RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NTSR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101188

Ensembl transcript IDs: ENST00000370501.4, ENST00000482259.1

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATCCTGGCCACGGCCACTCGGGCAGGTGCTGGAGACCAGGCCCCTaGTCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAG +
Preference number: 1 (lower is better)
Translates to: HPGHGHSGRCWRPGP*SGVPSAEPERPQLK
Trigger: CTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCACCTGCCCGAGTGGCCGTGGCCAGGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR TCA 90 bp TTCAACTGCTTGGAGGCCGGGGCCAGGGCTGCCGCCGCCAGAAGGTaGCAAATGAGTCTGTGCCTCAGCCCAGGGCTGCCGGCCAGCGGT +
Preference number: 1 (lower is better)
Translates to: FNCLEAGARAAAARR*QMSLCLSPGLPASG
Trigger: ACCGCTGGCCGGCAGCCCTGGGCTGAGGCACAGACTCATTTGTCACCTTCTGGCGGCGGCAGCCCTGGCCCCGGCCTCCAAGCAGTTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 90 bp CTCGGGCAGGTGCTGGAGACCAGGCCCCTGATCCGGCGTCCCTTCTaGCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCC +
Preference number: 1 (lower is better)
Translates to: LGQVLETRPLIRRPF*RAREATAEDLEAEA
Trigger: GGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCACCTGCCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 90 bp GGCTCCAGACCTCAGCCTGCACAGCCACAAGCAAAGCACACGGAATaGGCACCCCATCCTGGCCACGGCCACTCGGGCAGGTGCTGGAGA +
Preference number: 1 (lower is better)
Translates to: GSRPQPAQPQAKHTE*APHPGHGHSGRCWR
Trigger: TCTCCAGCACCTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGTGGCTGTGCAGGCTGAGGTCTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 90 bp AGGAGGCGCCAGCTTTTTCAACTGCTTGGAGGCCGGGGCCAGGGCTaGCGCCGCCAGAAGGTGACAAATGAGTCTGTGCCTCAGCCCAGG +
Preference number: 1 (lower is better)
Translates to: RRRQLFQLLGGRGQG*RRQKVTNESVPQPR
Trigger: CCTGGGCTGAGGCACAGACTCATTTGTCACCTTCTGGCGGCGGCAGCCCTGGCCCCGGCCTCCAAGCAGTTGAAAAAGCTGGCGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 90 bp GGCCCTGTTTCCCTGGGGTTGGTGGCCCTTGGGCACTGGGAGGGCTaGCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAA +
Preference number: 1 (lower is better)
Translates to: GPVSLGLVALGHWEG*LADDQACGGKVWQE
Trigger: TTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTCCCAGTGCCCAAGGGCCACCAACCCCAGGGAAACAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR TCA 90 bp AGGGCTGCCGGCCAGCGGTGCCTGGACACACCGCTCCTTCTCACCTaGAGCCTGAGTTCCTGGGACCTGGCATCTTACTCAGAGACCAGG +
Preference number: 1 (lower is better)
Translates to: RAAGQRCLDTPLLLT*SLSSWDLASYSETR
Trigger: CCTGGTCTCTGAGTAAGATGCCAGGTCCCAGGAACTCAGGCTTCAGGTGAGAAGGAGCGGTGTGTCCAGGCACCGCTGGCCGGCAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR TCA 90 bp CCGACGCACTCATGGCACGCAGGGCCAGCTTCCGGGGCCACATCATaGCCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTG +
Preference number: 1 (lower is better)
Translates to: PTHSWHAGPASGATS*PGRKLVIRDQVSWV
Trigger: CACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTGGCCCCGGAAGCTGGCCCTGCGTGCCATGAGTGCGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 90 bp CTGTTTCCCTGGGGTTGGTGGCCCTTGGGCACTGGGAGGGCTGCCTaGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGC +
Preference number: 1 (lower is better)
Translates to: LFPWGWWPLGTGRAA*LMTRLVGAKFGRKC
Trigger: GCACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTCCCAGTGCCCAAGGGCCACCAACCCCAGGGAAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR TCA 90 bp CCGGCCAGCGGTGCCTGGACACACCGCTCCTTCTCACCTGAAGCCTaGGTTCCTGGGACCTGGCATCTTACTCAGAGACCAGGCACCATC +
Preference number: 1 (lower is better)
Translates to: PASGAWTHRSFSPEA*VPGTWHLTQRPGTI
Trigger: GATGGTGCCTGGTCTCTGAGTAAGATGCCAGGTCCCAGGAACTCAGGCTTCAGGTGAGAAGGAGCGGTGTGTCCAGGCACCGCTGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 90 bp GCACTCATGGCACGCAGGGCCAGCTTCCGGGGCCACATCATGACCTaGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGTCT +
Preference number: 1 (lower is better)
Translates to: ALMARRASFRGHIMT*PQASDTRSGVVGVS
Trigger: AGACACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTGGCCCCGGAAGCTGGCCCTGCGTGCCATGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 90 bp AGACCCCACGTCTACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTaGCCTCTCTCAGAGCACCATCCTGAGAGACACCATTCTGTCTGT +
Preference number: 1 (lower is better)
Translates to: RPHVYRGSRAVGHPL*PLSEHHPERHHSVC
Trigger: ACAGACAGAATGGTGTCTCTCAGGATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGTAGACGTGGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 90 bp TCTCAGAGCACCATCCTGAGAGACACCATTCTGTCTGTTCCGGGGTaGATCCTCCAGGACAGTCTCATCCAGCTGAGAGGGCGGAACGAC +
Preference number: 1 (lower is better)
Translates to: SQSTILRDTILSVPG*ILQDSLIQLRGRND
Trigger: GTCGTTCCGCCCTCTCAGCTGGATGAGACTGTCCTGGAGGATCCACCCCGGAACAGACAGAATGGTGTCTCTCAGGATGGTGCTCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 90 bp GGGTGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTaGACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTC +
Preference number: 1 (lower is better)
Translates to: GCVCGAWTRVPTYGK*TDRSIKTSTGKADF
Trigger: GAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 90 bp TGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTaGAGATACTGTAGCATTCGACTCTCATTTCTCAGACGGGGAAAC +
Preference number: 1 (lower is better)
Translates to: WGSRNPSTQQPDPSD*RYCSIRLSFLRRGN
Trigger: GTTTCCCCGTCTGAGAAATGAGAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCGTCCCCTCTGGGGGCTaGAGCTGCCTGCGGCGAGGG +
Preference number: 2 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAVPSGG*SCLRRG
Trigger: CCCTCGCCGCAGGCAGCTGCAGCCCCCAGAGGGGAC...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp GCCGTCACCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCCGGGGCCAGGGCTaGCGCCGCCAGAAGGTGACA +
Preference number: 2 (lower is better)
Translates to: AVTRGRLRGSGLHDRRTHGRGQG*RRQKVT
Trigger: TGTCACCTTCTGGCGGCGGCAGCCCTGGCCCCGGCC...ATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGGTGACGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CTCGGGCAGGTGCTGGAGACCAGGCCCCTGATCCGGCGTCCCTTCTGCCGAGCCCAAAGCCACGGAGCCTaGGGGACTGGGGCTGGACTC +
Preference number: 2 (lower is better)
Translates to: LGQVLETRPLIRRPFCRAQSHGA*GTGAGL
Trigger: GAGTCCAGCCCCAGTCCCGCAGGCTCCGTGGCTTTG...GGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCACCTGCCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp GAGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGTGGCCAGGCTCCTCCTaGACACGTTCCGGGGCGCAC +
Preference number: 2 (lower is better)
Translates to: EGVQASEMWTWEQQPGRRWPGSS*TRSGAH
Trigger: GTGCGCCCCGGAACGTGTCCAGGAGGAGCCTGGCCA...CCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCATGCGCACCCCATCCTaGCCACGGCCACTCGGGCAG +
Preference number: 2 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAMRTPS*PRPLGQ
Trigger: CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCAT...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCGGGGGCAAGGACCCATaGCCAGGCTCCTCCTGGACA +
Preference number: 2 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAGGKDP*PGSSWT
Trigger: TGTCCAGGAGGAGCCTGGCCATGGGTCCTTGCCCCC...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCCCATGCTGCGGCGAGGGTGGTaGGAGGGACTCCCCACGGCG +
Preference number: 2 (lower is better)
Translates to: PERPQLKILRLRPEPPPMLRRGW*EGLPTA
Trigger: CGCCGTGGGGAGTCCCTCCCACCACCCTCGCCGCAG...CATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCCCATGTCTGGGGGCTGCAGCTaGCTGCGGCGAGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: PERPQLKILRLRPEPPPMSGGCS*LRRGWW
Trigger: CCACCACCCTCGCCGCAGGCAGCTGCAGCCCCCAGA...CATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCGCAAAGCACACGGAATaGGCACCCCATCCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAAKHTE*APHPGH
Trigger: GTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGC...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCGCTTTTTCAACTGCTTaGAGGCCGGGGCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAAFSTA*RPGPGL
Trigger: CAGCCCTGGCCCCGGCCTCCAAGCAGTTGAAAAAGC...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CAA 90 bp TCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTaGAGGCTGAGGCCTGAGCCCCCTCCCATGTGGTGTCCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SGVPSAEPERPQLKI*RLRPEPPPMWCPGR
Trigger: TCTGCCAGGACACCACATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCCAGAGCCCATTTCCCTaGGGCAAAGGCTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAQSPFP*GKGCSE
Trigger: CTCAGAGCAGCCTTTGCCCCAGGGAAATGGGCTCTG...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCCCATGGTGCAGGCTGGCCTCTaGCTGACCCCCATCAAGGCT +
Preference number: 2 (lower is better)
Translates to: PERPQLKILRLRPEPPPMVQAGL*LTPIKA
Trigger: AGCCTTGATGGGGGTCAGGCAGAGGCCAGCCTGCAC...CATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGATCCGGCGTCCCTTCTaGCGAGCCCGAGAGGCCACA +
Preference number: 2 (lower is better)
Translates to: EGCLADDQACGGKVWQEVIRRPF*RAREAT
Trigger: TGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGAT...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGGGGCCCTGTTCTTGGTaGGCCGAAGGGTCCTGTGGT +
Preference number: 2 (lower is better)
Translates to: EGCLADDQACGGKVWQEVGPCSW*AEGSCG
Trigger: ACCACAGGACCCTTCGGCTCACCAAGAACAGGGCCC...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGCGGAGCCTGCGGGACTaGGGCTGGACTCCCCGAGCT +
Preference number: 2 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRRSLRD*GWTPRA
Trigger: AGCTCGGGGAGTCCAGCCCCAGTCCCGCAGGCTCCG...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGGGCAGGGTCTGCACGTaGGGCCCAAAGCCACGGAGC +
Preference number: 2 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVGRVCT*GPKPRS
Trigger: GCTCCGTGGCTTTGGGCCTCACGTGCAGACCCTGCC...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp TCAGAGCACCATCCTGAGAGACACCATTCTGTCTGTTCCGGGGTGGATCCTCCATGGAGACCAGGCCCCTaGTCCGGCGTCCCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: SEHHPERHHSVCSGVDPPWRPGP*SGVPSA
Trigger: GGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCA...TGGAGGATCCACCCCGGAACAGACAGAATGGTGTCTCTCAGGATGGTGCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTGGGCATGGGTCTGCATaGCAGGGTCTGCACGTGAGG +
Preference number: 2 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPGHGSA*QGLHVR
Trigger: CCTCACGTGCAGACCCTGCCATGCAGACCCATGCCC...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGGGGGTTGGTGGCCCTTaGGCACTGGGAGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVGVGGP*ALGGLP
Trigger: AGGCAGCCCTCCCAGTGCCCAAGGGCCACCAACCCC...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp ACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTGCCCTCTCTCAGAGCACCATCGAGCAGACTATGTCATaGGGGCTCTGTGGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: TEGLGQWGIHSALSQSTIEQTMS*GLCGGG
Trigger: TCCTCCCCCACAGAGCCCCCATGACATAGTCTGCTC...GATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCCCAGCTTGCCAGGCCTaGAGGGGCGAGTCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLPACQA*RGESGS
Trigger: GCTCCCTGACTCGCCCCTTCAGGCCTGGCAAGCTGG...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCCTCCCGGGTGGGGGCTaGTCTGTCTGTCGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLLPGGG*SVCRGQ
Trigger: TTGCCCCCGACAGACAGAGCAGCCCCCACCCGGGAG...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGGGCCCTTTTCCTATCTaGGAGAGGAGCGCTCTCTTG +
Preference number: 2 (lower is better)
