RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NTRK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000140538

Ensembl transcript IDs: ENST00000317501.7, ENST00000355254.6, ENST00000357724.6, ENST00000360948.6, ENST00000394480.6, ENST00000540489.6, ENST00000542733.6, ENST00000557856.5, ENST00000557897.1, ENST00000558306.1, ENST00000558576.5, ENST00000558676.5, ENST00000559067.1, ENST00000559188.1, ENST00000559764.2, ENST00000560017.1, ENST00000560739.1, ENST00000626019.2, ENST00000629765.2

Found 1927 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCACTGGAGGTTGCAGGGCGACGAGGTCACTAAGAGGACAGCATaGTATCCTGGGAGAGCCAGGGAGACCCCACGCTTCCAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: PHWRLQGDEVTKRTA*YPGRARETPRFQAG
Trigger: CCCTGCTTGGAAGCGTGGGGTCTCCCTGGCTCTCCCAGGATACCATGCTGTCCTCTTAGTGACCTCGTCGCCCTGCAACCTCCAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 90 bp CACCCAACAGCAGGTCACTCTCACTCAGTCCAGGAGAGGATCCGGTaGGGTTGGCATGGCAGAGAGACCAGCCTGGGTGCCCTGGAGCGT +
Preference number: 1 (lower is better)
Translates to: HPTAGHSHSVQERIR*GWHGRETSLGALER
Trigger: ACGCTCCAGGGCACCCAGGCTGGTCTCTCTGCCATGCCAACCTCACCGGATCCTCTCCTGGACTGAGTGAGAGTGACCTGCTGTTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp CAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGTaGCAGGGAGGCCCAGAGGTCGGCCCCACTGTGGTATGTGGCAGC +
Preference number: 1 (lower is better)
Translates to: QRRSVGPGCWLPCFM*QGGPEVGPTVVCGS
Trigger: GCTGCCACATACCACAGTGGGGCCGACCTCTGGGCCTCCCTGTCACATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp CCTCCTCTTACCGCGCCGTCTCCACCTCTGCTTAGGTGCTCTCTGTaGCTCTTCCCCACTGGAGGTTGCAGGGCGACGAGGTCACTAAGA +
Preference number: 1 (lower is better)
Translates to: PPLTAPSPPLLRCSL*LFPTGGCRATRSLR
Trigger: TCTTAGTGACCTCGTCGCCCTGCAACCTCCAGTGGGGAAGAGTCACAGAGAGCACCTAAGCAGAGGTGGAGACGGCGCGGTAAGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR CCA 90 bp TTCCATGTTTCATGTGACAGGGAGGCCCAGAGGTCGGCCCCACTGTaGTATGTGGCAGCAGCCAGGAAGGCAGTGATTCCCCAGTGCTGG +
Preference number: 1 (lower is better)
Translates to: FHVSCDREAQRSAPL*YVAAARKAVIPQCW
Trigger: CCAGCACTGGGGAATCACTGCCTTCCTGGCTGCTGCCACATACCACAGTGGGGCCGACCTCTGGGCCTCCCTGTCACATGAAACATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp GGCCTGGGAGGAACACATCCTCTCCTCTCCAGCAGAGGAGATCTGTaGGGCCAGGCTGTTGGCTTCCATGTTTCATGTGACAGGGAGGCC +
Preference number: 1 (lower is better)
Translates to: GLGGTHPLLSSRGDL*GQAVGFHVSCDREA
Trigger: GGCCTCCCTGTCACATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGAGAGGATGTGTTCCTCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp TCCCTCTCTCCGGTCAGGGCTCAGGCCTCATTAAGATTCCAAGCCTaGAGCACTGGCCGCTCATTGGACATCTCCCAGAGAAGCCTCAGC +
Preference number: 1 (lower is better)
Translates to: SLSPVRAQASLRFQA*STGRSLDISQRSLS
Trigger: GCTGAGGCTTCTCTGGGAGATGTCCAATGAGCGGCCAGTGCTGCAGGCTTGGAATCTTAATGAGGCCTGAGCCCTGACCGGAGAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp ACCCTGTACTCTCCCGGCATGGCTGACTCACTTCTACTTCTGAGTTaGGTCTCGTGCAGCCCCAGAAGCTGGCTGACAGCTCTCCCGTTG +
Preference number: 1 (lower is better)
Translates to: TLYSPGMADSLLLLS*VSCSPRSWLTALPL
Trigger: CAACGGGAGAGCTGTCAGCCAGCTTCTGGGGCTGCACGAGACTCAACTCAGAAGTAGAAGTGAGTCAGCCATGCCGGGAGAGTACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp ATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCATACAATaGAGGCCCCATGGGCCAGTGGAGCTGGGAGCCAGAAGTCTACTC +
Preference number: 1 (lower is better)
Translates to: MLSTIRWAAYADFIQ*RPHGPVELGARSLL
Trigger: GAGTAGACTTCTGGCTCCCAGCTCCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 90 bp CCCCATGGGCCAGTGGAGCTGGGAGCCAGAAGTCTACTCCACCAATaGGTCAGCAAATACGGGAGAGTTTCAGGCCCTACAAATGTGCCT +
Preference number: 1 (lower is better)
Translates to: PHGPVELGARSLLHQ*VSKYGRVSGPTNVP
Trigger: AGGCACATTTGTAGGGCCTGAAACTCTCCCGTATTTGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCCACTGGCCCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 90 bp ACAGCTCAAAGGCAGATGCATCAATCCTCCCAGGGGCTGGAAACGTaGGGAGAATGCCAAGGGGCCTGGCACAGGTGCCAAGTAGATTCT +
Preference number: 1 (lower is better)
Translates to: TAQRQMHQSSQGLET*GECQGAWHRCQVDS
Trigger: AGAATCTACTTGGCACCTGTGCCAGGCCCCTTGGCATTCTCCTCACGTTTCCAGCCCCTGGGAGGATTGATGCATCTGCCTTTGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp CCCAAGATCAGCGTGAAAGCCCGTGGGCCTAAGGTGGCAGCAATCTaGCAACTGCGGTCTCCTTCAGTGCTTCTTGTTCCCCCAAGGAAT +
Preference number: 1 (lower is better)
Translates to: PKISVKARGPKVAAI*QLRSPSVLLVPPRN
Trigger: ATTCCTTGGGGGAACAAGAAGCACTGAAGGAGACCGCAGTTGTCAGATTGCTGCCACCTTAGGCCCACGGGCTTTCACGCTGATCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp GGGCAGCCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTaGAGCTGGGAGCCAGAAGTCTACTCCACCAATGAGTCAGCAAAT +
Preference number: 1 (lower is better)
Translates to: GQPMLTSYNGGPMGQ*SWEPEVYSTNESAN
Trigger: ATTTGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 90 bp CCCAGGGGCCTGAAAGTGGGAGGTGAGGCCAAGGAATCTTTGCAATaGTGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTTC +
Preference number: 1 (lower is better)
Translates to: PRGLKVGGEAKESLQ*WKRQVAVSWQGSGF
Trigger: GAAACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATTCCTTGGCCTCACCTCCCACTTTCAGGCCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp GCCCAAACTCCCTCTCCTAGGGTCAGATCTCAGCCACGGCTCCTCTaGTCCTGGAGGCTAAAAGTTTATGGACAGAGAAAGCAGAGTCAG +
Preference number: 1 (lower is better)
Translates to: AQTPSPRVRSQPRLL*SWRLKVYGQRKQSQ
Trigger: CTGACTCTGCTTTCTCTGTCCATAAACTTTTAGCCTCCAGGAGCAGAGGAGCCGTGGCTGAGATCTGACCCTAGGAGAGGGAGTTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp CCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTGGAGCTaGGAGCCAGAAGTCTACTCCACCAATGAGTCAGCAAATACGGGA +
Preference number: 1 (lower is better)
Translates to: PMLTSYNGGPMGQWS*EPEVYSTNESANTG
Trigger: TCCCGTATTTGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 90 bp CCAGAAGATACTTTTCCCTCAGGCGCCTCCAGACCATGCCCTCCCTaGACACCTGTTCTTAGCTACCCAGATCAAAGCCAGATTGTGCAG +
Preference number: 1 (lower is better)
Translates to: PEDTFPSGASRPCPP*TPVLSYPDQSQIVQ
Trigger: CTGCACAATCTGGCTTTGATCTGGGTAGCTAAGAACAGGTGTTCAGGGAGGGCATGGTCTGGAGGCGCCTGAGGGAAAAGTATCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp GCTGCTTACAATGGACACAGTAAGAACATGACCCCAAGATCAGCGTaGAAGCCCGTGGGCCTAAGGTGGCAGCAATCTGACAACTGCGGT +
Preference number: 1 (lower is better)
Translates to: AAYNGHSKNMTPRSA*KPVGLRWQQSDNCG
Trigger: ACCGCAGTTGTCAGATTGCTGCCACCTTAGGCCCACGGGCTTTCACGCTGATCTTGGGGTCATGTTCTTACTGTGTCCATTGTAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp CACCCATCTGGTGGTGTTAAAGGGTGCCGGGGCACTGGTGGCTCATaGAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCT +
Preference number: 1 (lower is better)
Translates to: HPSGGVKGCRGTGGS*SFYLASLDPKRTMP
