RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000095906

Ensembl transcript IDs: ENST00000262302.14, ENST00000563136.5, ENST00000563821.1, ENST00000564227.5, ENST00000565134.5, ENST00000565603.5, ENST00000565987.5, ENST00000566090.5, ENST00000566447.5, ENST00000567700.5, ENST00000568287.5, ENST00000568610.2, ENST00000568706.1, ENST00000568834.5, ENST00000569898.5

Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTCCCGGTCCAGGAAGACGGGTGCCCAGCCGCGGTCGCACTGGTaGACAGCCCTGCCCTGCGCCCCGAGCATGCGGGGGATACTGGGG +
Preference number: 1 (lower is better)
Translates to: CSRSRKTGAQPRSHW*TALPCAPSMRGILG
Trigger: CCCCAGTATCCCCCGCATGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR CCA 90 bp CTCTGCTCCCGGTCCAGGAAGACGGGTGCCCAGCCGCGGTCGCACTaGTGCACAGCCCTGCCCTGCGCCCCGAGCATGCGGGGGATACTG +
Preference number: 1 (lower is better)
Translates to: LCSRSRKTGAQPRSH*CTALPCAPSMRGIL
Trigger: CAGTATCCCCCGCATGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAGCAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR GCA 90 bp TGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTaGAGGGCCCGGGAACCGAGCCCAGGCCTCTGTTTCTCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: WSGRSSPADAAWACP*RAREPSPGLCFSER
Trigger: CCTCTCAGAGAAACAGAGGCCTGGGCTCGGTTCCCGGGCCCTGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR GCA 90 bp CACAGACATGAGCGAGATGCTCTGCTCCCGGTCCAGGAAGACGGGTaGCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCC +
Preference number: 1 (lower is better)
Translates to: HRHERDALLPVQEDG*PAAVALVHSPALRP
Trigger: GGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCATGTCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR CCA 90 bp AGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGATGAAGTCGTaGCCCTCCTCCAGGGTCCTCATGAGCGCAGGGTCCAGGGGCACG +
Preference number: 1 (lower is better)
Translates to: SAAKAGLPGNSWMKS*PSSRVLMSAGSRGT
Trigger: CGTGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR GCA 90 bp TCCGGCTTCTCCAGCAGGAAGCCCACAGACATGAGCGAGATGCTCTaGTCCCGGTCCAGGAAGACGGGTGCCCAGCCGCGGTCGCACTGG +
Preference number: 1 (lower is better)
Translates to: SGFSSRKPTDMSEML*SRSRKTGAQPRSHW
Trigger: CCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCATGTCTGTGGGCTTCCTGCTGGAGAAGCCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR CCA 90 bp GGCCTTAGTCAGGGGAGGCACGCGGGCGTCGCGTCCAGAATCTTCTaGGCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAAC +
Preference number: 1 (lower is better)
Translates to: GLSQGRHAGVASRIF*AMEVSAAKAGLPGN
Trigger: GTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCGACGCCCGCGTGCCTCCCCTGACTAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR TCA 90 bp ACACCACGGCCTCGTCCGGCTTCTCCAGCAGGAAGCCCACAGACATaGGCGAGATGCTCTGCTCCCGGTCCAGGAAGACGGGTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: TPRPRPASPAGSPQT*ARCSAPGPGRRVPS
Trigger: GCTGGGCACCCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCATGTCTGTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR CCA 90 bp GCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTaGATGAAGTCGTGGCCCTCCTCCAGGGTCCTCATGAGCGCAGGG +
Preference number: 1 (lower is better)
Translates to: AMEVSAAKAGLPGNS*MKSWPSSRVLMSAG
Trigger: CCCTGCGCTCATGAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR CCA 90 bp ACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCATGCGGGGGATACTaGGGCCACACAGGTCCACATCCAGGATTCCCACCTTCTTGCCTG +
Preference number: 1 (lower is better)
Translates to: TGAQPCPAPRACGGY*GHTGPHPGFPPSCL
Trigger: CAGGCAAGAAGGTGGGAATCCTGGATGTGGACCTGTGTGGCCCCAGTATCCCCCGCATGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR GCA 90 bp GCACGCGGGCGTCGCGTCCAGAATCTTCTGGGCTATGGAGGTGAGTaGAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGATGAAGTCGTG +
Preference number: 1 (lower is better)
Translates to: ARGRRVQNLLGYGGE*SEGGAPRELLDEVV
Trigger: CACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCGACGCCCGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR GCA 90 bp ACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCCGCTCTTGCCCGGGCTaGGGTGCAGTTGCAACCGCG +
Preference number: 2 (lower is better)
Translates to: TGAQPRSHWCTALPCAPSRSCPG*GAVATA
Trigger: CGCGGTTGCAACTGCACCGCAGCCCGGGCAAGAGCG...GCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR CCA 90 bp GGCACGGAGCCTAAGAAGGGCACCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGCCCACGGACACCGCCTaGGGCGTGGTGACCACGAGG +
Preference number: 2 (lower is better)
Translates to: GTEPKKGTPASWASSSPPPTDTA*GVVTTR
Trigger: CCTCGTGGTCACCACGCCCCAGGCGGTGTCCGTGGG...CGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAGGCTCCGTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR-3UTR GCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGGACAGCGACCCAGGGTaGTGGAGGCCCGGGGTCACC +
Preference number: 2 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRDSDPG*WRPGVT
Trigger: GGTGACCCCGGGCCTCCAGCACCCTGGGTCGCTGTC...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
3UTR-3UTR GCA 90 bp ACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCTCCCACCTTCTTGCCTaGATGGCGCAGTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TGAQPRSHWCTALPCAPSSHLLA*MAQCQG
Trigger: GCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGGGA...GCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR GCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGCCCCCGTCTCACAGCTaGAGAGCACGCAGACCACGG +
Preference number: 2 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRPPSHS*RARRPR
Trigger: CCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGG...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR-3UTR CCA 90 bp CTGGGGCTGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCAGCCCTTGGTGGCCCTaGAAAGCGGCTGCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: LGLGWSGRSSPADAAWACSPWWP*KAAARW
Trigger: CCACCTTGCAGCCGCTTTCCAGGGCCACCAAGGGCT...GCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCAGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR-3UTR CCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCGACACATCCTGGGGCTaGGCTGGTCGGGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCDTSWG*AGRGEA
Trigger: AGCTTCTCCCCGACCAGCCCAGCCCCAGGATGTGTC...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR-3UTR TCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGAGGCCTCTGTTTCTCTaGGAGGCTGGAGCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRRPLFL*EAGAEP
Trigger: GGGCTCTGCTCCAGCCTCTCAGAGAAACAGAGGCCT...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR-3UTR TCA 90 bp GAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGATGAAGTCGTGGCCCTCCCTCCAGGGTCCTCATaGGCGCAGGGTCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: ECSEGGAPRELLDEVVALPPGSS*AQGPGA
Trigger: TGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGG...GAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR-3UTR GCA 90 bp GCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGCCCCCGTCTCACAGCTaGAGAGCACGCAGACCACGG +
Preference number: 2 (lower is better)
Translates to: AEVPRSANCVDTRLPGAQPPSHS*RARRPR
Trigger: CCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGG...CTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
3UTR-3UTR CCA 90 bp AGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGAGCCCTTGGTGGCCCTaGAAAGCGGCTGCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: RAQAAPVSQLQSTQTTALSPWWP*KAAARW
Trigger: CCACCTTGCAGCCGCTTTCCAGGGCCACCAAGGGCT...CAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR-3UTR CCA 90 bp GCTCCCGGTCCAGGAAGACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCCCAGGGCCAGCTCCGTaGAGATGGTGCTTTTCCCAA +
Preference number: 2 (lower is better)
Translates to: APGPGRRVPSRGRTGAQPPGPAP*RWCFSQ
Trigger: TTGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGG...GGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR GCA 90 bp GAAGGCGGGGCTCCCAGGGAACTCCTGGATGAAGTCGTGGCCCTCCTCCAGGGTGGGTCACCTGAGGACTaGAGAAGTCCCGCGCTCCGC +
Preference number: 2 (lower is better)
Translates to: EGGAPRELLDEVVALLQGGSPED*RSPALR
Trigger: GCGGAGCGCGGGACTTCTGCAGTCCTCAGGTGACCC...ACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR GCA 90 bp AGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGTCTATGGTGGCCATGTaGTCATCGGAGGTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: RAQAAPVSQLQSTQTTALSMVAM*SSEVPG
Trigger: CCCGGGGACCTCCGATGAGCACATGGCCACCATAGA...CAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR CCA 90 bp GCTCCCAGGGAACTCCTGGATGAAGTCGTGGCCCTCCTCCAGGGTCCTCATGAGCCCACGGACACCGCCTaGGGCGTGGTGACCACGAGG +
Preference number: 2 (lower is better)
Translates to: APRELLDEVVALLQGPHEPTDTA*GVVTTR
Trigger: CCTCGTGGTCACCACGCCCCAGGCGGTGTCCGTGGG...CTCATGAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR-3UTR CCA 90 bp CTTGGGGCCTCTCCACACCACGGCCTCGTCCGGCTTCTCCAGCAGGAAGCCCACACCTTCTTGCCTGCATaGCGCAGTGCCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LGASPHHGLVRLLQQEAHTFLPA*RSARAS
Trigger: GCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGT...GTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR TCA 90 bp CAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGAGGCCTCTGTTTCTCTaGGAGGCTGGAGCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: QKSRAPLTVWTRGCQGHRRPLFL*EAGAEP
Trigger: GGGCTCTGCTCCAGCCTCTCAGAGAAACAGAGGCCT...CCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
3UTR-3UTR GCA 90 bp CGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGTAGGCAACATGCGCAGACCACGGCACTaGAGGCCAACCAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: RSANCVDTRLPGAQVGNMRRPRH*RPTRQS
Trigger: GCTCTGCCTGGTTGGCCTGCAGTGCCGTGGTCTGCG...CATGTTGCCTACCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
3UTR-3UTR GCA 90 bp CGCGTCCAGAATCTTCTGGGCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTCCCCCCCCGTCTCACAGCTaGAGAGCACGCAGACCACGG +
Preference number: 2 (lower is better)
Translates to: RVQNLLGYGGECSEGGAPPPSHS*RARRPR
Trigger: CCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGG...GGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCG
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR CCA 90 bp TCTATGGTGGCCATGTGCTCATCGGAGGTCCCCGGGGGCGTGTCCACCACCAGGAGCCCTTGGTGGCCCTaGAAAGCGGCTGCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: SMVAMCSSEVPGGVSTTRSPWWP*KAAARW
Trigger: CCACCTTGCAGCCGCTTTCCAGGGCCACCAAGGGCT...CCTGGTGGTGGACACGCCCCCGGGGACCTCCGATGAGCACATGGCCACCATAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR CCA 90 bp GAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGTTTCTCTGAGAGGCTaGAGCAGAGCCCTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: ESPGRPRLTAAEHADHGTVSLRG*SRALGG
Trigger: GCCACCAAGGGCTCTGCTCCAGCCTCTCAGAGAAAC...AGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR-3UTR CCA 90 bp AGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGGTTTCTCTGAGAGGCTaGAGCAGAGCCCTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: RAQAAPVSQLQSTQTTALVSLRG*SRALGG
Trigger: GCCACCAAGGGCTCTGCTCCAGCCTCTCAGAGAAAC...CAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR-3UTR CCA 90 bp AAGTCGTGGCCCTCCTCCAGGGTCCTCATGAGCGCAGGGTCCAGGGGCACGGAGGGTAGGCAACATGGATaGGAAGAGAGCCCAGGCCGC +
Preference number: 2 (lower is better)
Translates to: KSWPSSRVLMSAGSRGTEGRQHG*EESPGR
Trigger: GCGGCCTGGGCTCTCTTCCCATCCATGTTGCCTACC...CTCCGTGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGGAGGGCCACGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR TCA 90 bp ATCACCCGCAAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGCCTCACGTCCCCCAGGCCTCTGTTTCTCTaGGAGGCTGGAGCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: ITRKPVFLQKVSSRLTSPRPLFL*EAGAEP
Trigger: GGGCTCTGCTCCAGCCTCTCAGAGAAACAGAGGCCT...GGGGGACGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGCTTGCGGGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR TCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGGTTACAAAACATGCCTaGGGTCAGTTCGCCCCCTTA +
Preference number: 2 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRVTKHA*GQFAPL
Trigger: TAAGGGGGCGAACTGACCTCAGGCATGTTTTGTAAC...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
3UTR-3UTR TCA 90 bp CTCCCGGTCCAGGAAGACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTTCCGTCTTACTTTCATaGCTGCGCGCGTGTGATTTA +
Preference number: 2 (lower is better)
Translates to: LPVQEDGCPAAVALVHSPSVLLS*LRACDL
Trigger: TAAATCACACGCGCGCAGTCATGAAAGTAAGACGGA...AGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR GCA 90 bp GCTCCCAGGGAACTCCTGGATGAAGTCGTGGCCCTCCTCCAGGGTCCTCATGAGTCTATGGTGGCCATGTaGTCATCGGAGGTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: APRELLDEVVALLQGPHESMVAM*SSEVPG
