RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUAK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163545

Ensembl transcript IDs: ENST00000367157.6

Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGGAATGTGTGTGTAAAGAGGTCTGGCCCCACTTGGGCAGGGAATaGGTAGGGAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAG +
Preference number: 1 (lower is better)
Translates to: RECVCKEVWPHLGRE*VGKELSLEGTMCTE
Trigger: CTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTCCCTACTCATTCCCTGCCCAAGTGGGGCCAGACCTCTTTACACACACATTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR GCA 90 bp TCAGCAGGGCTGAAGACAGACACTGAACCCTTGGCGCATTTCATTTaGCTACTTCCCATATCCAGCCCTGCTCAGGGCTCCACTGCAAAC +
Preference number: 1 (lower is better)
Translates to: SAGLKTDTEPLAHFI*LLPISSPAQGSTAN
Trigger: GTTTGCAGTGGAGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR CCA 90 bp GGGAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATaGGATGCAGGAGATGGGCCCTGGGAGAGTTCTCTTTCCAGGTCT +
Preference number: 1 (lower is better)
Translates to: GKELSLEGTMCTEYS*DAGDGPWESSLSRS
Trigger: AGACCTGGAAAGAGAACTCTCCCAGGGCCCATCTCCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR TCA 90 bp CTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTGAAGACAGACACTaGACCCTTGGCGCATTTCATTTGCCTACTTCCCATATCCAGCCC +
Preference number: 1 (lower is better)
Translates to: LSLVSSSFSRAEDRH*TLGAFHLPTSHIQP
Trigger: GGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR TCA 90 bp CATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTaGAGACAGACACTGAACCCTTGGCGCATTTCATTTGCCTACTTC +
Preference number: 1 (lower is better)
Translates to: HSRSPLFSILFVQQG*RQTLNPWRISFAYF
Trigger: GAAGTAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR TCA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCTGCATCTGAGAGCCTaGCCGGGCTGGGGCAATGCC +
Preference number: 2 (lower is better)
Translates to: RYSRPFPGCLMHIRGATILHLRA*PGWGNA
Trigger: GGCATTGCCCCAGCCCGGTCAGGCTCTCAGATGCAG...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR TCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGGCAACCAGCTGCATCTaGGAGCCTGACCGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQATSCI*EPDRAG
Trigger: CCCAGCCCGGTCAGGCTCTCAGATGCAGCTGGTTGC...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR CCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTGCAGGAGATGGGCCCTaGGAGAGTTCTCTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSAGDGP*ESSLSR
Trigger: CCTGGAAAGAGAACTCTCCCAGGGCCCATCTCCTGC...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR GCA 90 bp CGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTCCACTGCAACATCTCCCCTCGGGGTaGAACCAGCTGCATCTGAGA +
Preference number: 2 (lower is better)
Translates to: RISFAYFPYPALLRAPLQHLPSG*NQLHLR
Trigger: TCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATG...TTGCAGTGGAGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR GCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTTGCTCAGGGCTCCACTaGAAACCCTCTCAGCCTTCT +
Preference number: 2 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSCSGLH*KPSQPS
Trigger: AGAAGGCTGAGAGGGTTTGCAGTGGAGCCCTGAGCA...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR TCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGACCCTCTCAGCCTTCTaGGCTGGGATGCAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: TLEQLRGRSSESLRSKVETLSAF*AGMQVL
Trigger: CAGGACCTGCATCCCAGCTCAGAAGGCTGAGAGGGT...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR TCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGGGAGGCTGGGCCCCTTaGGATGAAGTCCACACAGCA +
Preference number: 2 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEGGWAP*DEVHTA
Trigger: TGCTGTGTGGACTTCATCTCAAGGGGCCCAGCCTCC...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR CCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGAGTGTGTAAAGAGGTCTaGCCCCACTTGGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: QLRGRSSESLRSKVESRGVCKEV*PHLGRE
Trigger: TTCCCTGCCCAAGTGGGGCCAGACCTCTTTACACAC...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR CCA 90 bp ACAGGCAATGTGGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCCAGACACTGAACCCTTaGCGCATTTCATTTGCCTAC +
Preference number: 2 (lower is better)
Translates to: TGNVDSVAGIPVPLSLVSQTLNP*RISFAY
Trigger: GTAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTG...GGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCCACATTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR CCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGAAAGAAACAGGCAATGTaGACTCTGTCGCGGGCATTC +
Preference number: 2 (lower is better)
Translates to: QLRGRSSESLRSKVESRGKKQAM*TLSRAF
Trigger: GAATGCCCGCGACAGAGTCCACATTGCCTGTTTCTT...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR GCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGATTGGCGCATTTCATTTaGCTACTTCCCATATCCAGC +
Preference number: 2 (lower is better)
Translates to: QLRGRSSESLRSKVESRGLAHFI*LLPISS
Trigger: GCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAA...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR CCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGACCATCCAGTTCTGGTaGTTGGTAGGAACGGGAATG +
Preference number: 2 (lower is better)
Translates to: TLEQLRGRSSESLRSKVETIQFW*LVGTGM
Trigger: CATTCCCGTTCCTACCAACCACCAGAACTGGATGGT...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR GCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGAGACCATTCCCAGGATaGCTCATGCACATTAGGGGT +
Preference number: 2 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGARPFPG*LMHIRG
Trigger: ACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCT...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR GCA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTTCCCATATCCAGCCCTaGTCAGGGCTCCACTGCAAA +
Preference number: 2 (lower is better)
Translates to: IKITKRYSRPFPGCLMHISHIQP*SGLHCK
Trigger: TTTGCAGTGGAGCCCTGAGCAGGGCTGGATATGGGA...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR TCA 72 bp GTGTGTAAAGAGGTCTGGCCCCACTTGGGCAGGGAATaGGTAGGGAAGGAGCTGTCCTTAGAAGGCACCATG +
Preference number: 3 (lower is better)
Translates to: VCKEVWPHLGRE*VGKELSLEGTM
Trigger: CATGGTGCCTTCTAAGGACAGCTCCTTCCCTACTCATTCCCTGCCCAAGTGGGGCCAGACCTCTTTACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR GCA 72 bp GGCGCATTTCATTTGCCTACTTCCCATATCCAGCCCTaGTCAGGGCTCCACTGCAAACCCTCTCAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: GAFHLPTSHIQP*SGLHCKPSQPS
Trigger: AGAAGGCTGAGAGGGTTTGCAGTGGAGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR GCA 72 bp CTGAAGACAGACACTGAACCCTTGGCGCATTTCATTTaGCTACTTCCCATATCCAGCCCTGCTCAGGGCTCC +
Preference number: 3 (lower is better)
Translates to: LKTDTEPLAHFI*LLPISSPAQGS
Trigger: GGAGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR CAA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGACAGACACTGAACCCTaGGCGCATTTCATTTGCCTA +
Preference number: 3 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQTDTEP*AHFICL