Translates to: EGCLADDQACGGKVWQEVGPFPI*ERSALL
Trigger: CAAGAGAGCGCTCCTCTCCCAGATAGGAAAAGGGCC...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGGTCAGGGAGCTTTCTTaGAGCTGCCTGGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRVRELS*SCLGEG
Trigger: CCCCTCCCCCAGGCAGCTCCAAGAAAGCTCCCTGAC...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp GGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGGGAGGAGGGGAGGCTaGGGTCTGGGCCATTCCAGG +
Preference number: 2 (lower is better)
Translates to: GTRQLNSQIQATADTVAFGRRGG*GLGHSR
Trigger: CCTGGAATGGCCCAGACCCCAGCCTCCCCTCCTCCC...GAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCGGTCCTGGGTCGACATaGCCGGTGCAGGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLGPGST*PVQAAS
Trigger: GCTGGCTGCCTGCACCGGCCATGTCGACCCAGGACC...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp TCAGAGCACCATCCTGAGAGACACCATTCTGTCTGTTCCGGGGTGGATCCTCCAAGCAGGGGTAGGGGCTaGACTGACCTCTGGACATCC +
Preference number: 2 (lower is better)
Translates to: SEHHPERHHSVCSGVDPPSRGRG*TDLWTS
Trigger: GGATGTCCAGAGGTCAGTGCAGCCCCTACCCCTGCT...TGGAGGATCCACCCCGGAACAGACAGAATGGTGTCTCTCAGGATGGTGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp AGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCTCATTTCTCAGACTGCCTGCGGCGAGGGTaGTGGGAGGGACTCCCCACG +
Preference number: 2 (lower is better)
Translates to: SQIQATADTVAFDSHFSDCLRRG*WEGLPT
Trigger: CGTGGGGAGTCCCTCCCACCACCCTCGCCGCAGGCA...GTCTGAGAAATGAGAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACGCTTGTGGTCCCCTCTaGGGGCTGCAGCTGCCTGCG +
Preference number: 2 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHACGPL*GLQLPA
Trigger: CGCAGGCAGCTGCAGCCCCCAGAGGGGACCACAAGC...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACGTGGCTCCCAGCTCCTaGCTGGTCCCGGCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHVAPSS*LVPASF
Trigger: GAAGCTGGCCGGGACCAGCCAGGAGCTGGGAGCCAC...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp ACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTGCCCTCTCTCAGAGCACCATCTGTGGGGGCAAAGTTTaGCAGGAAGTGCAGCGAATA +
Preference number: 2 (lower is better)
Translates to: TEGLGQWGIHSALSQSTICGGKV*QEVQRI
Trigger: TATTCGCTGCACTTCCTGCCAAACTTTGCCCCCACA...GATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp AGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGAAACCATCCATTAGTCTaGGAACAAAGAAAACTGCCT +
Preference number: 2 (lower is better)
Translates to: RGCRPQRCGHGNSSRAAGNHPLV*EQRKLP
Trigger: AGGCAGTTTTCTTTGTTCTCAGACTAATGGATGGTT...TCCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp CGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCACCACCTGCAGATGGTCCCCAGAGAAGGGTCTaGGGCTGCCCTGTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: RPPLLRDTRGLFSPPADGPQRRV*GCPVWL
Trigger: GAGCCAGACAGGGCAGCCTCAGACCCTTCTCTGGGG...ACCATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGGAAAAGGCTGACTTTTaGTTCCTGTGGCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: EGCLADDQACGGKVWQEVEKADF*FLWLPA
Trigger: AGCTGGGAGCCACAGGAAGCAAAAGTCAGCCTTTTC...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCACCACCTGCAGATGGTGGGCACTGGGAGGGCTaGCTGGCTGATGACCAGGCT +
Preference number: 2 (lower is better)
Translates to: RPPLLRDTRGLFSPPADGGHWEG*LADDQA
Trigger: AGCCTGGTCATCAGCCAGGCAGCCCTCCCAGTGCCC...ACCATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGCTCCAGACCTCAGCCTaGACAGCCACAAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVLQTSA*TATSKA
Trigger: TGCTTTGCTTGTGGCTGTGCAGGCTGAGGTCTGGAG...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp ACCTCAGCCTGCACAGCCACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGAGCGCTCTCTTGTTCTaGCTTTCAAAGAGGAGATGG +
Preference number: 2 (lower is better)
Translates to: TSACTATSKAHGMRTPSWSALLF*LSKRRW
Trigger: CCATCTCCTCTTTGAAAGCCAGAACAAGAGAGCGCT...CCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGTGGCTGTGCAGGCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCTCAGAGATGTGGACATaGGAACAGCAGCCGGGCCGC +
Preference number: 2 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLSEMWT*EQQPGR
Trigger: GCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGA...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGGTGCTCTGTGGAGCCTaGATCCTAGAGACCAAGGAG +
Preference number: 2 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRVLCGA*ILETKE
Trigger: CTCCTTGGTCTCTAGGATCCAGGCTCCACAGAGCAC...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCGCTAGACAGAGGGGGTaGAGGCCTCAGAGATGTGGA +
Preference number: 2 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLARQRG*RPQRCG
Trigger: TCCACATCTCTGAGGCCTGCACCCCCTCTGTCTAGC...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCCCTGGGGCAAAGGCTaGTCTGAGACAGGGAAATCC +
Preference number: 2 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDPWGKG*SETGKS
Trigger: GGATTTCCCTGTCTCAGAGCAGCCTTTGCCCCAGGG...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGAGCCGAAGGGTCCTGTaGTTGGAGAGGGATTTTGTG +
Preference number: 2 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVSRRVL*LERDFV
Trigger: CACAAAATCCCTCTCCAACCACAGGACCCTTCGGCT...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACCTGGACATCCCTGGCTaGCAGCAAAGCTCTTCCGCC +
Preference number: 2 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHLDIPG*QQSSSA
Trigger: GGCGGAAGAGCTTTGCTGCCAGCCAGGGATGTCCAG...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCTTCTCACCTGAAGCCTaGGTTCCTGGGACCTGGCAT +
Preference number: 2 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLFSPEA*VPGTWH
Trigger: ATGCCAGGTCCCAGGAACTCAGGCTTCAGGTGAGAA...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp TTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTGCACCAGAAGGTGACAAATaGGTCTGTGCCTCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: FCGVQGTRQLNSQIQATAPEGDK*VCASAQ
Trigger: CTGGGCTGAGGCACAGACTCATTTGTCACCTTCTGG...TGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp AGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCTCATTTCTCAGACGCCAGCTTTTTCAACTaGTTGGAGGCCGGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SQIQATADTVAFDSHFSDASFFN*LEAGAR
Trigger: CCTGGCCCCGGCCTCCAAGCAGTTGAAAAAGCTGGC...GTCTGAGAAATGAGAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGTGGAGAGGGATTTTGTaGGGTTCAAGGAACCCGTCA +
Preference number: 2 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRWRGIL*GSRNPS
Trigger: TGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCA...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR TCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCCTCAGACGGGGAAACTaGGTCCAGAGAAGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLLRRGN*VQRRQS
Trigger: ACTTTGCCTTCTCTGGACTCAGTTTCCCCGTCTGAG...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CCA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCCATCTGTTCCTTAGATaGGGAAACCGAGGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: PHRGPSATFIERYTGFVFHLFLR*GNRGSE
Trigger: TTCTGAGCCTCGGTTTCCCCATCTAAGGAACAGATG...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp CGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCACCACCTGCAGATGGTCCTACCTACGGTAAGTaGACAGATAGGAGCATCAAG +
Preference number: 2 (lower is better)
Translates to: RPPLLRDTRGLFSPPADGPTYGK*TDRSIK
Trigger: CTTGATGCTCCTATCTGTGCACTTACCGTAGGTAGG...ACCATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR GCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACAAGAAAACTGCCTTTTaGCGCACACTAATTTCTCCT +
Preference number: 2 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHKKTAF*RTLISP
Trigger: AGGAGAAATTAGTGTGCGGCAAAAGGCAGTTTTCTT...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR TCA 72 bp CACGGCCACTCGGGCAGGTGCTGGAGACCAGGCCCCTaGTCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: HGHSGRCWRPGP*SGVPSAEPERP
Trigger: TGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCACCTGCCCGAGTGGCCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR TCA 72 bp CGTCACCAGGGGCCGGCTCAGGGGCTCCGGACTCCATaGCCGACGCACTCATGGCACGCAGGGCCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: RHQGPAQGLRTP*PTHSWHAGPAS
Trigger: GGAAGCTGGCCCTGCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGGTGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CAA 90 bp CCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCCCACAGCTGAAGATCTaGAGGCTGAGGCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: PGAGSGAPDSMTDALMARPQLKI*RLRPEP
Trigger: GGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGG...GCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 72 bp CCTCAGCCTGCACAGCCACAAGCAAAGCACACGGAATaGGCACCCCATCCTGGCCACGGCCACTCGGGCAGG +
Preference number: 3 (lower is better)
Translates to: PQPAQPQAKHTE*APHPGHGHSGR
Trigger: CCTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGTGGCTGTGCAGGCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 72 bp TGGCTGAACACAGCCCAAGACCAGGTGTCCGGGTCCTaGGTCGACATGGCCGGTGCAGGCAGCCAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: WLNTAQDQVSGS*VDMAGAGSQPR
Trigger: TCTGGGCTGGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTGTGTTCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 72 bp GTGCTGGAGACCAGGCCCCTGATCCGGCGTCCCTTCTaGCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAG +
Preference number: 3 (lower is better)
Translates to: VLETRPLIRRPF*RAREATAEDLE
Trigger: CTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 72 bp TGGGGTTGGTGGCCCTTGGGCACTGGGAGGGCTGCCTaGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGC +
Preference number: 3 (lower is better)
Translates to: WGWWPLGTGRAA*LMTRLVGAKFG
Trigger: GCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTCCCAGTGCCCAAGGGCCACCAACCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CAA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGCGATGGGCCCCCAGCTaGCCAGGCCTGAAGGGGCGA +
Preference number: 3 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVRWAPS*PGLKGR
Trigger: TCGCCCCTTCAGGCCTGGCAAGCTGGGGGCCCATCG...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 72 bp GTCTACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTaGCCTCTCTCAGAGCACCATCCTGAGAGACACCAT +
Preference number: 3 (lower is better)
Translates to: VYRGSRAVGHPL*PLSEHHPERHH
Trigger: ATGGTGTCTCTCAGGATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGTAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 72 bp TGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTaGCAGGAAGTGCAGCGAATAGGCCTGACTCCCCTG +
Preference number: 3 (lower is better)
Translates to: CLADDQACGGKV*QEVQRIGLTPL
Trigger: CAGGGGAGTCAGGCCTATTCGCTGCACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 72 bp CCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTaGGTGTGTCTGTGGTGCGTGGACACGTGTCCCTAC +
Preference number: 3 (lower is better)
Translates to: PGRKLVIRDQVS*VCLWCVDTCPY
Trigger: GTAGGGACACGTGTCCACGCACCACAGACACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR TCA 72 bp GGTGCCTGGACACACCGCTCCTTCTCACCTGAAGCCTaGGTTCCTGGGACCTGGCATCTTACTCAGAGACCA +
Preference number: 3 (lower is better)
Translates to: GAWTHRSFSPEA*VPGTWHLTQRP
Trigger: TGGTCTCTGAGTAAGATGCCAGGTCCCAGGAACTCAGGCTTCAGGTGAGAAGGAGCGGTGTGTCCAGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 72 bp ACCATCCTGAGAGACACCATTCTGTCTGTTCCGGGGTaGATCCTCCAGGACAGTCTCATCCAGCTGAGAGGG +