Trigger: CCCGGGGACCTCCGATGAGCACATGGCCACCATAGA...CTCATGAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR-3UTR CCA 90 bp AAGGTGGCCTTAGTCAGGGGAGGCACGCGGGCGTCGCGTCCAGAATCTTCTGGGGCAGGGCTTCTATGGTaGCCATGTGCTCATCGGAGG +
Preference number: 2 (lower is better)
Translates to: KVALVRGGTRASRPESSGAGLLW*PCAHRR
Trigger: CCTCCGATGAGCACATGGCCACCATAGAAGCCCTGC...CCCAGAAGATTCTGGACGCGACGCCCGCGTGCCTCCCCTGACTAAGGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR GCA 90 bp CGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCATCTTACTTTCATGACTaGGCGCGTGTGATTTATTTA +
Preference number: 2 (lower is better)
Translates to: RVPSRGRTGAQPCPAPRASYFHD*ARVIYL
Trigger: TAAATAAATCACACGCGCGCAGTCATGAAAGTAAGA...TGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR TCA 90 bp CCAGGATTCCCACCTTCTTGCCTGCATGGCGCAGTGCCAGGGCCAGCTCCGTGGTCCAGGCTACTTTTCTaGACACTGAGAGCGCCACTT +
Preference number: 2 (lower is better)
Translates to: PGFPPSCLHGAVPGPAPWSRLLF*TLRAPL
Trigger: AAGTGGCGCTCTCAGTGTTCAGAAAAGTAGCCTGGA...CCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGGGAATCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR CCA 90 bp GGTGAAGCCGCTCATATTCTCCACGATTCCCATCACCCGCAAGCCCGTCTTCCTGACACATCCTGGGGCTaGGCTGGTCGGGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: GEAAHILHDSHHPQARLPDTSWG*AGRGEA
Trigger: AGCTTCTCCCCGACCAGCCCAGCCCCAGGATGTGTC...AGGAAGACGGGCTTGCGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR TCA 90 bp TTGGGGCCTCTCCACACCACGGCCTCGTCCGGCTTCTCCAGCAGGAAGCCCACAGAACTTAAAAGCATGTaGGATTCTGGCGTCCGTCTT +
Preference number: 2 (lower is better)
Translates to: LGPLHTTASSGFSSRKPTELKSM*DSGVRL
Trigger: AAGACGGACGCCAGAATCTCACATGCTTTTAAGTTC...TGTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR GCA 90 bp GATACTGGGGCCACACAGGTCCACATCCAGGATTCCCACCTTCTTGCCTGCATGAGGACCAGGATGATGTaGCTGACGCCGGCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: DTGATQVHIQDSHLLACMRTRMM*LTPARF
Trigger: AAACCTGGCCGGCGTCAGGCACATCATCCTGGTCCT...CATGCAGGCAAGAAGGTGGGAATCCTGGATGTGGACCTGTGTGGCCCCAGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR CCA 90 bp GGTGAAGCCGCTCATATTCTCCACGATTCCCATCACCCGCAAGCCCGTCTTCCTGACGCAGGGCTTCTATaGTGGCCATGTGCTCATCGG +
Preference number: 2 (lower is better)
Translates to: GEAAHILHDSHHPQARLPDAGLL*WPCAHR
Trigger: CCGATGAGCACATGGCCACCATAGAAGCCCTGCGTC...AGGAAGACGGGCTTGCGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR-3UTR CCA 90 bp GTGAAGCCGCTCATATTCTCCACGATTCCCATCACCCGCAAGCCCGTCTTCCTAGACGCAGGGCTTCTATaGTGGCCATGTGCTCATCGG +
Preference number: 2 (lower is better)
Translates to: VKPLIFSTIPITRKPVFLDAGLL*WPCAHR
Trigger: CCGATGAGCACATGGCCACCATAGAAGCCCTGCGTC...TAGGAAGACGGGCTTGCGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR CCA 72 bp GGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTaGGCCTGCCCCTGCAGGGCCCGGGAACCGAGCCCA +
Preference number: 3 (lower is better)
Translates to: GWSGRSSPADAA*ACPCRAREPSP
Trigger: TGGGCTCGGTTCCCGGGCCCTGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR CCA 72 bp CGGTCCAGGAAGACGGGTGCCCAGCCGCGGTCGCACTaGTGCACAGCCCTGCCCTGCGCCCCGAGCATGCGG +
Preference number: 3 (lower is better)
Translates to: RSRKTGAQPRSH*CTALPCAPSMR
Trigger: CCGCATGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR CCA 72 bp CCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGCCCCTaGAGAAGACGCTGGTGCACTCCGTGCAGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: PRRAGPAPLRRP*RRRWCTPCSVG
Trigger: GCCCACACTGCACGGAGTGCACCAGCGTCTTCTCCAGGGGCGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR GCA 72 bp GAGCGAGATGCTCTGCTCCCGGTCCAGGAAGACGGGTaGCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: ERDALLPVQEDG*PAAVALVHSPA
Trigger: GGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR-3UTR CAA 90 bp TCCAGGAAGACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCAGGATTCCCACCTTCTaGCCTGCATGGCGCAGTGCC +
Preference number: 3 (lower is better)
Translates to: SRKTGAQPRSHWCTALPCRIPTF*PAWRSA
Trigger: GGCACTGCGCCATGCAGGCAAGAAGGTGGGAATCCT...GCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR CCA 72 bp ACCAGGCAGAGCTGCTGGTGCGACACATCCTGGGGCTaGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTG +
Preference number: 3 (lower is better)
Translates to: TRQSCWCDTSWG*AGRGEALRLTL
Trigger: CAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCAGCCCCAGGATGTGTCGCACCAGCAGCTCTGCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR CCA 72 bp CAGGGGAGGCACGCGGGCGTCGCGTCCAGAATCTTCTaGGCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: QGRHAGVASRIF*AMEVSAAKAGL
Trigger: GAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCGACGCCCGCGTGCCTCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR-3UTR CAA 90 bp CTGCATGGCGCAGTGCCAGGGCCAGCTCCGTGGAGATGGTGCTTTTCCCAACGCGACAGGGTCTCGCTCTaGCCCGGGCTGCGGTGCAGT +
Preference number: 3 (lower is better)
Translates to: LHGAVPGPAPWRWCFSQRDRVSL*PGLRCS
Trigger: ACTGCACCGCAGCCCGGGCAAGAGCGAGACCCTGTC...GCGTTGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR GCA 72 bp TCCAGCAGGAAGCCCACAGACATGAGCGAGATGCTCTaGTCCCGGTCCAGGAAGACGGGTGCCCAGCCGCGG +
Preference number: 3 (lower is better)
Translates to: SSRKPTDMSEML*SRSRKTGAQPR
Trigger: CCGCGGCTGGGCACCCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCATGTCTGTGGGCTTCCTGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR CCA 72 bp AAGGCGGGGCTCCCAGGGAACTCCTGGATGAAGTCGTaGCCCTCCTCCAGGGTCCTCATGAGCGCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: KAGLPGNSWMKS*PSSRVLMSAGS
Trigger: GGACCCTGCGCTCATGAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR GCA 72 bp CCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTaGAGGCCAACCAGGCAGAGCTGCTGGTGCGACACA +
Preference number: 3 (lower is better)
Translates to: PSHSCRARRPRH*RPTRQSCWCDT
Trigger: TGTGTCGCACCAGCAGCTCTGCCTGGTTGGCCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
3UTR CCA 72 bp GTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTaGATGAAGTCGTGGCCCTCCTCCAGGGTCCTCATG +
Preference number: 3 (lower is better)
Translates to: VSAAKAGLPGNS*MKSWPSSRVLM
Trigger: CATGAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
3UTR TCA 72 bp CAGCTCCTCTCCGCCGCCCCGTGCAGTGTGGGCAGGTaGAGCCGCTCATATTCTCCACGATTCCCATCACCC +
Preference number: 3 (lower is better)
Translates to: QLLSAAPCSVGR*SRSYSPRFPSP
Trigger: GGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCACGGGGCGGCGGAGAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569898.5
3UTR TCA 72 bp CCTCGTCCGGCTTCTCCAGCAGGAAGCCCACAGACATaGGCGAGATGCTCTGCTCCCGGTCCAGGAAGACGG +
Preference number: 3 (lower is better)
Translates to: PRPASPAGSPQT*ARCSAPGPGRR
Trigger: CCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCATGTCTGTGGGCTTCCTGCTGGAGAAGCCGGACGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR GCA 72 bp CGTCGCGTCCAGAATCTTCTGGGCTATGGAGGTGAGTaGAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: RRVQNLLGYGGE*SEGGAPRELLD
Trigger: ATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR GCA 72 bp ATCCAGGATTCCCACCTTCTTGCCTGCATGGCGCAGTaGCAGGGCCAGCTCCGTGGAGATGGTGCTTTTCCC +
Preference number: 3 (lower is better)
Translates to: IQDSHLLACMAQ*QGQLRGDGAFP
Trigger: GGGAAAAGCACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGGGAATCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR GCA 72 bp GGCCCACAGGCGCCACCGCGCCCGCCTACAACGCGGTaGTCAACAAAGTTAACTTTAAAAGCTCCCCCAACT +
Preference number: 3 (lower is better)
Translates to: GPQAPPRPPTTR*STKLTLKAPPT
Trigger: AGTTGGGGGAGCTTTTAAAGTTAACTTTGTTGAGCACCGCGTTGTAGGCGGGCGCGGTGGCGCCTGTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR TCA 72 bp AGAAGACGCTGGTGCACTCCGTGCAGTGTGGGCAGGTaGAGCCGCTCATATTCTCCACGATTCCCATCACCC +
Preference number: 3 (lower is better)
Translates to: RRRWCTPCSVGR*SRSYSPRFPSP
Trigger: GGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCACGGAGTGCACCAGCGTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568834.5
3UTR TCA 72 bp ACGCCGGCCAGGTTTCCAGGCTACTTTTCTGAACACTaGGAGCGCCACTTCCACAAAGAACTTAAAAGCATG +
Preference number: 3 (lower is better)
Translates to: TPARFPGYFSEH*ERHFHKELKSM
Trigger: CATGCTTTTAAGTTCTTTGTGGAAGTGGCGCTCTCAGTGTTCAGAAAAGTAGCCTGGAAACCTGGCCGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR GCA 72 bp CATGTGAGATTCTGGCGTCCGTCTTACTTTCATGACTaGGCGCGTGTGATTTATTTAGAGACAGGGTCTCGC +
Preference number: 3 (lower is better)
Translates to: HVRFWRPSYFHD*ARVIYLETGSR
Trigger: GCGAGACCCTGTCTCTAAATAAATCACACGCGCGCAGTCATGAAAGTAAGACGGACGCCAGAATCTCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
3UTR TCA 72 bp AAAGCATGTGAGATTCTGGCGTCCGTCTTACTTTCATaGCTGCGCGCGTGTGATTTATTTAGAGACAGGGTC +
Preference number: 3 (lower is better)
Translates to: KACEILASVLLS*LRACDLFRDRV
Trigger: GACCCTGTCTCTAAATAAATCACACGCGCGCAGTCATGAAAGTAAGACGGACGCCAGAATCTCACATGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp ACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCCCGCGGTCGCACTGGTaGACAGCCCTGCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: TGAQPRSHWCTALPCAPSPRSHW*TALPCA
Trigger: GGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGG...GCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR CCA 90 bp GACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCCCCAAGCGAGGCCCTaGAGCGGCTCCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: DGCPAAVALVHSPALRPEPQARP*SGSAPW
Trigger: CCAGGGTGCGGAGCCGCTCCAGGGCCTCGCTTGGGG...CTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp GACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGGCCTGCATGGCGCAGTaGCAGGGCCAGCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: DGCPAAVALVHSPALRPEACMAQ*QGQLRG
Trigger: TCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGC...CTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp GGCACGGAGCCTAAGAAGGGCACCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGGACAGCGACCCAGGGTaGTGGAGGCCCGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: GTEPKKGTPASWASSSPPDSDPG*WRPGVT
Trigger: GGTGACCCCGGGCCTCCAGCACCCTGGGTCGCTGTC...CGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAGGCTCCGTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR GCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGCCAGGAGCTCGCGGCTaGAGTCCGCTTACGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRPGARG*SPLTPA
Trigger: CGCGGGCGTAAGCGGACTGCAGCCGCGAGCTCCTGG...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR GCA 90 bp GGCACGGAGCCTAAGAAGGGCACCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGGCCTGCATGGCGCAGTaGCAGGGCCAGCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: GTEPKKGTPASWASSSPPACMAQ*QGQLRG
Trigger: TCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGC...CGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAGGCTCCGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp CGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCAACCTTCTTGCCTGCATaGCGCAGTGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RVPSRGRTGAQPCPAPRATFLPA*RSARAS
Trigger: GCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGT...TGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR CCA 90 bp TGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGCACCCACGGACACCGCCTaGGGCGTGGTGACCACGAGG +
Preference number: 4 (lower is better)
Translates to: WAGRGEALRLTLPGPAPAPTDTA*GVVTTR
Trigger: CCTCGTGGTCACCACGCCCCAGGCGGTGTCCGTGGG...TGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp GACGCTGCCTGGGCCTGCCCCTGCAGGGCCCGGGAACCGAGCCCAGGCCTCTGTCCTCTCCGCCGCCCCTaGAGAAGACGCTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: DAAWACPCRAREPSPGLCPLRRP*RRRWCT
Trigger: AGTGCACCAGCGTCTTCTCCAGGGGCGGCGGAGAGG...ACAGAGGCCTGGGCTCGGTTCCCGGGCCCTGCAGGGGCAGGCCCAGGCAGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR TCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGCCTCCAGGGTCCTCATaGGCGCAGGGTCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRPPGSS*AQGPGA
Trigger: TGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGG...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR TCA 90 bp GAGCCTAAGAAGGGCACCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGCCCCGTTCTGGGCTATGGAGGTaGGTGCAGCGAAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: EPKKGTPASWASSSPPPRSGLWR*VQRRRG
Trigger: GCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGA...ACGGGGCGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569898.5