Trigger: AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCTTTAACACCACCAGATGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR CCA 90 bp CTCCTCCCGTCCCAGAGCTCTCATCCCAAAGATTGTCTCTCTGCATaGTCCAGGTCTTCTGCTCCAAAGAGCCGTAGCATTAGAAGCATG +
Preference number: 1 (lower is better)
Translates to: LLPSQSSHPKDCLSA*SRSSAPKSRSIRSM
Trigger: CATGCTTCTAATGCTACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGATGAGAGCTCTGGGACGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp GGTTGGCTCCCTACCAAAGCAGACAATAGACATCTCAGGGGCCTTTaGGACAGCTCTCTGGACTGCTGGCAGGTGGGTTCATTCAACAAA +
Preference number: 1 (lower is better)
Translates to: GWLPTKADNRHLRGL*DSSLDCWQVGSFNK
Trigger: TTTGTTGAATGAACCCACCTGCCAGCAGTCCAGAGAGCTGTCCCAAAGGCCCCTGAGATGTCTATTGTCTGCTTTGGTAGGGAGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp AGCTTGGCCTCAGAACAGGTGTGCCCAGGTATCAGGTGTCCCACATaGCAAACATACCATTGTTCAGCAGTTGCCATAAGCCAGCTAACC +
Preference number: 1 (lower is better)
Translates to: SLASEQVCPGIRCPT*QTYHCSAVAISQLT
Trigger: GGTTAGCTGGCTTATGGCAACTGCTGAACAATGGTATGTTTGGCATGTGGGACACCTGATACCTGGGCACACCTGTTCTGAGGCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp GCAAATACGGGAGAGTTTCAGGCCCTACAAATGTGCCTTTCCTACTaGAGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAG +
Preference number: 1 (lower is better)
Translates to: ANTGEFQALQMCLSY*RRESHPLPSPQWIK
Trigger: CTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCTTCAGTAGGAAAGGCACATTTGTAGGGCCTGAAACTCTCCCGTATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR GCA 90 bp ACAGGAGCTGTGGCTGCCTCTCTTGTAAGGACCATAGGAAAGACCTaGACAAAAGACAAACACCTTGTCCTTCAGAATCCGTCTGTCCGG +
Preference number: 1 (lower is better)
Translates to: TGAVAASLVRTIGKT*TKDKHLVLQNPSVR
Trigger: CCGGACAGACGGATTCTGAAGGACAAGGTGTTTGTCTTTTGTGCAGGTCTTTCCTATGGTCCTTACAAGAGAGGCAGCCACAGCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp AGCCTCATGTTTTTAAACCCCATGGAGGCATTTGCAGAATCGGGCTaGGATCCTGACACGAAGAACCACCATCCACAGGACCCAAGAAGT +
Preference number: 1 (lower is better)
Translates to: SLMFLNPMEAFAESG*DPDTKNHHPQDPRS
Trigger: ACTTCTTGGGTCCTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGGTTTAAAAACATGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR CCA 90 bp ATGACAATCTCTGTCACTCTAAGCAGAAAGCCTGGCTCAGCATCATaGTCAGAGAAGGCCCAAACTCCCTCTCCTAGGGTCAGATCTCAG +
Preference number: 1 (lower is better)
Translates to: MTISVTLSRKPGSAS*SEKAQTPSPRVRSQ
Trigger: CTGAGATCTGACCCTAGGAGAGGGAGTTTGGGCCTTCTCTGACCATGATGCTGAGCCAGGCTTTCTGCTTAGAGTGACAGAGATTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp ATGACTACTGCCACATCATGTCTCCTTTTCCATACCTGGGAATACTaGATAGGACAGGTGGCTAGTGAGGCTACCCAGCTTGCTGTGGAC +
Preference number: 1 (lower is better)
Translates to: MTTATSCLLFHTWEY*IGQVASEATQLAVD
Trigger: GTCCACAGCAAGCTGGGTAGCCTCACTAGCCACCTGTCCTATCCAGTATTCCCAGGTATGGAAAAGGAGACATGATGTGGCAGTAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 90 bp GAAGCGAGCCCCCTCTTTGGGAGAGGGTGGCCATGGAGTAAGGCATaGGTCAAAGCAAGCAAAGTAAACACACATATTGACCAGAGAACA +
Preference number: 1 (lower is better)
Translates to: EASPLFGRGWPWSKA*VKASKVNTHIDQRT
Trigger: TGTTCTCTGGTCAATATGTGTGTTTACTTTGCTTGCTTTGACTCATGCCTTACTCCATGGCCACCCTCTCCCAAAGAGGGGGCTCGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR GCA 90 bp ACTGCAGATCTAAGGGCCCAGGAAGAGCCTGGAGAAACTCTCCTCTaGAAGGAGTTTTCTAATGTCACACTCATTGTGAGCCGTTCCAGA +
Preference number: 1 (lower is better)
Translates to: TADLRAQEEPGETLL*KEFSNVTLIVSRSR
Trigger: TCTGGAACGGCTCACAATGAGTGTGACATTAGAAAACTCCTTGCAGAGGAGAGTTTCTCCAGGCTCTTCCTGGGCCCTTAGATCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR GCA 90 bp GTAAACACACATATTGACCAGAGAACAGGAGGACACTTCCATTGGTaGCATGAGAGGGGCTGGAGGAGGCCAAGTTTTACTTCTCTTCCC +
Preference number: 1 (lower is better)
Translates to: VNTHIDQRTGGHFHW*HERGWRRPSFTSLP
Trigger: GGGAAGAGAAGTAAAACTTGGCCTCCTCCAGCCCCTCTCATGGCACCAATGGAAGTGTCCTCCTGTTCTCTGGTCAATATGTGTGTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR GCA 90 bp TGTTCAGGAGAGGATATGGGAGAAGGGAAGCAACAGGAGCATTGGTaGTTCACTTCTAACCAGAAGATACTTTTCCCTCAGGCGCCTCCA +
Preference number: 1 (lower is better)
Translates to: CSGEDMGEGKQQEHW*FTSNQKILFPQAPP
Trigger: TGGAGGCGCCTGAGGGAAAAGTATCTTCTGGTTAGAAGTGAAGCACCAATGCTCCTGTTGCTTCCCTTCTCCCATATCCTCTCCTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp CAGGGTAGGGCAGCCCATGCTCAGAGCAAAAGTTCTAATACCCAATaGAGTGACACAAACATTCACCACACCTACTATGGTCAGCAGTGC +
Preference number: 1 (lower is better)
Translates to: QGRAAHAQSKSSNTQ*SDTNIHHTYYGQQC
Trigger: GCACTGCTGACCATAGTAGGTGTGGTGAATGTTTGTGTCACTGCATTGGGTATTAGAACTTTTGCTCTGAGCATGGGCTGCCCTACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp GAGAAACTCTCCTCTGCAAGGAGTTTTCTAATGTCACACTCATTGTaGGCCGTTCCAGAGAGAAGAGGAAGTAGGGGGCAAGTATGTCCC +
Preference number: 1 (lower is better)
Translates to: EKLSSARSFLMSHSL*AVPERRGSRGQVCP
Trigger: GGGACATACTTGCCCCCTACTTCCTCTTCTCTCTGGAACGGCTCACAATGAGTGTGACATTAGAAAACTCCTTGCAGAGGAGAGTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 90 bp TGTTATGACACATCCGTAAGGGCCCTCCACAGGAGTAGAGAGACGTaGATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCC +
Preference number: 1 (lower is better)
Translates to: CYDTSVRALHRSRET*MTQHQIQWSPSAFS
Trigger: GGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTCTCTCTACTCCTGTGGAGGGCCCTTACGGATGTGTCATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
3UTR GCA 90 bp AGCAGCATCACTGGGACCTTTTCTGTCCCCAAACTTCATAGCTTCTaGTCAACTGCTGTGAAACATTGCCTCCAGATGCACACTGAGTCA +
Preference number: 1 (lower is better)
Translates to: SSITGTFSVPKLHSF*STAVKHCLQMHTES
Trigger: TGACTCAGTGTGCATCTGGAGGCAATGTTTCACAGCAGTTGAGCAGAAGCTATGAAGTTTGGGGACAGAAAAGGTCCCAGTGATGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp GGACAGGTGGCTAGTGAGGCTACCCAGCTTGCTGTGGACACTGTATaGTTTGTCTTATATTCTCTCACAACGGTACATCATCTGCCATTC +
Preference number: 1 (lower is better)
Translates to: GQVASEATQLAVDTV*FVLYSLTTVHHLPF
Trigger: GAATGGCAGATGATGTACCGTTGTGAGAGAATATAAGACAAAGCATACAGTGTCCACAGCAAGCTGGGTAGCCTCACTAGCCACCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 90 bp AGCCAAGAAGACAGAAGCCACACAGTGTTTGTTCAGGAGAGGATATaGGAGAAGGGAAGCAACAGGAGCATTGGTGCTTCACTTCTAACC +
Preference number: 1 (lower is better)
Translates to: SQEDRSHTVFVQERI*EKGSNRSIGASLLT
Trigger: GGTTAGAAGTGAAGCACCAATGCTCCTGTTGCTTCCCTTCTCCCATATCCTCTCCTGAACAAACACTGTGTGGCTTCTGTCTTCTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp CCTTTGCCTCAAGTGGGAAGCCTCTGTCTAGGAGTAATTTGTGCATaGTCTGCTGAATGGAGGAAGCAGCACCTCCTTTTTCTTGTCTCT +
Preference number: 1 (lower is better)
Translates to: PLPQVGSLCLGVICA*SAEWRKQHLLFLVS
Trigger: AGAGACAAGAAAAAGGAGGTGCTGCTTCCTCCATTCAGCAGATCATGCACAAATTACTCCTAGACAGAGGCTTCCCACTTGAGGCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp TGGGTGTGTATATGTGTGTGCCAGAGTGACAGGGTTAATGGACAATaGAAAAGACATGTAAGCAAGGCGCTAGCTCTGTGGCTGAGTCCT +
