CIYFCWHKAWQR*CGSGTGNCSAG
Trigger: GCCTGCTGAACAGTTGCCAGTTCCAGAGCCACACCACCTCTGCCATGCTTTATGCCAGCAAAAATAGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CAA 90 bp TGGCAACTGTTCAGCAGGCAGCTTCCTAATCCAGCAGGCAGCTTCTaGATTGTTCTAAAAGCAGCAGCTCTTTCAGCAGCCTACTCTTGT +
Preference number: 6 (lower is better)
Translates to: WQLFSRQLPNPAGSF*IVLKAAALSAAYSC
Trigger: ACAAGAGTAGGCTGCTGAAAGAGCTGCTGCTTTTAGAACAATCAAGAAGCTGCCTGCTGGATTAGGAAGCTGCCTGCTGAACAGTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS TCA 72 bp TGCCACAGAGTGAGACCCTGTCTTGGAAATCCTGTCTaGTTACTGCTACCTCTGCCTTCATGTTGTCTCTTG +
Preference number: 6 (lower is better)
Translates to: CHRVRPCLGNPV*LLLPLPSCCLL
Trigger: CAAGAGACAACATGAAGGCAGAGGTAGCAGTAATCAGACAGGATTTCCAAGACAGGGTCTCACTCTGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530527.5
CDS CCA 72 bp TTCTGGTCGAAACATAAGTTCAGGTGCTGCTGGTTCTaGAAAATGGCCTCAGGGAAGCTAACTCAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: FWSKHKFRCCWF*KMASGKLTQAE
Trigger: CTCTGCTTGAGTTAGCTTCCCTGAGGCCATTTTCCAGAACCAGCAGCACCTGAACTTATGTTTCGACCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CCA 72 bp CTCTCAGGGCAGAAAACTTGTCTTTCAGTTTGTAGGTaGCCAGAACACAAGGAGCCACACCCTAACATGATG +
Preference number: 6 (lower is better)
Translates to: LSGQKTCLSVCR*PEHKEPHPNMM
Trigger: CATCATGTTAGGGTGTGGCTCCTTGTGTTCTGGCCACCTACAAACTGAAAGACAAGTTTTCTGCCCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CCA 72 bp ACGAAGGTGGTAGAACTTCAGAGTGCTAGCATGTGTTaGCTGCTTCTTGCCTCTTTTCAGCAAAGCCCTACA +
Preference number: 6 (lower is better)
Translates to: TKVVELQSASMC*LLLASFQQSPT
Trigger: TGTAGGGCTTTGCTGAAAAGAGGCAAGAAGCAGCCAACACATGCTAGCACTCTGAAGTTCTACCACCTTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS TCA 72 bp ATTGTGCCACAGAGTGAGACCCTTGGAAATCCTGTCTaGTTACTGCTACCTCTGCCTTCATGTTGTCTCTTG +
Preference number: 6 (lower is better)
Translates to: IVPQSETLGNPV*LLLPLPSCCLL
Trigger: CAAGAGACAACATGAAGGCAGAGGTAGCAGTAATCAGACAGGATTTCCAAGGGTCTCACTCTGTGGCACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620945.1
CDS TCA 72 bp TTTCCTTTGGCTCAGCTGAGAAACTCAAAATGTGTTTaGCCTGCATTCCTGTGTTTTGAGAGGCCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: FPLAQLRNSKCV*PAFLCFERPRQ
Trigger: CTGCCTTGGCCTCTCAAAACACAGGAATGCAGGTCAAACACATTTTGAGTTTCTCAGCTGAGCCAAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530527.5
CDS CCA 72 bp GTCTTTCATCTAGTATGCAATAATGGGCTGGATTTCTaGTGGTTTCTCTTCAGGGAGAGAGGGGTGAGTGTT +
Preference number: 6 (lower is better)
Translates to: VFHLVCNNGLDF*WFLFRERGVSV
Trigger: AACACTCACCCCTCTCTCCCTGAAGAGAAACCACCAGAAATCCAGCCCATTATTGCATACTAGATGAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS GCA 72 bp CATCAGTCTCTTCCCATACCTCTTTTAGTTGATCTTTaGTTCCCTGTGAACTGGGTGATTAACTTTAGGGTG +
Preference number: 6 (lower is better)