CDS-3UTR GCA 90 bp TGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGCAGCCTGCATGGCGCAGTaGCAGGGCCAGCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: WAGRGEALRLTLPGPAPAACMAQ*QGQLRG
Trigger: TCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGC...TGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCACTGGTGCACAGCCCTaGCCTGCGCCCCGAGCATGC +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCTGAQP*PAPRAC
Trigger: GCATGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGT...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR CCA 90 bp GAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTCAGCCGCGGTCGCACTaGTGCACAGCCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ESPGRPRLTAAEHADHGTQPRSH*CTALPC
Trigger: GCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTG...AGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR TCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGTCTGGGCTATGGAGGTaGGTGCAGCGAAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRSGLWR*VQRRRG
Trigger: GCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGA...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR TCA 90 bp TGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGCATCTGGGCTATGGAGGTaGGTGCAGCGAAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: WAGRGEALRLTLPGPAPASGLWR*VQRRRG
Trigger: GCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGA...TGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp AGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGGCCTGCATGGCGCAGTaGCAGGGCCAGCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: RAQAAPVSQLQSTQTTALACMAQ*QGQLRG
Trigger: TCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGC...CAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp ACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCGGATTCCCACCTTCTTaGCTGCATGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TGAQPRSHWCTALPCAPSGFPPS*LHGAVP
Trigger: TGGCACTGCGCCATGCAGGCAAGAAGGTGGGAATCC...GCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp AGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGCCGCGGTCGCACTGGTaGACAGCCCTGCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RTAEVPRSANCVDTRLPGPRSHW*TALPCA
Trigger: GGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGG...CCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR GCA 90 bp TGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGCACCCCCGTCTCACAGCTaGAGAGCACGCAGACCACGG +
Preference number: 4 (lower is better)
Translates to: WAGRGEALRLTLPGPAPAPPSHS*RARRPR
Trigger: CCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGG...TGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp TGGGGCCTCTCCACACCACGGCCTCGTCCGGCTTCTCCAGCAGGAAGCCCACAGCAGCCGCGGTCGCACTaGTGCACAGCCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WGLSTPRPRPASPAGSPQQPRSH*CTALPC
Trigger: GCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTG...CTGTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR CCA 90 bp AAGTCGTGGCCCTCCTCCAGGGTCCTCATGAGCGCAGGGTCCAGGGGCACGGAGCCCACGGACACCGCCTaGGGCGTGGTGACCACGAGG +
Preference number: 4 (lower is better)
Translates to: KSWPSSRVLMSAGSRGTEPTDTA*GVVTTR
Trigger: CCTCGTGGTCACCACGCCCCAGGCGGTGTCCGTGGG...CTCCGTGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGGAGGGCCACGACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp CGGAGCCTAAGAAGGGCACCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGCCCCTCCTGGATGAAGTCGTaGCCCTCCTCCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RSLRRAPRRAGPAPLRRPSWMKS*PSSRVL
Trigger: GAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGA...GGGGCGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAGGCTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp GTCAGCTCGCGCCTCACGTCCCCCACGGACACCGCCTGGGGCGTGGTGACCACGGACACATCCTGGGGCTaGGCTGGTCGGGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: VSSRLTSPTDTAWGVVTTDTSWG*AGRGEA
Trigger: AGCTTCTCCCCGACCAGCCCAGCCCCAGGATGTGTC...CGTGGTCACCACGCCCCAGGCGGTGTCCGTGGGGGACGTGAGGCGCGAGCTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR GCA 90 bp CTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCATGCACAGCCCTGCCCTaGGCCCCGAGCATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRTAEVPRSANCVDTRLPCTALP*APSMRG
Trigger: CCCCCGCATGCTCGGGGCGCAGGGCAGGGCTGTGCA...TGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR GCA 90 bp CTTGGGGCCTCTCCACACCACGGCCTCGTCCGGCTTCTCCAGCAGGAAGCCCACACTGGTGCACAGCCCTaGCCTGCGCCCCGAGCATGC +
Preference number: 4 (lower is better)
Translates to: LGASPHHGLVRLLQQEAHTGAQP*PAPRAC
Trigger: GCATGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGT...GTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp CTGGGGCTGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCTCTATGGTGGCCATGTaGTCATCGGAGGTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LGLGWSGRSSPADAAWACSMVAM*SSEVPG
Trigger: CCCGGGGACCTCCGATGAGCACATGGCCACCATAGA...GCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCAGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp AGAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACGGCTATGGAGGTGAGTaGAGCGAAGGCGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: REPRPPPSHSCRARRPRHGYGGE*SEGGAP
Trigger: GGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCC...GTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp GAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTCGCAGACCACGGCACTaGAGGCCAACCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ESPGRPRLTAAEHADHGTRRPRH*RPTRQS
Trigger: GCTCTGCCTGGTTGGCCTGCAGTGCCGTGGTCTGCG...AGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp AGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCCCCCGTCTCACAGCTaGAGAGCACGCAGACCACGG +
Preference number: 4 (lower is better)
Translates to: RAQAAPVSQLQSTQTTALPPSHS*RARRPR
Trigger: CCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGG...CAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp AGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCACCCCCGTCTCACAGCTaGAGAGCACGCAGACCACGG +
Preference number: 4 (lower is better)
Translates to: SPGRPRLTAAEHADHGTAPPSHS*RARRPR
Trigger: CCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGG...TGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp AGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGGTCACCTGAGGACTaGAGAAGTCCCGCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SPGRPRLTAAEHADHGTAGSPED*RSPALR
Trigger: GCGGAGCGCGGGACTTCTGCAGTCCTCAGGTGACCC...TGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR GCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCTCAGCGCTTCTTGCCTaGATGGCGCAGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCSALLA*MAQCQG
Trigger: GCCCTGGCACTGCGCCATGCAGGCAAGAAGCGCTGA...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp CGGAGCCTAAGAAGGGCACCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGCCCCGCAGGGCTTCTATGGTaGCCATGTGCTCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: RSLRRAPRRAGPAPLRRPAGLLW*PCAHRR
Trigger: CCTCCGATGAGCACATGGCCACCATAGAAGCCCTGC...GGGGCGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAGGCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp GTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGATGAAGTCGTGGCCCCCCACGGACACCGCCTaGGGCGTGGTGACCACGAGG +
Preference number: 4 (lower is better)
Translates to: VSAAKAGLPGNSWMKSWPPTDTA*GVVTTR
Trigger: CCTCGTGGTCACCACGCCCCAGGCGGTGTCCGTGGG...GGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCAC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp CTGGGGCTGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGGAGAAGACGCTaGTGCACTCCGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LGLGWSGRSSPADAAWACPWRRR*CTPCSV
Trigger: CACACTGCACGGAGTGCACCAGCGTCTTCTCCAGGG...GCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCAGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp AGAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACCCTCTCCGCCGCCCCTaGAGAAGACGCTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: REPRPPPSHSCRARRPRHPLRRP*RRRWCT
Trigger: AGTGCACCAGCGTCTTCTCCAGGGGCGGCGGAGAGG...GTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp AGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCCTCTCCGCCGCCCCTaGAGAAGACGCTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: RAQAAPVSQLQSTQTTALPLRRP*RRRWCT
Trigger: AGTGCACCAGCGTCTTCTCCAGGGGCGGCGGAGAGG...CAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp GAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCTCCGCTAACTGTGTaGACACGCGGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ESPGRPRLTAAEHADHGTAPLTV*TRGCQG
Trigger: CCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGC...AGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp AGAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACCGCTTCTTGCCTGCATaGCGCAGTGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: REPRPPPSHSCRARRPRHRFLPA*RSARAS
Trigger: GCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGCG...GTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568706.1
ENST00000568834.5
CDS-3UTR TCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCCAGGGAACTCCTGGATaGAGTCGTGGCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCQGTPG*SRGPPP
Trigger: TGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTG...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR TCA 90 bp TCTCCGCCGCCCCTGGAGAAGACGCTGGTGCACTCCGTGCAGTGTGGGCAGGTGTCTGGGCTATGGAGGTaGGTGCAGCGAAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SPPPLEKTLVHSVQCGQVSGLWR*VQRRRG
Trigger: GCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGA...CACCTGCCCACACTGCACGGAGTGCACCAGCGTCTTCTCCAGGGGCGGCGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR TCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGCCTCTGTTTCTCTaGGAGGCTGGAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCRPLFL*EAGAEP
Trigger: GGGCTCTGCTCCAGCCTCTCAGAGAAACAGAGGCCT...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp TCTATGGTGGCCATGTGCTCATCGGAGGTCCCCGGGGGCGTGTCCACCACCAGGGCCTGCATGGCGCAGTaGCAGGGCCAGCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: SMVAMCSSEVPGGVSTTRACMAQ*QGQLRG
Trigger: TCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGC...CCTGGTGGTGGACACGCCCCCGGGGACCTCCGATGAGCACATGGCCACCATAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCGCCCTGGAAAGCGGCTaGAAGGTGGCCTTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCALESG*KVALVR
Trigger: CCTGACTAAGGCCACCTTGCAGCCGCTTTCCAGGGC...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp TGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGCAGCCCTGGAAAGCGGCTaGAAGGTGGCCTTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: WAGRGEALRLTLPGPAPAALESG*KVALVR
Trigger: CCTGACTAAGGCCACCTTGCAGCCGCTTTCCAGGGC...TGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp CAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGCGCAGACCACGGCACTaGAGGCCAACCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QKSRAPLTVWTRGCQGHRRRPRH*RPTRQS
Trigger: GCTCTGCCTGGTTGGCCTGCAGTGCCGTGGTCTGCG...CCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR GCA 90 bp CGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGTAGGCAACATGGACAGCGACCCAGGGTaGTGGAGGCCCGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: RSANCVDTRLPGAQVGNMDSDPG*WRPGVT
Trigger: GGTGACCCCGGGCCTCCAGCACCCTGGGTCGCTGTC...CATGTTGCCTACCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp TGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGCACCAGCTCCGTGGAGATaGTGCTTTTCCCAACGCCCC +
Preference number: 4 (lower is better)
Translates to: WAGRGEALRLTLPGPAPAPAPWR*CFSQRP
Trigger: GGGGCGTTGGGAAAAGCACCATCTCCACGGAGCTGG...TGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp AAGAAGGGCACCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGCCCCGTGCAGTGCCAGGGCCAGCTCCGTaGAGATGGTGCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KKGTPASWASSSPPPRAVPGPAP*RWCFSQ
Trigger: TTGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGG...CACTGCACGGGGCGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569898.5
CDS-3UTR CCA 90 bp GAGCCTAAGAAGGGCACCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGCCCCGTGCAGGGCTTCTATGGTaGCCATGTGCTCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: EPKKGTPASWASSSPPPRAGLLW*PCAHRR
Trigger: CCTCCGATGAGCACATGGCCACCATAGAAGCCCTGC...ACGGGGCGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569898.5
CDS-3UTR CCA 90 bp CTGGGGCTGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCGACGCAGGGCTTCTATaGTGGCCATGTGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: LGLGWSGRSSPADAAWACDAGLL*WPCAHR