Trigger: TAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTGT...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR GCA 72 bp AAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATaGCTCATGCACATTAGGGGTGCCACCATCCAGTTC +
Preference number: 3 (lower is better)
Translates to: KITKRYSRPFPG*LMHIRGATIQF
Trigger: GAACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR TCA 72 bp TCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTaGAGACAGACACTGAACCCTTGGCGCATTTCATTT +
Preference number: 3 (lower is better)
Translates to: SPLFSILFVQQG*RQTLNPWRISF
Trigger: AAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR CAA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTTGAAGAAACAGAGATaGTGTTCTCTTACTCCTAGG +
Preference number: 3 (lower is better)
Translates to: TLEQLRGRSSESLRSKVELKKQR*CSLTPR
Trigger: CCTAGGAGTAAGAGAACACAATCTCTGTTTCTTCAA...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR-3UTR CAA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTCTTGGCGCATTTCATTaGCCTACTTCCCATATCCAG +
Preference number: 3 (lower is better)
Translates to: IKITKRYSRPFPGCLMHILGAFH*PTSHIQ
Trigger: CTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAG...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGGGAGCCAGTCAGCCATaGAGGCGCGGGCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: EKASPLGVQPAASESLTGGASQP*RRGQSH
Trigger: GTGACTCTGCCCGCGCCTCCATGGCTGACTGGCTCC...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCTCGCTCACAGCCCCTaGGGGTCGGCTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: RYSRPFPGCLMHIRGATILAHSP*GSAGPG
Trigger: GCCCGGGCCAGCCGACCCTCAGGGGCTGTGAGCGAG...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTCTGTGCGGGGAGGGCTaGAGCGCGGGGCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSLCGEG*SAGHRS
Trigger: GGACCTGTGCCCCGCGCTTCAGCCCTCCCCGCACAG...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGTTCTTGAGCGAATGCTaGCGCTCCAGGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EKASPLGVQPAASESLTGFLSEC*RSRPGV
Trigger: CACCCCTGGCCTGGAGCGCCAGCATTCGCTCAAGAA...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGCTCTTGCCAGGGCGATaGGCAGTGTCATCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: EKASPLGVQPAASESLTGLLPGR*AVSSAV
Trigger: CACGGCTGATGACACTGCCCATCGCCCTGGCAAGAG...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGAGGGGGCAGCCTGCCCTaGGCTCGCAGGGATTGGGCT +
Preference number: 4 (lower is better)
Translates to: QLRGRSSESLRSKVESRGGGSLP*ARRDWA
Trigger: AGCCCAATCCCTGCGAGCCCAGGGCAGGCTGCCCCC...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTCCACTGCAAGGGAGCCGAAGGTGGTaGGGGCCGCGAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RISFAYFPYPALLRAPLQGSRRW*GPRAPR
Trigger: CCTTGGAGCTCGCGGCCCCCACCACCTTCGGCTCCC...TTGCAGTGGAGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ACAGGCAATGTGGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCCCTTCCGGATTGACTTaGTGGCCACCAGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: TGNVDSVAGIPVPLSLVSPSGLT*WPPGAP
Trigger: CGGGGCGCCTGGTGGCCATCAAGTCAATCCGGAAGG...GGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCCACATTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGGGTAGGCCCCGTTGCTaGTCTGTTTCACTAGGATCT +
Preference number: 4 (lower is better)
Translates to: EKASPLGVQPAASESLTGGRPRC*SVSLGS
Trigger: AGATCCTAGTGAAACAGATCAGCAACGGGGCCTACC...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGTCGCAGGGATTGGGCTaGGCTCCGGAGGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQSQGLG*APEGPP
Trigger: AGGAGGACCCTCCGGAGCTCAGCCCAATCCCTGCGA...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCGCGGGCAGAGTCACTaGCAGGGTGCCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: RYSRPFPGCLMHIRGATIRGQSH*QGAHPH
Trigger: ATGAGGGTGGGCACCCTGGCAGTGACTCTGCCCGCG...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGTCCCCCAAAGGATCCTaGCGCCAGCGCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQSPKGS*RQRLRQ
Trigger: CTGCCTGAGGCGCTGGCGGCAGGATCCTTTGGGGGA...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGTGGGCTCGCAGGGATTaGGCTGAGCTCCGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQWARRD*AELRRV
Trigger: GACCCTCCGGAGCTCAGCCCAATCCCTGCGAGCCCA...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGGAGGCTTCTGCTCCTTaGGATCCCCACTCACAAACA +
Preference number: 4 (lower is better)
Translates to: EKASPLGVQPAASESLTGEASAP*DPHSQT
Trigger: TGTTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTC...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp AACCCTTGGCGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTATGGCGAGCAGGAGGTaGGCAAGGGCGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NPWRISFAYFPYPALLRAMASRR*ARAAGE
Trigger: TTCCCCTGCCGCCCTTGCTCACCTCCTGCTCGCCAT...AGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTCCACTGCAACTGCATCTGAGAGCCTaGCCGGGCTGGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: RISFAYFPYPALLRAPLQLHLRA*PGWGNA
Trigger: GGCATTGCCCCAGCCCGGTCAGGCTCTCAGATGCAG...TTGCAGTGGAGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CTTCGTTCAGCAGGGCTGAAGACAGACACTGAACCCTTGGCGCATTTCATTTGCCACACAGCCCCGCAGTaGGGGCTCTGGGAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: LRSAGLKTDTEPLAHFICHTAPQ*GLWEPF
Trigger: GAACGGCTCCCAGAGCCCCCACTGCGGGGCTGTGTG...GCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCACCCTCTCAGCCTTCTaGGCTGGGATGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RYSRPFPGCLMHIRGATITLSAF*AGMQVL
Trigger: CAGGACCTGCATCCCAGCTCAGAAGGCTGAGAGGGT...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp AACCCTTGGCGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTCGGTGCCGCAGGTTGTaGTTGTGGTGGTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: NPWRISFAYFPYPALLRARCRRL*LWWCRF
Trigger: GAAGCGGCACCACCACAAGCACAACCTGCGGCACCG...AGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGAGGATCTTATGGTCATaGCCATCAAAGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: EKASPLGVQPAASESLTGRILWS*PSKGMV
Trigger: CACCATGCCCTTTGATGGGCATGACCATAAGATCCT...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGGGGTGCCCACCCTCATaGGGAGCCTCCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEGCPPS*GASCSP
Trigger: GGGAGAGCAGGAGGCTCCGCATGAGGGTGGGCACCC...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGCCACATCCTCCAGGGTaGCCCGGCGGGTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRPHPPG*PGGWGS
Trigger: TGAACCCCACCCGCCGGGCCACCCTGGAGGATGTGG...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGCCAGGGAGCCGAAGGTaGTGGGGGCCGCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAPGSRR*WGPRAP
Trigger: TGGAGCTCGCGGCCCCCACCACCTTCGGCTCCCTGG...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGACCTTGCGGGACTTCTTaGGCGAATGCTGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QLRGRSSESLRSKVESRGPCGTS*ANAGAP
Trigger: TGGAGCGCCAGCATTCGCTCAAGAAGTCCCGCAAGG...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTAGCAGCCCTGAAGCTTaGGGAGGCTTCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSSSPEA*GGFCSL
Trigger: CAAGGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCT...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTCATCTCCCCTCGGGGTaGAACCAGCTGCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSHLPSG*NQLHLR