Translates to: HQSLPIPLLVDL*FPVNWVINFRV
Trigger: CACCCTAAAGTTAATCACCCAGTTCACAGGGAAGCAAAGATCAACTAAAAGAGGTATGGGAAGAGACTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646648.1
CDS CCA 72 bp TTCATGGTTGAGACTTTTACTCAGAGCCAAGTAACGTaGGGACAGAGGCAGGAAGAGATGTATCTATTTTTG +
Preference number: 6 (lower is better)
Translates to: FMVETFTQSQVT*GQRQEEMYLFL
Trigger: CAAAAATAGATACATCTCTTCCTGCCTCTGTCCCCACGTTACTTGGCTCTGAGTAAAAGTCTCAACCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS TCA 72 bp GTGGATTCAAACTTGTCAGGATTCAGGTGGTTTAGGTaGTCAAATTGTTTTAGAAGAGCTTGGTGGTCCATG +
Preference number: 6 (lower is better)
Translates to: VDSNLSGFRWFR*SNCFRRAWWSM
Trigger: CATGGACCACCAAGCTCTTCTAAAACAATTTGATCACCTAAACCACCTGAATCCTGACAAGTTTGAATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323688.10
ENST00000458064.6
ENST00000529010.6
ENST00000529313.5
ENST00000530527.5
ENST00000533773.5
ENST00000622082.4
ENST00000646648.1
CDS TCA 72 bp TCAAGGGACATTGTACAACATAATAGTCTGTCCTCTTaGTTGTTTCAGATGGAAGGAGACTCCCAGCTATCT +
Preference number: 6 (lower is better)
Translates to: SRDIVQHNSLSS*LFQMEGDSQLS
Trigger: AGATAGCTGGGAGTCTCCTTCCATCTGAAACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS CCA 72 bp GAAGAAGGTACACAGAATTTAGGTAGCCAACAAGGCTaGCTGAGTTTAAAATCCAAAGTTGCCTACCAAACA +
Preference number: 6 (lower is better)
Translates to: EEGTQNLGSQQG*LSLKSKVAYQT
Trigger: TGTTTGGTAGGCAACTTTGGATTTTAAACTCAGCCAGCCTTGTTGGCTACCTAAATTCTGTGTACCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CAA 72 bp GGTAAAGGAATTCCTCTCAGAAAGGTGAATCAGGGGTaGCCTGATAGGCAAACCAAGGAATATATTCATGAA +
Preference number: 6 (lower is better)
Translates to: GKGIPLRKVNQG*PDRQTKEYIHE
Trigger: TTCATGAATATATTCCTTGGTTTGCCTATCAGGCAACCCCTGATTCACCTTTCTGAGAGGAATTCCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CAA 72 bp TTTGCTGAGAGAATTGCTCTTTGTCTACCATATAAATaGACCAAGTCCCAAATCTGGAGCCCTGAAGAATTG +
Preference number: 6 (lower is better)
Translates to: FAERIALCLPYK*TKSQIWSPEEL
Trigger: CAATTCTTCAGGGCTCCAGATTTGGGACTTGGTCAATTTATATGGTAGACAAAGAGCAATTCTCTCAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CAA 72 bp TGCTGTAAAAATTGTATCTTCCCACTCACTGCAATCTaGGGTTGCAGTCCTGAGATGAGATTAACACATGAT +
Preference number: 6 (lower is better)
Translates to: CCKNCIFPLTAI*GCSPEMRLTHD
Trigger: ATCATGTGTTAATCTCATCTCAGGACTGCAACCCAAGATTGCAGTGAGTGGGAAGATACAATTTTTACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530527.5
ENST00000646648.1
CDS CAA 90 bp CTAATAGGATACACTGAGCATCTCTTCTGTGGTATTCAAGGGACATaGTACAACATAATAGTCTGTCCTCTTGATTGTTTCAGATGGAAG +
Preference number: 6 (lower is better)
Translates to: LIGYTEHLFCGIQGT*YNIIVCPLDCFRWK
Trigger: CTTCCATCTGAAACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAAGAGATGCTCAGTGTATCCTATTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS CCA 72 bp CTTTGTCTACCATATAAATTGACCAAGTCCCAAATCTaGAGCCCTGAAGAATTGAAAACTGTACTCCAAACT +