Preference number: 3 (lower is better)
Translates to: TILRDTILSVPG*ILQDSLIQLRG
Trigger: CCCTCTCAGCTGGATGAGACTGTCCTGGAGGATCCACCCCGGAACAGACAGAATGGTGTCTCTCAGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CAA 90 bp CCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCCCATGCACACTAATTTCTCCTaGTTAGAGGCCCTTTTCCTA +
Preference number: 3 (lower is better)
Translates to: PERPQLKILRLRPEPPPMHTNFS*LEALFL
Trigger: TAGGAAAAGGGCCTCTAACAAGGAGAAATTAGTGTG...CATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CAA 90 bp CGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCAAAGAAAACTGCCTTTaGCCGCACACTAATTTCTCC +
Preference number: 3 (lower is better)
Translates to: RPFCRAREATAEDLEAEAKENCL*PHTNFS
Trigger: GGAGAAATTAGTGTGCGGCAAAAGGCAGTTTTCTTT...GGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CCA 72 bp TACGAGATCAGGTGTCGTGGGTGTGTCTGTGGTGCGTaGACACGTGTCCCTACCTACGGTAAGTGCACAGAT +
Preference number: 3 (lower is better)
Translates to: YEIRCRGCVCGA*TRVPTYGKCTD
Trigger: ATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACACCCACGACACCTGATCTCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CAA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGGAGAGGAGCGCTCTCTaGTTCTGGCTTTCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVERSAL*FWLSKR
Trigger: CCTCTTTGAAAGCCAGAACAAGAGAGCGCTCCTCTC...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 72 bp TGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTaGACAGATAGGAGCATCAAGACATCAACGGGAAAA +
Preference number: 3 (lower is better)
Translates to: CGAWTRVPTYGK*TDRSIKTSTGK
Trigger: TTTTCCCGTTGATGTCTTGATGCTCCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CAA 90 bp AGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCTCATTTCTCAGACCAGGCCAGCCCATTTTaGTCCTTTTTGGGCTTGTGG +
Preference number: 3 (lower is better)
Translates to: SQIQATADTVAFDSHFSDQASPF*SFLGLW
Trigger: CCACAAGCCCAAAAAGGACAAAAATGGGCTGGCCTG...GTCTGAGAAATGAGAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR GCA 72 bp AGGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTaGAGATACTGTAGCATTCGACTCTCATTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: RNPSTQQPDPSD*RYCSIRLSFLR
Trigger: TCTGAGAAATGAGAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR-3UTR CAA 90 bp AGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCTCATTTCTCAGACAGACAGGGAAATCCCTaGAAGAAAAGGCTGACTTTT +
Preference number: 3 (lower is better)
Translates to: SQIQATADTVAFDSHFSDRQGNP*KKRLTF
Trigger: AAAAGTCAGCCTTTTCTTCAAGGGATTTCCCTGTCT...GTCTGAGAAATGAGAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CTCGGGCAGGTGCTGGAGACCAGGCCCCTGATCCGGCGTCCCTTCTGCCGAGCCTCAGGCTGGCCACGTTaGGGGCCGTGGCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGQVLETRPLIRRPFCRASGWPR*GPWRRC
Trigger: GCACCTACGCCACGGCCCTCAACGTGGCCAGCCTGA...GGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCACCTGCCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GAGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGCCGTGCCGCAGGGCCTaGACCCTGCCAGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: EGVQASEMWTWEQQPGRRPCRRA*TLPGSM
Trigger: CATCGAGCCTGGCAGGGTCCAGGCCCTGCGGCACGG...CCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCTGGAGACCAGGCCCCTaGTCCGGCGTCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAWRPGP*SGVPSA
Trigger: GGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCA...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCCGTTGCCCGAAGCGTTaGCGAAGCCCGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAARCPKR*RSPGPA
Trigger: TGCTGGCCCCGGGCTTCGGCAACGCTTCGGGCAACG...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp ACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCACGGCCACTCGGGCAGCCGGCGCGGAGCTGTTaGGGCGCATGGTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TSKAHGMRTPSWPRPLGQPARSC*GAWWAL
Trigger: CAGCGCCCACCATGCGCCTCAACAGCTCCGCGCCGG...CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp AGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGACCAGCTTGCCAGGCCTaGAGGGGCGAGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGCRPQRCGHGNSSRAAGPACQA*RGESGS
Trigger: GCTCCCTGACTCGCCCCTTCAGGCCTGGCAAGCTGG...TCCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GGGCATGGGTCTGCATGGCAGGGTCTGCACGTGAGGCCCAAAGCCACGGAGCCTCGTCCAGCTCGCTGCTaGGTGCCGCCAGGACGCGCT +
Preference number: 4 (lower is better)
Translates to: GHGSAWQGLHVRPKATEPRPARC*VPPGRA
Trigger: AGCGCGTCCTGGCGGCACCCAGCAGCGAGCTGGACG...AGGCTCCGTGGCTTTGGGCCTCACGTGCAGACCCTGCCATGCAGACCCATGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCCTGCGGGACTGGGGCTaGACTCCCCGAGCTAGACAG +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAALRDWG*TPRARQ
Trigger: CTGTCTAGCTCGGGGAGTCCAGCCCCAGTCCCGCAG...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCAGGGCCAGCTTCTGCCTGCGGCGAGGGTaGTGGGAGGGACTCCCCACG +
Preference number: 4 (lower is better)
Translates to: SGAPDSMTDALMARRASFCLRRG*WEGLPT
Trigger: CGTGGGGAGTCCCTCCCACCACCCTCGCCGCAGGCA...GAAGCTGGCCCTGCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCGAGCCCCCTCCCATGTaGTGTCCTGGCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAEPPPM*CPGRAP
Trigger: AGGGGCTCTGCCAGGACACCACATGGGAGGGGGCTC...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CTCGGGCAGGTGCTGGAGACCAGGCCCCTGATCCGGCGTCCCTTCTGCCGAGCCGCCGCCGCCAGAAGGTaGCAAATGAGTCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LGQVLETRPLIRRPFCRAAAARR*QMSLCL
Trigger: GAGGCACAGACTCATTTGTCACCTTCTGGCGGCGGC...GGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCACCTGCCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp TCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCAGGGCCAGCTTCCGCGCTCCGACGCGTTaGCCGAAGCGTTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SGAPDSMTDALMARRASFRAPTR*PKRCRS
Trigger: GCTTCGGCAACGCTTCGGGCAACGCGTCGGAGCGCG...GAAGCTGGCCCTGCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GCCGTCACCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATAGGAAGGCCCCTCTGTaGTGGCCCTGTTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVTRGRLRGSGLHDRRTHRKAPL*WPCFPG
Trigger: CCCAGGGAAACAGGGCCAGCACAGAGGGGCCTTCCT...ATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGGTGACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCCCTGATCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTCGGAGCCTGCGGGACTaGGGCTGGACTCCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PLIRRPFCRAREATAEDLRSLRD*GWTPRA
Trigger: AGCTCGGGGAGTCCAGCCCCAGTCCCGCAGGCTCCG...AAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GTGGGGGCTGCTCTGTCTGTCGGGGGCAAGGACCCATGGCCAGGCTCCTCCTGGGGGCATGGGTCTGCATaGCAGGGTCTGCACGTGAGG +
Preference number: 4 (lower is better)
Translates to: VGAALSVGGKDPWPGSSWGHGSA*QGLHVR
Trigger: CCTCACGTGCAGACCCTGCCATGCAGACCCATGCCC...CCAGGAGGAGCCTGGCCATGGGTCCTTGCCCCCGACAGACAGAGCAGCCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCCCTGATCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGACTCCCCACGGCGATaGGCCCCCAGCTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLIRRPFCRAREATAEDLDSPRR*APSLPG
Trigger: GCCTGGCAAGCTGGGGGCCCATCGCCGTGGGGAGTC...AAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CTCGGGCAGGTGCTGGAGACCAGGCCCCTGATCCGGCGTCCCTTCTGCCGAGCCGGTGGTGCACCCAGATaGAGTTGTACAGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: LGQVLETRPLIRRPFCRAGGAPR*SCTAPR
Trigger: CCGTGGAGCTGTACAACTTCATCTGGGTGCACCACC...GGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCACCTGCCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCCCATGTCACGTCCAGCTCGCTaGTGGGTGCCGCCAGGACGC +
Preference number: 4 (lower is better)
Translates to: PERPQLKILRLRPEPPPMSRPAR*WVPPGR
Trigger: GCGTCCTGGCGGCACCCAGCAGCGAGCTGGACGTGA...CATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGGCATGGGTCTGCATGGCAGGGTCTGCACGTGAGGCCCAAAGCCACGGAGCCTACGCCGTCACCGTGTTaGCCACCGTGCCCACCACGA +
Preference number: 4 (lower is better)
Translates to: GHGSAWQGLHVRPKATEPTPSPC*PPCPPR
Trigger: TCGTGGTGGGCACGGTGGGCAACACGGTGACGGCGT...AGGCTCCGTGGCTTTGGGCCTCACGTGCAGACCCTGCCATGCAGACCCATGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGGCATGGGTCTGCATGGCAGGGTCTGCACGTGAGGCCCAAAGCCACGGAGCCTATCCGGCGTCCCTTCTaGCGAGCCCGAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: GHGSAWQGLHVRPKATEPIRRPF*RAREAT
Trigger: TGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGAT...AGGCTCCGTGGCTTTGGGCCTCACGTGCAGACCCTGCCATGCAGACCCATGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCACGGCCACTCGGGCAGAAGTCCGGGCAGGAGTaGGCGCGTCTCAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TSKAHGMRTPSWPRPLGQKSGQE*ARLRRG
Trigger: TCCCCGCCTGAGACGCGCCCACTCCTGCCCGGACTT...CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCACGGCCACTCGGGCAGCCCTGCTCGGCCGCCTaGCGTACCATGACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TSKAHGMRTPSWPRPLGQPCSAA*RTMTVS
Trigger: GCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGG...CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCACAGCGTCTCGCGGGTaGCATTGCTGGAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAATASRG*HCWRGC
Trigger: ACACCCTCTCCAGCAATGCCACCCGCGAGACGCTGT...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GAGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGTCAGAGATGTGGACATaGGAACAGCAGCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: EGVQASEMWTWEQQPGRRSEMWT*EQQPGR
Trigger: GCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGA...CCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCGTGGCTCCCAGCTCCTaGCTGGTCCCGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RPFCRAREATAEDLEAEAVAPSS*LVPASF
Trigger: GAAGCTGGCCGGGACCAGCCAGGAGCTGGGAGCCAC...GGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCAAGGCCCCTCTGTGCTaGCCCTGTTTCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAKAPLC*PCFPGV
Trigger: AACCCCAGGGAAACAGGGCCAGCACAGAGGGGCCTT...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GCCGTCACCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATCTGGACATCCCTGGCTaGCAGCAAAGCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: AVTRGRLRGSGLHDRRTHLDIPG*QQSSSA
Trigger: GGCGGAAGAGCTTTGCTGCCAGCCAGGGATGTCCAG...ATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGGTGACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GTGGGGGCTGCTCTGTCTGTCGGGGGCAAGGACCCATGGCCAGGCTCCTCCTGGTGCAGATGGTGGGAGTaGGGGTGGGCGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VGAALSVGGKDPWPGSSWCRWWE*GWAFEL
Trigger: CAGCTCAAACGCCCACCCCCACTCCCACCATCTGCA...CCAGGAGGAGCCTGGCCATGGGTCCTTGCCCCCGACAGACAGAGCAGCCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTCTTCCGCGCCAGCGTaGACGCCGTCACCGTGTTGC +
Preference number: 4 (lower is better)
Translates to: RPFCRAREATAEDLEAEASSAPA*TPSPCC
Trigger: GCAACACGGTGACGGCGTTCACGCTGGCGCGGAAGA...GGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp TCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCAGGGCCAGCTTCTCGGCGCTGCGGTTCTaGTCGCCCATGGTGAACAGC +
Preference number: 4 (lower is better)
Translates to: SGAPDSMTDALMARRASFSALRF*SPMVNS
Trigger: GCTGTTCACCATGGGCGAGCAGAACCGCAGCGCCGA...GAAGCTGGCCCTGCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp TCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCAGGGCCAGCTTCGTGCAGGCTGGCCTCTaGCTGACCCCCATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SGAPDSMTDALMARRASFVQAGL*LTPIKA