Preference number: 1 (lower is better)
Translates to: WVCICVCQSDRVNGQ*KRHVSKALALWLSP
Trigger: AGGACTCAGCCACAGAGCTAGCGCCTTGCTTACATGTCTTTTTCATTGTCCATTAACCCTGTCACTCTGGCACACACATATACACACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 90 bp TCCTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATaGCTACTGCCACATCATGTCTCCTTTTCCATACCTGGGAATACT +
Preference number: 1 (lower is better)
Translates to: SSLIFSGRSALAIGL*LLPHHVSFSIPGNT
Trigger: AGTATTCCCAGGTATGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 90 bp AGGCAATTAAATGATGCCAGCTCCAGCCCCACTCTAAGAAATCTATaGCCCATCCCCCTCTTAGTAACCACACCAATGCCTCTCTTGGAA +
Preference number: 1 (lower is better)
Translates to: RQLNDASSSPTLRNL*PIPLLVTTPMPLLE
Trigger: TTCCAAGAGAGGCATTGGTGTGGTTACTAAGAGGGGGATGGGTCATAGATTTCTTAGAGTGGGGCTGGAGCTGGCATCATTTAATTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR GCA 90 bp ACACATCCTTTGCAACTCCAGCAAGAAGCTTACACCCAGGATGGATaGTGTCAGCTCTTGTCATGGTTTTGTGTTGTGGGGTTGTCTGTT +
Preference number: 1 (lower is better)
Translates to: THPLQLQQEAYTQDG*CQLLSWFCVVGLSV
Trigger: AACAGACAACCCCACAACACAAAACCATGACAAGAGCTGACAGCATCCATCCTGGGTGTAAGCTTCTTGCTGGAGTTGCAAAGGATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp TGGGCCACCACGGGTTCCAGATGGGATTTGTGGAGACACATCACATaGATCTCAATGAGCTTTGCAGTAAAATTCACTGCACAGAGGTTA +
Preference number: 1 (lower is better)
Translates to: WATTGSRWDLWRHIT*ISMSFAVKFTAQRL
Trigger: TAACCTCTGTGCAGTGAATTTTACTGCAAAGCTCATTGAGATGCATGTGATGTGTCTCCACAAATCCCATCTGGAACCCGTGGTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp ACAGCTACATCTTTTGTCCCAGTTGGGAGAAACAGGAGCTGTGGCTaGCTCTCTTGTAAGGACCATAGGAAAGACCTGCACAAAAGACAA +
Preference number: 1 (lower is better)
Translates to: TATSFVPVGRNRSCG*LSCKDHRKDLHKRQ
Trigger: TTGTCTTTTGTGCAGGTCTTTCCTATGGTCCTTACAAGAGAGGCAGCCACAGCTCCTGTTTCTCCCAACTGGGACAAAAGATGTAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp GAACTGACCTGCACACACCTCAAATTCCCAGCCTCTGGTCCACTATaGTCAGGTCAACAGGACAATCATATCTATTTGACTCACGGTATG +
Preference number: 1 (lower is better)
Translates to: ELTCTHLKFPASGPL*SGQQDNHIYLTHGM
Trigger: CATACCGTGAGTCAAATAGATATGATTGTCCTGTTGACCTGAGCATAGTGGACCAGAGGCTGGGAATTTGAGGTGTGTGCAGGTCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 90 bp AAAGACACATCCTTTGCAACTCCAGCAAGAAGCTTACACCCAGGATaGATGCTGTCAGCTCTTGTCATGGTTTTGTGTTGTGGGGTTGTC +
Preference number: 1 (lower is better)
Translates to: KDTSFATPARSLHPG*MLSALVMVLCCGVV
Trigger: GACAACCCCACAACACAAAACCATGACAAGAGCTGACAGCATCCATCCTGGGTGTAAGCTTCTTGCTGGAGTTGCAAAGGATGTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp ACCTCCTGTGAAGAGCATAAAAATGAAGTCTCTGGCTTGTCTGCCTaGCTCCCTGTACAATATTCCTCAAATCTACCAGTCACCAGGCCT +
Preference number: 1 (lower is better)
Translates to: TSCEEHKNEVSGLSA*LPVQYSSNLPVTRP
Trigger: AGGCCTGGTGACTGGTAGATTTGAGGAATATTGTACAGGGAGCCAGGCAGACAAGCCAGAGACTTCATTTTTATGCTCTTCACAGGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp TTAACTTCAACACCCATAGATTCCGATGAAGACACATGTTTGCCTTaGGATGGAAGCATGAGGGTGAAGAATGGGGTGATGGGTATGGGG +
Preference number: 1 (lower is better)
Translates to: LTSTPIDSDEDTCLP*DGSMRVKNGVMGMG
Trigger: CCCCATACCCATCACCCCATTCTTCACCCTCATGCTTCCATCCCAAGGCAAACATGTGTCTTCATCGGAATCTATGGGTGTTGAAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp CTAGACACTAAAGAAAGACTCCTCTTTGATATTTTCTGGCAGGTCTaGCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTT +
Preference number: 1 (lower is better)
Translates to: LDTKERLLFDIFWQV*PGHRSMTTATSCLL
Trigger: AAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAGGAGTCTTTCTTTAGTGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 90 bp CAAACTGTTTGTGGCTCTGGGATTCACCTTGTATTAAGACTTTCGTaGAGTTTGAGAAGCTGGATTGTCAGTCCCATGGAAGCAGGAGGA +
Preference number: 1 (lower is better)
Translates to: QTVCGSGIHLVLRLS*SLRSWIVSPMEAGG
Trigger: TCCTCCTGCTTCCATGGGACTGACAATCCAGCTTCTCAAACTCCACGAAAGTCTTAATACAAGGTGAATCCCAGAGCCACAAACAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp TGCAATTTCAGCTTTGAGGTTCTATGTGGCTGTTGTGCCACAATGTaGAATTATAGAGTGAGTCTGGCTCATTCTGGAGCCAACCACTCC +
Preference number: 1 (lower is better)
Translates to: CNFSFEVLCGCCATM*NYRVSLAHSGANHS
Trigger: GGAGTGGTTGGCTCCAGAATGAGCCAGACTCACTCTATAATTCCACATTGTGGCACAACAGCCACATAGAACCTCAAAGCTGAAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp GGCATTCGAAGCGGCCTGGGTGAGATTGGAGACCACTATTCTAAGTaGAGCAATTCAGGAATAGAAAACCAAACATCGTACGTTCTCACT +
Preference number: 1 (lower is better)
Translates to: GIRSGLGEIGDHYSK*SNSGIENQTSYVLT
Trigger: AGTGAGAACGTACGATGTTTGGTTTTCTATTCCTGAATTGCTTCACTTAGAATAGTGGTCTCCAATCTCACCCAGGCCGCTTCGAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp TGTGATTGTTTAAGGCAAAAACAGCTGTTAAAGAGCACTCAGGGTTaGAGGGTGGATGCTGAGAATCAGAGAAGTGCCCCCAATGAGTCT +
Preference number: 1 (lower is better)
Translates to: CDCLRQKQLLKSTQG*RVDAENQRSAPNES
Trigger: AGACTCATTGGGGGCACTTCTCTGATTCTCAGCATCCACCCTTCAACCCTGAGTGCTCTTTAACAGCTGTTTTTGCCTTAAACAATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp GGCTCATTCTGGAGCCAACCACTCCTTAAAGAGATGACAAACCAGTaGTTAGAAAACAGCTACATCTTTTGTCCCAGTTGGGAGAAACAG +
Preference number: 1 (lower is better)
Translates to: GSFWSQPLLKEMTNQ*LENSYIFCPSWEKQ
Trigger: CTGTTTCTCCCAACTGGGACAAAAGATGTAGCTGTTTTCTAAGCACTGGTTTGTCATCTCTTTAAGGAGTGGTTGGCTCCAGAATGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATaGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATGGA +
Preference number: 1 (lower is better)
Translates to: EAFGKLLGYEGNAFI*KRCQRDLLTLLPYG
Trigger: TCCATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 90 bp CATCAAGATAGAACTGACCTGCACACACCTCAAATTCCCAGCCTCTaGTCCACTATGCTCAGGTCAACAGGACAATCATATCTATTTGAC +
Preference number: 1 (lower is better)
Translates to: HQDRTDLHTPQIPSL*STMLRSTGQSYLFD
Trigger: GTCAAATAGATATGATTGTCCTGTTGACCTGAGCATAGTGGACCAGAGGCTGGGAATTTGAGGTGTGTGCAGGTCAGTTCTATCTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR GCA 90 bp TCTGTCCCCAAACTTCATAGCTTCTGCTCAACTGCTGTGAAACATTaGCTCCAGATGCACACTGAGTCAAACATAGACTTGTACATTGTG +
Preference number: 1 (lower is better)
Translates to: SVPKLHSFCSTAVKH*LQMHTESNIDLYIV
Trigger: CACAATGTACAAGTCTATGTTTGACTCAGTGTGCATCTGGAGGCAATGTTTCACAGCAGTTGAGCAGAAGCTATGAAGTTTGGGGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp GTGCTATATAAAAACTGGCCAATCACAAAGCAATGTGACAACATGTaGTTCTGCTACCCTTGTTTTCTCAGTACACCCTTCAGTCTGGCC +
Preference number: 1 (lower is better)
Translates to: VLYKNWPITKQCDNM*FCYPCFLSTPFSLA
Trigger: GGCCAGACTGAAGGGTGTACTGAGAAAACAAGGGTAGCAGAAGCACATGTTGTCACATTGCTTTGTGATTGGCCAGTTTTTATATAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp CTAAGATCTAACCTGTCCTCTCTCCAAAGTTGGCAACAGATAACATaGTTCCTTTCCTCATCTGTTCCAGCCCATTTGGATAATGCTCAG +
Preference number: 1 (lower is better)