Preference number: 6 (lower is better)
Translates to: LCLPYKLTKSQI*SPEELKTVLQT
Trigger: AGTTTGGAGTACAGTTTTCAATTCTTCAGGGCTCCAGATTTGGGACTTGGTCAATTTATATGGTAGACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CAA 72 bp TACACTGAGCATCTCTTCTGTGGTATTCAAGGGACATaGTACAACATAATAGTCTGTCCTCTTGATTGTTTC +
Preference number: 6 (lower is better)
Translates to: YTEHLFCGIQGT*YNIIVCPLDCF
Trigger: GAAACAATCAAGAGGACAGACTATTATGTTGTACAATGTCCCTTGAATACCACAGAAGAGATGCTCAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533773.5
CDS CAA 90 bp GAGCTTTTCTCTGAAGTGTTTATCTGTTTCCAGCACATCAATCACTaGCTTGAGATATTCATCATAATAAAGTCCAGTATCTGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: ELFSEVFICFQHINH*LEIFIIIKSSIWWF
Trigger: GAACCACCAGATACTGGACTTTATTATGATGAATATCTCAAGCAAGTGATTGATGTGCTGGAAACAGATAAACACTTCAGAGAAAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323688.10
ENST00000458064.6
ENST00000529010.6
ENST00000529313.5
ENST00000530527.5
ENST00000533773.5
ENST00000533926.5
ENST00000622082.4
ENST00000646648.1
CDS CAA 90 bp CTACCATATAAATTGACCAAGTCCCAAATCTGGAGCCCTGAAGAATaGAAAACTGTACTCCAAACTGAAACATTTATAAGTAAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: LPYKLTKSQIWSPEE*KTVLQTETFISKGS
Trigger: AGAGCCTTTACTTATAAATGTTTCAGTTTGGAGTACAGTTTTCAATTCTTCAGGGCTCCAGATTTGGGACTTGGTCAATTTATATGGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS CAA 90 bp AAAAATAGCTTTGCTGAGAGAATTGCTCTTTGTCTACCATATAAATaGACCAAGTCCCAAATCTGGAGCCCTGAAGAATTGAAAACTGTA +
Preference number: 6 (lower is better)
Translates to: KNSFAERIALCLPYK*TKSQIWSPEELKTV
Trigger: TACAGTTTTCAATTCTTCAGGGCTCCAGATTTGGGACTTGGTCAATTTATATGGTAGACAAAGAGCAATTCTCTCAGCAAAGCTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532240.2
CDS TCA 72 bp AGTGTTTATCTGTTTCCAGCACATCAATCACTTGCTTaGGATATTCATCATAATAAAGTCCAGTATCTGGTG +
Preference number: 6 (lower is better)
Translates to: SVYLFPAHQSLA*DIHHNKVQYLV
Trigger: CACCAGATACTGGACTTTATTATGATGAATATCTCAAGCAAGTGATTGATGTGCTGGAAACAGATAAACACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323688.10
ENST00000458064.6
ENST00000529010.6
ENST00000529313.5
ENST00000530527.5
ENST00000533773.5
ENST00000533926.5
ENST00000622082.4
ENST00000646648.1
CDS CAA 72 bp TCTGAAGTGTTTATCTGTTTCCAGCACATCAATCACTaGCTTGAGATATTCATCATAATAAAGTCCAGTATC +
Preference number: 6 (lower is better)
Translates to: SEVFICFQHINH*LEIFIIIKSSI
Trigger: GATACTGGACTTTATTATGATGAATATCTCAAGCAAGTGATTGATGTGCTGGAAACAGATAAACACTTCAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323688.10
ENST00000458064.6
ENST00000529010.6
ENST00000529313.5
ENST00000530527.5
ENST00000533773.5
ENST00000533926.5
ENST00000622082.4
ENST00000646648.1