Trigger: AGCCTTGATGGGGGTCAGGCAGAGGCCAGCCTGCAC...GAAGCTGGCCCTGCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCGCTAGACAGAGGGGGTaGAGGCCTCAGAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAARQRG*RPQRCG
Trigger: TCCACATCTCTGAGGCCTGCACCCCCTCTGTCTAGC...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACCTCAGCCTGCACAGCCACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGTCTGGGGGCTGCAGCTaGCTGCGGCGAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSACTATSKAHGMRTPSWSGGCS*LRRGWW
Trigger: CCACCACCCTCGCCGCAGGCAGCTGCAGCCCCCAGA...CCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGTGGCTGTGCAGGCTGAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTGTCCCCTCTGGGGGCTaGAGCTGCCTGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPVPSGG*SCLRRG
Trigger: CCCTCGCCGCAGGCAGCTGCAGCCCCCAGAGGGGAC...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp AGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGAGCCAGCTTTTTCAACTaGTTGGAGGCCGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGCRPQRCGHGNSSRAAGASFFN*LEAGAR
Trigger: CCTGGCCCCGGCCTCCAAGCAGTTGAAAAAGCTGGC...TCCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCACGGCCACTCGGGCAGGGGCACTGGGAGGGCTaGCTGGCTGATGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSKAHGMRTPSWPRPLGQGHWEG*LADDQA
Trigger: AGCCTGGTCATCAGCCAGGCAGCCCTCCCAGTGCCC...CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCTGGGTGTGTCTGTGGTaGGTGGACACGTGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAWVCLW*VDTCPY
Trigger: GTAGGGACACGTGTCCACGCACCACAGACACACCCA...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCGGGGGCAAGGACCCATaGCCAGGCTCCTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: RPFCRAREATAEDLEAEAGGKDP*PGSSWT
Trigger: TGTCCAGGAGGAGCCTGGCCATGGGTCCTTGCCCCC...GGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCAGGGCCAGCTTCGTCAGGGAGCTTTCTTaGAGCTGCCTGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGAPDSMTDALMARRASFVRELS*SCLGEG
Trigger: CCCCTCCCCCAGGCAGCTCCAAGAAAGCTCCCTGAC...GAAGCTGGCCCTGCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCTTCTCACCTGAAGCCTaGGTTCCTGGGACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAAFSPEA*VPGTWH
Trigger: ATGCCAGGTCCCAGGAACTCAGGCTTCAGGTGAGAA...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp GCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTTGCCCTGTCTGGCTCTaGGTCCAGGTCCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: AEPERPQLKILRLRPEPPCPVWL*VQVLVQ
Trigger: CTGAACGAGGACCTGGACTCAGAGCCAGACAGGGCA...AGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGGTGGGGGTGGGCGTTTaGGCTGTGAGGGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: EGCLADDQACGGKVWQEVVGVGV*AVRAVP
Trigger: CGGCACAGCCCTCACAGCTCAAACGCCCACCCCCAC...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCCCATGGCCACGGGTTCCAGGTaGCTCCGATCTCCAAACCGC +
Preference number: 4 (lower is better)
Translates to: PERPQLKILRLRPEPPPMATGSR*LRSPNR
Trigger: GCGGTTTGGAGATCGGAGGCACCTGGAACCCGTGGC...CATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGGCAGGGCCTGGACCCTaGCAGGCTCGATGGCCATGC +
Preference number: 4 (lower is better)
Translates to: EGCLADDQACGGKVWQEVAGPGP*QARWPC
Trigger: GCATGGCCATCGAGCCTGGCAGGGTCCAGGCCCTGC...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTGCAAAGCACACGGAATaGGCACCCCATCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AEPERPQLKILRLRPEPPAKHTE*APHPGH
Trigger: GTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGC...AGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTGCGCATGGTGGGCGCTaGAGTCCGCGGCTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPAHGGR*SPRLCP
Trigger: CGGACAGAGCCGCGGACTCCAGCGCCCACCATGCGC...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCCCATGCGCGGGTGGCATTGCTaGAGAGGGTGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PERPQLKILRLRPEPPPMRGWHC*RGCGCW
Trigger: CCAGCAACCACACCCTCTCCAGCAATGCCACCCGCG...CATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GTGGGGGCTGCTCTGTCTGTCGGGGGCAAGGACCCATGGCCAGGCTCCTCCTGGGTGCTCTGTGGAGCCTaGATCCTAGAGACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VGAALSVGGKDPWPGSSWVLCGA*ILETKE
Trigger: CTCCTTGGTCTCTAGGATCCAGGCTCCACAGAGCAC...CCAGGAGGAGCCTGGCCATGGGTCCTTGCCCCCGACAGACAGAGCAGCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCTCAGCCTGCACAGCCACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGGGTCCTGGGTCGACATaGCCGGTGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSACTATSKAHGMRTPSWGPGST*PVQAAS
Trigger: GCTGGCTGCCTGCACCGGCCATGTCGACCCAGGACC...CCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGTGGCTGTGCAGGCTGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCACGGCCACTCGGGCAGTTCACCACCTGCAGATaGTGGGAGTGGGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: TSKAHGMRTPSWPRPLGQFTTCR*WEWGWA
Trigger: CGCCCACCCCCACTCCCACCATCTGCAGGTGGTGAA...CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
3UTR CAA 72 bp CCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTaGAGGCTGAGGCCTGAGCCCCCTCCCATGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PSAEPERPQLKI*RLRPEPPPMWC
Trigger: ACACCACATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp TACGAGATCAGGTGTCGTGGGTGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTGGCCAGCAGCAGGGTaGGCAGGTCGGACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: YEIRCRGCVCGAWTRVPTWPAAG*AGRTAP
Trigger: TGGCGCTGTCCGACCTGCTCACCCTGCTGCTGGCCA...GGTAGGGACACGTGTCCACGCACCACAGACACACCCACGACACCTGATCTCGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGGGGCCCTGTTCTTGGTaGGCCGAAGGGTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PSAEPERPQLKILRLRPEGPCSW*AEGSCG
Trigger: ACCACAGGACCCTTCGGCTCACCAAGAACAGGGCCC...CTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CACCATCCTGAGAGACACCATTCTGTCTGTTCCGGGGTGGATCCTCCAGGACAGGCTGGCCGTCGGCGCTaGGGTTCTGCTCGCCCATGG +
Preference number: 4 (lower is better)
Translates to: HHPERHHSVCSGVDPPGQAGRRR*GSARPW
Trigger: CCATGGGCGAGCAGAACCGCAGCGCCGACGGCCAGC...CTGTCCTGGAGGATCCACCCCGGAACAGACAGAATGGTGTCTCTCAGGATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTGTGCACACTTGGCCCTaGTCGGCCGCCTGGCGTACC +
Preference number: 4 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPVHTWP*SAAWRT
Trigger: GGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCAC...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACCTCAGCCTGCACAGCCACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCAAAGCCACGGAGCCTaGGGGACTGGGGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: TSACTATSKAHGMRTPSWQSHGA*GTGAGL
Trigger: GAGTCCAGCCCCAGTCCCGCAGGCTCCGTGGCTTTG...CCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGTGGCTGTGCAGGCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCACGGCCACTCGGGCAGTTGACGGTGGCAGTGTaGATGGTGGGGGTGCACACC +
Preference number: 4 (lower is better)
Translates to: TSKAHGMRTPSWPRPLGQLTVAV*MVGVHT
Trigger: GGTGTGCACCCCCACCATCCACACTGCCACCGTCAA...CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTGGGAGGAGGGGAGGCTaGGGTCTGGGCCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPGRRGG*GLGHSR
Trigger: CCTGGAATGGCCCAGACCCCAGCCTCCCCTCCTCCC...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCACGGCCACTCGGGCAGACTGGGAGGGCTGCCTaGCTGATGACCAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: TSKAHGMRTPSWPRPLGQTGRAA*LMTRLV
Trigger: CACAAGCCTGGTCATCAGCCAGGCAGCCCTCCCAGT...CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp TACGAGATCAGGTGTCGTGGGTGTGTCTGTGGTGCGTGGACACGTGTCCCTACCCCCCAGAGAAGGGTCTaGGGCTGCCCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YEIRCRGCVCGAWTRVPTPQRRV*GCPVWL
Trigger: GAGCCAGACAGGGCAGCCTCAGACCCTTCTCTGGGG...GGTAGGGACACGTGTCCACGCACCACAGACACACCCACGACACCTGATCTCGTA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGCAGCTCGCTGCTGGGTaGCGCCAGGACGCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRQLAAG*RQDALR
Trigger: TCGGAGCGCGTCCTGGCGGCACCCAGCAGCGAGCTG...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTCCGTGTTGCCCACCGTaGCCACCACGAAGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPPCCPP*PPRRAP
Trigger: TGGCGCTCTTCGTGGTGGGCACGGTGGGCAACACGG...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTGCCCTCTCTCAGAGCACCATCAGAGGCAGGCCAGTGTaGCCAGGAAGATGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: TEGLGQWGIHSALSQSTIRGRPV*PGRCGG
Trigger: TCCGCCACATCTTCCTGGCCACACTGGCCTGCCTCT...GATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTGCCCTCTCTCAGAGCACCATCAGAGGGTGTGGTTGCTaGACACGCTGTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TEGLGQWGIHSALSQSTIRGCGC*TRCRPS
Trigger: GGAAGGCCGACAGCGTGTCCAGCAACCACACCCTCT...GATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCACGGCCACTCGGGCAGCAGGCCTCAGAGATGTaGACATGGGAACAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TSKAHGMRTPSWPRPLGQQASEM*TWEQQP
Trigger: CGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTG...CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTGCCCTCTCTCAGAGCACCATCGCTTTTTCAACTGCTTaGAGGCCGGGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TEGLGQWGIHSALSQSTIAFSTA*RPGPGL
Trigger: CAGCCCTGGCCCCGGCCTCCAAGCAGTTGAAAAAGC...GATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GGGCATGGGTCTGCATGGCAGGGTCTGCACGTGAGGCCCAAAGCCACGGAGCCTTGTGTCTGTGGTGCGTaGACACGTGTCCCTACCTAC +
Preference number: 4 (lower is better)
Translates to: GHGSAWQGLHVRPKATEPCVCGA*TRVPTY
Trigger: GTAGGTAGGGACACGTGTCCACGCACCACAGACACA...AGGCTCCGTGGCTTTGGGCCTCACGTGCAGACCCTGCCATGCAGACCCATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp GGGCATGGGTCTGCATGGCAGGGTCTGCACGTGAGGCCCAAAGCCACGGAGCCTTCAGCTTGTTGGCGATaGTGGTGTTCAGGACCGAGA +
Preference number: 4 (lower is better)
Translates to: GHGSAWQGLHVRPKATEPSACWR*WCSGPR
Trigger: TCTCGGTCCTGAACACCATCATCGCCAACAAGCTGA...AGGCTCCGTGGCTTTGGGCCTCACGTGCAGACCCTGCCATGCAGACCCATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp ACCTCAGCCTGCACAGCCACAAGCAAAGCACACGGAATGCGCACCCCATCCTGGCCGCTCCTTCTCACCTaGAGCCTGAGTTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: TSACTATSKAHGMRTPSWPLLLT*SLSSWD
Trigger: GTCCCAGGAACTCAGGCTTCAGGTGAGAAGGAGCGG...CCAGGATGGGGTGCGCATTCCGTGTGCTTTGCTTGTGGCTGTGCAGGCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CCCCTGATCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTCCAGAAGGTGACAAATaGGTCTGTGCCTCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLIRRPFCRAREATAEDLPEGDK*VCASAQ
Trigger: CTGGGCTGAGGCACAGACTCATTTGTCACCTTCTGG...AAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp TCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCAGGGCCAGCTTCCTCAGAGCACCATCCTaGGAGACACCATTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SGAPDSMTDALMARRASFLRAPS*ETPFCL
Trigger: CAGACAGAATGGTGTCTCTCAGGATGGTGCTCTGAG...GAAGCTGGCCCTGCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CACCATCCTGAGAGACACCATTCTGTCTGTTCCGGGGTGGATCCTCCAGGACAGCGGACAGCGCCAGGCTaGCCAGGTGGTAATGCACCG +
Preference number: 4 (lower is better)
Translates to: HHPERHHSVCSGVDPPGQRTAPG*PGGNAP
Trigger: CGGTGCATTACCACCTGGGCAGCCTGGCGCTGTCCG...CTGTCCTGGAGGATCCACCCCGGAACAGACAGAATGGTGTCTCTCAGGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATGGCCGGGGCCAGGGCTaGCGCCGCCAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDGRGQG*RRQKVT
Trigger: TGTCACCTTCTGGCGGCGGCAGCCCTGGCCCCGGCC...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCCGGCGCCTCCGGGGCTaGAAGTCCGGGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLRRLRG*KSGQEW