Trigger: CCGATGAGCACATGGCCACCATAGAAGCCCTGCGTC...GCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCAGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCGCACTCCGTGCAGTGTaGGCAGGTGAAGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCALRAV*AGEAAH
Trigger: ATGAGCGGCTTCACCTGCCCACACTGCACGGAGTGC...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCCTCCCAGGGAACTCCTaGATGAAGTCGTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCLPGNS*MKSWPS
Trigger: GGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAG...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp GGCCCTGGAAAGCGGCTGCAAGGTGGCCTTAGTCAGGGGAGGCACGCGGGCGTCAGCCCTTGGTGGCCCTaGAAAGCGGCTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPGKRLQGGLSQGRHAGVSPWWP*KAAARW
Trigger: CCACCTTGCAGCCGCTTTCCAGGGCCACCAAGGGCT...GACGCCCGCGTGCCTCCCCTGACTAAGGCCACCTTGCAGCCGCTTTCCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR CCA 90 bp AGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGGACACATCCTGGGGCTaGGCTGGTCGGGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RAQAAPVSQLQSTQTTALDTSWG*AGRGEA
Trigger: AGCTTCTCCCCGACCAGCCCAGCCCCAGGATGTGTC...CAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp GCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGCTCCGCTAACTGTGTaGACACGCGGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AEVPRSANCVDTRLPGAQAPLTV*TRGCQG
Trigger: CCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGC...CTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp GCCCGTCTTCCTACAGAAGGTCAGCTCGCGCCTCACGTCCCCCACGGACACCGCCCGCCCCGTGCAGTGTaGGCAGGTGAAGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ARLPTEGQLAPHVPHGHRPPRAV*AGEAAH
Trigger: ATGAGCGGCTTCACCTGCCCACACTGCACGGGGCGG...GCGGTGTCCGTGGGGGACGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569898.5
CDS-3UTR TCA 90 bp GAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGGAAGCCCACAGACATaGGCGAGATGCTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ESPGRPRLTAAEHADHGTGSPQT*ARCSAP
Trigger: GGGAGCAGAGCATCTCGCTCATGTCTGTGGGCTTCC...AGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR TCA 90 bp CTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCACCTCCAGGGTCCTCATaGGCGCAGGGTCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRTAEVPRSANCVDTRLPPPGSS*AQGPGA
Trigger: TGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGG...TGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR GCA 90 bp GCACGCGGGCGTCGCGTCCAGAATCTTCTGGGCTATGGAGGTGAGTGCAGCGAACCAGGAGCTCGCGGCTaGAGTCCGCTTACGCCCGCG +
Preference number: 4 (lower is better)
Translates to: ARGRRVQNLLGYGGECSEPGARG*SPLTPA
Trigger: CGCGGGCGTAAGCGGACTGCAGCCGCGAGCTCCTGG...TTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCGACGCCCGCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR GCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGAGGACCAGGATGATGTaGCTGACGCCGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRRTRMM*LTPARF
Trigger: AAACCTGGCCGGCGTCAGGCACATCATCCTGGTCCT...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp GCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGTCCCACCTTCTTGCCTaGATGGCGCAGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AEVPRSANCVDTRLPGAQSHLLA*MAQCQG
Trigger: GCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGGGA...CTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR GCA 90 bp CTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGTCCAGGAAGACGGGTaGCCAGCCGCGGTCGCACTG +
Preference number: 4 (lower is better)
Translates to: LRTAEVPRSANCVDTRLPVQEDG*PAAVAL
Trigger: CAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGAC...TGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR GCA 90 bp CTCCCCGAGCTAAACACAGATGACAGCGACCCAGGGTGCTGGAGGCCCGGGGTCCGCAGACCACGGCACTaGAGGCCAACCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPELNTDDSDPGCWRPGVRRPRH*RPTRQS
Trigger: GCTCTGCCTGGTTGGCCTGCAGTGCCGTGGTCTGCG...GACCCCGGGCCTCCAGCACCCTGGGTCGCTGTCATCTGTGTTTAGCTCGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp GAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTCCAGCTCCGTGGAGATaGTGCTTTTCCCAACGCCCC +
Preference number: 4 (lower is better)
Translates to: ESPGRPRLTAAEHADHGTPAPWR*CFSQRP
Trigger: GGGGCGTTGGGAAAAGCACCATCTCCACGGAGCTGG...AGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp TGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGCACCAGGGCCAGCTCCGTaGAGATGGTGCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: WAGRGEALRLTLPGPAPAPGPAP*RWCFSQ
Trigger: TTGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGG...TGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCTCAGCGCGTTTTTCTTaGGGCCTCTCCACACCACGG +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCSARFS*GLSTPR
Trigger: CCGTGGTGTGGAGAGGCCCCAAGAAAAACGCGCTGA...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR CCA 90 bp GAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTTCCTGGATGAAGTCGTaGCCCTCCTCCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ESPGRPRLTAAEHADHGTSWMKS*PSSRVL
Trigger: GAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGA...AGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp TGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCCCCTGCAGTTTCTCTGAGAGGCTaGAGCAGAGCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WAGRGEALRLTLPGPAPAVSLRG*SRALGG
Trigger: GCCACCAAGGGCTCTGCTCCAGCCTCTCAGAGAAAC...TGCAGGGGCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp TCTATGGTGGCCATGTGCTCATCGGAGGTCCCCGGGGGCGTGTCCACCACCAGGCGCTTCTTGCCTGCATaGCGCAGTGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SMVAMCSSEVPGGVSTTRRFLPA*RSARAS
Trigger: GCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGCG...CCTGGTGGTGGACACGCCCCCGGGGACCTCCGATGAGCACATGGCCACCATAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp GACGCAGGGCTTCTATGGTGGCCATGTGCTCATCGGAGGTCCCCGGGGGCGTGTCGCTTCTTGCCTGCATaGCGCAGTGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DAGLLWWPCAHRRSPGACRFLPA*RSARAS
Trigger: GCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGCG...ACACGCCCCCGGGGACCTCCGATGAGCACATGGCCACCATAGAAGCCCTGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR TCA 90 bp GGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCAGGGAACTCCTGGATaGAGTCGTGGCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLQKSRAPLTVWTRGCQGQGTPG*SRGPPP
Trigger: TGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTG...CCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR TCA 90 bp CGCAGGGCTTCTATGGTGGCCATGTGCTCATCGGAGGTCCCCGGGGGCGTGTCCCAGGGAACTCCTGGATaGAGTCGTGGCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRASMVAMCSSEVPGGVSQGTPG*SRGPPP
Trigger: TGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTG...GGACACGCCCCCGGGGACCTCCGATGAGCACATGGCCACCATAGAAGCCCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp AGAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACGGATTCCCACCTTCTTaGCTGCATGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: REPRPPPSHSCRARRPRHGFPPS*LHGAVP
Trigger: TGGCACTGCGCCATGCAGGCAAGAAGGTGGGAATCC...GTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR GCA 90 bp CGCGTCCAGAATCTTCTGGGCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTCCCGGGTCACCTGAGGACTaGAGAAGTCCCGCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RVQNLLGYGGECSEGGAPGSPED*RSPALR
Trigger: GCGGAGCGCGGGACTTCTGCAGTCCTCAGGTGACCC...GGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR CCA 90 bp AGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCCAGGGCCAGCTCCGTaGAGATGGTGCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RAQAAPVSQLQSTQTTALPGPAP*RWCFSQ
Trigger: TTGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGG...CAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp TGTGCTCATCGGAGGTCCCCGGGGGCGTGTCCACCACCAGGTAGTCCAGCTCCCGCATGCGGGGGATACTaGGGCCACACAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: CAHRRSPGACPPPGSPAPACGGY*GHTGPH
Trigger: ATGTGGACCTGTGTGGCCCCAGTATCCCCCGCATGC...GGGAGCTGGACTACCTGGTGGTGGACACGCCCCCGGGGACCTCCGATGAGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR CCA 90 bp AGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGCAGGGCTTCTATGGTaGCCATGTGCTCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGRPRLTAAEHADHGTAAGLLW*PCAHRR
Trigger: CCTCCGATGAGCACATGGCCACCATAGAAGCCCTGC...TGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp GCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGCCCTGGAGAAGACGCTaGTGCACTCCGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AEVPRSANCVDTRLPGAQPWRRR*CTPCSV
Trigger: CACACTGCACGGAGTGCACCAGCGTCTTCTCCAGGG...CTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp GGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGTCCTGGATGAAGTCGTaGCCCTCCTCCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLQKSRAPLTVWTRGCQGSWMKS*PSSRVL
Trigger: GAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGA...CCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp GGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCTCCCAGGGAACTCCTaGATGAAGTCGTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLQKSRAPLTVWTRGCQGLPGNS*MKSWPS
Trigger: GGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAG...CCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp CTGGGGCTGGGCTGGTCGGGGAGAAGCTCTCCGGCTGACGCTGCCTGGGCCTGCGCGTCCAGAATCTTCTaGGCTATGGAGGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LGLGWSGRSSPADAAWACASRIF*AMEVSA
Trigger: TGCACTCACCTCCATAGCCCAGAAGATTCTGGACGC...GCAGGCCCAGGCAGCGTCAGCCGGAGAGCTTCTCCCCGACCAGCCCAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262302.14
ENST00000568706.1
ENST00000568834.5
CDS-3UTR CCA 90 bp CTCCCCGAGCTAAACACAGATGACAGCGACCCAGGGTGCTGGAGGCCCGGGGTCGACACATCCTGGGGCTaGGCTGGTCGGGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LPELNTDDSDPGCWRPGVDTSWG*AGRGEA
Trigger: AGCTTCTCCCCGACCAGCCCAGCCCCAGGATGTGTC...GACCCCGGGCCTCCAGCACCCTGGGTCGCTGTCATCTGTGTTTAGCTCGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp CAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGGGTAGGCAACATGGATaGGAAGAGAGCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QKSRAPLTVWTRGCQGHRGRQHG*EESPGR
Trigger: GCGGCCTGGGCTCTCTTCCCATCCATGTTGCCTACC...CCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR TCA 90 bp ACGATTCCCATCACCCGCAAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGCCTCCCTCCAGGGTCCTCATaGGCGCAGGGTCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TIPITRKPVFLQKVSSRLPPGSS*AQGPGA
Trigger: TGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGG...GAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGCTTGCGGGTGATGGGAATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp GGGCCTCTCCACACCACGGCCTCGTCCGGCTTCTCCAGCAGGAAGCCCACAGACAGGACCAGGATGATGTaGCTGACGCCGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GPLHTTASSGFSSRKPTDRTRMM*LTPARF
Trigger: AAACCTGGCCGGCGTCAGGCACATCATCCTGGTCCT...GTCTGTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp GATACTGGGGCCACACAGGTCCACATCCAGGATTCCCACCTTCTTGCCTGCATGTGCACAGCCCTGCCCTaGGCCCCGAGCATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: DTGATQVHIQDSHLLACMCTALP*APSMRG
Trigger: CCCCCGCATGCTCGGGGCGCAGGGCAGGGCTGTGCA...CATGCAGGCAAGAAGGTGGGAATCCTGGATGTGGACCTGTGTGGCCCCAGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp TGGGGCCTCTCCACACCACGGCCTCGTCCGGCTTCTCCAGCAGGAAGCCCACAGATGAGCGAGATGCTCTaGTCCCGGTCCAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: WGLSTPRPRPASPAGSPQMSEML*SRSRKT
Trigger: CGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCAT...CTGTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp GCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGATGAAGGGCTATGGAGGTGAGTaGAGCGAAGGCGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: AMEVSAAKAGLPGNSWMKGYGGE*SEGGAP
Trigger: GGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCC...CTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp CGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGTAGGCAACATGTCAGCGCTTCTTGCCTaGATGGCGCAGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSANCVDTRLPGAQVGNMSALLA*MAQCQG
Trigger: GCCCTGGCACTGCGCCATGCAGGCAAGAAGCGCTGA...CATGTTGCCTACCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR GCA 90 bp AAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGCCTCACGTCCCCCACGGACACCTCAGCGCTTCTTGCCTaGATGGCGCAGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KPVFLQKVSSRLTSPTDTSALLA*MAQCQG