Trigger: TCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATG...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCTGAGATCGCGCCATTaGACTCTAGCCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQLRSRH*TLAWAP
Trigger: TGGTGCCCAGGCTAGAGTGCAATGGCGCGATCTCAG...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTGCTCCCCAGATTCACTaGGCTCGGGAGAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSAPQIH*ARERSS
Trigger: ACTACTCCTCTCCCGAGCCCAGTGAATCTGGGGAGC...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGAGCTGTCGGGGCTTCTTaGGAATGCCCTTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: QLRGRSSESLRSKVESRGAVGAS*ECPSWG
Trigger: TCCCCAAGAAGGGCATTCTCAAGAAGCCCCGACAGC...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGGCAACCAGCTGCATCTaGGAGCCTGACCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAATSCI*EPDRAG
Trigger: CCCAGCCCGGTCAGGCTCTCAGATGCAGCTGGTTGC...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGCTGGGCCCCTTGAGATaGAGTCCACACAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRLGPLR*SPHSRR
Trigger: CCGCCTGCTGTGTGGACTTCATCTCAAGGGGCCCAG...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGTCATGCGGAGCCTCCTaGTCTCCCACTCGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGASCGAS*SPTRVA
Trigger: CGCCACCCGAGTGGGAGAGCAGGAGGCTCCGCATGA...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGCCAGGCCAGGGGTGGTaGTTCCCCCACCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAPGQGW*FPHQVH
Trigger: ATGCACCTGGTGGGGGAAGCACCACCCCTGGCCTGG...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp CTTCGTTCAGCAGGGCTGAAGACAGACACTGAACCCTTGGCGCATTTCATTTGCGCTTGCGGAGGCTTCTaGTCCTTGGGATCCCCACTC +
Preference number: 4 (lower is better)
Translates to: LRSAGLKTDTEPLAHFICACGGF*SLGSPL
Trigger: GAGTGGGGATCCCAAGGAGCAGAAGCCTCCGCAAGC...GCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp CTTCGTTCAGCAGGGCTGAAGACAGACACTGAACCCTTGGCGCATTTCATTTGCACCGGGCTGGGGCAATaGCTACTCCACTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LRSAGLKTDTEPLAHFICTGLGQ*LLHSGE
Trigger: CTCACCTGAGTGGAGTAGGCATTGCCCCAGCCCGGT...GCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACAGGCAATGTGGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTGCTCAGGGCTCCACTaGAAACCCTCTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TGNVDSVAGIPVPLSLVSCSGLH*KPSQPS
Trigger: AGAAGGCTGAGAGGGTTTGCAGTGGAGCCCTGAGCA...GGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCCACATTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTTCCCATATCCAGCCCTaGTCAGGGCTCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSSHIQP*SGLHCK
Trigger: TTTGCAGTGGAGCCCTGAGCAGGGCTGGATATGGGA...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGCCAGCTGTCCACCTCTaGGCCTGTGTAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEPAVHL*ACVGLP
Trigger: GGGAAGCCCTACACAGGCCCAGAGGTGGACAGCTGG...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTTCAGCCGTGTCACTGTaGAGAGACTGGGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSSAVSL*RDWAMS
Trigger: TGACATGGCCCAGTCTCTCCACAGTGACACGGCTGA...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGCCGCAGTGGGGGCTCTaGGAGCCGTTCAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAPQWGL*EPFRQV
Trigger: GACTTGCCTGAACGGCTCCCAGAGCCCCCACTGCGG...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGATGGAGGAGCAGCCCTaGAGCTTGCGGAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEMEEQP*SLRRLL
Trigger: CAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCTCCAT...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp AACCCTTGGCGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTCCTACTCCACTCAGGTaGGCTTTGAGCAGACCCTCA +
Preference number: 4 (lower is better)
Translates to: NPWRISFAYFPYPALLRAPTPLR*ALSRPS
Trigger: TGAGGGTCTGCTCAAAGCTCACCTGAGTGGAGTAGG...AGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTGAAGACAGAGGAGGCTGGGCCCCTTaGGATGAAGTCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: IPVPLSLVSSSFSRAEDRGGWAP*DEVHTA
Trigger: TGCTGTGTGGACTTCATCTCAAGGGGCCCAGCCTCC...TCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp TCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGAAGTTCTGAGTCACTaGGGTCCAAGGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVAGIPVPLSLVSSSFSREVLSH*GPRWSP
Trigger: TGGACTCCACCTTGGACCTCAGTGACTCAGAACTTC...CCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCATCTGCCGGAAGAAATaGCTAGCTTCGCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RYSRPFPGCLMHIRGATIICRKK*LASRSL
Trigger: CAGTGAGCGCGAAGCTAGGCATTTCTTCCGGCAGAT...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTGAAGACAGAGACTTCTTGAGCGAATaGTGGCGCTCCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: IPVPLSLVSSSFSRAEDRDFLSE*WRSRPG
Trigger: CCCTGGCCTGGAGCGCCAGCATTCGCTCAAGAAGTC...TCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACAGGCAATGTGGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCAGAGTATTCATGGGATaGAGGAGATGGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TGNVDSVAGIPVPLSLVSRVFMG*RRWALG
Trigger: TCCCAGGGCCCATCTCCTGCATCCCATGAATACTCT...GGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCCACATTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTCCACTGCAAAAACCAGCGACTCCATaGCGAGCAGGAGGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: RISFAYFPYPALLRAPLQKPATP*RAGGEQ
Trigger: TTGCTCACCTCCTGCTCGCCATGGAGTCGCTGGTTT...TTGCAGTGGAGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCTCAGGCAAGTCCAGCTaGTCAAAGGACTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RYSRPFPGCLMHIRGATISGKSS*SKDSED
Trigger: GTCCTCTGAGTCCTTTGACCAGCTGGACTTGCCTGA...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGCTCAGCCTTCTGAGCTaGGATGCAGGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVELSLLS*DAGPGR
Trigger: CCTCCCAGGACCTGCATCCCAGCTCAGAAGGCTGAG...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTGGGGCTTGGGCGACTTaGTCAGCCCTTCCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: IKITKRYSRPFPGCLMHIGAWAT*SALPPA
Trigger: CGCTGGCGGAAGGGCTGATCAAGTCGCCCAAGCCCC...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CTTCGTTCAGCAGGGCTGAAGACAGACACTGAACCCTTGGCGCATTTCATTTGCTTTGTCCTTCCGGATTaGCTTGATGGCCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: LRSAGLKTDTEPLAHFICFVLPD*LDGHQA
Trigger: CGCCTGGTGGCCATCAAGTCAATCCGGAAGGACAAA...GCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCTGACACCTTCTTCTTaGGAATGCCCTTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQLTPSS*ECPLAA
Trigger: AGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAG...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGCACAAACACGTCGCCTaGGTCCAAGAGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEHKHVA*VQELPR
Trigger: TCTGGGGAGCTCTTGGACGCAGGCGACGTGTTTGTG...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGACTCAGAGGACAGGATaGTGTCCTCGCTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRTQRTG*CPRSQP