Trigger: CCACTCCTGCCCGGACTTCCAGCCCCGGAGGCGCCG...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCCTGCGGCGAGGGTGGTaGGAGGGACTCCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLLRRGW*EGLPTA
Trigger: CGCCGTGGGGAGTCCCTCCCACCACCCTCGCCGCAG...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGATGCGCACCCCATCCTaGCCACGGCCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRMRTPS*PRPLGQ
Trigger: CTGCCCGAGTGGCCGTGGCCAGGATGGGGTGCGCAT...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTGCCCTCTCTCAGAGCACCATCCAGAGCCCATTTCCCTaGGGCAAAGGCTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TEGLGQWGIHSALSQSTIQSPFP*GKGCSE
Trigger: CTCAGAGCAGCCTTTGCCCCAGGGAAATGGGCTCTG...GATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGAGATGTAGCAGAACATaGGGCGCCGCACGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: EGCLADDQACGGKVWQEVRCSRT*GAARGR
Trigger: CCTACCACGTGCGGCGCCTCATGTTCTGCTACATCT...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGGGGCTCCGGACTCCATaGCCGACGCACTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRGLRTP*PTHSWH
Trigger: GTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCC...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCTCCTCCAGTCCGGCCTaGGCCCGCTGGAAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: GTRQLNSQIQATADTVAFSSSPA*ARWKGS
Trigger: CGACCCCTTCCAGCGGGCGCAGGCCGGACTGGAGGA...GAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp AGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCCAAGCGCTCGCCCCCGACCGTaGACACTTGGCCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RGILWGSRNPSTQQPDPSARPRP*TLGPAR
Trigger: CCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGC...GCTTGGATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACAGGACGCGCACGCCGTaGCGCAGGGCCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHRTRTP*RRAWTL
Trigger: CAGGGTCCAGGCCCTGCGGCACGGCGTGCGCGTCCT...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTTCTCGCGGGTGGCATTaGTGGAGAGGGTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPSRGWH*WRGCGC
Trigger: GCAACCACACCCTCTCCAGCAATGCCACCCGCGAGA...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGCGGTGGCAGTGTGGATaGTGGGGGTGCACACCAGGC +
Preference number: 4 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVRWQCG*WGCTPG
Trigger: GCCTGGTGTGCACCCCCACCATCCACACTGCCACCG...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCGAGGGTCTAGGGCAGTGGGGCATCCACTCTGCCCTCTCTCAGAGCACCATCCTTAAGCCAGGGGCCTaGCTAGTCATGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TEGLGQWGIHSALSQSTILKPGA*LVMCSV
Trigger: CACAGAGCACATGACTAGCCAGGCCCCTGGCTTAAG...GATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TACGAGATCAGGTGTCGTGGGTGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTCGTGGGTGTGTCTGTaGTGCGTGGACACGTGTCCC +
Preference number: 4 (lower is better)
Translates to: YEIRCRGCVCGAWTRVPTSWVCL*CVDTCP
Trigger: GGGACACGTGTCCACGCACCACAGACACACCCACGA...GGTAGGGACACGTGTCCACGCACCACAGACACACCCACGACACCTGATCTCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACTCAGGCGGGGACCGATaGACGGGAGCCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHSGGDR*TGAQGR
Trigger: CCTCCCCTGGGCTCCCGTTCATCGGTCCCCGCCTGA...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCGGCAGGGTCTGCACGTaGGGCCCAAAGCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLGRVCT*GPKPRS
Trigger: GCTCCGTGGCTTTGGGCCTCACGTGCAGACCCTGCC...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGGGCCGTGGCGTAGGTaGAGGCGTCGCGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GTRQLNSQIQATADTVAFGPWRR*RRRAGS
Trigger: ACTTCCTGCGCGACGCCTGCACCTACGCCACGGCCC...GAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATTGTGGATGGTGGGGGTaGACACCAGGCCGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDCGWWG*TPGRRR
Trigger: ACGCCGGCGGCCTGGTGTGCACCCCCACCATCCACA...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCTGGCCTCTTCCTCCTaGGCCGCCACACCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDLASSS*AATPGR
Trigger: TCTGCCCGGTGTGGCGGCGCAGGAGGAAGAGGCCAG...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCCTCCCGGGTGGGGGCTaGTCTGTCTGTCGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PHRGPSATFIERYTGFVFLPGGG*SVCRGQ
Trigger: TTGCCCCCGACAGACAGAGCAGCCCCCACCCGGGAG...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCACCACCTGCAGATGGTCCGACCGTGCACACTTaGCCCTGCTCGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPPLLRDTRGLFSPPADGPTVHT*PCSAAW
Trigger: CCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGG...ACCATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTGCATGGCCAGGCTCCTCCTaGACACGTTCCGGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: FCGVQGTRQLNSQIQATAWPGSS*TRSGAH
Trigger: GTGCGCCCCGGAACGTGTCCAGGAGGAGCCTGGCCA...TGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGTCCCATGTGGTGTCCTaGCAGAGCCCCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRSHVVS*QSPWAL
Trigger: CAAGGCCCAGGGGCTCTGCCAGGACACCACATGGGA...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTGACTTTTGCTTCCTGTaGCTCCCAGCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPDFCFL*LPAPGW
Trigger: CCAGCCAGGAGCTGGGAGCCACAGGAAGCAAAAGTC...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCCCTGATCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTTGTGGGGGCAAAGTTTaGCAGGAAGTGCAGCGAATA +
Preference number: 4 (lower is better)
Translates to: PLIRRPFCRAREATAEDLCGGKV*QEVQRI
Trigger: TATTCGCTGCACTTCCTGCCAAACTTTGCCCCCACA...AAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TACGAGATCAGGTGTCGTGGGTGTGTCTGTGGTGCGTGGACACGTGTCCCTACCGAGCAGACTATGTCATaGGGGCTCTGTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YEIRCRGCVCGAWTRVPTEQTMS*GLCGGG
Trigger: TCCTCCCCCACAGAGCCCCCATGACATAGTCTGCTC...GGTAGGGACACGTGTCCACGCACCACAGACACACCCACGACACCTGATCTCGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GGGCATGGGTCTGCATGGCAGGGTCTGCACGTGAGGCCCAAAGCCACGGAGCCTCATCTGTTCCTTAGATaGGGAAACCGAGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GHGSAWQGLHVRPKATEPHLFLR*GNRGSE
Trigger: TTCTGAGCCTCGGTTTCCCCATCTAAGGAACAGATG...AGGCTCCGTGGCTTTGGGCCTCACGTGCAGACCCTGCCATGCAGACCCATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TACGAGATCAGGTGTCGTGGGTGTGTCTGTGGTGCGTGGACACGTGTCCCTACCCGAGATCAGGTGTCGTaGGTGTGTCTGTGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: YEIRCRGCVCGAWTRVPTRDQVS*VCLWCV
Trigger: CACGCACCACAGACACACCCACGACACCTGATCTCG...GGTAGGGACACGTGTCCACGCACCACAGACACACCCACGACACCTGATCTCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CCCCTGATCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTTTCGGCCACCTTTATTaGGAGATACACGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PLIRRPFCRAREATAEDLFGHLY*EIHGVC
Trigger: ACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAA...AAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGATGCTGAATGTGCTGTaGTCGCCCCCGACCGTGCAC +
Preference number: 4 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRMLNVL*SPPTVH
Trigger: GTGCACGGTCGGGGGCGAGCACAGCACATTCAGCAT...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCACCACCTGCAGATGGTGCTTGTGGTCCCCTCTaGGGGCTGCAGCTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RPPLLRDTRGLFSPPADGACGPL*GLQLPA
Trigger: CGCAGGCAGCTGCAGCCCCCAGAGGGGACCACAAGC...ACCATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCCCGGCCAGCGGTGCCTaGACACACCGCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLPASGA*THRSFS
Trigger: TGAGAAGGAGCGGTGTGTCCAGGCACCGCTGGCCGG...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCCAGGTGTCCGGGTCCTaGGTCGACATGGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PHRGPSATFIERYTGFVFQVSGS*VDMAGA
Trigger: TGCACCGGCCATGTCGACCCAGGACCCGGACACCTG...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACGGGGTTGGTGGCCCTTaGGCACTGGGAGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHGVGGP*ALGGLP
Trigger: AGGCAGCCCTCCCAGTGCCCAAGGGCCACCAACCCC...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp GGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCCCGCCTGGCGTACCATaGCGGTCAGCTTGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GTRQLNSQIQATADTVAFPPGVP*RSACWR
Trigger: TCGCCAACAAGCTGACCGTCATGGTACGCCAGGCGG...GAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGACAGTCTCATCCAGCTaGGAGGGCGGAACGACCACA +
Preference number: 4 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVTVSSS*EGGTTT
Trigger: TGTGGTCGTTCCGCCCTCTCAGCTGGATGAGACTGT...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATTGGGCGTTTGAGCTGTaGGGGCTGTGCCGTCACCAG +
Preference number: 4 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDWAFEL*GLCRHQ
Trigger: CTGGTGACGGCACAGCCCTCACAGCTCAAACGCCCA...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATGTGCTCTGCAGGCTCTaGAGCGACTTCTTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDVLCRL*SDFFRA
Trigger: GGCGCGGAAGAAGTCGCTGCAGAGCCTGCAGAGCAC...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CACATCATGACCTGGCCGCAAGCTAGTGATACGAGATCAGGTGTCGTGGGTGTGGTGGGGCATCCACTCTaGCCTCTCTCAGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: HIMTWPQASDTRSGVVGVVGHPL*PLSEHH
Trigger: ATGGTGCTCTGAGAGAGGGCAGAGTGGATGCCCCAC...CACACCCACGACACCTGATCTCGTATCACTAGCTTGCGGCCAGGTCATGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGTGGAGAGGGATTTTGTaGGGTTCAAGGAACCCGTCA +
Preference number: 4 (lower is better)
Translates to: EGCLADDQACGGKVWQEVWRGIL*GSRNPS
Trigger: TGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCA...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCTTTCCCTGGGGTTGGTaGCCCTTGGGCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PHRGPSATFIERYTGFVFFPWGW*PLGTGR
Trigger: CCTCCCAGTGCCCAAGGGCCACCAACCCCAGGGAAA...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCGAGGGTCTAGGGCAGTaGGGCATCCACTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PHRGPSATFIERYTGFVFEGLGQ*GIHSAL
Trigger: GAGGGCAGAGTGGATGCCCCACTGCCCTAGACCCTC...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCACCACCTGCAGATGGTGCTCGATGGCCATGCTaGATGTGCTGTGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RPPLLRDTRGLFSPPADGARWPC*MCCARP
Trigger: GGGGCGAGCACAGCACATTCAGCATGGCCATCGAGC...ACCATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp GCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTAACCATCCATTAGTCTaGGAACAAAGAAAACTGCCT +
Preference number: 4 (lower is better)
Translates to: AEPERPQLKILRLRPEPPNHPLV*EQRKLP
Trigger: AGGCAGTTTTCTTTGTTCTCAGACTAATGGATGGTT...AGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATGGTGGTAATGCACCGTaGTCTGCAGGCTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDGGNAP*SAGSAA
Trigger: CGCTGCAGAGCCTGCAGAGCACGGTGCATTACCACC...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp AGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCCAAGCAGCAGGGGTAGGGGCTaGACTGACCTCTGGACATCC +
Preference number: 4 (lower is better)
Translates to: RGILWGSRNPSTQQPDPSSRGRG*TDLWTS
Trigger: GGATGTCCAGAGGTCAGTGCAGCCCCTACCCCTGCT...GCTTGGATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCAGACCACAAAGGCGATaGCCACTGCACGTAGGACGC +
Preference number: 4 (lower is better)
Translates to: PHRGPSATFIERYTGFVFRPQRR*PLHVGR
Trigger: GCGTCCTACGTGCAGTGGTCATCGCCTTTGTGGTCT...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCACCACCTGCAGATGGTTGGAGAGGGTGTGGTTaGTGGACACGCTGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RPPLLRDTRGLFSPPADGWRGCG*WTRCRP