Translates to: LRSNLSSLQSWQQIT*FLSSSVPAHLDNAQ
Trigger: CTGAGCATTATCCAAATGGGCTGGAACAGATGAGGAAAGGAAGCATGTTATCTGTTGCCAACTTTGGAGAGAGGACAGGTTAGATCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR GCA 90 bp GGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATaGCAGAGAGATCTGTTAACCCTTCTGCCATATGGAGAAGACACA +
Preference number: 1 (lower is better)
Translates to: GKLLGYEGNAFIWKR*QRDLLTLLPYGEDT
Trigger: TGTGTCTTCTCCATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 90 bp ATGCATGCACACAAAGATCAACGGAAGCGACACAAATGGGGCATATaGATTTGTATACCAGTAGGATTGTGGAGGCTTTTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: MHAHKDQRKRHKWGI*ICIPVGLWRLLCVC
Trigger: ACACACACACAAAAGCCTCCACAATCCTACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGTGCATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp TCAGAAACATTTCTCCGTGGGAATCCCACTCACACGTATTTTTGTTaGCACTTGGGCCTATTAAAGGTGTGGTCTAGCATTTGCTCTTCA +
Preference number: 1 (lower is better)
Translates to: SETFLRGNPTHTYFC*HLGLLKVWSSICSS
Trigger: TGAAGAGCAAATGCTAGACCACACCTTTAATAGGCCCAAGTGCCAACAAAAATACGTGTGAGTGGGATTCCCACGGAGAAATGTTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp AAATATGGTCTAGACACTAAAGAAAGACTCCTCTTTGATATTTTCTaGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCA +
Preference number: 1 (lower is better)
Translates to: KYGLDTKERLLFDIF*QVCPGHRSMTTATS
Trigger: TGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAGGAGTCTTTCTTTAGTGTCTAGACCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR GCA 90 bp CTCCCGTTGGTGTTGGTTTCTGCAGTATTTAGCACCAAAATGACTTaGACTAGTGTATTCCGCAAAGTAGGCATCACTAGAGAAGAACAT +
Preference number: 1 (lower is better)
Translates to: LPLVLVSAVFSTKMT*TSVFRKVGITREEH
Trigger: ATGTTCTTCTCTAGTGATGCCTACTTTGCGGAATACACTAGTGCAAGTCATTTTGGTGCTAAATACTGCAGAAACCAACACCAACGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp TTTTTCCAAGATCTCTCAGCAGGAAATAGAAATGTGCAAGTTCTCTaGCTCCTATTCCCATTATCCTCCCTCTACCACACTTTCCATCTG +
Preference number: 1 (lower is better)
Translates to: FFQDLSAGNRNVQVL*LLFPLSSLYHTFHL
Trigger: CAGATGGAAAGTGTGGTAGAGGGAGGATAATGGGAATAGGAGGCAGAGAACTTGCACATTTCTATTTCCTGCTGAGAGATCTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp AGGTATCAGGTGTCCCACATGCCAAACATACCATTGTTCAGCAGTTaGCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTATGCA +
Preference number: 1 (lower is better)
Translates to: RYQVSHMPNIPLFSS*HKPANPSDCQYIYA
Trigger: TGCATAAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATGGTATGTTTGGCATGTGGGACACCTGATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp TCATTGCAAATGCATGCACACAAAGATCAACGGAAGCGACACAAATaGGGCATATGGATTTGTATACCAGTAGGATTGTGGAGGCTTTTG +
Preference number: 1 (lower is better)
Translates to: SLQMHAHKDQRKRHK*GIWICIPVGLWRLL
Trigger: CAAAAGCCTCCACAATCCTACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGTGCATGCATTTGCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp GGTCTTCTAAAAGGTGGACTTTGGTATGGGAAAATGAGGGTGAAATaGACTGGAGTGGCCATATTGGCTAATAGGATGTCATTTCACAAC +
Preference number: 1 (lower is better)
Translates to: GLLKGGLWYGKMRVK*TGVAILANRMSFHN
Trigger: GTTGTGAAATGACATCCTATTAGCCAATATGGCCACTCCAGTTCATTTCACCCTCATTTTCCCATACCAAAGTCCACCTTTTAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp TTCTGCTTTGTGTGCCGAATCATTCGGTCCAATTTTCTCACTGTTTaGAGTCCAAACTGTTTGTGGCTCTGGGATTCACCTTGTATTAAG +
Preference number: 1 (lower is better)
Translates to: FCFVCRIIRSNFLTV*SPNCLWLWDSPCIK
Trigger: CTTAATACAAGGTGAATCCCAGAGCCACAAACAGTTTGGACTTCAAACAGTGAGAAAATTGGACCGAATGATTCGGCACACAAAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp TTCCTAACCAAGCCAGAAGGATGGTTTGACTTCAAAAAGACAGACTaGGGCATTATAATAGGCTTGTTGTCCCAGAGTCTCTTGTGCAAA +
Preference number: 1 (lower is better)
Translates to: FLTKPEGWFDFKKTD*GIIIGLLSQSLLCK
Trigger: TTTGCACAAGAGACTCTGGGACAACAAGCCTATTATAATGCCTCAGTCTGTCTTTTTGAAGTCAAACCATCCTTCTGGCTTGGTTAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp AATCAGAAAGCTTTTCTAAGATCTAACCTGTCCTCTCTCCAAAGTTaGCAACAGATAACATGCTTCCTTTCCTCATCTGTTCCAGCCCAT +
Preference number: 1 (lower is better)
Translates to: NQKAFLRSNLSSLQS*QQITCFLSSSVPAH
Trigger: ATGGGCTGGAACAGATGAGGAAAGGAAGCATGTTATCTGTTGCCAACTTTGGAGAGAGGACAGGTTAGATCTTAGAAAAGCTTTCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 90 bp GATCTGTTAACCCTTCTGCCATATGGAGAAGACACAGCAAGCAGATaGCCATCTATAAATGAGGAAGCAGACCTTTACCAGACAATTAAT +
Preference number: 1 (lower is better)
Translates to: DLLTLLPYGEDTASR*PSINEEADLYQTIN
Trigger: ATTAATTGTCTGGTAAAGGTCTGCTTCCTCATTTATAGATGGCCATCTGCTTGCTGTGTCTTCTCCATATGGCAGAAGGGTTAACAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 90 bp CTCATCTTAAGATTATTTTCCCATGTACAAATGCTGGTCCTGGCATaGACAGGGTACCACTTAAAAATCATTATCCCTTCAGATGCTCCC +
Preference number: 1 (lower is better)
Translates to: LILRLFSHVQMLVLA*TGYHLKIIIPSDAP
Trigger: GGGAGCATCTGAAGGGATAATGATTTTTAAGTGGTACCCTGTTCATGCCAGGACCAGCATTTGTACATGGGAAAATAATCTTAAGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp CCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTaGACAGTAGTCCGAAACAGAGGTGTTGCTTTTCTACACAAGAAA +
Preference number: 1 (lower is better)
Translates to: PIWTLISKAGMLFVY*TVVRNRGVAFLHKK
Trigger: TTTCTTGTGTAGAAAAGCAACACCTCTGTTTCGGACTACTGTTCAGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp CAATGCAGTGACACAAACATTCACCACACCTACTATGGTCAGCAGTaGCTTTCAGAAAGAGCAATCAATGATCAAAATCTCACATTCTCT +
Preference number: 1 (lower is better)
Translates to: QCSDTNIHHTYYGQQ*LSERAINDQNLTFS
Trigger: AGAGAATGTGAGATTTTGATCATTGATTGCTCTTTCTGAAAGGCACTGCTGACCATAGTAGGTGTGGTGAATGTTTGTGTCACTGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp CAGATGGGATTTGTGGAGACACATCACATGCATCTCAATGAGCTTTaGAGTAAAATTCACTGCACAGAGGTTAATCTAGATGTCAACATC +
Preference number: 1 (lower is better)
Translates to: QMGFVETHHMHLNEL*SKIHCTEVNLDVNI
Trigger: GATGTTGACATCTAGATTAACCTCTGTGCAGTGAATTTTACTGCAAAGCTCATTGAGATGCATGTGATGTGTCTCCACAAATCCCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp TACTCATCCATAAAAAGGAATGAATTAATGGCATTCGAAGCGGCCTaGGTGAGATTGGAGACCACTATTCTAAGTGAAGCAATTCAGGAA +
Preference number: 1 (lower is better)
Translates to: YSSIKRNELMAFEAA*VRLETTILSEAIQE
Trigger: TTCCTGAATTGCTTCACTTAGAATAGTGGTCTCCAATCTCACCCAGGCCGCTTCGAATGCCATTAATTCATTCCTTTTTATGGATGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp CCCACTCACACGTATTTTTGTTGGCACTTGGGCCTATTAAAGGTGTaGTCTAGCATTTGCTCTTCACTCATCTTAAGATTATTTTCCCAT +
Preference number: 1 (lower is better)
Translates to: PTHTYFCWHLGLLKV*SSICSSLILRLFSH
Trigger: ATGGGAAAATAATCTTAAGATGAGTGAAGAGCAAATGCTAGACCACACCTTTAATAGGCCCAAGTGCCAACAAAAATACGTGTGAGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp ATCCAAATGATAGGAAGCAATCATGATCAGCACTTTCCAGAAGCCTaGGAGAAAAACAAACGAGCATCACGTAGGAGTATTTCTAAGTCA +
Preference number: 1 (lower is better)