Trigger: GGGCTGTGAGCGAGGACAGCATCCTGTCCTCTGAGT...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTGAAGACAGAATCAGAGGGTTTAGGTaGCTCCCGGTAGGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: IPVPLSLVSSSFSRAEDRIRGFR*LPVGPV
Trigger: AACGGGGCCTACCGGGAGCCACCTAAACCCTCTGAT...TCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGAGCTCCAAGGCTGTCTaGGAGAACTTGCCATTGAGT +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQSSKAV*ENLPLS
Trigger: ACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCT...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCAAGAAACAGGCAATGTaGACTCTGTCGCGGGCATTC +
Preference number: 4 (lower is better)
Translates to: RYSRPFPGCLMHIRGATIKKQAM*TLSRAF
Trigger: GAATGCCCGCGACAGAGTCCACATTGCCTGTTTCTT...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGTGTACAGAGTATTCATaGGATGCAGGAGATGGGCCC +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQCTEYS*DAGDGP
Trigger: GGGCCCATCTCCTGCATCCCATGAATACTCTGTACA...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGATGGATGGCAATGATGTaGGGGTGGTTGAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: QLRGRSSESLRSKVESRGWMAMM*GWLSDD
Trigger: GTCATCACTCAACCACCCTCACATCATTGCCATCCA...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGGGCTGGCATACTCCATaGCGATCACGATCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEGWHTP*RSRSCC
Trigger: GCAGCAAGATCGTGATCGTCATGGAGTATGCCAGCC...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGCACTCAGGTGAGCTTTaGGCAGACCCTCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAHSGEL*ADPQCL
Trigger: CAGGCACTGAGGGTCTGCTCAAAGCTCACCTGAGTG...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGAGCTGAAGACAGACACTaGACCCTTGGCGCATTTCAT +
Preference number: 4 (lower is better)
Translates to: QLRGRSSESLRSKVESRGAEDRH*TLGAFH
Trigger: ATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGC...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CTTCGTTCAGCAGGGCTGAAGACAGACACTGAACCCTTGGCGCATTTCATTTGCTTCGTTCAGCAGGGCTaGAGACAGACACTGAACCCT +
Preference number: 4 (lower is better)
Translates to: LRSAGLKTDTEPLAHFICFVQQG*RQTLNP
Trigger: AGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAA...GCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGCACTTGGGCAGGGAATaGGTAGGGAAGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAHLGRE*VGKELS
Trigger: GGACAGCTCCTTCCCTACTCATTCCCTGCCCAAGTG...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTGACATTCTAGAGTCCTaGAGGCCTAGAGAACACATC +
Preference number: 4 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSDILES*RPREHI
Trigger: GATGTGTTCTCTAGGCCTTCAGGACTCTAGAATGTC...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTGAAGACAGACCACCAGGTGCATGCTaGTTGAAGAAGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: IPVPLSLVSSSFSRAEDRPPGAC*LKKLHT
Trigger: GGTGTGCAGCTTCTTCAAGCAGCATGCACCTGGTGG...TCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCTTGATGGTAGAGGTTaGAGAGACCGAAGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQLDGRG*RDRSQQ
Trigger: TTGCTGACTTCGGTCTCTCCAACCTCTACCATCAAG...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGGCAGGAGATGGGCCCTaGGAGAGTTCTCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAAGDGP*ESSLSR
Trigger: CCTGGAAAGAGAACTCTCCCAGGGCCCATCTCCTGC...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGGCCACCATCCAGTTCTaGTGGTTGGTAGGAACGGGA +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEATIQF*WLVGTG
Trigger: TCCCGTTCCTACCAACCACCAGAACTGGATGGTGGC...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCGAAGTCAGCAATCTTaGTATTCCCATTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQRSQQS*YSHWHP
Trigger: TGGATGCCAATGGGAATATCAAGATTGCTGACTTCG...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp AACCCTTGGCGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTCTTGAGAATGCCCTTTaGCAGCTTGAGGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NPWRISFAYFPYPALLRALENAL*QLEVAL
Trigger: AAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAAG...AGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGAGGATGCCTTTGCGATaGAGGAGCAGCCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGARMPLR*RSSPEA
Trigger: AGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCT...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGGTGTGTAAAGAGGTCTaGCCCCACTTGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAVCKEV*PHLGRE
Trigger: TTCCCTGCCCAAGTGGGGCCAGACCTCTTTACACAC...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGGGCTCAGGCCAGGTTTaGAGGATGGAAAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEGSGQV*RMEKGR
Trigger: TCTTCCCTTTTCCATCCTCCAAACCTGGCCTGAGCC...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
3UTR CAA 72 bp CTTCGTTCAGCAGGGCTGAAGACAGACACTGAACCCTaGGCGCATTTCATTTGCCTACTTCCCATATCCAGC +
Preference number: 4 (lower is better)
Translates to: LRSAGLKTDTEP*AHFICLLPISS
Trigger: GCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTGATCTTGCTCATCTTTaGTTTTGTCCTTCCGGATTG +
Preference number: 4 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSDLAHL*FCPSGL
Trigger: CAATCCGGAAGGACAAAATCAAAGATGAGCAAGATC...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTTGCCCTTTGGCAGCTTaGGGTTGCTCTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IKITKRYSRPFPGCLMHICPLAA*GCSCQG
Trigger: GCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCA...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTGCTCCTCAAGCCCCGTaGGGTTGTCCACAGACACAC +
Preference number: 4 (lower is better)
Translates to: IKITKRYSRPFPGCLMHIAPQAP*GCPQTH
Trigger: GTGTGTCTGTGGACAACCTCACGGGGCTTGAGGAGC...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp CAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTCCAGAGGAATCTCCCTCCGTATGTaGATCAGATCTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: QLRGRSSESLRSKVESRGISLRM*IRSCSS
Trigger: AGATGAGCAAGATCTGATGCACATACGGAGGGAGAT...TCCTCTGGACTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGCATCAAAGGGCATGGTaGCATGCACCAGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEHQRAW*HAPGCR
Trigger: TCTACATCCTGGTGCATGGCACCATGCCCTTTGATG...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGAGACCATTCCCAGGATaGCTCATGCACATTAGGGGT +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVERPFPG*LMHIRG
Trigger: ACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCT...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp AACCCTTGGCGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTTTCACTAGGATCTTATaGTCATGCCCATCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: NPWRISFAYFPYPALLRAFTRIL*SCPSKG
Trigger: GCCCTTTGATGGGCATGACCATAAGATCCTAGTGAA...AGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTGAAGACAGAACCATCCAGTTCTGGTaGTTGGTAGGAACGGGAATG +
Preference number: 4 (lower is better)
Translates to: IPVPLSLVSSSFSRAEDRTIQFW*LVGTGM
Trigger: CATTCCCGTTCCTACCAACCACCAGAACTGGATGGT...TCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR TCA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTGCTGCTGCCGCTCGCTaGTGTAGTCATAAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: IKITKRYSRPFPGCLMHIAAAAR*CSHKGR