Trigger: GCCCTGGCACTGCGCCATGCAGGCAAGAAGCGCTGA...GGTGTCCGTGGGGGACGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp GAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCTTTATCAGCGCTTCTTaGCTGCATGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: EPRPPPSHSCRARRPRHCFISAS*LHGAVP
Trigger: TGGCACTGCGCCATGCAGGCAAGAAGCGCTGATAAA...GCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp GTCGTGGCCCTCCTCCAGGGTCCTCATGAGCGCAGGGTCCAGGGGCACGGAGCCTTTATCAGCGCTTCTTaGCTGCATGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VVALLQGPHERRVQGHGAFISAS*LHGAVP
Trigger: TGGCACTGCGCCATGCAGGCAAGAAGCGCTGATAAA...GGCTCCGTGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGGAGGGCCACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp TCCAGGGTCCTCATGAGCGCAGGGTCCAGGGGCACGGAGCCTAAGAAGGGCACCCCAGCTCCGTGGAGATaGTGCTTTTCCCAACGCCCC +
Preference number: 4 (lower is better)
Translates to: SRVLMSAGSRGTEPKKGTPAPWR*CFSQRP
Trigger: GGGGCGTTGGGAAAAGCACCATCTCCACGGAGCTGG...GGTGCCCTTCTTAGGCTCCGTGCCCCTGGACCCTGCGCTCATGAGGACCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp CTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAACCTTCTTGCCTGCATaGCGCAGTGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRTAEVPRSANCVDTRLPTFLPA*RSARAS
Trigger: GCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGT...TGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR CCA 90 bp AGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCATGCGGGGGATACTaGGGCCACACAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: RTAEVPRSANCVDTRLPGACGGY*GHTGPH
Trigger: ATGTGGACCTGTGTGGCCCCAGTATCCCCCGCATGC...CCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR CCA 90 bp CTCCCCGAGCTAAACACAGATGACAGCGACCCAGGGTGCTGGAGGCCCGGGGTCGCACTCCGTGCAGTGTaGGCAGGTGAAGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: LPELNTDDSDPGCWRPGVALRAV*AGEAAH
Trigger: ATGAGCGGCTTCACCTGCCCACACTGCACGGAGTGC...GACCCCGGGCCTCCAGCACCCTGGGTCGCTGTCATCTGTGTTTAGCTCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp CTCCCCGAGCTAAACACAGATGACAGCGACCCAGGGTGCTGGAGGCCCGGGGTCCTCCCAGGGAACTCCTaGATGAAGTCGTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LPELNTDDSDPGCWRPGVLPGNS*MKSWPS
Trigger: GGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAG...GACCCCGGGCCTCCAGCACCCTGGGTCGCTGTCATCTGTGTTTAGCTCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp CTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAAGCCCTTGGTGGCCCTaGAAAGCGGCTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRTAEVPRSANCVDTRLPSPWWP*KAAARW
Trigger: CCACCTTGCAGCCGCTTTCCAGGGCCACCAAGGGCT...TGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp TTGGTGGCCCTGGAAAGCGGCTGCAAGGTGGCCTTAGTCAGGGGAGGCACGCGGGGTAGGCAACATGGATaGGAAGAGAGCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LVALESGCKVALVRGGTRGRQHG*EESPGR
Trigger: GCGGCCTGGGCTCTCTTCCCATCCATGTTGCCTACC...CCGCGTGCCTCCCCTGACTAAGGCCACCTTGCAGCCGCTTTCCAGGGCCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR TCA 90 bp CTGCATGGCGCAGTGCCAGGGCCAGCTCCGTGGAGATGGTGCTTTTCCCAACGCGGAAGCCCACAGACATaGGCGAGATGCTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LHGAVPGPAPWRWCFSQRGSPQT*ARCSAP
Trigger: GGGAGCAGAGCATCTCGCTCATGTCTGTGGGCTTCC...GCGTTGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR TCA 90 bp ATCACCCGCAAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGCCTCACGTCCCCCCAGGGAACTCCTGGATaGAGTCGTGGCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ITRKPVFLQKVSSRLTSPQGTPG*SRGPPP
Trigger: TGGAGGAGGGCCACGACTTCATCCAGGAGTTCCCTG...GGGGGACGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGCTTGCGGGTGAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR TCA 90 bp CTTCTGGGCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTGAGGCCTCTGTTTCTCTaGGAGGCTGGAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLGYGGECSEGGAPRELLRPLFL*EAGAEP
Trigger: GGGCTCTGCTCCAGCCTCTCAGAGAAACAGAGGCCT...CAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR GCA 90 bp CTCCCCGAGCTAAACACAGATGACAGCGACCCAGGGTGCTGGAGGCCCGGGGTCAGGACCAGGATGATGTaGCTGACGCCGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LPELNTDDSDPGCWRPGVRTRMM*LTPARF
Trigger: AAACCTGGCCGGCGTCAGGCACATCATCCTGGTCCT...GACCCCGGGCCTCCAGCACCCTGGGTCGCTGTCATCTGTGTTTAGCTCGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR GCA 90 bp AACTCCACGACTCAGGCCCTCCGAGATCACGGAGCTTCCACATCGAAGCAGGAGGTCCAGGAAGACGGGTaGCCAGCCGCGGTCGCACTG +
Preference number: 4 (lower is better)
Translates to: NSTTQALRDHGASTSKQEVQEDG*PAAVAL
Trigger: CAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGAC...CTCCTGCTTCGATGTGGAAGCTCCGTGATCTCGGAGGGCCTGAGTCGTGGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp AAGGTGGCCTTAGTCAGGGGAGGCACGCGGGCGTCGCGTCCAGAATCTTCTGGGTCTATGGTGGCCATGTaGTCATCGGAGGTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KVALVRGGTRASRPESSGSMVAM*SSEVPG
Trigger: CCCGGGGACCTCCGATGAGCACATGGCCACCATAGA...CCCAGAAGATTCTGGACGCGACGCCCGCGTGCCTCCCCTGACTAAGGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR GCA 90 bp ATCACCCGCAAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGCCTCACGTCCCCCTCTATGGTGGCCATGTaGTCATCGGAGGTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ITRKPVFLQKVSSRLTSPSMVAM*SSEVPG
Trigger: CCCGGGGACCTCCGATGAGCACATGGCCACCATAGA...GGGGGACGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGCTTGCGGGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp AACTGTGTGGACACGCGGCTGCCAGGGGCACAGGTAGGCAACATGGATGGGAAGGGCTATGGAGGTGAGTaGAGCGAAGGCGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NCVDTRLPGAQVGNMDGKGYGGE*SEGGAP
Trigger: GGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCC...CTTCCCATCCATGTTGCCTACCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp CACCTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGCTCCGTGGAGATaGTGCTTTTCCCAACGCCCC +
Preference number: 4 (lower is better)
Translates to: HLRTAEVPRSANCVDTRLPAPWR*CFSQRP
Trigger: GGGGCGTTGGGAAAAGCACCATCTCCACGGAGCTGG...CAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp CTGGGCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGATCCCTGGAGAAGACGCTaGTGCACTCCGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LGYGGECSEGGAPRELLDPWRRR*CTPCSV
Trigger: CACACTGCACGGAGTGCACCAGCGTCTTCTCCAGGG...ATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR CCA 90 bp TGGGCTATGGAGGTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGATGCTCCCAGGGAACTCCTaGATGAAGTCGTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: WAMEVSAAKAGLPGNSWMLPGNS*MKSWPS
Trigger: GGAGGGCCACGACTTCATCCAGGAGTTCCCTGGGAG...CATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp TCTCCACGATTCCCATCACCCGCAAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGGCTATGGAGGTGAGTaGAGCGAAGGCGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPRFPSPASPSSYRRSARGYGGE*SEGGAP
Trigger: GGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCC...GCGAGCTGACCTTCTGTAGGAAGACGGGCTTGCGGGTGATGGGAATCGTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp GGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGTTTATCAGCGCTTCTTaGCTGCATGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLQKSRAPLTVWTRGCQGFISAS*LHGAVP
Trigger: TGGCACTGCGCCATGCAGGCAAGAAGCGCTGATAAA...CCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR GCA 90 bp CCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCAGGACGTCGGACACAAACTaGTTTATCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PRPPPSHSCRARRPRHCRTSDTN*FISASC
Trigger: GCAAGAAGCGCTGATAAAGCAGTTTGTGTCCGACGT...CCTGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568706.1
ENST00000568834.5
CDS-3UTR GCA 90 bp GAAGGTCAGCTCGCGCCTCACGTCCCCCACGGACACCGCCTGGGGCGTGGTGACACGTCGGACACAAACTaGTTTATCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: EGQLAPHVPHGHRLGRGDTSDTN*FISASC
Trigger: GCAAGAAGCGCTGATAAAGCAGTTTGTGTCCGACGT...GTCACCACGCCCCAGGCGGTGTCCGTGGGGGACGTGAGGCGCGAGCTGACCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR GCA 90 bp GTCGTGGCCCTCCTCCAGGGTCCTCATGAGCGCAGGGTCCAGGGGCACGGAGCCACGTCGGACACAAACTaGTTTATCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VVALLQGPHERRVQGHGATSDTN*FISASC
Trigger: GCAAGAAGCGCTGATAAAGCAGTTTGTGTCCGACGT...GGCTCCGTGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGGAGGGCCACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp CACCTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGGACGCAGGGCTTCTATaGTGGCCATGTGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: HLRTAEVPRSANCVDTRLDAGLL*WPCAHR
Trigger: CCGATGAGCACATGGCCACCATAGAAGCCCTGCGTC...CAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp AAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGCCTCACGTCCCCCACGGACACCGACGCAGGGCTTCTATaGTGGCCATGTGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: KPVFLQKVSSRLTSPTDTDAGLL*WPCAHR
Trigger: CCGATGAGCACATGGCCACCATAGAAGCCCTGCGTC...GGTGTCCGTGGGGGACGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp GCACGCGGGCGTCGCGTCCAGAATCTTCTGGGCTATGGAGGTGAGTGCAGCGAAGCACTCCGTGCAGTGTaGGCAGGTGAAGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ARGRRVQNLLGYGGECSEALRAV*AGEAAH
Trigger: ATGAGCGGCTTCACCTGCCCACACTGCACGGAGTGC...TTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCGACGCCCGCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR CCA 90 bp CACCTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGGTTTCTCTGAGAGGCTaGAGCAGAGCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLRTAEVPRSANCVDTRLVSLRG*SRALGG
Trigger: GCCACCAAGGGCTCTGCTCCAGCCTCTCAGAGAAAC...CAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR TCA 90 bp GCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGTTACAAAACATGCCTaGGGTCAGTTCGCCCCCTTA +
Preference number: 4 (lower is better)
Translates to: AEVPRSANCVDTRLPGAQVTKHA*GQFAPL
Trigger: TAAGGGGGCGAACTGACCTCAGGCATGTTTTGTAAC...CTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR GCA 90 bp ACCAGGATGATGTGCCTGACGCCGGCCAGGTTTCCAGGCTACTTTTCTGAACACCGCTCTTGCCCGGGCTaGGGTGCAGTTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: TRMMCLTPARFPGYFSEHRSCPG*GAVATA
Trigger: CGCGGTTGCAACTGCACCGCAGCCCGGGCAAGAGCG...GTGTTCAGAAAAGTAGCCTGGAAACCTGGCCGGCGTCAGGCACATCATCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp GACGGGTGCCCAGCCGCGGTCGCACTGGTGCACAGCCCTGCCCTGCGCCCCGAGTCTTACTTTCATGACTaGGCGCGTGTGATTTATTTA +
Preference number: 4 (lower is better)
Translates to: DGCPAAVALVHSPALRPESYFHD*ARVIYL
Trigger: TAAATAAATCACACGCGCGCAGTCATGAAAGTAAGA...CTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp AACTGTGTGGACACGCGGCTGCCAGGGGCACAGGTAGGCAACATGGATGGGAAGATGAGCGAGATGCTCTaGTCCCGGTCCAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: NCVDTRLPGAQVGNMDGKMSEML*SRSRKT
Trigger: CGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCAT...CTTCCCATCCATGTTGCCTACCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR CCA 90 bp AACTGTGTGGACACGCGGCTGCCAGGGGCACAGGTAGGCAACATGGATGGGAAGGCAGGGCTTCTATGGTaGCCATGTGCTCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: NCVDTRLPGAQVGNMDGKAGLLW*PCAHRR
Trigger: CCTCCGATGAGCACATGGCCACCATAGAAGCCCTGC...CTTCCCATCCATGTTGCCTACCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp GTGCAGTGTGGGCAGGTGAAGCCGCTCATATTCTCCACGATTCCCATCACCCGCTCCTGGATGAAGTCGTaGCCCTCCTCCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VQCGQVKPLIFSTIPITRSWMKS*PSSRVL
Trigger: GAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGA...GCGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR CCA 90 bp CTGAGGACTGCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGCGTCCAGAATCTTCTaGGCTATGGAGGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LRTAEVPRSANCVDTRLPASRIF*AMEVSA
Trigger: TGCACTCACCTCCATAGCCCAGAAGATTCTGGACGC...TGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262302.14
ENST00000568834.5
CDS-3UTR CCA 90 bp AGAGCCCTTGGTGGCCCTGGAAAGCGGCTGCAAGGTGGCCTTAGTCAGGGGAGGGCGTCCAGAATCTTCTaGGCTATGGAGGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RALGGPGKRLQGGLSQGRASRIF*AMEVSA
Trigger: TGCACTCACCTCCATAGCCCAGAAGATTCTGGACGC...CCTCCCCTGACTAAGGCCACCTTGCAGCCGCTTTCCAGGGCCACCAAGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR CCA 90 bp ATTCCCATCACCCGCAAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGCCTCACGGTTTCTCTGAGAGGCTaGAGCAGAGCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: IPITRKPVFLQKVSSRLTVSLRG*SRALGG
Trigger: GCCACCAAGGGCTCTGCTCCAGCCTCTCAGAGAAAC...CGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGGGCTTGCGGGTGATGGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR CCA 90 bp CAGGATAGCGGGGCCCACAGGCGCCACCGCGCCCGCCTACAACGCGGTGCTCAAAAGCATGTGAGATTCTaGCGTCCGTCTTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: QDSGAHRRHRARLQRGAQKHVRF*RPSYFH