Translates to: IQMIGSNHDQHFPEA*EKNKRASRRSISKS
Trigger: TGACTTAGAAATACTCCTACGTGATGCTCGTTTGTTTTTCTCCCAGGCTTCTGGAAAGTGCTGATCATGATTGCTTCCTATCATTTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp ATGTTAAGTTATCAACTTTGGGATCCAAATGATAGGAAGCAATCATaGTCAGCACTTTCCAGAAGCCTGGGAGAAAAACAAACGAGCATC +
Preference number: 1 (lower is better)
Translates to: MLSYQLWDPNDRKQS*SALSRSLGEKQTSI
Trigger: GATGCTCGTTTGTTTTTCTCCCAGGCTTCTGGAAAGTGCTGATCATGATTGCTTCCTATCATTTGGATCCCAAAGTTGATAACTTAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 90 bp ATTGGCAAAATTCCTCTCAGGGAACGTAATATCCTAATAATGCACTaGAGTAGGTACCAGCTGATTTTCCAGATATTGAAAGTTTGCTGC +
Preference number: 1 (lower is better)
Translates to: IGKIPLRERNILIMH*SRYQLIFQILKVCC
Trigger: GCAGCAAACTTTCAATATCTGGAAAATCAGCTGGTACCTACTTCAGTGCATTATTAGGATATTACGTTCCCTGAGAGGAATTTTGCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp TATTTTTGTTGGCACTTGGGCCTATTAAAGGTGTGGTCTAGCATTTaGTCTTCACTCATCTTAAGATTATTTTCCCATGTACAAATGCTG +
Preference number: 1 (lower is better)
Translates to: YFCWHLGLLKVWSSI*SSLILRLFSHVQML
Trigger: CAGCATTTGTACATGGGAAAATAATCTTAAGATGAGTGAAGAGCAAATGCTAGACCACACCTTTAATAGGCCCAAGTGCCAACAAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 90 bp GTCTTATATTCTCTCACAACGGTACATCATCTGCCATTCTTTGGTTaGACAACAAACAAGTCATTTTCTAACAACCAAGGTCATTTCTCA +
Preference number: 1 (lower is better)
Translates to: VLYSLTTVHHLPFFG*TTNKSFSNNQGHFS
Trigger: TGAGAAATGACCTTGGTTGTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGTTGTGAGAGAATATAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR GCA 90 bp ACACTGTATGCTTTGTCTTATATTCTCTCACAACGGTACATCATCTaGCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACAACC +
Preference number: 1 (lower is better)
Translates to: TLYALSYILSQRYII*HSLVAQQTSHFLTT
Trigger: GGTTGTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGTTGTGAGAGAATATAAGACAAAGCATACAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 90 bp CTTGTTGTGCCTGTTAACATATCAGGTCAAACTTTCTCTACCTGGTaGGTTATTCCCCAAATGATATCTCTGAAATCCTTAAATAATCAG +
Preference number: 1 (lower is better)
Translates to: LVVPVNISGQTFSTW*VIPQMISLKSLNNQ
Trigger: CTGATTATTTAAGGATTTCAGAGATATCATTTGGGGAATAACTCACCAGGTAGAGAAAGTTTGACCTGATATGTTAACAGGCACAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 90 bp TTGCACACATATGTTTATAGCAGCACAATTTGCAATTGCAAAAAGTaGAATCAACCCAAATGCCCATCAATCAATGAGCAGATAAAGAAA +
Preference number: 1 (lower is better)
Translates to: LHTYVYSSTICNCKK*NQPKCPSINEQIKK
Trigger: TTTCTTTATCTGCTCATTGATTGATGGGCATTTGGGTTGATTCCACTTTTTGCAATTGCAAATTGTGCTGCTATAAACATATGTGTGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp AACAGCAGGTCACTCTCACTCAGTCCAGGAGAGGATCCGGTGAGGTaGGCATGGCAGAGAGACCAGCCTGGGTGCCCTGGAGCGTTCATC +
Preference number: 2 (lower is better)
Translates to: NSRSLSLSPGEDPVR*AWQRDQPGCPGAFI
Trigger: GATGAACGCTCCAGGGCACCCAGGCTGGTCTCTCTGCCATGCCAACCTCACCGGATCCTCTCCTGGACTGAGTGAGAGTGACCTGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGGGCAACCCTGCCAGTaGTGGATGGGGGAAAACACC +
Preference number: 2 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRGQPCQ*WMGENT
Trigger: GGTGTTTTCCCCCATCCACCACTGGCAGGGTTGCCC...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR-3UTR TCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATCAGGGGCTGGAAACGTaGGGAGAATGCCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: SSPAEEICGARLLASMFHQGLET*GECQGA
Trigger: GGCCCCTTGGCATTCTCCTCACGTTTCCAGCCCCTG...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCGGTGGTGTTAAAGGGTaGCGGGGCACTGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: TMPRASNLSEGPAYQGDIGGVKG*RGTGGS
Trigger: TGAGCCACCAGTGCCCCGGCACCCTTTAACACCACC...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACCCAGGACGTCCAGGCTaGCGGCAGTCTCTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHPGRPG*RQSLQL
Trigger: CAGCTGAAGAGACTGCCGGCAGCCTGGACGTCCTGG...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp ATGGGGAAGAAGTGGAGGCAAGGACCCTGCTCAGGCATCATTTCTTaGCTGAGCACAGCCATGCAGTCCCCACATGTGCCTGTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: MGKKWRQGPCSGIIS*LSTAMQSPHVPVVS
Trigger: GCTCACCACAGGCACATGTGGGGACTGCATGGCTGTGCTCAGCAAAGAAATGATGCCTGAGCAGGGTCCTTGCCTCCACTTCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTCAGGAGAGGATCCGGTaGGGTTGGCATGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVQERIR*GWHGRE
Trigger: CTCTCTGCCATGCCAACCTCACCGGATCCTCTCCTG...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACTGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 2 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558306.1
3UTR-3UTR GCA 90 bp CCTACAAATGTGCCTTTCCTACTGAAGAAGGGAAAGTCACCCCCTTCCCTCTCCGGGAAGGGGCAACCCTaGCAGTGGTGGATGGGGGAA +
Preference number: 2 (lower is better)
Translates to: PTNVPFLLKKGKSPPSLSGKGQP*QWWMGE
Trigger: TTCCCCCATCCACCACTGGCAGGGTTGCCCCTTCCC...GGAGAGGGAAGGGGGTGACTTTCCCTTCTTCAGTAGGAAAGGCACATTTGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CCA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCCCTGCCAGTGGTGGATaGGGGAAAACACCCATCTGG +
Preference number: 2 (lower is better)
Translates to: TMPRASNLSEGPAYQGDIPASGG*GKTPIW
Trigger: CCAGATGGGTGTTTTCCCCCATCCACCACTGGCAGG...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR-3UTR TCA 90 bp CCTACAAATGTGCCTTTCCTACTGAAGAAGGGAAAGTCACCCCCTTCCCTCTCCTCCAAGCAGGGAAAGTaGGGCTGGAGCACGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PTNVPFLLKKGKSPPSLSSKQGK*GWSTAG
Trigger: TCCAGCCGTGCTCCAGCCTCACTTTCCCTGCTTGGA...GGAGAGGGAAGGGGGTGACTTTCCCTTCTTCAGTAGGAAAGGCACATTTGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR TCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTAGGGGAACAGCCTGGTaGAACGCAGGCAAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVRGTAW*NAGKWL
Trigger: TAGCCACTTGCCTGCGTTTCACCAGGCTGTTCCCCT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp ATGCTCCCAGTTTCATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCAGTGACTCTTCCCCACTaGAGGTTGCAGGGCGACGAG +
Preference number: 2 (lower is better)
Translates to: MLPVSCSPPLGGQPMLTSVTLPH*RLQGDE
Trigger: CTCGTCGCCCTGCAACCTCCAGTGGGGAAGAGTCAC...TGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCATGAAACTGGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGAATGCCAAGGGGCCTaGCACAGGTGCCAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: SSPAEEICGARLLASMFHECQGA*HRCQVD
Trigger: ATCTACTTGGCACCTGTGCCAGGCCCCTTGGCATTC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTCCCGTGGGCCTAAGGTaGCAGCAATCTGACAACTGC +
Preference number: 2 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVPVGLR*QQSDNC
Trigger: GCAGTTGTCAGATTGCTGCCACCTTAGGCCCACGGG...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACCCCAGCCTACCAAGGTaGCATCAAAACAAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDPSLPR*HQNKEA