Trigger: GCGACCTTTATGACTACATCAGCGAGCGGCAGCAGC...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGATGTGCATCAGATCTTaGTCATCTTTGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQMCIRS*SSLILS
Trigger: GGACAAAATCAAAGATGAGCAAGATCTGATGCACAT...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTGCTTCCCCCACCAGGTaGATGCTGCTTGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: IKITKRYSRPFPGCLMHIASPTR*MLLEEA
Trigger: AGCTTCTTCAAGCAGCATGCACCTGGTGGGGGAAGC...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTTGGCGCATTTCATTTaGCTACTTCCCATATCCAGC +
Preference number: 4 (lower is better)
Translates to: TLEQLRGRSSESLRSKVELAHFI*LLPISS
Trigger: GCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAA...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGCAGACACTGAACCCTTaGCGCATTTCATTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGAQTLNP*RISFAY
Trigger: GTAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTG...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGCGATCACGATCTTGCTaGTGTTCTCAAACACTTCAT +
Preference number: 4 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRRSRSC*CSQTLH
Trigger: ATGAAGTGTTTGAGAACAGCAGCAAGATCGTGATCG...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR GCA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTATGTCTGCAGGAACTTaGCTTGATGGTAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: IKITKRYSRPFPGCLMHIMSAGT*LDGRGW
Trigger: CCAACCTCTACCATCAAGGCAAGTTCCTGCAGACAT...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CCA 90 bp ATAAAAATAACGAAGCGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTTTTAATGGTACTTTTTaGCCACGGAGGTCCATTAGG +
Preference number: 4 (lower is better)
Translates to: IKITKRYSRPFPGCLMHIFNGTF*PRRSIR
Trigger: CCTAATGGACCTCCGTGGCCAAAAAGTACCATTAAA...AATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACGCTTCGTTATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp TCAGCCCTTCCGCCAGCGGCCGGGCTAGCTCTGCGGCCGAGGGAGTaGGGCCGGAGCGCCGCGCGAAAACCAGCGACTCCATGGCGAGCA +
Preference number: 5 (lower is better)
Translates to: SALPPAAGLALRPRE*GRSAARKPATPWRA
Trigger: TGCTCGCCATGGAGTCGCTGGTTTTCGCGCGGCGCTCCGGCCCCACTCCCTCGGCCGCAGAGCTAGCCCGGCCGCTGGCGGAAGGGCTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp CATTCTCCAGGAGGGGGCGGGAGGAACGCCGGAGCCAGTCAGCCATaGAGGCGCGGGCAGAGTCACTGCCAGGGTGCCCACCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: HSPGGGGRNAGASQP*RRGQSHCQGAHPHA
Trigger: CGCATGAGGGTGGGCACCCTGGCAGTGACTCTGCCCGCGCCTCCATGGCTGACTGGCTCCGGCGTTCCTCCCGCCCCCTCCTGGAGAATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 90 bp GCCGTTCAGGCAAGTCCAGCTGGTCAAAGGACTCAGAGGACAGGATaGTGTCCTCGCTCACAGCCCCTGAGGGTCGGCTGGCCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: AVQASPAGQRTQRTG*CPRSQPLRVGWPGP
Trigger: TGGCCCGGGCCAGCCGACCCTCAGGGGCTGTGAGCGAGGACAGCATCCTGTCCTCTGAGTCCTTTGACCAGCTGGACTTGCCTGAACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGTCCTTGCGGGACTTCTaGAGCGAATGCTGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: EKASPLGVQPAASESLTGSLRDF*SECWRS
Trigger: GGAGCGCCAGCATTCGCTCAAGAAGTCCCGCAAGGA...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGTCAAGCCCCGTGAGGTaGTCCACAGACACACAGCCC +
Preference number: 5 (lower is better)
Translates to: EKASPLGVQPAASESLTGSSPVR*STDTQP
Trigger: GGGCTGTGTGTCTGTGGACAACCTCACGGGGCTTGA...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp CACTCACAAACACGTCGCCTGCGTCCAAGAGCTCCCCAGATTCACTaGGCTCGGGAGAGGAGTAGTAGCCAGACTCGCGCTGTCGGGGCT +
Preference number: 5 (lower is better)
Translates to: HSQTRRLRPRAPQIH*ARERSSSQTRAVGA
Trigger: AGCCCCGACAGCGCGAGTCTGGCTACTACTCCTCTCCCGAGCCCAGTGAATCTGGGGAGCTCTTGGACGCAGGCGACGTGTTTGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp TGCGATGGAGGAGCAGCCCTGAAGCTTGCGGAGGCTTCTGCTCCTTaGGATCCCCACTCACAAACACGTCGCCTGCGTCCAAGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: CDGGAALKLAEASAP*DPHSQTRRLRPRAP
Trigger: GGGAGCTCTTGGACGCAGGCGACGTGTTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCTCCATCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 90 bp CGGAGGCTTCTGCTCCTTGGGATCCCCACTCACAAACACGTCGCCTaGGTCCAAGAGCTCCCCAGATTCACTGGGCTCGGGAGAGGAGTA +
Preference number: 5 (lower is better)
Translates to: RRLLLLGIPTHKHVA*VQELPRFTGLGRGV
Trigger: TACTCCTCTCCCGAGCCCAGTGAATCTGGGGAGCTCTTGGACGCAGGCGACGTGTTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp TCCAGGGAGCCGAAGGTGGTGGGGGCCGCGAGCTCCAAGGCTGTCTaGGAGAACTTGCCATTGAGTTTGAGGATGCCTTTGCGATGGAGG +
Preference number: 5 (lower is better)
Translates to: SREPKVVGAASSKAV*ENLPLSLRMPLRWR
Trigger: CCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCTCGCGGCCCCCACCACCTTCGGCTCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp TCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGAGGGGCTTGGGCGACTaGATCAGCCCTTCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SVAGIPVPLSLVSSSFSRRGLGD*ISPSAS
Trigger: GCTGGCGGAAGGGCTGATCAAGTCGCCCAAGCCCCT...CCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp CCAGGGCGATGGGCAGTGTCATCAGCCGTGTCACTGTGGAGAGACTaGGCCATGTCATTCTCCTTGCGGGACTTCTTGAGCGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: PGRWAVSSAVSLWRD*AMSFSLRDFLSECW
Trigger: CCAGCATTCGCTCAAGAAGTCCCGCAAGGAGAATGACATGGCCCAGTCTCTCCACAGTGACACGGCTGATGACACTGCCCATCGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGGCTGTCTGGGAGAACTaGCCATTGAGTTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: EKASPLGVQPAASESLTGAVWEN*PLSLRM
Trigger: CATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGC...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTGCTGAGATCGCGCCATaGCACTCTAGCCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSAEIAP*HSSLGT
Trigger: GGTGCCCAGGCTAGAGTGCAATGGCGCGATCTCAGC...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS TCA 90 bp TGGGCTGAGCTCCGGAGGGTCCTCCTGTACCCCTTCTGCAGAGGCTaGCACCTTCTTCTTGAGAATGCCCTTTGGCAGCTTGAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: WAELRRVLLYPFCRG*HLLLENALWQLEVA
Trigger: AGCAACCTCAAGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAGCCTCTGCAGAAGGGGTACAGGAGGACCCTCCGGAGCTCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp TTGCTCTTGCCAGGGCGATGGGCAGTGTCATCAGCCGTGTCACTGTaGAGAGACTGGGCCATGTCATTCTCCTTGCGGGACTTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LLLPGRWAVSSAVSL*RDWAMSFSLRDFLS
Trigger: GCTCAAGAAGTCCCGCAAGGAGAATGACATGGCCCAGTCTCTCCACAGTGACACGGCTGATGACACTGCCCATCGCCCTGGCAAGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp TTGAGAATGCCCTTTGGCAGCTTGAGGTTGCTCTTGCCAGGGCGATaGGCAGTGTCATCAGCCGTGTCACTGTGGAGAGACTGGGCCATG +
Preference number: 5 (lower is better)
Translates to: LRMPFGSLRLLLPGR*AVSSAVSLWRDWAM
Trigger: CATGGCCCAGTCTCTCCACAGTGACACGGCTGATGACACTGCCCATCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 90 bp TTGAGTTTGAGGATGCCTTTGCGATGGAGGAGCAGCCCTGAAGCTTaGGGAGGCTTCTGCTCCTTGGGATCCCCACTCACAAACACGTCG +
Preference number: 5 (lower is better)
Translates to: LSLRMPLRWRSSPEA*GGFCSLGSPLTNTS
Trigger: CGACGTGTTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 90 bp GCTGTCTGGGAGAACTTGCCATTGAGTTTGAGGATGCCTTTGCGATaGAGGAGCAGCCCTGAAGCTTGCGGAGGCTTCTGCTCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: AVWENLPLSLRMPLR*RSSPEACGGFCSLG