Trigger: ATGAAAGTAAGACGGACGCCAGAATCTCACATGCTT...TTGAGCACCGCGTTGTAGGCGGGCGCGGTGGCGCCTGTGGGCCCCGCTATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp GCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGACGTCGGACACAAACTaGTTTATCAGCGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AEVPRSANCVDTRLPGAQTSDTN*FISAFF
Trigger: GAAAAACGCGCTGATAAAGCAGTTTGTGTCCGACGT...CTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR CCA 90 bp CGCCGGCCAGGTTTCCAGGCTACTTTTCTGAACACTGAGAGCGCCACTTCCACACCAGCTCCGTGGAGATaGTGCTTTTCCCAACGCCCC +
Preference number: 4 (lower is better)
Translates to: RRPGFQATFLNTESATSTPAPWR*CFSQRP
Trigger: GGGGCGTTGGGAAAAGCACCATCTCCACGGAGCTGG...TGTGGAAGTGGCGCTCTCAGTGTTCAGAAAAGTAGCCTGGAAACCTGGCCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR CCA 90 bp TCTCCACGATTCCCATCACCCGCAAGCCCGTCTTCCTACAGAAGGTCAGCTCGCGACGCAGGGCTTCTATaGTGGCCATGTGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: SPRFPSPASPSSYRRSARDAGLL*WPCAHR
Trigger: CCGATGAGCACATGGCCACCATAGAAGCCCTGCGTC...GCGAGCTGACCTTCTGTAGGAAGACGGGCTTGCGGGTGATGGGAATCGTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS-3UTR TCA 90 bp CCAGGATTCCCACCTTCTTGCCTGCATGGCGCAGTGCCAGGGCCAGCTCCGTGGTACTTTTCTGAACACTaGGAGCGCCACTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: PGFPPSCLHGAVPGPAPWYFSEH*ERHFHK
Trigger: TTTGTGGAAGTGGCGCTCTCAGTGTTCAGAAAAGTA...CCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGGGAATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp GTGAAGCCGCTCATATTCTCCACGATTCCCATCACCCGCAAGCCCGTCTTCCTAGCCCTGGAAAGCGGCTaGAAGGTGGCCTTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VKPLIFSTIPITRKPVFLALESG*KVALVR
Trigger: CCTGACTAAGGCCACCTTGCAGCCGCTTTCCAGGGC...TAGGAAGACGGGCTTGCGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR CCA 90 bp CGCCGGCCAGGTTTCCAGGCTACTTTTCTGAACACTGAGAGCGCCACTTCCACATCAGCGCGTTTTTCTTaGGGCCTCTCCACACCACGG +
Preference number: 4 (lower is better)
Translates to: RRPGFQATFLNTESATSTSARFS*GLSTPR
Trigger: CCGTGGTGTGGAGAGGCCCCAAGAAAAACGCGCTGA...TGTGGAAGTGGCGCTCTCAGTGTTCAGAAAAGTAGCCTGGAAACCTGGCCGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR TCA 90 bp AAGCCCACAGACATGAGCGAGATGCTCTGCTCCCGGTCCAGGAAGACGGGTGCCTCCGTCTTACTTTCATaGCTGCGCGCGTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: KPTDMSEMLCSRSRKTGASVLLS*LRACDL
Trigger: TAAATCACACGCGCGCAGTCATGAAAGTAAGACGGA...GGCACCCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCTCATGTCTGTGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR TCA 90 bp GCCTCTCCACACCACGGCCTCGTCCGGCTTCTCCAGCAGGAAGCCCACAGACATGAACTTAAAAGCATGTaGGATTCTGGCGTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: ASPHHGLVRLLQQEAHRHELKSM*DSGVRL
Trigger: AAGACGGACGCCAGAATCTCACATGCTTTTAAGTTC...ATGTCTGTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR TCA 90 bp GTGCAGTGTGGGCAGGTGAAGCCGCTCATATTCTCCACGATTCCCATCACCCGCGTTACAAAACATGCCTaGGGTCAGTTCGCCCCCTTA +
Preference number: 4 (lower is better)
Translates to: VQCGQVKPLIFSTIPITRVTKHA*GQFAPL
Trigger: TAAGGGGGCGAACTGACCTCAGGCATGTTTTGTAAC...GCGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS-3UTR CCA 90 bp GCGCCCGCCTACAACGCGGTGCTCAACAAAGTTAACTTTAAAAGCTCCCCCAACCCAGGGCCAGCTCCGTaGAGATGGTGCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: APAYNAVLNKVNFKSSPNPGPAP*RWCFSQ
Trigger: TTGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGG...GTTGGGGGAGCTTTTAAAGTTAACTTTGTTGAGCACCGCGTTGTAGGCGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR TCA 90 bp GGCGCCACCGCGCCCGCCTACAACGCGGTGCTCAACAAAGTTAACTTTAAAAGCTCCAGGCTACTTTTCTaGACACTGAGAGCGCCACTT +
Preference number: 4 (lower is better)
Translates to: GATAPAYNAVLNKVNFKSSRLLF*TLRAPL
Trigger: AAGTGGCGCTCTCAGTGTTCAGAAAAGTAGCCTGGA...GCTTTTAAAGTTAACTTTGTTGAGCACCGCGTTGTAGGCGGGCGCGGTGGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp CCTACAACGCGGTGCTCAACAAAGTTAACTTTAAAAGCTCCCCCAACTCCACGATCCCACCTTCTTGCCTaGATGGCGCAGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PTTRCSTKLTLKAPPTPRSHLLA*MAQCQG
Trigger: GCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGGGA...TCGTGGAGTTGGGGGAGCTTTTAAAGTTAACTTTGTTGAGCACCGCGTTGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp GCGCCCGCCTACAACGCGGTGCTCAACAAAGTTAACTTTAAAAGCTCCCCCAACACGTCGGACACAAACTaGTTTATCAGCGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: APAYNAVLNKVNFKSSPNTSDTN*FISAFF
Trigger: GAAAAACGCGCTGATAAAGCAGTTTGTGTCCGACGT...GTTGGGGGAGCTTTTAAAGTTAACTTTGTTGAGCACCGCGTTGTAGGCGGGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS-3UTR GCA 90 bp CGGCCAGGTTTCCAGGCTACTTTTCTGAACACTGAGAGCGCCACTTCCACAAAGCCGCCTACAACGCGGTaGTCAACAAAGTTAACTTTA +
Preference number: 4 (lower is better)
Translates to: RPGFQATFLNTESATSTKPPTTR*STKLTL
Trigger: TAAAGTTAACTTTGTTGAGCACCGCGTTGTAGGCGG...CTTTGTGGAAGTGGCGCTCTCAGTGTTCAGAAAAGTAGCCTGGAAACCTGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS GCA 90 bp CGCTGCAAAGACGGGGCAGACGGGGCGGTCAGGGCAGGGCAGGTCTaGACACGTGGCCCTGCGCCACTAAGAACCAGCCAGGTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: RCKDGADGAVRAGQV*TRGPAPLRTSQVRP
Trigger: CGGCCTGACCTGGCTGGTTCTTAGTGGCGCAGGGCCACGTGTGCAGACCTGCCCTGCCCTGACCGCCCCGTCTGCCCCGTCTTTGCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS GCA 90 bp CTGGTGCCCACTGTGCCCACACACGCGGGGTCACCCACTGCCTCTTaGACCCACGTTCTGAGCGGGGCAGTGGTGAATCGCCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: LVPTVPTHAGSPTAS*THVLSGAVVNRQTQ
Trigger: CTGGGTCTGGCGATTCACCACTGCCCCGCTCAGAACGTGGGTGCAAGAGGCAGTGGGTGACCCCGCGTGTGTGGGCACAGTGGGCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS GCA 90 bp AGGGCTCCTGGTGCCCACTGTGCCCACACACGCGGGGTCACCCACTaGCTCTTGCACCCACGTTCTGAGCGGGGCAGTGGTGAATCGCCA +
Preference number: 5 (lower is better)
Translates to: RAPGAHCAHTRGVTH*LLHPRSERGSGESP
Trigger: TGGCGATTCACCACTGCCCCGCTCAGAACGTGGGTGCAAGAGGCAGTGGGTGACCCCGCGTGTGTGGGCACAGTGGGCACCAGGAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS CCA 90 bp GGGCTCCGCCCAGTGAGGGGTAGGGCGCTCACCTTCTTGCCTGCATaGCGCAGTGCCAGGGCCAGCTCCGTGGAGATGGTGCTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: GLRPVRGRALTFLPA*RSARASSVEMVLFP
Trigger: TGGGAAAAGCACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGAGCGCCCTACCCCTCACTGGGCGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563821.1
ENST00000565603.5
ENST00000567700.5
CDS CCA 90 bp ACTGGTGCACAGCCCTGCCCTGCGCCCCGAGCATGCGGGGGATACTaGGGCCACACAGGTCCACATCCAGGATTCCCACCTGCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: TGAQPCPAPRACGGY*GHTGPHPGFPPARS
Trigger: GCTCCTTGCAGGTGGGAATCCTGGATGTGGACCTGTGTGGCCCCAGTATCCCCCGCATGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563136.5
ENST00000563821.1
ENST00000565603.5
ENST00000566447.5
ENST00000567700.5
CDS CCA 90 bp GCACGGACCCAACTGGAGACACACCGCCAGCCTGAGCCCTGTGCCTaGTCGTGGGTGTCATGTGCAGGTCCCCAGGAACAGGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ARTQLETHRQPEPCA*SWVSCAGPQEQAWL
Trigger: CAGCCAGGCCTGTTCCTGGGGACCTGCACATGACACCCACGACCAGGCACAGGGCTCAGGCTGGCGGTGTGTCTCCAGTTGGGTCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 90 bp GGTGTCACTTGCCACCAGCCTCCATCACAGGCTCTCGGGAGGCCCTaGCCCGCTGCAGGAGTGCAAAGATGGGGCCGGGGCCATTACAGC +
Preference number: 5 (lower is better)
Translates to: GVTCHQPPSQALGRP*PAAGVQRWGRGHYS
Trigger: GCTGTAATGGCCCCGGCCCCATCTTTGCACTCCTGCAGCGGGCCAGGGCCTCCCGAGAGCCTGTGATGGAGGCTGGTGGCAAGTGACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS-3UTR CAA 90 bp AGAGAGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACAGGATTCCCACCTTCTaGCCTGCATGGCGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: REPRPPPSHSCRARRPRHRIPTF*PAWRSA
Trigger: GGCACTGCGCCATGCAGGCAAGAAGGTGGGAATCCT...GTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS TCA 90 bp CGCCCCCTCTGCAACCCCCGGGACTCACCGTGCAGTGTGGGCAGGTaGAGCCGCTCATATTCTCCACGATTCCCATCACCCGCAAGCCCG +
Preference number: 5 (lower is better)
Translates to: RPLCNPRDSPCSVGR*SRSYSPRFPSPASP
Trigger: CGGGCTTGCGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCACGGTGAGTCCCGGGGGTTGCAGAGGGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565134.5
CDS TCA 90 bp CAGCTGTGTGGCAGCACGGACCCAACTGGAGACACACCGCCAGCCTaGGCCCTGTGCCTGGTCGTGGGTGTCATGTGCAGGTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: QLCGSTDPTGDTPPA*ALCLVVGVMCRSPG
Trigger: TCCTGGGGACCTGCACATGACACCCACGACCAGGCACAGGGCTCAGGCTGGCGGTGTGTCTCCAGTTGGGTCCGTGCTGCCACACAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS GCA 90 bp GGGCGGAAACACGACAGAGAAGGTCAGGGCTCCTGGTGCCCACTGTaGCCACACACGCGGGGTCACCCACTGCCTCTTGCACCCACGTTC +
Preference number: 5 (lower is better)
Translates to: GRKHDREGQGSWCPL*PHTRGHPLPLAPTF
Trigger: GAACGTGGGTGCAAGAGGCAGTGGGTGACCCCGCGTGTGTGGGCACAGTGGGCACCAGGAGCCCTGACCTTCTCTGTCGTGTTTCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS GCA 90 bp GCGTCTGTACCCACACATGGGAGCACCCACATTCTCCGTGGTGGATaGCCCACTGGTGCACCCACAGCCTGCGCCTCACTCCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: ASVPTHGSTHILRGG*PTGAPTACASLPPA
Trigger: GGCTGGTGGGAGTGAGGCGCAGGCTGTGGGTGCACCAGTGGGGCATCCACCACGGAGAATGTGGGTGCTCCCATGTGTGGGTACAGACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS GCA 90 bp TTGCCACCAGCCTCCATCACAGGCTCTCGGGAGGCCCTGGCCCGCTaGAGGAGTGCAAAGATGGGGCCGGGGCCATTACAGCGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: LPPASITGSREALAR*RSAKMGPGPLQRPF
Trigger: AAAGGGACGCTGTAATGGCCCCGGCCCCATCTTTGCACTCCTGCAGCGGGCCAGGGCCTCCCGAGAGCCTGTGATGGAGGCTGGTGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CCA 90 bp TCTGACCGGGAGTTGGGGACAGCTGTGTGGCAGCACGGACCCAACTaGAGACACACCGCCAGCCTGAGCCCTGTGCCTGGTCGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: SDRELGTAVWQHGPN*RHTASLSPVPGRGC
Trigger: ACACCCACGACCAGGCACAGGGCTCAGGCTGGCGGTGTGTCTCCAGTTGGGTCCGTGCTGCCACACAGCTGTCCCCAACTCCCGGTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 90 bp TCAGCAGACCCCACTCCCTCTGACCGGGAGTTGGGGACAGCTGTGTaGCAGCACGGACCCAACTGGAGACACACCGCCAGCCTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SADPTPSDRELGTAV*QHGPNWRHTASLSP
Trigger: AGGGCTCAGGCTGGCGGTGTGTCTCCAGTTGGGTCCGTGCTGCCACACAGCTGTCCCCAACTCCCGGTCAGAGGGAGTGGGGTCTGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 90 bp CCAGGCGTCTGTACCCACACATGGGAGCACCCACATTCTCCGTGGTaGATGCCCCACTGGTGCACCCACAGCCTGCGCCTCACTCCCACC +
Preference number: 5 (lower is better)
Translates to: PGVCTHTWEHPHSPW*MPHWCTHSLRLTPT
Trigger: GGTGGGAGTGAGGCGCAGGCTGTGGGTGCACCAGTGGGGCATCCACCACGGAGAATGTGGGTGCTCCCATGTGTGGGTACAGACGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CCA 90 bp CCTCCAGGCGTCTGTACCCACACATGGGAGCACCCACATTCTCCGTaGTGGATGCCCCACTGGTGCACCCACAGCCTGCGCCTCACTCCC +
Preference number: 5 (lower is better)
Translates to: PPGVCTHTWEHPHSP*WMPHWCTHSLRLTP
Trigger: GGGAGTGAGGCGCAGGCTGTGGGTGCACCAGTGGGGCATCCACCACGGAGAATGTGGGTGCTCCCATGTGTGGGTACAGACGCCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS-3UTR CAA 90 bp AGCCCAGGCCGCCCCCGTCTCACAGCTGCAGAGCACGCAGACCACGGCACTGCACTTTATCAGCGCTTCTaGCCTGCATGGCGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: SPGRPRLTAAEHADHGTALYQRF*PAWRSA
Trigger: GGCACTGCGCCATGCAGGCAAGAAGCGCTGATAAAG...TGCAGTGCCGTGGTCTGCGTGCTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568706.1
ENST00000568834.5
CDS TCA 90 bp ACACACCAGCGTCCCCGGCTCTCGGTCCCTGCAATGTGCGGTAAGTaGGGGGAGCCGGCTGCTTCCAGCACAGCTCCAGCTCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: THQRPRLSVPAMCGK*GEPAASSTAPAPLP
Trigger: AGGAAGAGGAGCTGGAGCTGTGCTGGAAGCAGCCGGCTCCCCTCACTTACCGCACATTGCAGGGACCGAGAGCCGGGGACGCTGGTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS CCA 90 bp TGCTGCCTCGCCCCCTCTGCAACCCCCGGGACTCACCGTGCAGTGTaGGCAGGTGAAGCCGCTCATATTCTCCACGATTCCCATCACCCG +
Preference number: 5 (lower is better)
Translates to: CCLAPSATPGTHRAV*AGEAAHILHDSHHP
Trigger: CGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCACGGTGAGTCCCGGGGGTTGCAGAGGGGGCGAGGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565134.5
CDS-3UTR CAA 90 bp GCAGAAGTCCCGCGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGCTTTATCAGCGCTTCTaGCCTGCATGGCGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: AEVPRSANCVDTRLPGAQLYQRF*PAWRSA
Trigger: GGCACTGCGCCATGCAGGCAAGAAGCGCTGATAAAG...CTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCGCGGGACTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568834.5
CDS CCA 90 bp AGAGGGAGCATGCACTTCTGTAGCTGCCGGGGACTCTGTCAGGCCTaGGTCCTGACTGCCATGCTGCCATCAGTGCTGGCACCAGCGGCA +
Preference number: 5 (lower is better)
Translates to: RGSMHFCSCRGLCQA*VLTAMLPSVLAPAA