Trigger: AGCCTCCTTGTTTTGATGTCACCTTGGTAGGCTGGG...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR-3UTR CCA 90 bp CCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTTGTCGGCAACCCTGCCAGTGGTaGATGGGGGAAAACACCCAT +
Preference number: 2 (lower is better)
Translates to: PSRMASSWVKPPAAKACRQPCQW*MGENTH
Trigger: ATGGGTGTTTTCCCCCATCCACCACTGGCAGGGTTG...CCGACAAGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CCA 90 bp AACCCCATGGAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACAGGCTGGAGCACGGCTaGACTTCATCAGGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: NPMEAFAESGWDPDTKNHRLEHG*TSSGFL
Trigger: AAGAAAGCCTGATGAAGTCCAGCCGTGCTCCAGCCT...GTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR CAA 90 bp TCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTaGCAATGGGATCTTGAATCCCTAGAGGATTGCAGAGCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SFRIRLSGLDAVMTL*QWDLESLEDCRAQS
Trigger: GCTCTGGGCTCTGCAATCCTCTAGGGATTCAAGATCCCATTGCAACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCAGCCAGGAAGGCAGTaGTTCCCCAGTGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTQPGRQ*FPSAGA
Trigger: TGCCCCAGCACTGGGGAATCACTGCCTTCCTGGCTG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCACTTCCATGTTTCATGTaGCAGGGAGGCCCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: LVGFDPELISSGLHERWALPCFM*QGGPEV
Trigger: GACCTCTGGGCCTCCCTGTCACATGAAACATGGAAG...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCACTCTCCCGGCATGGCTaGCTCACTTCTACTTCTGAG +
Preference number: 2 (lower is better)
Translates to: LVGFDPELISSGLHERWALSRHG*LTSTSE
Trigger: CTCAGAAGTAGAAGTGAGTCAGCCATGCCGGGAGAG...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CCTACAAATGTGCCTTTCCTACTGAAGAAGGGAAAGTCACCCCCTTCCCTCTCCGTGCCGGGGCACTGGTaGCTCATGCAGTTTCTACTT +
Preference number: 2 (lower is better)
Translates to: PTNVPFLLKKGKSPPSLSVPGHW*LMQFLL
Trigger: AAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCAC...GGAGAGGGAAGGGGGTGACTTTCCCTTCTTCAGTAGGAAAGGCACATTTGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CCA 90 bp TGTGGTCCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTGAGCACAGTGATGATTaGAGGGAAGGGGCAACCCTG +
Preference number: 2 (lower is better)
Translates to: CGPSRMASSWVKPPAAKAEHSDD*REGATL
Trigger: CAGGGTTGCCCCTTCCCTCCAATCATCACTGTGCTC...AGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR CAA 90 bp TTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTaGTTGCAATGGGATCTTGAATCCCTAGAGGATTGCAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: LSFRIRLSGLDAVMT*LQWDLESLEDCRAQ
Trigger: CTGGGCTCTGCAATCCTCTAGGGATTCAAGATCCCATTGCAACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGGTGGTGTTAAAGGGTaGCGGGGCACTGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: YLASLDPKRTMPRASNLSGGVKG*RGTGGS
Trigger: TGAGCCACCAGTGCCCCGGCACCCTTTAACACCACC...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR-3UTR GCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGGGAAGCCGACCAAATaGTCCCCTCCTGGCTTACAG +
Preference number: 2 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLGKPTK*SPPGLQ
Trigger: CTGTAAGCCAGGAGGGGAGCATTTGGTCGGCTTCCC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCAGCCTCTGGTCCACTATaGTCAGGTCAACAGGACAAT +
Preference number: 2 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPASGPL*SGQQDN
Trigger: ATTGTCCTGTTGACCTGAGCATAGTGGACCAGAGGC...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CCA 90 bp CTATACACTGAACACTCCTATAAGTCTCTGTGGAAACACAACGCCCCATTGTCAAGCGAGCCCCCTCTTTaGGAGAGGGTGGCCATGGAG +
Preference number: 2 (lower is better)
Translates to: LYTEHSYKSLWKHNAPLSSEPPL*ERVAME
Trigger: CTCCATGGCCACCCTCTCCCAAAGAGGGGGCTCGCT...TGACAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGAGTGTTCAGTGTATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAAGGGGCCCCGTGGCCTaGGAGGAACACATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILRGPVA*EEHILS
Trigger: GGAGAGGATGTGTTCCTCCCAGGCCACGGGGCCCCT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCACAAATTCCCAGCCTCTaGTCCACTATGCTCAGGTCA +
Preference number: 2 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPQIPSL*STMLRS
Trigger: TGACCTGAGCATAGTGGACCAGAGGCTGGGAATTTG...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 90 bp GTCTCGTGCAGCCCCAGAAGCTGGCTGACAGCTCTCCCGTTGGTGTaGGTTTCTGCAGTATTTAGCACCAAAATGACTTGCACTAGTGTA +
Preference number: 2 (lower is better)
Translates to: VSCSPRSWLTALPLV*VSAVFSTKMTCTSV
Trigger: TACACTAGTGCAAGTCATTTTGGTGCTAAATACTGCAGAAACCAACACCAACGGGAGAGCTGTCAGCCAGCTTCTGGGGCTGCACGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACCATCCACAGTTCCATTCTTTCCTCTaGGACCTAACTTGGTGCCAA +
Preference number: 2 (lower is better)
Translates to: EAFAESGWDPDTKNHHPQFHSFL*DLTWCQ
Trigger: TTGGCACCAAGTTAGGTCTCAGAGGAAAGAATGGAA...CTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR GCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATACACCCAGGATGGATaGTGTCAGCTCTTGTCATGG +
Preference number: 2 (lower is better)
Translates to: LVGFDPELISSGLHERWAYTQDG*CQLLSW
Trigger: CCATGACAAGAGCTGACAGCATCCATCCTGGGTGTA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTGCCTTCAGCGGCAACTaGCCCCCACCTATGCAAGGC +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSAFSGN*PPPMQG
Trigger: GCCTTGCATAGGTGGGGGGCAGTTGCCGCTGAAGGC...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCACTACTTAACTTCCAATaGACCCTGTACTCTCCCGGC +
Preference number: 2 (lower is better)
Translates to: LVGFDPELISSGLHERWALLNFQ*TLYSPG
Trigger: GCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAG...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTTCCCTGCAGTGCTGGTaGCGTCTATACCAACCCCCA +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTSLQCW*RLYQPP
Trigger: TGGGGGTTGGTATAGACGCCACCAGCACTGCAGGGA...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGAAAGGCGCTAGCTCTGTaGCTGAGTCCTGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRKALAL*LSPAAG
Trigger: CCCAGCTGCAGGACTCAGCCACAGAGCTAGCGCCTT...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 90 bp ACAGGTGTGCCCAGGTATCAGGTGTCCCACATGCCAAACATACCATaGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAA +
Preference number: 2 (lower is better)
Translates to: TGVPRYQVSHMPNIP*FSSCHKPANPSDCQ
Trigger: TTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATGGTATGTTTGGCATGTGGGACACCTGATACCTGGGCACACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp AGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAGTTGAAAATGGGGATGTCACACTCATTGTaGGCCGTTCCAGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: RRESHPLPSPQWIKLKMGMSHSL*AVPERR
Trigger: TCTTCTCTCTGGAACGGCTCACAATGAGTGTGACAT...CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR TCA 90 bp ATGCTCCCAGTTTCATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCAAGTCTACTCCACCAATaGGTCAGCAAATACGGGAGA +