Trigger: TCCCAAGGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCATGCCCTTTGGCAGCTaGAGGTTGCTCTTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RYSRPFPGCLMHIRGATIMPFGS*RLLLPG
Trigger: CCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCAT...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ACAGGCAATGTGGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCGGAGGCTTCTGCTCCTaGGGATCCCCACTCACAAAC +
Preference number: 5 (lower is better)
Translates to: TGNVDSVAGIPVPLSLVSGGFCS*GSPLTN
Trigger: GTTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTCC...GGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCCACATTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS TCA 90 bp CTTGCCATTGAGTTTGAGGATGCCTTTGCGATGGAGGAGCAGCCCTaGAGCTTGCGGAGGCTTCTGCTCCTTGGGATCCCCACTCACAAA +
Preference number: 5 (lower is better)
Translates to: LAIEFEDAFAMEEQP*SLRRLLLLGIPTHK
Trigger: TTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGTCCTTCCGGATTGACTaGATGGCCACCAGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRSFRID*MATRRP
Trigger: GGGGCGCCTGGTGGCCATCAAGTCAATCCGGAAGGA...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp AACCCTTGGCGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTTTTGGCAGCTTGAGGTaGCTCTTGCCAGGGCGATGG +
Preference number: 5 (lower is better)
Translates to: NPWRISFAYFPYPALLRAFGSLR*LLPGRW
Trigger: CCATCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAA...AGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp TCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGAGTTTGAGGATGCCTTaGCGATGGAGGAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SVAGIPVPLSLVSSSFSRSLRMP*RWRSSP
Trigger: AGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACT...CCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ACAGGCAATGTGGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTTCTTCATTAGGGGCTaGGGCGACTTGATCAGCCCT +
Preference number: 5 (lower is better)
Translates to: TGNVDSVAGIPVPLSLVSFFIRG*GDLISP
Trigger: AGGGCTGATCAAGTCGCCCAAGCCCCTAATGAAGAA...GGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCCACATTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAGAAGGCATCTCCCCTCGGGGTGCAACCAGCTGCATCTGAGAGCCTGACCGGGAGATCTTGCTCATCTTaGATTTTGTCCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: EKASPLGVQPAASESLTGRSCSS*ILSFRI
Trigger: AATCCGGAAGGACAAAATCAAAGATGAGCAAGATCT...CCCGGTCAGGCTCTCAGATGCAGCTGGTTGCACCCCGAGGGGAGATGCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCTGCAGGAACTTGCCTaGATGGTAGAGGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: RYSRPFPGCLMHIRGATILQELA*MVEVGE
Trigger: CTCTCCAACCTCTACCATCAAGGCAAGTTCCTGCAG...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGCGCTGTCGGGGCTTCTaGAGAATGCCCTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRRCRGF*RMPFLG
Trigger: CCCCAAGAAGGGCATTCTCAAGAAGCCCCGACAGCG...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGAGGATGTTCTCCAGCTaGAGATCTCGGTGGACAACT +
Preference number: 5 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQRMFSS*RSRWTT
Trigger: AGTTGTCCACCGAGATCTCAAGCTGGAGAACATCCT...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGAAGAAGCTGCACACCTaGGCCCCATTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRKKLHT*APFSRR
Trigger: CCTCCTGGAGAATGGGGCCAAGGTGTGCAGCTTCTT...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGAGCTTGAGGTTGCTCTaGCCAGGGCGATGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGASLRLL*PGRWAV
Trigger: CACTGCCCATCGCCCTGGCAAGAGCAACCTCAAGCT...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGATCCAGTTCTGGTGGTaGGTAGGAACGGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQIQFWW*VGTGMC
Trigger: ACACATTCCCGTTCCTACCAACCACCAGAACTGGAT...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 90 bp TCTGTTTCACTAGGATCTTATGGTCATGCCCATCAAAGGGCATGGTaGCATGCACCAGGATGTAGAGGAGAACACCCAGGGACCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SVSLGSYGHAHQRAW*HAPGCRGEHPGTSC
Trigger: ACAGCTGGTCCCTGGGTGTTCTCCTCTACATCCTGGTGCATGGCACCATGCCCTTTGATGGGCATGACCATAAGATCCTAGTGAAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTCCGAAGTCAGCAATCTaGATATTCCCATTGGCATCC +
Preference number: 5 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSPKSAI*IFPLAS
Trigger: GGATGCCAATGGGAATATCAAGATTGCTGACTTCGG...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGCCAGGTGCATGCTGCTaGAAGAAGCTGCACACCTTG +
Preference number: 5 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEPGACC*KKLHTL
Trigger: CAAGGTGTGCAGCTTCTTCAAGCAGCATGCACCTGG...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGGCCATGTCATTCTCCTaGCGGGACTTCTTGAGCGAA +
Preference number: 5 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRAMSFS*RDFLSE
Trigger: TTCGCTCAAGAAGTCCCGCAAGGAGAATGACATGGC...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTGAAGACAGAGCTGACACCTTCTTCTaGAGAATGCCCTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: IPVPLSLVSSSFSRAEDRADTFF*RMPFGS
Trigger: GCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAGC...TCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp AACCCTTGGCGCATTTCATTTGCCTACTTCCCATATCCAGCCCTGCTCAGGGCTACAGACACTGAACCCTaGGCGCATTTCATTTGCCTA +
Preference number: 5 (lower is better)
Translates to: NPWRISFAYFPYPALLRATDTEP*AHFICL
Trigger: TAGGCAAATGAAATGCGCCAAGGGTTCAGTGTCTGT...AGCCCTGAGCAGGGCTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp CGTTACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCTGCTCATCTTTGATTTaGTCCTTCCGGATTGACTTG +
Preference number: 5 (lower is better)
Translates to: RYSRPFPGCLMHIRGATICSSLI*SFRIDL
Trigger: CAAGTCAATCCGGAAGGACAAAATCAAAGATGAGCA...GATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGTAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ACTTTAGAGCAGCTTAGAGGCAGAAGTTCTGAGTCACTGAGGTCCAAGGTGGAGTGGGAGAACTTGCCATaGAGTTTGAGGATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TLEQLRGRSSESLRSKVEWENLP*SLRMPL
Trigger: CAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCA...CTCCACCTTGGACCTCAGTGACTCAGAACTTCTGCCTCTAAGCTGCTCTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GAAGGAGCTGTCCTTAGAAGGCACCATGTGTACAGAGTATTCATGGGATGCAGGCTTGGCGCATTTCATTaGCCTACTTCCCATATCCAG +
Preference number: 5 (lower is better)
Translates to: EGAVLRRHHVYRVFMGCRLGAFH*PTSHIQ
Trigger: CTGGATATGGGAAGTAGGCAAATGAAATGCGCCAAG...CCTGCATCCCATGAATACTCTGTACACATGGTGCCTTCTAAGGACAGCTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ACTCCAGACCATTCCCAGGATGCCTCATGCACATTAGGGGTGCCACCATCCAGTTTGAAGAAACAGAGATaGTGTTCTCTTACTCCTAGG +
Preference number: 5 (lower is better)
Translates to: TPDHSQDASCTLGVPPSSLKKQR*CSLTPR
Trigger: CCTAGGAGTAAGAGAACACAATCTCTGTTTCTTCAA...ACTGGATGGTGGCACCCCTAATGTGCATGAGGCATCCTGGGAATGGTCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp GGACTCTGTCGCGGGCATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGTATGTGCATCAGATCTaGCTCATCTTTGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: GLCRGHSRSPLFSILFVQYVHQI*LIFDFV