Trigger: TGCCGCTGGTGCCAGCACTGATGGCAGCATGGCAGTCAGGACCCAGGCCTGACAGAGTCCCCGGCAGCTACAGAAGTGCATGCTCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS CCA 90 bp GAGGACCAGGATGATGTGCCTGACGCCGGCCAGGTTTCCAGGCTCTaGGCGGAAACACGACAGAGAAGGTCAGGGCTCCTGGTGCCCACT +
Preference number: 5 (lower is better)
Translates to: EDQDDVPDAGQVSRL*AETRQRRSGLLVPT
Trigger: AGTGGGCACCAGGAGCCCTGACCTTCTCTGTCGTGTTTCCGCCCAGAGCCTGGAAACCTGGCCGGCGTCAGGCACATCATCCTGGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS-3UTR CAA 90 bp GTGAGTGCAGCGAAGGCGGGGCTCCCAGGGAACTCCTGGATGAAGTCGTGGCCCCTTTATCAGCGCTTCTaGCCTGCATGGCGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VSAAKAGLPGNSWMKSWPLYQRF*PAWRSA
Trigger: GGCACTGCGCCATGCAGGCAAGAAGCGCTGATAAAG...GGGCCACGACTTCATCCAGGAGTTCCCTGGGAGCCCCGCCTTCGCTGCACTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568834.5
ENST00000569898.5
CDS TCA 90 bp GGTCGTGGGTGTCATGTGCAGGTCCCCAGGAACAGGCCTGGCTGCTaGAGAGGAACATTTCCACAGGAGAGGCCGGCACGGACGCTAACC +
Preference number: 5 (lower is better)
Translates to: GRGCHVQVPRNRPGC*RGTFPQERPARTLT
Trigger: GGTTAGCGTCCGTGCCGGCCTCTCCTGTGGAAATGTTCCTCTTCAGCAGCCAGGCCTGTTCCTGGGGACCTGCACATGACACCCACGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS GCA 90 bp TACCAGAAGTGGCCCGTGCAGAGAGGGAGCATGCACTTCTGTAGCTaGCGGGGACTCTGTCAGGCCTGGGTCCTGACTGCCATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: YQKWPVQRGSMHFCS*RGLCQAWVLTAMLP
Trigger: TGGCAGCATGGCAGTCAGGACCCAGGCCTGACAGAGTCCCCGGCAGCTACAGAAGTGCATGCTCCCTCTCTGCACGGGCCACTTCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS CCA 90 bp AGGGCACGTTCAAAGGCTCCCAAGTCCAAAGCCTCCCGGAGAACCTaGCATGCAGGCGGGTCCTCAGACCTACAGAGGCTGCCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: RARSKAPKSKASRRT*HAGGSSDLQRLPEV
Trigger: GACCTCAGGCAGCCTCTGTAGGTCTGAGGACCCGCCTGCATGCCAGGTTCTCCGGGAGGCTTTGGACTTGGGAGCCTTTGAACGTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563821.1
ENST00000568287.5
ENST00000568610.2
CDS CCA 90 bp TGTGCCTGGTCGTGGGTGTCATGTGCAGGTCCCCAGGAACAGGCCTaGCTGCTGAAGAGGAACATTTCCACAGGAGAGGCCGGCACGGAC +
Preference number: 5 (lower is better)
Translates to: CAWSWVSCAGPQEQA*LLKRNISTGEAGTD
Trigger: GTCCGTGCCGGCCTCTCCTGTGGAAATGTTCCTCTTCAGCAGCCAGGCCTGTTCCTGGGGACCTGCACATGACACCCACGACCAGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 90 bp ATCAGAACACGGAGCCAGGACCCTCCAGGCGTCTGTACCCACACATaGGAGCACCCACATTCTCCGTGGTGGATGCCCCACTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: IRTRSQDPPGVCTHT*EHPHSPWWMPHWCT
Trigger: GGTGCACCAGTGGGGCATCCACCACGGAGAATGTGGGTGCTCCCATGTGTGGGTACAGACGCCTGGAGGGTCCTGGCTCCGTGTTCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS-3UTR CAA 90 bp CGCTCCGCTAACTGTGTGGACACGCGGCTGCCAGGGGCACAGGTAGGCAACATGATCAGCGCGTTTTTCTaGGGGCCTCTCCACACCACG +
Preference number: 5 (lower is better)
Translates to: RSANCVDTRLPGAQVGNMISAFF*GPLHTT
Trigger: CGTGGTGTGGAGAGGCCCCAAGAAAAACGCGCTGAT...CATGTTGCCTACCTGTGCCCCTGGCAGCCGCGTGTCCACACAGTTAGCGGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262302.14
CDS-3UTR CAA 90 bp TTAAAAGCTCCCCCAACTCCACGACTCAGGCCCTCCGAGATCACGGAGCTTCCAGACAGGGTCTCGCTCTaGCCCGGGCTGCGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: LKAPPTPRLRPSEITELPDRVSL*PGLRCS
Trigger: ACTGCACCGCAGCCCGGGCAAGAGCGAGACCCTGTC...TGGAAGCTCCGTGATCTCGGAGGGCCTGAGTCGTGGAGTTGGGGGAGCTTTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS CCA 90 bp GGCGGCGCTGCTGAGAGTGGAAACTGCCCAACTCCTCTCGCTGTGTaGAAGGGTGCATGCGTTCCTTCGTGCGCGTGTGCAAACACACAC +
Preference number: 5 (lower is better)
Translates to: GGAAESGNCPTPLAV*KGACVPSCACANTH
Trigger: GTGTGTGTTTGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACAGCGAGAGGAGTTGGGCAGTTTCCACTCTCAGCAGCGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS TCA 90 bp ACTGAGGCAGCTCCTAAGCAGATTGTCAGCAAAGCACAGTCAGCATaGGCCTGCCGGGTGGGGCAGTGGGGCTGGAAGTGCAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: TEAAPKQIVSKAQSA*ACRVGQWGWKCRKE
Trigger: CTCCTTCCTGCACTTCCAGCCCCACTGCCCCACCCGGCAGGCTCATGCTGACTGTGCTTTGCTGACAATCTGCTTAGGAGCTGCCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS CCA 90 bp CCAGGGGCTCTCCTCGTTGGCAGAGGTGGGGGAATGGTGCCTGTCTaGTGTGTTGGGCTGAGCACCATGGTAAATGCAGGCCTTAGTGTC +
Preference number: 5 (lower is better)
Translates to: PGALLVGRGGGMVPV*CVGLSTMVNAGLSV
Trigger: GACACTAAGGCCTGCATTTACCATGGTGCTCAGCCCAACACACCAGACAGGCACCATTCCCCCACCTCTGCCAACGAGGAGAGCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS GCA 90 bp TCCTCTCGCTGTGTGGAAGGGTGCATGCGTTCCTTCGTGCGCGTGTaGAAACACACACGTGGGTCACATGATCATGAAACTGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SSRCVEGCMRSFVRV*KHTRGSHDHETASP
Trigger: GGGGCTGGCAGTTTCATGATCATGTGACCCACGTGTGTGTTTGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACAGCGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS GCA 90 bp GAGAGTGGAAACTGCCCAACTCCTCTCGCTGTGTGGAAGGGTGCATaGGTTCCTTCGTGCGCGTGTGCAAACACACACGTGGGTCACATG +
Preference number: 5 (lower is better)
Translates to: ESGNCPTPLAVWKGA*VPSCACANTHVGHM
Trigger: CATGTGACCCACGTGTGTGTTTGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACAGCGAGAGGAGTTGGGCAGTTTCCACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS CCA 90 bp GGAGGCGAAGCACCATCTCCCCGAGGAAGGCGAGTGCGCTCTCCATaGACAATGAGTCCCGGTCAGCTTTATGGGTTAGCAAATCCAGAT +
Preference number: 5 (lower is better)
Translates to: GGEAPSPRGRRVRSP*TMSPGQLYGLANPD
Trigger: ATCTGGATTTGCTAACCCATAAAGCTGACCGGGACTCATTGTCCATGGAGAGCGCACTCGCCTTCCTCGGGGAGATGGTGCTTCGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS-3UTR CAA 90 bp CGGCCAGGTTTCCAGGCTACTTTTCTGAACACTGAGAGCGCCACTTCCACAAAGAGGATTCCCACCTTCTaGCCTGCATGGCGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: RPGFQATFLNTESATSTKRIPTF*PAWRSA
Trigger: GGCACTGCGCCATGCAGGCAAGAAGGTGGGAATCCT...CTTTGTGGAAGTGGCGCTCTCAGTGTTCAGAAAAGTAGCCTGGAAACCTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS GCA 90 bp TGCCCAACTCCTCTCGCTGTGTGGAAGGGTGCATGCGTTCCTTCGTaGGCGTGTGCAAACACACACGTGGGTCACATGATCATGAAACTG +
Preference number: 5 (lower is better)
Translates to: CPTPLAVWKGACVPS*ACANTHVGHMIMKL
Trigger: CAGTTTCATGATCATGTGACCCACGTGTGTGTTTGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACAGCGAGAGGAGTTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS-3UTR CAA 90 bp CGGCCAGGTTTCCAGGCTACTTTTCTGAACACTGAGAGCGCCACTTCCACAAAGATCAGCGCGTTTTTCTaGGGGCCTCTCCACACCACG +
Preference number: 5 (lower is better)
Translates to: RPGFQATFLNTESATSTKISAFF*GPLHTT
Trigger: CGTGGTGTGGAGAGGCCCCAAGAAAAACGCGCTGAT...CTTTGTGGAAGTGGCGCTCTCAGTGTTCAGAAAAGTAGCCTGGAAACCTGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564227.5
CDS CCA 90 bp AGGGGTTCTGACTTAAATTACTTCAACACCAAGAGGTACCAGAAGTaGCCCGTGCAGAGAGGGAGCATGCACTTCTGTAGCTGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: RGSDLNYFNTKRYQK*PVQRGSMHFCSCRG
Trigger: TCCCCGGCAGCTACAGAAGTGCATGCTCCCTCTCTGCACGGGCCACTTCTGGTACCTCTTGGTGTTGAAGTAATTTAAGTCAGAACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS TCA 90 bp TTCGTAGAGACTGTTTCTCTATGTTGGCCATGCTGGTCTCAAATCTaGCCTCAAGTGATCTGCCCGCCTCGGCCAACATGGCGAAACCCT +
Preference number: 5 (lower is better)
Translates to: FVETVSLCWPCWSQI*PQVICPPRPTWRNP
Trigger: AGGGTTTCGCCATGTTGGCCGAGGCGGGCAGATCACTTGAGGTCAGATTTGAGACCAGCATGGCCAACATAGAGAAACAGTCTCTACGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568610.2
CDS GCA 72 bp GCCGCCTCCATCCCGCCGCCTCCAGGAGCTCGCGGCTaGAGTCCGCTTACGCCCGCGGGCCGTCAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: AASIPPPPGARG*SPLTPAGRQPP
Trigger: GGGAGGCTGACGGCCCGCGGGCGTAAGCGGACTGCAGCCGCGAGCTCCTGGAGGCGGCGGGATGGAGGCGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262302.14
ENST00000566090.5
ENST00000566447.5
ENST00000567700.5
ENST00000568834.5
CDS CCA 72 bp CCCCGGCGAGCTGGGCCAGCTCCTCTCCGCCGCCCCTaGAGAAGACGCTGGTGCACTCCTAGGAGACGGTGG +
Preference number: 6 (lower is better)
Translates to: PRRAGPAPLRRP*RRRWCTPRRRW
Trigger: CCACCGTCTCCTAGGAGTGCACCAGCGTCTTCTCCAGGGGCGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565134.5
CDS GCA 72 bp GGCGGTCAGGGCAGGGCAGGTCTGCACACGTGGCCCTaGGCCACTAAGAACCAGCCAGGTCAGGCCGAGGGG +
Preference number: 6 (lower is better)
Translates to: GGQGRAGLHTWP*ATKNQPGQAEG
Trigger: CCCCTCGGCCTGACCTGGCTGGTTCTTAGTGGCGCAGGGCCACGTGTGCAGACCTGCCCTGCCCTGACCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS GCA 72 bp GACGGGGCAGACGGGGCGGTCAGGGCAGGGCAGGTCTaGACACGTGGCCCTGCGCCACTAAGAACCAGCCAG +
Preference number: 6 (lower is better)
Translates to: DGADGAVRAGQV*TRGPAPLRTSQ
Trigger: CTGGCTGGTTCTTAGTGGCGCAGGGCCACGTGTGCAGACCTGCCCTGCCCTGACCGCCCCGTCTGCCCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CCA 72 bp TGCCACCAGCCTCCATCACAGGCTCTCGGGAGGCCCTaGCCCGCTGCAGGAGTGCAAAGATGGGGCCGGGGC +
Preference number: 6 (lower is better)
Translates to: CHQPPSQALGRP*PAAGVQRWGRG
Trigger: GCCCCGGCCCCATCTTTGCACTCCTGCAGCGGGCCAGGGCCTCCCGAGAGCCTGTGATGGAGGCTGGTGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CAA 72 bp GACGGCGGACGCGCCGCCCGGCCGTTACCGTTTTTCTaGGGGCCTCTCCACACCACGGCCTCGTCCGGCTTC +
Preference number: 6 (lower is better)
Translates to: DGGRAARPLPFF*GPLHTTASSGF
Trigger: GAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCCCAAGAAAAACGGTAACGGCCGGGCGGCGCGTCCGCCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566090.5
ENST00000566447.5
ENST00000567700.5
CDS CAA 90 bp AGCTGCCCGGGGCTCCGCCCAGTGAGGGGTAGGGCGCTCACCTTCTaGCCTGCATGGCGCAGTGCCAGGGCCAGCTCCGTGGAGATGGTG +
Preference number: 6 (lower is better)
Translates to: SCPGLRPVRGRALTF*PAWRSARASSVEMV
Trigger: CACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGAGCGCCCTACCCCTCACTGGGCGGAGCCCCGGGCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563821.1
ENST00000565603.5
ENST00000567700.5
CDS CAA 90 bp CTTCACCAGGACGGCGGACGCGCCGCCCGGCCGTTACCGTTTTTCTaGGGGCCTCTCCACACCACGGCCTCGTCCGGCTTCTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LHQDGGRAARPLPFF*GPLHTTASSGFSSR
Trigger: CCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGGCCCCAAGAAAAACGGTAACGGCCGGGCGGCGCGTCCGCCGTCCTGGTGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566090.5
ENST00000566447.5
ENST00000567700.5
CDS CCA 72 bp AGACGGGGCGGTCAGGGCAGGGCAGGTCTGCACACGTaGCCCTGCGCCACTAAGAACCAGCCAGGTCAGGCC +
Preference number: 6 (lower is better)
Translates to: RRGGQGRAGLHT*PCATKNQPGQA
Trigger: GGCCTGACCTGGCTGGTTCTTAGTGGCGCAGGGCCACGTGTGCAGACCTGCCCTGCCCTGACCGCCCCGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CAA 90 bp GGCCAGGTTTCCAGGCTCCCGGCGCCACCGCTGAGGCCATGCCCCTaGTCTCCAGCAAGCTGCTCCATCCCCGACAGGTCCTTGGAGGGT +
Preference number: 6 (lower is better)
Translates to: GQVSRLPAPPLRPCP*SPASCSIPDRSLEG
Trigger: ACCCTCCAAGGACCTGTCGGGGATGGAGCAGCTTGCTGGAGACAAGGGGCATGGCCTCAGCGGTGGCGCCGGGAGCCTGGAAACCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568287.5
CDS GCA 72 bp CCCTGCATTCTCACCCCGGCGCCACCGCTGAGGCCATaGCCCTTGTCTCCAGCAAGCTGCTCCATCCCCGAC +
Preference number: 6 (lower is better)
Translates to: PCILTPAPPLRP*PLSPASCSIPD
Trigger: GTCGGGGATGGAGCAGCTTGCTGGAGACAAGGGGCATGGCCTCAGCGGTGGCGCCGGGGTGAGAATGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS GCA 72 bp CAGGTTTCCAGGCTCCCGGCGCCACCGCTGAGGCCATaGCCCTTGTCTCCAGCAAGCTGCTCCATCCCCGAC +
Preference number: 6 (lower is better)
Translates to: QVSRLPAPPLRP*PLSPASCSIPD
Trigger: GTCGGGGATGGAGCAGCTTGCTGGAGACAAGGGGCATGGCCTCAGCGGTGGCGCCGGGAGCCTGGAAACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568287.5
CDS GCA 72 bp GCCTCCATCACAGGCTCTCGGGAGGCCCTGGCCCGCTaGAGGAGTGCAAAGATGGGGCCGGGGCCATTACAG +
Preference number: 6 (lower is better)
Translates to: ASITGSREALAR*RSAKMGPGPLQ
Trigger: CTGTAATGGCCCCGGCCCCATCTTTGCACTCCTGCAGCGGGCCAGGGCCTCCCGAGAGCCTGTGATGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CAA 72 bp AGCAGAGGGCCCAGGGTGGGTGGCAACAACCACGCGTaGTCACACACCAGCGTCCCCGGCTCTCGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: SRGPRVGGNNHA*SHTSVPGSRSL
Trigger: CAGGGACCGAGAGCCGGGGACGCTGGTGTGTGACAACGCGTGGTTGTTGCCACCCACCCTGGGCCCTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS CAA 90 bp CCTGGTGCCCACTGTGCCCACACACGCGGGGTCACCCACTGCCTCTaGCACCCACGTTCTGAGCGGGGCAGTGGTGAATCGCCAGACCCA +
Preference number: 6 (lower is better)
Translates to: PGAHCAHTRGVTHCL*HPRSERGSGESPDP
Trigger: TGGGTCTGGCGATTCACCACTGCCCCGCTCAGAACGTGGGTGCAAGAGGCAGTGGGTGACCCCGCGTGTGTGGGCACAGTGGGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS TCA 72 bp CGTCCCCGGCTCTCGGTCCCTGCAATGTGCGGTAAGTaGGGGGAGCCGGCTGCTTCCAGCACAGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: RPRLSVPAMCGK*GEPAASSTAPA
Trigger: AGCTGGAGCTGTGCTGGAAGCAGCCGGCTCCCCTCACTTACCGCACATTGCAGGGACCGAGAGCCGGGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS TCA 72 bp GGCAGCACGGACCCAACTGGAGACACACCGCCAGCCTaGGCCCTGTGCCTGGTCGTGGGTGTCATGTGCAGG +