Preference number: 2 (lower is better)
Translates to: MLPVSCSPPLGGQPMLTSSLLHQ*VSKYGR
Trigger: TCTCCCGTATTTGCTGACTCATTGGTGGAGTAGACT...TGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCATGAAACTGGGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGAGGCAACAGAGTATaGATTCATGACCACCAGCCA +
Preference number: 2 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGGNRV*IHDHQP
Trigger: TGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
3UTR-3UTR TCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAACCCCAAGATCAGCGTaGAAGCCCGTGGGCCTAAGG +
Preference number: 2 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTTPRSA*KPVGLR
Trigger: CCTTAGGCCCACGGGCTTTCACGCTGATCTTGGGGT...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTGGAAGGTTGACTAGCTaGGGGGAACAGCCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTGRLTS*GEQPGE
Trigger: TTCACCAGGCTGTTCCCCTCAGCTAGTCAACCTTCC...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTTCCAGTGGCCTGCATaGGAGATGGGCAGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSFQWPA*EMGRPL
Trigger: GAGAGGCCTGCCCATCTCTCATGCAGGCCACTGGAA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGAGAACTCCTGACCTCGTaGTCCATCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRELLTS*SIHLSL
Trigger: GAGGCTGAGGTGGATGGATCACGAGGTCAGGAGTTC...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCCCAGTGCTCTTCTCCTaGCCCATGCTAACCGTTTTG +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTPVLFS*PMLTVL
Trigger: CAAAACGGTTAGCATGGGGCAGGAGAAGAGCACTGG...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTATACACTGAACACTCCTATAAGTCTCTGTGGAAACACAACGCCCCATTGTCAAGGGTGCCGGGGCACTaGTGGCTCATGCAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: LYTEHSYKSLWKHNAPLSRVPGH*WLMQFL
Trigger: TAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT...TGACAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGAGTGTTCAGTGTATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGCACAGTGATGATTaGAGGGAAGGGGCAACCCTG +
Preference number: 2 (lower is better)
Translates to: YLASLDPKRTMPRASNLSEHSDD*REGATL
Trigger: CAGGGTTGCCCCTTCCCTCCAATCATCACTGTGCTC...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR-3UTR CCA 90 bp CTATACACTGAACACTCCTATAAGTCTCTGTGGAAACACAACGCCCCATTGTCAGGAGGACACTTCCATTaGTGCCATGAGAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LYTEHSYKSLWKHNAPLSGGHFH*CHERGW
Trigger: CCAGCCCCTCTCATGGCACCAATGGAAGTGTCCTCC...TGACAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGAGTGTTCAGTGTATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CCA 90 bp ATGCTCCCAGTTTCATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCACTTCCCTCTCCTCAGTaGATCAAGTTGAAAATGGGG +
Preference number: 2 (lower is better)
Translates to: MLPVSCSPPLGGQPMLTSLPSPQ*IKLKMG
Trigger: CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAG...TGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCATGAAACTGGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTCCTGGCTCCCTTCCTTaGCAGTGGGGTTTACCTGGG +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSPGSLP*QWGLPG
Trigger: CCCAGGTAAACCCCACTGCCAAGGAAGGGAGCCAGG...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACCCCACTGTGGTATGTaGCAGCAGCCAGGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILPHCGM*QQPGRQ
Trigger: CTGCCTTCCTGGCTGCTGCCACATACCACAGTGGGG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTAGGTCGGCCCCACTGTaGTATGTGGCAGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFRSAPL*YVAAAR
Trigger: CCTGGCTGCTGCCACATACCACAGTGGGGCCGACCT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCCTACCCAGCTTGCTGTaGACACTGTATGCTTTGTCT +
Preference number: 2 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTALPSLL*TLYALS
Trigger: AGACAAAGCATACAGTGTCCACAGCAAGCTGGGTAG...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 90 bp AGAAGCTTACACCCAGGATGGATGCTGTCAGCTCTTGTCATGGTTTaGTGTTGTGGGGTTGTCTGTTCTGTGTTTACCCGTAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: RSLHPGWMLSALVMV*CCGVVCSVFTRRCH
Trigger: ATGGCACCTACGGGTAAACACAGAACAGACAACCCCACAACACAAAACCATGACAAGAGCTGACAGCATCCATCCTGGGTGTAAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCACCCAGCCCACAAAAGTaGTTTCTCAGCCCCTGCGTT +
Preference number: 2 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISPSPQK*FLSPCV
Trigger: AACGCAGGGGCTGAGAAATCACTTTTGTGGGCTGGG...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTCTAGAGGAGGTTCAGTaGTGCCCAAGGTCCCCTCAG +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSLEEVQ*CPRSPQ
Trigger: CTGAGGGGACCTTGGGCATCACTGAACCTCCTCTAG...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTCATCCTCCAGAACCATaGGAAATAAACTTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPHPPEP*EINFSF
Trigger: AAAACTGAAGTTTATTTCTCATGGTTCTGGAGGATG...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR TCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCAATGGCCATCTATAAATaGGGAAGCAGACCTTTACCA +
Preference number: 2 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPMAIYK*GSRPLP
Trigger: TGGTAAAGGTCTGCTTCCTCATTTATAGATGGCCAT...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTGGCACTGGTGGCTCATaGAGTTTCTACTTAGCATCC +
Preference number: 2 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPGTGGS*SFYLAS
Trigger: GGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCC...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR-3UTR GCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTTGGAGGCAAGGACCCTaGTCAGGCATCATTTCTTTG +
Preference number: 2 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAWRQGP*SGIISL
Trigger: CAAAGAAATGATGCCTGAGCAGGGTCCTTGCCTCCA...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTTGCAACCCTAAAGCGTaGTGTGTCTACATTCAAAGA +
Preference number: 2 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVCNPKA*CVYIQR
Trigger: TCTTTGAATGTAGACACAGCACGCTTTAGGGTTGCA...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTATACCCTTCCCTGCTCTaGCCCTCTCTCTCTGGCACT +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILYPSLL*PSLSGT
Trigger: AGTGCCAGAGAGAGAGGGGCAGAGCAGGGAAGGGTA...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAAATCCTCCCAGGGGCTaGAAACGTGAGGAGAATGCC +
Preference number: 2 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISNPPRG*KREENA
Trigger: GGCATTCTCCTCACGTTTCCAGCCCCTGGGAGGATT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTCATCTCAGGGGCCTTTaGGACAGCTCTCTGGACTGC +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSHLRGL*DSSLDC
Trigger: GCAGTCCAGAGAGCTGTCCCAAAGGCCCCTGAGATG...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCAGACACAGCAAGCAGATaGCCATCTATAAATGAGGAA +
Preference number: 2 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPDTASR*PSINEE