Trigger: AGGCCGACAGCGTGTCCAGCAACCACACCCTCTCCA...ACCATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCCCCTGGGGCAAAGGCTaGTCTGAGACAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLPWGKG*SETGKS
Trigger: GGATTTCCCTGTCTCAGAGCAGCCTTTGCCCCAGGG...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp AGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCTCATTTCTCAGACCTTCCTCGAGAAGGCTaGCCTCTTCCTCCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: SQIQATADTVAFDSHFSDLPREG*PLPPAP
Trigger: CGGCGCAGGAGGAAGAGGCCAGCCTTCTCGAGGAAG...GTCTGAGAAATGAGAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATTTGCTGGAGAGGGTGTaGTTGCTGGACACGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDLLERV*LLDTLS
Trigger: CGACAGCGTGTCCAGCAACCACACCCTCTCCAGCAA...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACGTTCAGAGCCCAGCCTaGGGGGCCTTAGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHVQSPA*GALAFA
Trigger: AGCAAATGCTAAGGCCCCTCAGGCTGGGCTCTGAAC...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCCTCCAGACCTCAGCCTaGACAGCCACAAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PHRGPSATFIERYTGFVFLQTSA*TATSKA
Trigger: TGCTTTGCTTGTGGCTGTGCAGGCTGAGGTCTGGAG...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CACCATCCTGAGAGACACCATTCTGTCTGTTCCGGGGTGGATCCTCCAGGACAGCCTACCTACGGTAAGTaGACAGATAGGAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: HHPERHHSVCSGVDPPGQPTYGK*TDRSIK
Trigger: CTTGATGCTCCTATCTGTGCACTTACCGTAGGTAGG...CTGTCCTGGAGGATCCACCCCGGAACAGACAGAATGGTGTCTCTCAGGATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TGTGTCTGTGGTGCGTGGACACGTGTCCCTACCTACGGTAAGTGCACAGATAGGAGATGTGGCGGAAGTTaGCAGAGACGAGGTTGTACA +
Preference number: 4 (lower is better)
Translates to: CVCGAWTRVPTYGKCTDRRCGGS*QRRGCT
Trigger: TGTACAACCTCGTCTCTGCCAACTTCCGCCACATCT...CCTATCTGTGCACTTACCGTAGGTAGGGACACGTGTCCACGCACCACAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGGCCCTTTTCCTATCTaGGAGAGGAGCGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FCGVQGTRQLNSQIQATAGPFPI*ERSALL
Trigger: CAAGAGAGCGCTCCTCTCCCAGATAGGAAAAGGGCC...TGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCGGCCACATCATGACCTaGCCGCAAGCTAGTGATACG +
Preference number: 4 (lower is better)
Translates to: PHRGPSATFIERYTGFVFGHIMT*PQASDT
Trigger: CGTATCACTAGCTTGCGGCCAGGTCATGATGTGGCC...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACAAGGCCCAGGGGTGGTaGACCCAGATGAAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHKAQGW*TQMKLY
Trigger: GTACAACTTCATCTGGGTGCACCACCCCTGGGCCTT...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp GAGGGCTGCCTGGCTGATGACCAGGCTTGTGGGGGCAAAGTTTGGCAGGAAGTGAAGAAAACTGCCTTTTaGCGCACACTAATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGCLADDQACGGKVWQEVKKTAF*RTLISP
Trigger: AGGAGAAATTAGTGTGCGGCAAAAGGCAGTTTTCTT...CACTTCCTGCCAAACTTTGCCCCCACAAGCCTGGTCATCAGCCAGGCAGCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp GGTTGGAGAGGGATTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATAGCCGAAGGGTCCTGTaGTTGGAGAGGGATTTTGTG +
Preference number: 4 (lower is better)
Translates to: GWRGILWGSRNPSTQQPDSRRVL*LERDFV
Trigger: CACAAAATCCCTCTCCAACCACAGGACCCTTCGGCT...ATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR TCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACCTCAGACGGGGAAACTaGGTCCAGAGAAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHLRRGN*VQRRQS
Trigger: ACTTTGCCTTCTCTGGACTCAGTTTCCCCGTCTGAG...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp CCGTCAACTCAACAGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCGAAAAGGCTGACTTTTaGTTCCTGTGGCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSTQQPDPSDCRYCSIRLEKADF*FLWLPA
Trigger: AGCTGGGAGCCACAGGAAGCAAAAGTCAGCCTTTTC...GAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp TTTTGTGGGGTTCAAGGAACCCGTCAACTCAACAGCCAGATCCAAGCGACTGCAAGCGCTCTCTTGTTCTaGCTTTCAAAGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FCGVQGTRQLNSQIQATASALLF*LSKRRW
Trigger: CCATCTCCTCTTTGAAAGCCAGAACAAGAGAGCGCT...TGCAGTCGCTTGGATCTGGCTGTTGAGTTGACGGGTTCCTTGAACCCCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CCA 90 bp AGCCAGATCCAAGCGACTGCAGATACTGTAGCATTCGACTCTCATTTCTCAGACGAAGGGTCCTGTGGTTaGAGAGGGATTTTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SQIQATADTVAFDSHFSDEGSCG*RGILWG
Trigger: ACCCCACAAAATCCCTCTCCAACCACAGGACCCTTC...GTCTGAGAAATGAGAGTCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR GCA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACCCAGATCCAAGCGACTaGAGATACTGTAGCATTCGA +
Preference number: 4 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHPDPSD*RYCSIR
Trigger: TCGAATGCTACAGTATCTGCAGTCGCTTGGATCTGG...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS TCA 90 bp AGGGGTCGGCGGCCGGCGTGCCCGGGGTTCCCGGCGCGGAGCTGTTaGGGCGCATGGTGGGCGCTGGAGTCCGCGGCTCTGTCCGGCGCC +
Preference number: 5 (lower is better)
Translates to: RGRRPACPGFPARSC*GAWWALESAALSGA
Trigger: GGCGCCGGACAGAGCCGCGGACTCCAGCGCCCACCATGCGCCTCAACAGCTCCGCGCCGGGAACCCCGGGCACGCCGGCCGCCGACCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp GCCCGGGGTTCCCGGCGCGGAGCTGTTGAGGCGCATGGTGGGCGCTaGAGTCCGCGGCTCTGTCCGGCGCCTCCGGGGCTGGAAGTCCGG +
Preference number: 5 (lower is better)
Translates to: ARGSRRGAVEAHGGR*SPRLCPAPPGLEVR
Trigger: CCGGACTTCCAGCCCCGGAGGCGCCGGACAGAGCCGCGGACTCCAGCGCCCACCATGCGCCTCAACAGCTCCGCGCCGGGAACCCCGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp CGTCTCAGGCGGGGACCGATGAACGGGAGCCCAGGGGAGGGCGCGTaGCGAAGACCAGCGGGCGCGCCGTCCAGTCGGGAAGCGCCAGAC +
Preference number: 5 (lower is better)
Translates to: RLRRGPMNGSPGEGA*RRPAGAPSSREAPD
Trigger: GTCTGGCGCTTCCCGACTGGACGGCGCGCCCGCTGGTCTTCGCCACGCGCCCTCCCCTGGGCTCCCGTTCATCGGTCCCCGCCTGAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp ATGGTGGGCGCTGGAGTCCGCGGCTCTGTCCGGCGCCTCCGGGGCTaGAAGTCCGGGCAGGAGTGGGCGCGTCTCAGGCGGGGACCGATG +
Preference number: 5 (lower is better)
Translates to: MVGAGVRGSVRRLRG*KSGQEWARLRRGPM
Trigger: CATCGGTCCCCGCCTGAGACGCGCCCACTCCTGCCCGGACTTCCAGCCCCGGAGGCGCCGGACAGAGCCGCGGACTCCAGCGCCCACCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CTCGGGCAGGTGCTGGAGACCAGGCCCCTGATCCGGCGTCCCTTCTGCCGAGCCCCCGGCGCGGAGCTGTaGAGGCGCATGGTGGGCGCT +
Preference number: 5 (lower is better)
Translates to: LGQVLETRPLIRRPFCRAPGAEL*RRMVGA
Trigger: AGCGCCCACCATGCGCCTCAACAGCTCCGCGCCGGG...GGCTCGGCAGAAGGGACGCCGGATCAGGGGCCTGGTCTCCAGCACCTGCCCGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCGCGTTGCCCGAAGCGTaGCCGAAGCCCGGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PGAGSGAPDSMTDALMARALPEA*PKPGAS
Trigger: GCTGGCCCCGGGCTTCGGCAACGCTTCGGGCAACGC...GCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCCCCGACCGTGCACACTaGGCCCTGCTCGGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: PGAGSGAPDSMTDALMARPDRAH*ALLGRL
Trigger: CAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGG...GCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp GTGCACACCAGGCCGCCGGCGTGCTGGCCGTCGGCGCTGCGGTTCTaGTCGCCCATGGTGAACAGCATAGGCACCGCCAGCAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: VHTRPPACWPSALRF*SPMVNSIGTASRAE
Trigger: CTCGGCCCTGCTGGCGGTGCCTATGCTGTTCACCATGGGCGAGCAGAACCGCAGCGCCGACGGCCAGCACGCCGGCGGCCTGGTGTGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp TTCCTCGGGCTGTCTCCCGGCTCGGCGCTTGCCACGGGTTCCAGGTaGCTCCGATCTCCAAACCGCGCGGTTCCCCAGGCCCCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: FLGLSPGSALATGSR*LRSPNRAVPQAPED
Trigger: GTCCTCGGGGGCCTGGGGAACCGCGCGGTTTGGAGATCGGAGGCACCTGGAACCCGTGGCAAGCGCCGAGCCGGGAGACAGCCCGAGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp ACGGTGGCAGTGTGGATGGTGGGGGTGCACACCAGGCCGCCGGCGTaGTGGCCGTCGGCGCTGCGGTTCTGCTCGCCCATGGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: TVAVWMVGVHTRPPA*WPSALRFCSPMVNS
Trigger: GCTGTTCACCATGGGCGAGCAGAACCGCAGCGCCGACGGCCAGCACGCCGGCGGCCTGGTGTGCACCCCCACCATCCACACTGCCACCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp AGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGACTCCCGGCTCGGCGCTaGCCACGGGTTCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: RGCRPQRCGHGNSSRAAGLPARR*PRVPGA
Trigger: GGCACCTGGAACCCGTGGCAAGCGCCGAGCCGGGAG...TCCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS TCA 90 bp CGCCGTGCCGCAGGGCCTGGACCCTGCCAGGCTCGATGGCCATGCTaGATGTGCTGTGCTCGCCCCCGACCGTGCACACTTGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: RRAAGPGPCQARWPC*MCCARPRPCTLGPA
Trigger: AGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAGCATGGCCATCGAGCCTGGCAGGGTCCAGGCCCTGCGGCACGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp AGGGCCTGGACCCTGCCAGGCTCGATGGCCATGCTGAATGTGCTGTaGTCGCCCCCGACCGTGCACACTTGGCCCTGCTCGGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: RAWTLPGSMAMLNVL*SPPTVHTWPCSAAW
Trigger: CCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAGCATGGCCATCGAGCCTGGCAGGGTCCAGGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CAGCCCAAGACCAGGTGTCCGGGTCCTGGGTCGACATGGCCGGTGCAGGCAGCCAACGCCGTCACCGTGTaGCCCACCGTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: QPKTRCPGPGSTWPVQAANAVTV*PTVPTT
Trigger: CGTGGTGGGCACGGTGGGCAACACGGTGACGGCGTT...GGCTGCCTGCACCGGCCATGTCGACCCAGGACCCGGACACCTGGTCTTGGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp GCTCCAGAACCCGTGGTTCCTCGGGCTGTCTCCCGGCTCGGCGCTTaGCACGGGTTCCAGGTGCCTCCGATCTCCAAACCGCGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: APEPVVPRAVSRLGA*HGFQVPPISKPRGS
Trigger: GGAACCGCGCGGTTTGGAGATCGGAGGCACCTGGAACCCGTGGCAAGCGCCGAGCCGGGAGACAGCCCGAGGAACCACGGGTTCTGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp GTGGCAGTGTGGATGGTGGGGGTGCACACCAGGCCGCCGGCGTGCTaGCCGTCGGCGCTGCGGTTCTGCTCGCCCATGGTGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: VAVWMVGVHTRPPAC*PSALRFCSPMVNSI
Trigger: TATGCTGTTCACCATGGGCGAGCAGAACCGCAGCGCCGACGGCCAGCACGCCGGCGGCCTGGTGTGCACCCCCACCATCCACACTGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp GAGGGTGTGGTTGCTGGACACGCTGTCGGCCTTCCTCGAGAAGGCTaGCCTCTTCCTCCTGCGCCGCCACACCGGGCAGAGGCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: EGVVAGHAVGLPREG*PLPPAPPHRAEAGQ
Trigger: CTGGCCTGCCTCTGCCCGGTGTGGCGGCGCAGGAGGAAGAGGCCAGCCTTCTCGAGGAAGGCCGACAGCGTGTCCAGCAACCACACCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS CCA 90 bp GCGATGACCACTGCACGTAGGACGCGCACGCCGTGCCGCAGGGCCTaGACCCTGCCAGGCTCGATGGCCATGCTGAATGTGCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: AMTTARRTRTPCRRA*TLPGSMAMLNVLCS
Trigger: CGAGCACAGCACATTCAGCATGGCCATCGAGCCTGGCAGGGTCCAGGCCCTGCGGCACGGCGTGCGCGTCCTACGTGCAGTGGTCATCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp GCTGCTCTGTCTGTCGGGGGCAAGGACCCATGGCCAGGCTCCTCCTaGACACGTTCCGGGGCGCACAGCCTAGTACAGCGTCTCGCGGGT +
Preference number: 5 (lower is better)
Translates to: AALSVGGKDPWPGSS*TRSGAHSLVQRLAG
Trigger: ACCCGCGAGACGCTGTACTAGGCTGTGCGCCCCGGAACGTGTCCAGGAGGAGCCTGGCCATGGGTCCTTGCCCCCGACAGACAGAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS-3UTR CAA 90 bp GCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTACGCGCTCCGACGCGTaGCCCGAAGCGTTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: AEPERPQLKILRLRPEPPTRSDA*PEALPK
Trigger: CTTCGGCAACGCTTCGGGCAACGCGTCGGAGCGCGT...AGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CCCCTGATCCGGCGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTCGATGGGCCCCCAGCTaGCCAGGCCTGAAGGGGCGA +
Preference number: 5 (lower is better)