Preference number: 6 (lower is better)
Translates to: GSTDPTGDTPPA*ALCLVVGVMCR
Trigger: CCTGCACATGACACCCACGACCAGGCACAGGGCTCAGGCTGGCGGTGTGTCTCCAGTTGGGTCCGTGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 72 bp CCAGTGAGGGGTAGGGCGCTCACCTTCTTGCCTGCATaGCGCAGTGCCAGGGCCAGCTCCGTGGAGATGGTG +
Preference number: 6 (lower is better)
Translates to: PVRGRALTFLPA*RSARASSVEMV
Trigger: CACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGTGAGCGCCCTACCCCTCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563821.1
ENST00000565603.5
ENST00000567700.5
CDS CCA 72 bp GAGACACACCGCCAGCCTGAGCCCTGTGCCTGGTCGTaGGTGTCATGTGCAGGTCCCCAGGAACAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: ETHRQPEPCAWS*VSCAGPQEQAW
Trigger: CCAGGCCTGTTCCTGGGGACCTGCACATGACACCCACGACCAGGCACAGGGCTCAGGCTGGCGGTGTGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 72 bp CCCACTCCCTCTGACCGGGAGTTGGGGACAGCTGTGTaGCAGCACGGACCCAACTGGAGACACACCGCCAGC +
Preference number: 6 (lower is better)
Translates to: PTPSDRELGTAV*QHGPNWRHTAS
Trigger: GCTGGCGGTGTGTCTCCAGTTGGGTCCGTGCTGCCACACAGCTGTCCCCAACTCCCGGTCAGAGGGAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 72 bp CTCGGGAGGCCCTGGCCCGCTGCAGGAGTGCAAAGATaGGGCCGGGGCCATTACAGCGTCCCTTTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: LGRPWPAAGVQR*GRGHYSVPFCS
Trigger: ACTGCAGAAAGGGACGCTGTAATGGCCCCGGCCCCATCTTTGCACTCCTGCAGCGGGCCAGGGCCTCCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CAA 72 bp GGTCAGGCCGAGGGGCTGCAGTCCATCAGGTGTCACTaGCCACCAGCCTCCATCACAGGCTCTCGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: GQAEGLQSIRCH*PPASITGSREA
Trigger: GGCCTCCCGAGAGCCTGTGATGGAGGCTGGTGGCAAGTGACACCTGATGGACTGCAGCCCCTCGGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS GCA 72 bp CCTGGCATGCAGGCGGGTCCTCAGACCTACAGAGGCTaGCTGAGGTCTCCTCCAGGGGACGCGGAAAAGGCA +
Preference number: 6 (lower is better)
Translates to: PGMQAGPQTYRG*LRSPPGDAEKA
Trigger: TGCCTTTTCCGCGTCCCCTGGAGGAGACCTCAGGCAGCCTCTGTAGGTCTGAGGACCCGCCTGCATGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563821.1
ENST00000568287.5
ENST00000568610.2
CDS GCA 72 bp ACTGTGCCCACACACGCGGGGTCACCCACTGCCTCTTaGACCCACGTTCTGAGCGGGGCAGTGGTGAATCGC +
Preference number: 6 (lower is better)
Translates to: TVPTHAGSPTAS*THVLSGAVVNR
Trigger: GCGATTCACCACTGCCCCGCTCAGAACGTGGGTGCAAGAGGCAGTGGGTGACCCCGCGTGTGTGGGCACAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS GCA 72 bp CACGACAGAGAAGGTCAGGGCTCCTGGTGCCCACTGTaGCCACACACGCGGGGTCACCCACTGCCTCTTGCA +
Preference number: 6 (lower is better)
Translates to: HDREGQGSWCPL*PHTRGHPLPLA
Trigger: TGCAAGAGGCAGTGGGTGACCCCGCGTGTGTGGGCACAGTGGGCACCAGGAGCCCTGACCTTCTCTGTCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS GCA 72 bp AGCCTCTCCCTGCCTTTGGGGGCGTCTAATGCCACCTaGTCCAGAGGCACCAGAACCCCCTCAGCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: SLSLPLGASNAT*SRGTRTPSALP
Trigger: GGGCAGAGCTGAGGGGGTTCTGGTGCCTCTGGAGCAGGTGGCATTAGACGCCCCCAAAGGCAGGGAGAGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS GCA 72 bp CCCACACATGGGAGCACCCACATTCTCCGTGGTGGATaGCCCACTGGTGCACCCACAGCCTGCGCCTCACTC +
Preference number: 6 (lower is better)
Translates to: PTHGSTHILRGG*PTGAPTACASL
Trigger: GAGTGAGGCGCAGGCTGTGGGTGCACCAGTGGGGCATCCACCACGGAGAATGTGGGTGCTCCCATGTGTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS GCA 72 bp CCAGGCCACGTCGGACACAAACTGCTTTATCAGCGCTaGAAAGACGGGGCAGACGGGGCGGTCAGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PGHVGHKLLYQR*KDGADGAVRAG
Trigger: CCCTGCCCTGACCGCCCCGTCTGCCCCGTCTTTGCAGCGCTGATAAAGCAGTTTGTGTCCGACGTGGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CCA 72 bp TCTGGGCGGAAACACGACAGAGAAGGTCAGGGCTCCTaGTGCCCACTGTGCCCACACACGCGGGGTCACCCA +
Preference number: 6 (lower is better)
Translates to: SGRKHDREGQGS*CPLCPHTRGHP
Trigger: TGGGTGACCCCGCGTGTGTGGGCACAGTGGGCACCAGGAGCCCTGACCTTCTCTGTCGTGTTTCCGCCCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS CCA 72 bp GAGTTGGGGACAGCTGTGTGGCAGCACGGACCCAACTaGAGACACACCGCCAGCCTGAGCCCTGTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: ELGTAVWQHGPN*RHTASLSPVPG
Trigger: ACCAGGCACAGGGCTCAGGCTGGCGGTGTGTCTCCAGTTGGGTCCGTGCTGCCACACAGCTGTCCCCAACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 72 bp CGGAGCCAGGACCCTCCAGGCGTCTGTACCCACACATaGGAGCACCCACATTCTCCGTGGTGGATGCCCCAC +
Preference number: 6 (lower is better)
Translates to: RSQDPPGVCTHT*EHPHSPWWMPH
Trigger: GTGGGGCATCCACCACGGAGAATGTGGGTGCTCCCATGTGTGGGTACAGACGCCTGGAGGGTCCTGGCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CAA 72 bp CACTGTGCCCACACACGCGGGGTCACCCACTGCCTCTaGCACCCACGTTCTGAGCGGGGCAGTGGTGAATCG +
Preference number: 6 (lower is better)
Translates to: HCAHTRGVTHCL*HPRSERGSGES
Trigger: CGATTCACCACTGCCCCGCTCAGAACGTGGGTGCAAGAGGCAGTGGGTGACCCCGCGTGTGTGGGCACAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTACGGCCGCCGCCTCCATCCCG +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSTAAASIP
Trigger: CGGGATGGAGGCGGCGGCCGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565987.5
CDS GCA 72 bp AAGGAGCGGCACAGCCTTCTTGCCTGCATGGCGCAGTaGCAGGGCCAGCTCCGTGGAGATGGTGCTTTTCCC +
Preference number: 6 (lower is better)
Translates to: KERHSLLACMAQ*QGQLRGDGAFP
Trigger: GGGAAAAGCACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGGCTGTGCCGCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563136.5
ENST00000566447.5
CDS GCA 72 bp CTGGGGCCACACAGGTCCACATCCAGGATTCCCACCTaGAAGGAGCGGCACAGCCTTCTTGCCTGCATGGCG +
Preference number: 6 (lower is better)
Translates to: LGPHRSTSRIPT*KERHSLLACMA
Trigger: CGCCATGCAGGCAAGAAGGCTGTGCCGCTCCTTGCAGGTGGGAATCCTGGATGTGGACCTGTGTGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563136.5
ENST00000566447.5
CDS CCA 72 bp GCCCCCTCTGCAACCCCCGGGACTCACCGTGCAGTGTaGGCAGGTGAAGCCGCTCATATTCTCCACGATTCC +
Preference number: 6 (lower is better)
Translates to: APSATPGTHRAV*AGEAAHILHDS
Trigger: GGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCACGGTGAGTCCCGGGGGTTGCAGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565134.5
CDS CCA 72 bp CAACTGGAGACACACCGCCAGCCTGAGCCCTGTGCCTaGTCGTGGGTGTCATGTGCAGGTCCCCAGGAACAG +
Preference number: 6 (lower is better)
Translates to: QLETHRQPEPCA*SWVSCAGPQEQ
Trigger: CTGTTCCTGGGGACCTGCACATGACACCCACGACCAGGCACAGGGCTCAGGCTGGCGGTGTGTCTCCAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS CCA 72 bp TGTACCCACACATGGGAGCACCCACATTCTCCGTGGTaGATGCCCCACTGGTGCACCCACAGCCTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: CTHTWEHPHSPW*MPHWCTHSLRL
Trigger: GAGGCGCAGGCTGTGGGTGCACCAGTGGGGCATCCACCACGGAGAATGTGGGTGCTCCCATGTGTGGGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CCA 72 bp GTCTGTACCCACACATGGGAGCACCCACATTCTCCGTaGTGGATGCCCCACTGGTGCACCCACAGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: VCTHTWEHPHSP*WMPHWCTHSLR
Trigger: GCGCAGGCTGTGGGTGCACCAGTGGGGCATCCACCACGGAGAATGTGGGTGCTCCCATGTGTGGGTACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567700.5
CDS CCA 72 bp GATGATGTGCCTGACGCCGGCCAGGTTTCCAGGCTCTaGGCGGAAACACGACAGAGAAGGTCAGGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: DDVPDAGQVSRL*AETRQRRSGLL
Trigger: CAGGAGCCCTGACCTTCTCTGTCGTGTTTCCGCCCAGAGCCTGGAAACCTGGCCGGCGTCAGGCACATCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS TCA 72 bp TGCAACCCCCGGGACTCACCGTGCAGTGTGGGCAGGTaGAGCCGCTCATATTCTCCACGATTCCCATCACCC +
Preference number: 6 (lower is better)
Translates to: CNPRDSPCSVGR*SRSYSPRFPSP
Trigger: GGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCACGGTGAGTCCCGGGGGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565134.5
CDS GCA 72 bp AGAGGTACCAGAAGTGGCCCGTGCAGAGAGGGAGCATaGACTTCTGTAGCTGCCGGGGACTCTGTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: RGTRSGPCREGA*TSVAAGDSVRP
Trigger: AGGCCTGACAGAGTCCCCGGCAGCTACAGAAGTGCATGCTCCCTCTCTGCACGGGCCACTTCTGGTACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS CCA 72 bp ATGCACTTCTGTAGCTGCCGGGGACTCTGTCAGGCCTaGGTCCTGACTGCCATGCTGCCATCAGTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: MHFCSCRGLCQA*VLTAMLPSVLA
Trigger: TGCCAGCACTGATGGCAGCATGGCAGTCAGGACCCAGGCCTGACAGAGTCCCCGGCAGCTACAGAAGTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS CCA 72 bp TCAAAGGCTCCCAAGTCCAAAGCCTCCCGGAGAACCTaGCATGCAGGCGGGTCCTCAGACCTACAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SKAPKSKASRRT*HAGGSSDLQRL
Trigger: CAGCCTCTGTAGGTCTGAGGACCCGCCTGCATGCCAGGTTCTCCGGGAGGCTTTGGACTTGGGAGCCTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563821.1
ENST00000568287.5
ENST00000568610.2
CDS GCA 72 bp ACTGCTTTATCAGCGCTTCTTGCCTGCATGGCGCAGTaGCAGGGCCAGCTCCGTGGAGATGGTGCTTTTCCC +
Preference number: 6 (lower is better)
Translates to: TALSALLACMAQ*QGQLRGDGAFP
Trigger: GGGAAAAGCACCATCTCCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAGCGCTGATAAAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568706.1
ENST00000568834.5
ENST00000569898.5
CDS CCA 72 bp CTCCTCGTTGGCAGAGGTGGGGGAATGGTGCCTGTCTaGTGTGTTGGGCTGAGCACCATGGTAAATGCAGGC +
Preference number: 6 (lower is better)
Translates to: LLVGRGGGMVPV*CVGLSTMVNAG
Trigger: GCCTGCATTTACCATGGTGCTCAGCCCAACACACCAGACAGGCACCATTCCCCCACCTCTGCCAACGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS CCA 72 bp TGTCTCCAGCAAGCTGCTCCATCCCCGACAGGTCCTTaGAGGGTGCATGTGAGGGGCTCAACACATGATGCG +
Preference number: 6 (lower is better)
Translates to: CLQQAAPSPTGP*RVHVRGSTHDA
Trigger: CGCATCATGTGTTGAGCCCCTCACATGCACCCTCCAAGGACCTGTCGGGGATGGAGCAGCTTGCTGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563821.1
ENST00000568287.5
ENST00000568610.2
CDS CCA 72 bp GCTGAGAGTGGAAACTGCCCAACTCCTCTCGCTGTGTaGAAGGGTGCATGCGTTCCTTCGTGCGCGTGTGCA +
Preference number: 6 (lower is better)
Translates to: AESGNCPTPLAV*KGACVPSCACA
Trigger: TGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACAGCGAGAGGAGTTGGGCAGTTTCCACTCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS CCA 72 bp TCGTGGGTGTCATGTGCAGGTCCCCAGGAACAGGCCTaGCTGCTGAAGAGGAACATTTCCACAGGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: SWVSCAGPQEQA*LLKRNISTGEA
Trigger: GGCCTCTCCTGTGGAAATGTTCCTCTTCAGCAGCCAGGCCTGTTCCTGGGGACCTGCACATGACACCCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566090.5
ENST00000567700.5
CDS GCA 72 bp CCTCTCGCTGTGTGGAAGGGTGCATGCGTTCCTTCGTaGGCGTGTGCAAACACACACGTGGGTCACATGATC +
Preference number: 6 (lower is better)
Translates to: PLAVWKGACVPS*ACANTHVGHMI
Trigger: GATCATGTGACCCACGTGTGTGTTTGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACAGCGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS GCA 72 bp AACTGCCCAACTCCTCTCGCTGTGTGGAAGGGTGCATaGGTTCCTTCGTGCGCGTGTGCAAACACACACGTG +
Preference number: 6 (lower is better)
Translates to: NCPTPLAVWKGA*VPSCACANTHV
Trigger: CACGTGTGTGTTTGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACAGCGAGAGGAGTTGGGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS CCA 72 bp GCACCATCTCCCCGAGGAAGGCGAGTGCGCTCTCCATaGACAATGAGTCCCGGTCAGCTTTATGGGTTAGCA +
Preference number: 6 (lower is better)
Translates to: APSPRGRRVRSP*TMSPGQLYGLA
Trigger: TGCTAACCCATAAAGCTGACCGGGACTCATTGTCCATGGAGAGCGCACTCGCCTTCCTCGGGGAGATGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2
CDS GCA 72 bp TGGAAACTGCCCAACTCCTCTCGCTGTGTGGAAGGGTaGATGCGTTCCTTCGTGCGCGTGTGCAAACACACA +
Preference number: 6 (lower is better)
Translates to: WKLPNSSRCVEG*MRSFVRVCKHT
Trigger: TGTGTGTTTGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACAGCGAGAGGAGTTGGGCAGTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS TCA 72 bp ACTGTTTCTCTATGTTGGCCATGCTGGTCTCAAATCTaGCCTCAAGTGATCTGCCCGCCTCGGCCAACATGG +
Preference number: 6 (lower is better)
Translates to: TVSLCWPCWSQI*PQVICPPRPTW
Trigger: CCATGTTGGCCGAGGCGGGCAGATCACTTGAGGTCAGATTTGAGACCAGCATGGCCAACATAGAGAAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568610.2
CDS GCA 72 bp TGTGTGGAAGGGTGCATGCGTTCCTTCGTGCGCGTGTaGAAACACACACGTGGGTCACATGATCATGAAACT +
Preference number: 6 (lower is better)
Translates to: CVEGCMRSFVRV*KHTRGSHDHET
Trigger: AGTTTCATGATCATGTGACCCACGTGTGTGTTTGCACACGCGCACGAAGGAACGCATGCACCCTTCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563821.1
CDS CAA 90 bp AAGAACATTTCACTTCTCAGCAAACTGAGGCAGCTCCTAAGCAGATaGTCAGCAAAGCACAGTCAGCATGAGCCTGCCGGGTGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: KNISLLSKLRQLLSR*SAKHSQHEPAGWGS
Trigger: ACTGCCCCACCCGGCAGGCTCATGCTGACTGTGCTTTGCTGACAATCTGCTTAGGAGCTGCCTCAGTTTGCTGAGAAGTGAAATGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563821.1
ENST00000568610.2