Trigger: GACAAAATCAAAGATGAGCAAGATCTGATGCACATA...CTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAATGCCCGCGACAGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp ATTCCCGTTCCCCTCTCTTTAGTATCCTCTTCGTTCAGCAGGGCTGAAGACAGAATGACGATCACGATCTaGCTGCTGTTCTCAAACACT +
Preference number: 5 (lower is better)
Translates to: IPVPLSLVSSSFSRAEDRMTITI*LLFSNT
Trigger: AGTGTTTGAGAACAGCAGCAAGATCGTGATCGTCAT...TCTGTCTTCAGCCCTGCTGAACGAAGAGGATACTAAAGAGAGGGGAACGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp CTTCGTTCAGCAGGGCTGAAGACAGACACTGAACCCTTGGCGCATTTCATTTGCATCTTGATATTCCCATaGGCATCCAAGAGGATGTTC +
Preference number: 5 (lower is better)
Translates to: LRSAGLKTDTEPLAHFICILIFP*ASKRMF
Trigger: GAACATCCTCTTGGATGCCAATGGGAATATCAAGAT...GCAAATGAAATGCGCCAAGGGTTCAGTGTCTGTCTTCAGCCCTGCTGAACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS-3UTR CAA 90 bp CAGAGATTGTGTTCTCTTACTCCTAGGCTAAATAAGGAAGGGTTAGGTGGGGCGAACTTGCCATTGAGTTaGAGGATGCCTTTGCGATGG +
Preference number: 5 (lower is better)
Translates to: QRLCSLTPRLNKEGLGGANLPLS*RMPLRW
Trigger: CCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTT...CGCCCCACCTAACCCTTCCTTATTTAGCCTAGGAGTAAGAGAACACAATCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp CCGCCAGCGGCCGGGCTAGCTCTGCGGCCGAGGGAGTaGGGCCGGAGCGCCGCGCGAAAACCAGCGACTCCA +
Preference number: 6 (lower is better)
Translates to: PPAAGLALRPRE*GRSAARKPATP
Trigger: TGGAGTCGCTGGTTTTCGCGCGGCGCTCCGGCCCCACTCCCTCGGCCGCAGAGCTAGCCCGGCCGCTGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp GGAGGGGGCGGGAGGAACGCCGGAGCCAGTCAGCCATaGAGGCGCGGGCAGAGTCACTGCCAGGGTGCCCAC +
Preference number: 6 (lower is better)
Translates to: GGGGRNAGASQP*RRGQSHCQGAH
Trigger: GTGGGCACCCTGGCAGTGACTCTGCCCGCGCCTCCATGGCTGACTGGCTCCGGCGTTCCTCCCGCCCCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp GGCGAGGTGGGGCGAGTTCATCCAGGGAGCCGAAGGTaGTGGGGGCCGCGAGCTCCAAGGCTGTCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: GEVGRVHPGSRR*WGPRAPRLSGR
Trigger: TCTCCCAGACAGCCTTGGAGCTCGCGGCCCCCACCACCTTCGGCTCCCTGGATGAACTCGCCCCACCTCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp GAGGTGGGGCGAGTTCATCCAGGGAGCCGAAGGTGGTaGGGGCCGCGAGCTCCAAGGCTGTCTGGGAGAACT +
Preference number: 6 (lower is better)
Translates to: EVGRVHPGSRRW*GPRAPRLSGRT
Trigger: AGTTCTCCCAGACAGCCTTGGAGCTCGCGGCCCCCACCACCTTCGGCTCCCTGGATGAACTCGCCCCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp TGGTGCCGCTTCACCGCCTGCTTCTTCATTAGGGGCTaGGGCGACTTGATCAGCCCTTCCGCCAGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: WCRFTACFFIRG*GDLISPSASGR
Trigger: CCGGCCGCTGGCGGAAGGGCTGATCAAGTCGCCCAAGCCCCTAATGAAGAAGCAGGCGGTGAAGCGGCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 72 bp TCTGTCAGGGAAAAGCAGCTGTCCCCCAAAGGATCCTaGCGCCAGCGCCTCAGGCAGCTTCCAGGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: SVREKQLSPKGS*RQRLRQLPGPS
Trigger: AGAGGGCCCTGGAAGCTGCCTGAGGCGCTGGCGGCAGGATCCTTTGGGGGACAGCTGCTTTTCCCTGACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS TCA 72 bp GAGACTGGGCCATGTCATTCTCCTTGCGGGACTTCTTaGGCGAATGCTGGCGCTCCAGGCCAGGGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: ETGPCHSPCGTS*ANAGAPGQGWC
Trigger: GCACCACCCCTGGCCTGGAGCGCCAGCATTCGCTCAAGAAGTCCCGCAAGGAGAATGACATGGCCCAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 72 bp CTGCTCCTTGGGATCCCCACTCACAAACACGTCGCCTaGGTCCAAGAGCTCCCCAGATTCACTGGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: LLLGIPTHKHVA*VQELPRFTGLG
Trigger: CCCGAGCCCAGTGAATCTGGGGAGCTCTTGGACGCAGGCGACGTGTTTGTGAGTGGGGATCCCAAGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 72 bp GCAAGTCCAGCTGGTCAAAGGACTCAGAGGACAGGATaGTGTCCTCGCTCACAGCCCCTGAGGGTCGGCTGG +
Preference number: 6 (lower is better)
Translates to: ASPAGQRTQRTG*CPRSQPLRVGW
Trigger: CCAGCCGACCCTCAGGGGCTGTGAGCGAGGACAGCATCCTGTCCTCTGAGTCCTTTGACCAGCTGGACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp ACACGTCGCCTGCGTCCAAGAGCTCCCCAGATTCACTaGGCTCGGGAGAGGAGTAGTAGCCAGACTCGCGCT +
Preference number: 6 (lower is better)
Translates to: TRRLRPRAPQIH*ARERSSSQTRA
Trigger: AGCGCGAGTCTGGCTACTACTCCTCTCCCGAGCCCAGTGAATCTGGGGAGCTCTTGGACGCAGGCGACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp GGAGCAGCCCTGAAGCTTGCGGAGGCTTCTGCTCCTTaGGATCCCCACTCACAAACACGTCGCCTGCGTCCA +
Preference number: 6 (lower is better)
Translates to: GAALKLAEASAP*DPHSQTRRLRP
Trigger: TGGACGCAGGCGACGTGTTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp GTTGTCCACAGACACACAGCCCCGCAGTGGGGGCTCTaGGAGCCGTTCAGGCAAGTCCAGCTGGTCAAAGGA +
Preference number: 6 (lower is better)
Translates to: VVHRHTAPQWGL*EPFRQVQLVKG
Trigger: TCCTTTGACCAGCTGGACTTGCCTGAACGGCTCCCAGAGCCCCCACTGCGGGGCTGTGTGTCTGTGGACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp AGGAGCAGCCCTGAAGCTTGCGGAGGCTTCTGCTCCTaGGGATCCCCACTCACAAACACGTCGCCTGCGTCC +
Preference number: 6 (lower is better)
Translates to: RSSPEACGGFCS*GSPLTNTSPAS
Trigger: GGACGCAGGCGACGTGTTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp TCACTGTGGAGAGACTGGGCCATGTCATTCTCCTTGCGGGACTTCTaGAGCGAATGCTGGCGCTCCAGGCCAGGGGTGGTGCTTCCCCCA +
Preference number: 6 (lower is better)
Translates to: SLWRDWAMSFSLRDF*SECWRSRPGVVLPP
Trigger: TGGGGGAAGCACCACCCCTGGCCTGGAGCGCCAGCATTCGCTCAAGAAGTCCCGCAAGGAGAATGACATGGCCCAGTCTCTCCACAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp TTGCGATGGAGGAGCAGCCCTGAAGCTTGCGGAGGCTTCTGCTCCTaGGGATCCCCACTCACAAACACGTCGCCTGCGTCCAAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: LRWRSSPEACGGFCS*GSPLTNTSPASKSS
Trigger: GGAGCTCTTGGACGCAGGCGACGTGTTTGTGAGTGGGGATCCCAAGGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCTCCATCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp CCGAAGGTGGTGGGGGCCGCGAGCTCCAAGGCTGTCTGGGAGAACTaGCCATTGAGTTTGAGGATGCCTTTGCGATGGAGGAGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: PKVVGAASSKAVWEN*PLSLRMPLRWRSSP
Trigger: AGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCTCGCGGCCCCCACCACCTTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp CCACCGGATCAGGCCACAGGCATCAGAGGGTTTAGGTaGCTCCCGGTAGGCCCCGTTGCTGATCTGTTTCAC +
Preference number: 6 (lower is better)
Translates to: PPDQATGIRGFR*LPVGPVADLFH
Trigger: GTGAAACAGATCAGCAACGGGGCCTACCGGGAGCCACCTAAACCCTCTGATGCCTGTGGCCTGATCCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp CCAGGGCGATGGGCAGTGTCATCAGCCGTGTCACTGTaGAGAGACTGGGCCATGTCATTCTCCTTGCGGGAC +
Preference number: 6 (lower is better)
Translates to: PGRWAVSSAVSL*RDWAMSFSLRD
Trigger: GTCCCGCAAGGAGAATGACATGGCCCAGTCTCTCCACAGTGACACGGCTGATGACACTGCCCATCGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp TCATCAGCCGTGTCACTGTGGAGAGACTGGGCCATGTCATTCTCCTaGCGGGACTTCTTGAGCGAATGCTGGCGCTCCAGGCCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: SSAVSLWRDWAMSFS*RDFLSECWRSRPGV
Trigger: CACCCCTGGCCTGGAGCGCCAGCATTCGCTCAAGAAGTCCCGCAAGGAGAATGACATGGCCCAGTCTCTCCACAGTGACACGGCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp GGGGCCGCGAGCTCCAAGGCTGTCTGGGAGAACTTGCCATTGAGTTaGAGGATGCCTTTGCGATGGAGGAGCAGCCCTGAAGCTTGCGGA +
Preference number: 6 (lower is better)
Translates to: GAASSKAVWENLPLS*RMPLRWRSSPEACG