Translates to: PLIRRPFCRAREATAEDLRWAPS*PGLKGR
Trigger: TCGCCCCTTCAGGCCTGGCAAGCTGGGGGCCCATCG...AAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACGCCGGATCAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp CCAGCACCTTGGAGTAGATGTCGGTGTTCACGTCCAGCTCGCTGCTaGGTGCCGCCAGGACGCGCTCCGACGCGTTGCCCGAAGCGTTGC +
Preference number: 5 (lower is better)
Translates to: PAPWSRCRCSRPARC*VPPGRAPTRCPKRC
Trigger: GCAACGCTTCGGGCAACGCGTCGGAGCGCGTCCTGGCGGCACCCAGCAGCGAGCTGGACGTGAACACCGACATCTACTCCAAGGTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCCGAAGGGTCCTGTGGTaGGAGAGGGATTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: PGAGSGAPDSMTDALMARRRVLW*ERDFVG
Trigger: CCCCACAAAATCCCTCTCCAACCACAGGACCCTTCG...GCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp TCACCAGCACCTTGGAGTAGATGTCGGTGTTCACGTCCAGCTCGCTaGTGGGTGCCGCCAGGACGCGCTCCGACGCGTTGCCCGAAGCGT +
Preference number: 5 (lower is better)
Translates to: SPAPWSRCRCSRPAR*WVPPGRAPTRCPKR
Trigger: ACGCTTCGGGCAACGCGTCGGAGCGCGTCCTGGCGGCACCCAGCAGCGAGCTGGACGTGAACACCGACATCTACTCCAAGGTGCTGGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp ACGTTCCGGGGCGCACAGCCTAGTACAGCGTCTCGCGGGTGGCATTaGTGGAGAGGGTGTGGTTGCTGGACACGCTGTCGGCCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: TFRGAQPSTASRGWH*WRGCGCWTRCRPSS
Trigger: CGAGGAAGGCCGACAGCGTGTCCAGCAACCACACCCTCTCCAGCAATGCCACCCGCGAGACGCTGTACTAGGCTGTGCGCCCCGGAACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS CCA 90 bp CTGTGCTCGCCCCCGACCGTGCACACTTGGCCCTGCTCGGCCGCCTaGCGTACCATGACGGTCAGCTTGTTGGCGATGATGGTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LCSPPTVHTWPCSAA*RTMTVSLLAMMVFR
Trigger: CCTGAACACCATCATCGCCAACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp ATGCTGAATGTGCTGTGCTCGCCCCCGACCGTGCACACTTGGCCCTaGTCGGCCGCCTGGCGTACCATGACGGTCAGCTTGTTGGCGATG +
Preference number: 5 (lower is better)
Translates to: MLNVLCSPPTVHTWP*SAAWRTMTVSLLAM
Trigger: CATCGCCAACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp GACATGAAGGTGTTGACCTGTATGACGACCTTGACGGTGGCAGTGTaGATGGTGGGGGTGCACACCAGGCCGCCGGCGTGCTGGCCGTCG +
Preference number: 5 (lower is better)
Translates to: DMKVLTCMTTLTVAV*MVGVHTRPPACWPS
Trigger: CGACGGCCAGCACGCCGGCGGCCTGGTGTGCACCCCCACCATCCACACTGCCACCGTCAAGGTCGTCATACAGGTCAACACCTTCATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp ATGGCCATGCTGAATGTGCTGTGCTCGCCCCCGACCGTGCACACTTaGCCCTGCTCGGCCGCCTGGCGTACCATGACGGTCAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: MAMLNVLCSPPTVHT*PCSAAWRTMTVSLL
Trigger: CAACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAGCATGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 90 bp GCCTCTTCCTCCTGCGCCGCCACACCGGGCAGAGGCAGGCCAGTGTaGCCAGGAAGATGTGGCGGAAGTTGGCAGAGACGAGGTTGTACA +
Preference number: 5 (lower is better)
Translates to: ASSSCAATPGRGRPV*PGRCGGSWQRRGCT
Trigger: TGTACAACCTCGTCTCTGCCAACTTCCGCCACATCTTCCTGGCCACACTGGCCTGCCTCTGCCCGGTGTGGCGGCGCAGGAGGAAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS CCA 90 bp TTCCGGGGCGCACAGCCTAGTACAGCGTCTCGCGGGTGGCATTGCTaGAGAGGGTGTGGTTGCTGGACACGCTGTCGGCCTTCCTCGAGA +
Preference number: 5 (lower is better)
Translates to: FRGAQPSTASRGWHC*RGCGCWTRCRPSSR
Trigger: TCTCGAGGAAGGCCGACAGCGTGTCCAGCAACCACACCCTCTCCAGCAATGCCACCCGCGAGACGCTGTACTAGGCTGTGCGCCCCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS-3UTR CAA 90 bp CGTCCCTTCTGCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCCGGGACATGAGGGTCTaGGCCTTGAAGGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RPFCRAREATAEDLEAEARDMRV*ALKGWQ
Trigger: CTGCCACCCCTTCAAGGCCAAGACCCTCATGTCCCG...GGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGCAGAAGGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCATGACGGTCAGCTTGTaGGCGATGATGGTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PGAGSGAPDSMTDALMARMTVSL*AMMVFR
Trigger: CCTGAACACCATCATCGCCAACAAGCTGACCGTCAT...GCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 90 bp CCTAGTACAGCGTCTCGCGGGTGGCATTGCTGGAGAGGGTGTGGTTaGTGGACACGCTGTCGGCCTTCCTCGAGAAGGCTGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PSTASRGWHCWRGCG*WTRCRPSSRRLASS
Trigger: GGAAGAGGCCAGCCTTCTCGAGGAAGGCCGACAGCGTGTCCAGCAACCACACCCTCTCCAGCAATGCCACCCGCGAGACGCTGTACTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS-3UTR CAA 90 bp CCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCCCATGATGAGGGTCTTGGCCTaGAAGGGGTGGCAGATGGCC +
Preference number: 5 (lower is better)
Translates to: PERPQLKILRLRPEPPPMMRVLA*KGWQMA
Trigger: GGCCATCTGCCACCCCTTCAAGGCCAAGACCCTCAT...CATGGGAGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp GCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTGCGCTGATGAACTTCTaGGTGCGGCTTCGGGACATG +
Preference number: 5 (lower is better)
Translates to: AEPERPQLKILRLRPEPPALMNF*VRLRDM
Trigger: CATGTCCCGAAGCCGCACCAAGAAGTTCATCAGCGC...AGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp GTGGGGGCTGCTCTGTCTGTCGGGGGCAAGGACCCATGGCCAGGCTCCTCCTGGTTGGCAGAGACGAGGTaGTACAGGATGGGGTTGATG +
Preference number: 5 (lower is better)
Translates to: VGAALSVGGKDPWPGSSWLAETR*YRMGLM
Trigger: CATCAACCCCATCCTGTACAACCTCGTCTCTGCCAA...CCAGGAGGAGCCTGGCCATGGGTCCTTGCCCCCGACAGACAGAGCAGCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp AGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGAGGTTGGAGAGGGATTTaGTGGGGTTCAAGGAACCCG +
Preference number: 5 (lower is better)
Translates to: RGCRPQRCGHGNSSRAAGGWRGI*WGSRNP
Trigger: CGGGTTCCTTGAACCCCACAAAATCCCTCTCCAACC...TCCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS TCA 90 bp AAGGCGATGACCACTGCACCTTGGATGTTGGCAAGCCAGCCGTCCTaGGCTGGGGCTGGTCCTCAGGGTTCCGATAGGATGGGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: KAMTTAPWMLASQPS*AGAGPQGSDRMGVA
Trigger: GGCAACGCCCATCCTATCGGAACCCTGAGGACCAGCCCCAGCTCAGGACGGCTGGCTTGCCAACATCCAAGGTGCAGTGGTCATCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482259.1
CDS-3UTR CAA 90 bp TCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCAGGGCCAGCTTCCAGGCCAGCCCATTTTaGTCCTTTTTGGGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SGAPDSMTDALMARRASFQASPF*SFLGLW
Trigger: CCACAAGCCCAAAAAGGACAAAAATGGGCTGGCCTG...GAAGCTGGCCCTGCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CCAGGGGCCGGCTCAGGGGCTCCGGACTCCATGACCGACGCACTCATGGCACGCAGACAGGGAAATCCCTaGAAGAAAAGGCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: PGAGSGAPDSMTDALMARRQGNP*KKRLTF
Trigger: AAAAGTCAGCCTTTTCTTCAAGGGATTTCCCTGTCT...GCGTGCCATGAGTGCGTCGGTCATGGAGTCCGGAGCCCCTGAGCCGGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp GCCGAGCCCGAGAGGCCACAGCTGAAGATCTTGAGGCTGAGGCCTGAGCCCCCTCTTCGGCCACCTTTATaGAGAGATACACGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: AEPERPQLKILRLRPEPPLRPPL*RDTRGL
Trigger: CAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAG...AGGGGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGGCCTCTCGGGCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp GAGGGGGTGCAGGCCTCAGAGATGTGGACATGGGAACAGCAGCCGGGCCGCCGGCACACTAATTTCTCCTaGTTAGAGGCCCTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: EGVQASEMWTWEQQPGRRHTNFS*LEALFL
Trigger: TAGGAAAAGGGCCTCTAACAAGGAGAAATTAGTGTG...CCGGCGGCCCGGCTGCTGTTCCCATGTCCACATCTCTGAGGCCTGCACCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTACCTGTATGACGACCTaGACGGTGGCAGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPTCMTT*TVAVWM
Trigger: CATCCACACTGCCACCGTCAAGGTCGTCATACAGGT...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTACCATGACGGTCAGCTaGTTGGCGATGATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPTMTVS*LAMMVF
Trigger: GAACACCATCATCGCCAACAAGCTGACCGTCATGGT...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp ACCTGGCATCTTACTCAGAGACCAGGCACCATCGCCCCTGTCCCACATTCCCCTAAGATGTGGCGGAAGTaGGCAGAGACGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: TWHLTQRPGTIAPVPHSPKMWRK*AETRLY
Trigger: GTACAACCTCGTCTCTGCCAACTTCCGCCACATCTT...AGGGGAATGTGGGACAGGGGCGATGGTGCCTGGTCTCTGAGTAAGATGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACCCACAGCTGAAGATCTaGAGGCTGAGGCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHPQLKI*RLRPEP
Trigger: GGGCTCAGGCCTCAGCCTCAAGATCTTCAGCTGTGG...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp TACGAGATCAGGTGTCGTGGGTGTGTCTGTGGTGCGTGGACACGTGTCCCTACCAGAGATACACGGGGTTaGTTTTCACCACCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: YEIRCRGCVCGAWTRVPTRDTRG*FSPPAD
Trigger: ATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCT...GGTAGGGACACGTGTCCACGCACCACAGACACACCCACGACACCTGATCTCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCTGCACCCAGATGAAGTaGTACAGCTCCACGGGCATG +
Preference number: 5 (lower is better)
Translates to: PHRGPSATFIERYTGFVFCTQMK*YSSTGM
Trigger: CATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCA...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp ACAGATAGGAGCATCAAGACATCAACGGGAAAAGCCGACTTCAGTCACAGCCACTTGTGGGGGCAAAGTTaGGCAGGAAGTGCAGCGAAT +
Preference number: 5 (lower is better)
Translates to: TDRSIKTSTGKADFSHSHLWGQS*AGSAAN
Trigger: ATTCGCTGCACTTCCTGCCAAACTTTGCCCCCACAA...GTGGCTGTGACTGAAGTCGGCTTTTCCCGTTGATGTCTTGATGCTCCTATCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCACCACCTGCAGATGGTAAGGACATGAAGGTGTaGACCTGTATGACGACCTTG +
Preference number: 5 (lower is better)
Translates to: RPPLLRDTRGLFSPPADGKDMKV*TCMTTL
Trigger: CAAGGTCGTCATACAGGTCAACACCTTCATGTCCTT...ACCATCTGCAGGTGGTGAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS-3UTR CAA 90 bp CCACATCGAGGCCCTTCGGCCACCTTTATTGAGAGATACACGGGGTTTGTTTTCAAAGAAAACTGCCTTTaGCCGCACACTAATTTCTCC +
Preference number: 5 (lower is better)
Translates to: PHRGPSATFIERYTGFVFKENCL*PHTNFS
Trigger: GGAGAAATTAGTGTGCGGCAAAAGGCAGTTTTCTTT...GAAAACAAACCCCGTGTATCTCTCAATAAAGGTGGCCGAAGGGCCTCGATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 90 bp AAGGGGTCGGCGGCCGGCGTGCCCGGGGTTCCCGGCGCGGAGCTGTaGAGGCGCATGGTGGGCGCTGGAGTCCGCGGCTCTGTCCGGCGC +
Preference number: 6 (lower is better)
Translates to: KGSAAGVPGVPGAEL*RRMVGAGVRGSVRR
Trigger: GCGCCGGACAGAGCCGCGGACTCCAGCGCCCACCATGCGCCTCAACAGCTCCGCGCCGGGAACCCCGGGCACGCCGGCCGCCGACCCCTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS TCA 72 bp CGGCCGGCGTGCCCGGGGTTCCCGGCGCGGAGCTGTTaGGGCGCATGGTGGGCGCTGGAGTCCGCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: RPACPGFPARSC*GAWWALESAAL
Trigger: CAGAGCCGCGGACTCCAGCGCCCACCATGCGCCTCAACAGCTCCGCGCCGGGAACCCCGGGCACGCCGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 72 bp GCGGCCGGCGTGCCCGGGGTTCCCGGCGCGGAGCTGTaGAGGCGCATGGTGGGCGCTGGAGTCCGCGGCTCT +
Preference number: 6 (lower is better)
Translates to: AAGVPGVPGAEL*RRMVGAGVRGS
Trigger: AGAGCCGCGGACTCCAGCGCCCACCATGCGCCTCAACAGCTCCGCGCCGGGAACCCCGGGCACGCCGGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp CGCTGCTGGGTGCCGCCAGGACGCGCTCCGACGCGTTaGCCGAAGCGTTGCCGAAGCCCGGGGCCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: RCWVPPGRAPTR*PKRCRSPGPAA
Trigger: CGCTGCTGGCCCCGGGCTTCGGCAACGCTTCGGGCAACGCGTCGGAGCGCGTCCTGGCGGCACCCAGCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp GCTGGAGTCCGCGGCTCTGTCCGGCGCCTCCGGGGCTaGAAGTCCGGGCAGGAGTGGGCGCGTCTCAGGCGG +
Preference number: 6 (lower is better)
Translates to: AGVRGSVRRLRG*KSGQEWARLRR
Trigger: CCGCCTGAGACGCGCCCACTCCTGCCCGGACTTCCAGCCCCGGAGGCGCCGGACAGAGCCGCGGACTCCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp TCCCGGCGCGGAGCTGTTGAGGCGCATGGTGGGCGCTaGAGTCCGCGGCTCTGTCCGGCGCCTCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SRRGAVEAHGGR*SPRLCPAPPGL
