Pregenerated sensors for NTS (Homo sapiens)
Ensembl gene IDs: ENSG00000133636Ensembl transcript IDs: ENST00000256010.7, ENST00000550879.1, ENST00000551529.5
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAAAGAGGCGCTATTACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCAAGTCAGAAGCACACTaGAGGGGGCTCTCTCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: KRGAITLFWVNDMQARLCKSEAH*RGLSLA Trigger: TGCTAGAGAGAGCCCCCTTCAGTGTGCTTCTGACTT...GCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGTAATAGCGCCTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR GCA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCATGCAGGCTAGGCTTTaGTGTAGTACTTTGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TLFWVNDMQARLCCSTLSMQARL*CSTLSS Trigger: TGAGCTCAAAGTACTACAGCAAAGCCTAGCCTGCAT...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR TCA 90 bp | AAAAGAGGCGCTATTACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTTACTTTGTTTTGGGTaGATGATATGCAGGCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: KRGAITLFWVNDMQARLCLLCFG*MICRLG Trigger: GCCTAGCCTGCATATCATTCACCCAAAACAAAGTAA...GCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGTAATAGCGCCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR GCA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCCTGGATTTTCATTCCTaGCATCATCTTTCAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TLFWVNDMQARLCCSTLSLDFHS*HHLSAF Trigger: GAAGGCTGAAAGATGATGGCAGGAATGAAAATCCAG...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR GCA 90 bp | AAAAGAGGCGCTATTACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCAAGCCAGGAGTAGCATaGATACAAGCTGGATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: KRGAITLFWVNDMQARLCKPGVA*IQAGFS Trigger: TGAAAATCCAGCTTGTATGCATGCTACTCCTGGCTT...GCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGTAATAGCGCCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR GCA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCAGTGTTGAAAAGCCCTaGTGTGACAGATTTTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TLFWVNDMQARLCCSTLSSVEKP*CDRFCG Trigger: TCCACAAAATCTGTCACAGCAGGGCTTTTCAACACT...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000256010.7 |
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| CDS-3UTR CCA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCAGCATGCATACAAGCTaGATTTTCATTCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLFWVNDMQARLCCSTLSSMHTS*IFIPAI Trigger: GATGGCAGGAATGAAAATCCAGCTTGTATGCATGCT...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR CCA 90 bp | AAAAGAGGCGCTATTACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCAGCATGCATACAAGCTaGATTTTCATTCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KRGAITLFWVNDMQARLCSMHTS*IFIPAI Trigger: GATGGCAGGAATGAAAATCCAGCTTGTATGCATGCT...GCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGTAATAGCGCCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR TCA 90 bp | AAAAGAGGCGCTATTACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCAGTAAGAATCTCTTTTaGGTATGTAGGGTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KRGAITLFWVNDMQARLCSKNLF*VCRVFW Trigger: CCAGAAGACCCTACATACTCAAAAGAGATTCTTACT...GCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGTAATAGCGCCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR TCA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCAGTAAGAATCTCTTTTaGGTATGTAGGGTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TLFWVNDMQARLCCSTLSSKNLF*VCRVFW Trigger: CCAGAAGACCCTACATACTCAAAAGAGATTCTTACT...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR CCA 90 bp | AAAAGAGGCGCTATTACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTCCTGTTTCCTCAGCTaGGCTGTTCAAATTATTTAC | + |
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Preference number: 4 (lower is better) Translates to: KRGAITLFWVNDMQARLCSCFLS*AVQIIY Trigger: GTAAATAATTTGAACAGCCCAGCTGAGGAAACAGGA...GCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGTAATAGCGCCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256010.7 |
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| CDS-3UTR CCA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCGTATGTAGGGTCTTCTaGGTTTATTCTCATACAGCT | + |
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Preference number: 4 (lower is better) Translates to: TLFWVNDMQARLCCSTLSVCRVF*VYSHTA Trigger: AGCTGTATGAGAATAAACCCAGAAGACCCTACATAC...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR GCA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCGTATATTGTCAACATTaGTTCCAAGCTAAAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: TLFWVNDMQARLCCSTLSVYCQH*FQAKAI Trigger: GATGGCTTTAGCTTGGAAGCAATGTTGACAATATAC...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256010.7 |
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| CDS-3UTR CCA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCCAGATTTTGTGGAGCTaGTATATTGTCAACATTGCT | + |
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Preference number: 4 (lower is better) Translates to: TLFWVNDMQARLCCSTLSQILWS*YIVNIA Trigger: AGCAATGTTGACAATATACCAGCTCCACAAAATCTG...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256010.7 |
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| CDS-3UTR CCA 90 bp | AAAAGAGGCGCTATTACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCGCTATTACTTTGTTTTaGGTGAATGATATGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KRGAITLFWVNDMQARLCAITLF*VNDMQA Trigger: AGCCTGCATATCATTCACCCAAAACAAAGTAATAGC...GCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGTAATAGCGCCTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS CCA 90 bp | CACAGACTCCAGGAGCTGAAAGCCAGGAGTAGCATGCATACAAGCTaGATTTTCATTCCTGCCATCATCTTTCAGCCTTCTAACAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: HRLQELKARSSMHTS*IFIPAIIFQPSNKP Trigger: TGGCTTGTTAGAAGGCTGAAAGATGATGGCAGGAATGAAAATCCAGCTTGTATGCATGCTACTCCTGGCTTTCAGCTCCTGGAGTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR CAA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCTGTGGAGCTGGTATATaGTCAACATTGCTTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLFWVNDMQARLCCSTLSCGAGI*STLLPS Trigger: GCTTGGAAGCAATGTTGACAATATACCAGCTCCACA...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256010.7 |
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| CDS-3UTR CAA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCAGAGGCGCTATTACTTaGTTTTGGGTGAATGATATG | + |
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Preference number: 5 (lower is better) Translates to: TLFWVNDMQARLCCSTLSRGAIT*FWVNDM Trigger: CATATCATTCACCCAAAACAAAGTAATAGCGCCTCT...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR CAA 90 bp | AAAAGAGGCGCTATTACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCAGAGGCGCTATTACTTaGTTTTGGGTGAATGATATG | + |
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Preference number: 5 (lower is better) Translates to: KRGAITLFWVNDMQARLCRGAIT*FWVNDM Trigger: CATATCATTCACCCAAAACAAAGTAATAGCGCCTCT...GCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGTAATAGCGCCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000551529.5 |
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| CDS-3UTR CAA 90 bp | ACTTTGTTTTGGGTGAATGATATGCAGGCTAGGCTTTGCTGTAGTACTTTGAGCCTTCCTGGATTAACTTaGATGTATGCATATTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TLFWVNDMQARLCCSTLSLPGLT*MYAYWS Trigger: TGACCAATATGCATACATCAAAGTTAATCCAGGAAG...GCTCAAAGTACTACAGCAAAGCCTAGCCTGCATATCATTCACCCAAAACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551529.5 |
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| CDS GCA 72 bp | TATCTTCCTGGATTAACTCCCAGTGTTGAAAAGCCCTaGTGTGACAGATTTTGTGGAGCTGGTATATTGTCA | + |
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Preference number: 6 (lower is better) Translates to: YLPGLTPSVEKP*CDRFCGAGILS Trigger: TGACAATATACCAGCTCCACAAAATCTGTCACAGCAGGGCTTTTCAACACTGGGAGTTAATCCAGGAAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256010.7 ENST00000550879.1 |
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