Trigger: TCCGCAAGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCTCGCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp GTGGTGGGGGCCGCGAGCTCCAAGGCTGTCTGGGAGAACTTGCCATaGAGTTTGAGGATGCCTTTGCGATGGAGGAGCAGCCCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: VVGAASSKAVWENLP*SLRMPLRWRSSPEA
Trigger: AGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCTCGCGGCCCCCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp CCCTTTGGCAGCTTGAGGTTGCTCTTGCCAGGGCGATaGGCAGTGTCATCAGCCGTGTCACTGTGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: PFGSLRLLLPGR*AVSSAVSLWRD
Trigger: GTCTCTCCACAGTGACACGGCTGATGACACTGCCCATCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp CCGAAGGTGGTGGGGGCCGCGAGCTCCAAGGCTGTCTaGGAGAACTTGCCATTGAGTTTGAGGATGCCTTTG +
Preference number: 6 (lower is better)
Translates to: PKVVGAASSKAV*ENLPLSLRMPL
Trigger: CAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCTCGCGGCCCCCACCACCTTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp GTGGGGGCCGCGAGCTCCAAGGCTGTCTGGGAGAACTaGCCATTGAGTTTGAGGATGCCTTTGCGATGGAGG +
Preference number: 6 (lower is better)
Translates to: VGAASSKAVWEN*PLSLRMPLRWR
Trigger: CCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCTCGCGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp GGAGGGTCCTCCTGTACCCCTTCTGCAGAGGCTGACACCTTCTTCTaGAGAATGCCCTTTGGCAGCTTGAGGTTGCTCTTGCCAGGGCGA +
Preference number: 6 (lower is better)
Translates to: GGSSCTPSAEADTFF*RMPFGSLRLLLPGR
Trigger: TCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAGCCTCTGCAGAAGGGGTACAGGAGGACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp GTGTCACTGTGGAGAGACTGGGCCATGTCATTCTCCTaGCGGGACTTCTTGAGCGAATGCTGGCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VSLWRDWAMSFS*RDFLSECWRSR
Trigger: CCTGGAGCGCCAGCATTCGCTCAAGAAGTCCCGCAAGGAGAATGACATGGCCCAGTCTCTCCACAGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp GCCGCGAGCTCCAAGGCTGTCTGGGAGAACTTGCCATaGAGTTTGAGGATGCCTTTGCGATGGAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: AASSKAVWENLP*SLRMPLRWRSS
Trigger: GCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCTCGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp GAGGCTGACACCTTCTTCTTGAGAATGCCCTTTGGCAGCTTGAGGTaGCTCTTGCCAGGGCGATGGGCAGTGTCATCAGCCGTGTCACTG +
Preference number: 6 (lower is better)
Translates to: EADTFFLRMPFGSLR*LLPGRWAVSSAVSL
Trigger: CAGTGACACGGCTGATGACACTGCCCATCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp TCTGCAGAGGCTGACACCTTCTTCTTGAGAATGCCCTTTGGCAGCTaGAGGTTGCTCTTGCCAGGGCGATGGGCAGTGTCATCAGCCGTG +
Preference number: 6 (lower is better)
Translates to: SAEADTFFLRMPFGS*RLLLPGRWAVSSAV
Trigger: CACGGCTGATGACACTGCCCATCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAGCCTCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp TCCAAGGCTGTCTGGGAGAACTTGCCATTGAGTTTGAGGATGCCTTaGCGATGGAGGAGCAGCCCTGAAGCTTGCGGAGGCTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SKAVWENLPLSLRMP*RWRSSPEACGGFCS
Trigger: GGAGCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS TCA 72 bp CTCCGGAGGGTCCTCCTGTACCCCTTCTGCAGAGGCTaGCACCTTCTTCTTGAGAATGCCCTTTGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: LRRVLLYPFCRG*HLLLENALWQL
Trigger: AAGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAGCCTCTGCAGAAGGGGTACAGGAGGACCCTCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp TGGGCAGTGTCATCAGCCGTGTCACTGTGGAGAGACTaGGCCATGTCATTCTCCTTGCGGGACTTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: WAVSSAVSLWRD*AMSFSLRDFLS
Trigger: GCTCAAGAAGTCCCGCAAGGAGAATGACATGGCCCAGTCTCTCCACAGTGACACGGCTGATGACACTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp GTCTGGGAGAACTTGCCATTGAGTTTGAGGATGCCTTaGCGATGGAGGAGCAGCCCTGAAGCTTGCGGAGGC +
Preference number: 6 (lower is better)
Translates to: VWENLPLSLRMP*RWRSSPEACGG
Trigger: GCCTCCGCAAGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp GACACCTTCTTCTTGAGAATGCCCTTTGGCAGCTTGAGGTTGCTCTaGCCAGGGCGATGGGCAGTGTCATCAGCCGTGTCACTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: DTFFLRMPFGSLRLL*PGRWAVSSAVSLWR
Trigger: TCTCCACAGTGACACGGCTGATGACACTGCCCATCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS TCA 72 bp CAGATCTTGCTCATCTTTGATTTTGTCCTTCCGGATTaGCTTGATGGCCACCAGGCGCCCCGAGCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: QILLIFDFVLPD*LDGHQAPRALP
Trigger: CGGGAGAGCTCGGGGCGCCTGGTGGCCATCAAGTCAATCCGGAAGGACAAAATCAAAGATGAGCAAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CCA 72 bp GAGAACTTGCCATTGAGTTTGAGGATGCCTTTGCGATaGAGGAGCAGCCCTGAAGCTTGCGGAGGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: ENLPLSLRMPLR*RSSPEACGGFC
Trigger: GCAGAAGCCTCCGCAAGCTTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp ACCTTCTTCTTGAGAATGCCCTTTGGCAGCTTGAGGTaGCTCTTGCCAGGGCGATGGGCAGTGTCATCAGCC +
Preference number: 6 (lower is better)
Translates to: TFFLRMPFGSLR*LLPGRWAVSSA
Trigger: GGCTGATGACACTGCCCATCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAAGAAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp GCTGACACCTTCTTCTTGAGAATGCCCTTTGGCAGCTaGAGGTTGCTCTTGCCAGGGCGATGGGCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: ADTFFLRMPFGS*RLLLPGRWAVS
Trigger: TGACACTGCCCATCGCCCTGGCAAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 72 bp CATAGAGGGGGCTCCCACAGAATGTCTGCAGGAACTTaGCTTGATGGTAGAGGTTGGAGAGACCGAAGTCAG +
Preference number: 6 (lower is better)
Translates to: HRGGSHRMSAGT*LDGRGWRDRSQ
Trigger: CTGACTTCGGTCTCTCCAACCTCTACCATCAAGGCAAGTTCCTGCAGACATTCTGTGGGAGCCCCCTCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS GCA 72 bp CTAGGATCTTATGGTCATGCCCATCAAAGGGCATGGTaGCATGCACCAGGATGTAGAGGAGAACACCCAGGG +
Preference number: 6 (lower is better)
Translates to: LGSYGHAHQRAW*HAPGCRGEHPG
Trigger: CCCTGGGTGTTCTCCTCTACATCCTGGTGCATGGCACCATGCCCTTTGATGGGCATGACCATAAGATCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp AGCTCCAAGGCTGTCTGGGAGAACTTGCCATTGAGTTaGAGGATGCCTTTGCGATGGAGGAGCAGCCCTGAA +
Preference number: 6 (lower is better)
Translates to: SSKAVWENLPLS*RMPLRWRSSPE
Trigger: TTCAGGGCTGCTCCTCCATCGCAAAGGCATCCTCAAACTCAATGGCAAGTTCTCCCAGACAGCCTTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp TCCTGTACCCCTTCTGCAGAGGCTGACACCTTCTTCTaGAGAATGCCCTTTGGCAGCTTGAGGTTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: SCTPSAEADTFF*RMPFGSLRLLL
Trigger: CAAGAGCAACCTCAAGCTGCCAAAGGGCATTCTCAAGAAGAAGGTGTCAGCCTCTGCAGAAGGGGTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 90 bp TCAATCTCCCTCCGTATGTGCATCAGATCTTGCTCATCTTTGATTTaGTCCTTCCGGATTGACTTGATGGCCACCAGGCGCCCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: SISLRMCIRSCSSLI*SFRIDLMATRRPEL
Trigger: GAGCTCGGGGCGCCTGGTGGCCATCAAGTCAATCCGGAAGGACAAAATCAAAGATGAGCAAGATCTGATGCACATACGGAGGGAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367157.6
CDS CAA 72 bp CTCCGTATGTGCATCAGATCTTGCTCATCTTTGATTTaGTCCTTCCGGATTGACTTGATGGCCACCAGGCGC +
Preference number: 6 (lower is better)
Translates to: LRMCIRSCSSLI*SFRIDLMATRR
Trigger: GCGCCTGGTGGCCATCAAGTCAATCCGGAAGGACAAAATCAAAGATGAGCAAGATCTGATGCACATACGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367157.6