Trigger: CAGCCCCGGAGGCGCCGGACAGAGCCGCGGACTCCAGCGCCCACCATGCGCCTCAACAGCTCCGCGCCGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp GTCCGGCGCCTCCGGGGCTGGAAGTCCGGGCAGGAGTaGGCGCGTCTCAGGCGGGGACCGATGAACGGGAGC +
Preference number: 6 (lower is better)
Translates to: VRRLRGWKSGQE*ARLRRGPMNGS
Trigger: GCTCCCGTTCATCGGTCCCCGCCTGAGACGCGCCCACTCCTGCCCGGACTTCCAGCCCCGGAGGCGCCGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 72 bp TCGCTGCTGGGTGCCGCCAGGACGCGCTCCGACGCGTaGCCCGAAGCGTTGCCGAAGCCCGGGGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SLLGAARTRSDA*PEALPKPGASS
Trigger: GCTGCTGGCCCCGGGCTTCGGCAACGCTTCGGGCAACGCGTCGGAGCGCGTCCTGGCGGCACCCAGCAGCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp GTGTGGATGGTGGGGGTGCACACCAGGCCGCCGGCGTaGTGGCCGTCGGCGCTGCGGTTCTGCTCGCCCATG +
Preference number: 6 (lower is better)
Translates to: VWMVGVHTRPPA*WPSALRFCSPM
Trigger: CATGGGCGAGCAGAACCGCAGCGCCGACGGCCAGCACGCCGGCGGCCTGGTGTGCACCCCCACCATCCACAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp TGGATGGTGGGGGTGCACACCAGGCCGCCGGCGTGCTaGCCGTCGGCGCTGCGGTTCTGCTCGCCCATGGTG +
Preference number: 6 (lower is better)
Translates to: WMVGVHTRPPAC*PSALRFCSPMV
Trigger: CACCATGGGCGAGCAGAACCGCAGCGCCGACGGCCAGCACGCCGGCGGCCTGGTGTGCACCCCCACCATCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp AGGCCGCCGGCGTGCTGGCCGTCGGCGCTGCGGTTCTaGTCGCCCATGGTGAACAGCATAGGCACCGCCAGC +
Preference number: 6 (lower is better)
Translates to: RPPACWPSALRF*SPMVNSIGTAS
Trigger: GCTGGCGGTGCCTATGCTGTTCACCATGGGCGAGCAGAACCGCAGCGCCGACGGCCAGCACGCCGGCGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp CTGTCTCCCGGCTCGGCGCTTGCCACGGGTTCCAGGTaGCTCCGATCTCCAAACCGCGCGGTTCCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LSPGSALATGSR*LRSPNRAVPQA
Trigger: GGCCTGGGGAACCGCGCGGTTTGGAGATCGGAGGCACCTGGAACCCGTGGCAAGCGCCGAGCCGGGAGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp AAGGCGATGACCACTGCACGTAGGACGCGCACGCCGTaGCGCAGGGCCTGGACCCTGCCAGGCTCGATGGCC +
Preference number: 6 (lower is better)
Translates to: KAMTTARRTRTP*RRAWTLPGSMA
Trigger: GGCCATCGAGCCTGGCAGGGTCCAGGCCCTGCGGCACGGCGTGCGCGTCCTACGTGCAGTGGTCATCGCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp GTGCTGTGCTCGCCCCCGACCGTGCACACTTGGCCCTaGTCGGCCGCCTGGCGTACCATGACGGTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: VLCSPPTVHTWP*SAAWRTMTVSL
Trigger: CAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 90 bp AGCTCCAGAACCCGTGGTTCCTCGGGCTGTCTCCCGGCTCGGCGCTaGCCACGGGTTCCAGGTGCCTCCGATCTCCAAACCGCGCGGTTC +
Preference number: 6 (lower is better)
Translates to: SSRTRGSSGCLPARR*PRVPGASDLQTARF
Trigger: GAACCGCGCGGTTTGGAGATCGGAGGCACCTGGAACCCGTGGCAAGCGCCGAGCCGGGAGACAGCCCGAGGAACCACGGGTTCTGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 90 bp CTCTGCAGCGACTTCTTCCGCGCCAGCGTGAACGCCGTCACCGTGTaGCCCACCGTGCCCACCACGAAGAGCGCCAGGTACACGGCGGTC +
Preference number: 6 (lower is better)
Translates to: LCSDFFRASVNAVTV*PTVPTTKSARYTAV
Trigger: GACCGCCGTGTACCTGGCGCTCTTCGTGGTGGGCACGGTGGGCAACACGGTGACGGCGTTCACGCTGGCGCGGAAGAAGTCGCTGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 90 bp CAGCCGGCGTCGCCGAAGGCCCAGGGGTGGTGCACCCAGATGAAGTaGTACAGCTCCACGGGCATGGCCAGCAGCAGGGTGAGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: QPASPKAQGWCTQMK*YSSTGMASSRVSRS
Trigger: CGACCTGCTCACCCTGCTGCTGGCCATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCACCACCCCTGGGCCTTCGGCGACGCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp TGGAGTAGATGTCGGTGTTCACGTCCAGCTCGCTGCTaGGTGCCGCCAGGACGCGCTCCGACGCGTTGCCCG +
Preference number: 6 (lower is better)
Translates to: WSRCRCSRPARC*VPPGRAPTRCP
Trigger: CGGGCAACGCGTCGGAGCGCGTCCTGGCGGCACCCAGCAGCGAGCTGGACGTGAACACCGACATCTACTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp CTGAATGTGCTGTGCTCGCCCCCGACCGTGCACACTTaGCCCTGCTCGGCCGCCTGGCGTACCATGACGGTC +
Preference number: 6 (lower is better)
Translates to: LNVLCSPPTVHT*PCSAAWRTMTV
Trigger: GACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp ACTGCACGTAGGACGCGCACGCCGTGCCGCAGGGCCTaGACCCTGCCAGGCTCGATGGCCATGCTGAATGTG +
Preference number: 6 (lower is better)
Translates to: TARRTRTPCRRA*TLPGSMAMLNV
Trigger: CACATTCAGCATGGCCATCGAGCCTGGCAGGGTCCAGGCCCTGCGGCACGGCGTGCGCGTCCTACGTGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 72 bp ACCCGTGGTTCCTCGGGCTGTCTCCCGGCTCGGCGCTaGCCACGGGTTCCAGGTGCCTCCGATCTCCAAACC +
Preference number: 6 (lower is better)
Translates to: TRGSSGCLPARR*PRVPGASDLQT
Trigger: GGTTTGGAGATCGGAGGCACCTGGAACCCGTGGCAAGCGCCGAGCCGGGAGACAGCCCGAGGAACCACGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 72 bp GCTGAATGTGCTGTGCTCGCCCCCGACCGTGCACACTaGGCCCTGCTCGGCCGCCTGGCGTACCATGACGGT +
Preference number: 6 (lower is better)
Translates to: AECAVLAPDRAH*ALLGRLAYHDG
Trigger: ACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS TCA 72 bp TCTGCAGGCTCTGCAGCGACTTCTTCCGCGCCAGCGTaGACGCCGTCACCGTGTTGCCCACCGTGCCCACCA +
Preference number: 6 (lower is better)
Translates to: SAGSAATSSAPA*TPSPCCPPCPP
Trigger: TGGTGGGCACGGTGGGCAACACGGTGACGGCGTTCACGCTGGCGCGGAAGAAGTCGCTGCAGAGCCTGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS TCA 72 bp CGGCGTCGCCGAAGGCCCAGGGGTGGTGCACCCAGATaGAGTTGTACAGCTCCACGGGCATGGCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RRRRRPRGGAPR*SCTAPRAWPAA
Trigger: TGCTGCTGGCCATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCACCACCCCTGGGCCTTCGGCGACGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS TCA 72 bp GCAGGGCCTGGACCCTGCCAGGCTCGATGGCCATGCTaGATGTGCTGTGCTCGCCCCCGACCGTGCACACTT +
Preference number: 6 (lower is better)
Translates to: AGPGPCQARWPC*MCCARPRPCTL
Trigger: AAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAGCATGGCCATCGAGCCTGGCAGGGTCCAGGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp CCTTGGAGTAGATGTCGGTGTTCACGTCCAGCTCGCTaGTGGGTGCCGCCAGGACGCGCTCCGACGCGTTGC +
Preference number: 6 (lower is better)
Translates to: PWSRCRCSRPAR*WVPPGRAPTRC
Trigger: GCAACGCGTCGGAGCGCGTCCTGGCGGCACCCAGCAGCGAGCTGGACGTGAACACCGACATCTACTCCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp CGGACAGCGCCAGGCTGCCCAGGTGGTAATGCACCGTaGTCTGCAGGCTCTGCAGCGACTTCTTCCGCGCCA +
Preference number: 6 (lower is better)
Translates to: RTAPGCPGGNAP*SAGSAATSSAP
Trigger: TGGCGCGGAAGAAGTCGCTGCAGAGCCTGCAGAGCACGGTGCATTACCACCTGGGCAGCCTGGCGCTGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS GCA 72 bp ACCCTGCCAGGCTCGATGGCCATGCTGAATGTGCTGTaGTCGCCCCCGACCGTGCACACTTGGCCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: TLPGSMAMLNVL*SPPTVHTWPCS
Trigger: CGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAGCATGGCCATCGAGCCTGGCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp CCCCCGACCGTGCACACTTGGCCCTGCTCGGCCGCCTaGCGTACCATGACGGTCAGCTTGTTGGCGATGATG +
Preference number: 6 (lower is better)
Translates to: PPTVHTWPCSAA*RTMTVSLLAMM
Trigger: CATCATCGCCAACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp TCTGTCGGGGGCAAGGACCCATGGCCAGGCTCCTCCTaGACACGTTCCGGGGCGCACAGCCTAGTACAGCGT +
Preference number: 6 (lower is better)
Translates to: SVGGKDPWPGSS*TRSGAHSLVQR
Trigger: ACGCTGTACTAGGCTGTGCGCCCCGGAACGTGTCCAGGAGGAGCCTGGCCATGGGTCCTTGCCCCCGACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS GCA 72 bp GGCGCACAGCCTAGTACAGCGTCTCGCGGGTGGCATTaGTGGAGAGGGTGTGGTTGCTGGACACGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: GAQPSTASRGWH*WRGCGCWTRCR
Trigger: CCGACAGCGTGTCCAGCAACCACACCCTCTCCAGCAATGCCACCCGCGAGACGCTGTACTAGGCTGTGCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS CCA 72 bp GTGTTGACCTGTATGACGACCTTGACGGTGGCAGTGTaGATGGTGGGGGTGCACACCAGGCCGCCGGCGTGC +
Preference number: 6 (lower is better)
Translates to: VLTCMTTLTVAV*MVGVHTRPPAC
Trigger: GCACGCCGGCGGCCTGGTGTGCACCCCCACCATCCACACTGCCACCGTCAAGGTCGTCATACAGGTCAACAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp TCTCGCGGGTGGCATTGCTGGAGAGGGTGTGGTTGCTaGACACGCTGTCGGCCTTCCTCGAGAAGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: SRGWHCWRGCGC*TRCRPSSRRLA
Trigger: GGCCAGCCTTCTCGAGGAAGGCCGACAGCGTGTCCAGCAACCACACCCTCTCCAGCAATGCCACCCGCGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS CAA 72 bp TCGCCGAAGGCCCAGGGGTGGTGCACCCAGATGAAGTaGTACAGCTCCACGGGCATGGCCAGCAGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: SPKAQGWCTQMK*YSSTGMASSRV
Trigger: CACCCTGCTGCTGGCCATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCACCACCCCTGGGCCTTCGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 90 bp ACCGCCAGCAGGGCCGAGGCGAGCCAGATGGCGCTGATGAACTTCTaGGTGCGGCTTCGGGACATGAGGGTCTTGGCCTTGAAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: TASRAEASQMALMNF*VRLRDMRVLALKGW
Trigger: CCACCCCTTCAAGGCCAAGACCCTCATGTCCCGAAGCCGCACCAAGAAGTTCATCAGCGCCATCTGGCTCGCCTCGGCCCTGCTGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 90 bp GATGGCCATGCTGAATGTGCTGTGCTCGCCCCCGACCGTGCACACTaGGCCCTGCTCGGCCGCCTGGCGTACCATGACGGTCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: DGHAECAVLAPDRAH*ALLGRLAYHDGQLV
Trigger: AACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTGCACGGTCGGGGGCGAGCACAGCACATTCAGCATGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CCA 72 bp GCACAGCCTAGTACAGCGTCTCGCGGGTGGCATTGCTaGAGAGGGTGTGGTTGCTGGACACGCTGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: AQPSTASRGWHC*RGCGCWTRCRP
Trigger: AGGCCGACAGCGTGTCCAGCAACCACACCCTCTCCAGCAATGCCACCCGCGAGACGCTGTACTAGGCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370501.4
ENST00000482259.1
CDS CAA 90 bp CACACTTGGCCCTGCTCGGCCGCCTGGCGTACCATGACGGTCAGCTaGTTGGCGATGATGGTGTTCAGGACCGAGATGACCACCATGGGG +
Preference number: 6 (lower is better)
Translates to: HTWPCSAAWRTMTVS*LAMMVFRTEMTTMG
Trigger: CCCCATGGTGGTCATCTCGGTCCTGAACACCATCATCGCCAACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 72 bp AGGGCCGAGGCGAGCCAGATGGCGCTGATGAACTTCTaGGTGCGGCTTCGGGACATGAGGGTCTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: RAEASQMALMNF*VRLRDMRVLAL
Trigger: CAAGGCCAAGACCCTCATGTCCCGAAGCCGCACCAAGAAGTTCATCAGCGCCATCTGGCTCGCCTCGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 72 bp CCCTGCTCGGCCGCCTGGCGTACCATGACGGTCAGCTaGTTGGCGATGATGGTGTTCAGGACCGAGATGACC +
Preference number: 6 (lower is better)
Translates to: PCSAAWRTMTVS*LAMMVFRTEMT
Trigger: GGTCATCTCGGTCCTGAACACCATCATCGCCAACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS TCA 72 bp ACCACTGCACCTTGGATGTTGGCAAGCCAGCCGTCCTaGGCTGGGGCTGGTCCTCAGGGTTCCGATAGGATG +
Preference number: 6 (lower is better)
Translates to: TTAPWMLASQPS*AGAGPQGSDRM
Trigger: CATCCTATCGGAACCCTGAGGACCAGCCCCAGCTCAGGACGGCTGGCTTGCCAACATCCAAGGTGCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482259.1
CDS CAA 72 bp TGCTCGGCCGCCTGGCGTACCATGACGGTCAGCTTGTaGGCGATGATGGTGTTCAGGACCGAGATGACCACC +
Preference number: 6 (lower is better)
Translates to: CSAAWRTMTVSL*AMMVFRTEMTT
Trigger: GGTGGTCATCTCGGTCCTGAACACCATCATCGCCAACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370501.4
CDS CAA 90 bp ACTTGGCCCTGCTCGGCCGCCTGGCGTACCATGACGGTCAGCTTGTaGGCGATGATGGTGTTCAGGACCGAGATGACCACCATGGGGAAT +
Preference number: 6 (lower is better)
Translates to: TWPCSAAWRTMTVSL*AMMVFRTEMTTMGN
Trigger: ATTCCCCATGGTGGTCATCTCGGTCCTGAACACCATCATCGCCAACAAGCTGACCGTCATGGTACGCCAGGCGGCCGAGCAGGGCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370501.4