Trigger: TTCCTCATTTATAGATGGCCATCTGCTTGCTGTGTC...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 90 bp CAGGATGGATGCTGTCAGCTCTTGTCATGGTTTTGTGTTGTGGGGTaGTCTGTTCTGTGTTTACCCGTAGGTGCCATCATTGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: QDGCCQLLSWFCVVG*SVLCLPVGAIIDSQ
Trigger: TTGGGAATCAATGATGGCACCTACGGGTAAACACAGAACAGACAACCCCACAACACAAAACCATGACAAGAGCTGACAGCATCCATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp GGAAAGACAAGAGGAGTAATTGTCATAGGACAGCAAAGGAGTTCCTaGAGGTGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: GKTRGVIVIGQQRSS*RWSIQTAFLQSPQG
Trigger: CCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCACCTCAAGGAACTCCTTTGCTGTCCTATGACAATTACTCCTCTTGTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGAGGCAACAGAGTATaGATTCATGACCACCAGCCA +
Preference number: 2 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGGNRV*IHDHQP
Trigger: TGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
3UTR-3UTR TCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGCTAACCAGCCTCGTTaGTCCCAAATCCCAACCATG +
Preference number: 2 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISANQPR*SQIPTM
Trigger: CATGGTTGGGATTTGGGATCAACGAGGCTGGTTAGC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAGCAAAGGAGTTCCTTaGGGTGGTCAATCCAAACAG +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTSKGVP*GGQSKQ
Trigger: CTGTTTGGATTGACCACCTCAAGGAACTCCTTTGCT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTACTCACTTCTACTTCTaGGTTGAGTCTCGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTTHFYF*VESRAA
Trigger: GGCTGCACGAGACTCAACTCAGAAGTAGAAGTGAGT...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTGAGCCAAAAACACAGTaGCTTCAGCACCCAAGCCCG +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSEPKTQ*LQHPSP
Trigger: CGGGCTTGGGTGCTGAAGTCACTGTGTTTTTGGCTC...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp ATGCTCCCAGTTTCATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCAATCCAAAGAGAACAATaGCTAGAGCTTCCAACCTCT +
Preference number: 2 (lower is better)
Translates to: MLPVSCSPPLGGQPMLTSIQREQ*LELPTS
Trigger: AGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGAT...TGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCATGAAACTGGGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR GCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCCAAAGATTGTCTCTCTaGATGGTCCAGGTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTQRLSL*MVQVFC
Trigger: GCAGAAGACCTGGACCATGCAGAGAGACAATCTTTG...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACAGCTCAAAGGCAGATaGATCAATCCTCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILQLKGR*INPPRG
Trigger: GCCCCTGGGAGGATTGATGCATCTGCCTTTGAGCTG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTTTAAGATTCCAAGCCTaGAGCACTGGCCGCTCATTG +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTLRFQA*STGRSL
Trigger: CAATGAGCGGCCAGTGCTGCAGGCTTGGAATCTTAA...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCAAGATAGAACTGACCTaGACACACCTCAAATTCCCA +
Preference number: 2 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAKIELT*THLKFP
Trigger: TGGGAATTTGAGGTGTGTGCAGGTCAGTTCTATCTT...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCACCCTGCAATTTCCATaGCCCTATTTTCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTTLQFP*PYFLPP
Trigger: AGGAGGCAGAAAATAGGGCCATGGAAATTGCAGGGT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAAGGTGGACTTTGGTATaGGAAAATGAGGGTGAAATG +
Preference number: 2 (lower is better)
Translates to: LVGFDPELISSGLHERWARWTLV*ENEGEM
Trigger: CATTTCACCCTCATTTTCCCATACCAAAGTCCACCT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTTGCTGCTGTTTGGTTTaGAAAAGGGGAACAAAGAAA +
Preference number: 2 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVCCCLV*KRGTKK
Trigger: TTTCTTTGTTCCCCTTTTCCAAACCAAACAGCAGCA...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTAGAAGAAAGAAGGAGTaGGCAATTGAGAACATAATA +
Preference number: 2 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPRRKKE*AIENII
Trigger: TATTATGTTCTCAATTGCCCACTCCTTCTTTCTTCT...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 90 bp GATGACAAACCAGTGCTTAGAAAACAGCTACATCTTTTGTCCCAGTaGGGAGAAACAGGAGCTGTGGCTGCCTCTCTTGTAAGGACCATA +
Preference number: 2 (lower is better)
Translates to: DDKPVLRKQLHLLSQ*GETGAVAASLVRTI
Trigger: TATGGTCCTTACAAGAGAGGCAGCCACAGCTCCTGTTTCTCCCAACTGGGACAAAAGATGTAGCTGTTTTCTAAGCACTGGTTTGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp CTTGCTCCTAGCCCAGTGCTCTTCTCCTGCCCCATGCTAACCGTTTaGGTTCACGTTCTAATTCAATTTGAGTGTCTGAGCTTCATATCT +
Preference number: 2 (lower is better)
Translates to: LAPSPVLFSCPMLTV*VHVLIQFECLSFIS
Trigger: AGATATGAAGCTCAGACACTCAAATTGAATTAGAACGTGAACCAAAACGGTTAGCATGGGGCAGGAGAAGAGCACTGGGCTAGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp CCACATTTAACTTCAACACCCATAGATTCCGATGAAGACACATGTTaGCCTTGGGATGGAAGCATGAGGGTGAAGAATGGGGTGATGGGT +
Preference number: 2 (lower is better)
Translates to: PHLTSTPIDSDEDTC*PWDGSMRVKNGVMG
Trigger: ACCCATCACCCCATTCTTCACCCTCATGCTTCCATCCCAAGGCAAACATGTGTCTTCATCGGAATCTATGGGTGTTGAAGTTAAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp AGGTGGCTAGTGAGGCTACCCAGCTTGCTGTGGACACTGTATGCTTaGTCTTATATTCTCTCACAACGGTACATCATCTGCCATTCTTTG +
Preference number: 2 (lower is better)
Translates to: RWLVRLPSLLWTLYA*SYILSQRYIICHSL
Trigger: CAAAGAATGGCAGATGATGTACCGTTGTGAGAGAATATAAGACAAAGCATACAGTGTCCACAGCAAGCTGGGTAGCCTCACTAGCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR TCA 90 bp AAGGCTTATTGGATTCAACATAATTTCTCTGAAACACGTGTCCGGCTTGTGGCACCCAGCCTACCAAGGTaGCATCAAAACAAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: KAYWIQHNFSETRVRLVAPSLPR*HQNKEA
Trigger: AGCCTCCTTGTTTTGATGTCACCTTGGTAGGCTGGG...TGCCACAAGCCGGACACGTGTTTCAGAGAAATTATGTTGAATCCAATAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558306.1
3UTR-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTAAGGTGGCAGCAATCTaGCAACTGCGGTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSKVAAI*QLRSPS
Trigger: TGAAGGAGACCGCAGTTGTCAGATTGCTGCCACCTT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGGAGTAATTTGTGCATaGTCTGCTGAATGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTGVICA*SAEWRK
Trigger: CTTCCTCCATTCAGCAGATCATGCACAAATTACTCC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGCCCCAGAAGCTGGCTaGCAGCTCTCCCGTTGGTGT +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAAPEAG*QLSRWC
Trigger: ACACCAACGGGAGAGCTGTCAGCCAGCTTCTGGGGC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCTTCTACTTCTGAGTTaGGTCTCGTGCAGCCCCAGA +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTLLLLS*VSCSPR
Trigger: TCTGGGGCTGCACGAGACTCAACTCAGAAGTAGAAG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTAAGTGGCTAGGCCAGTaGCCTCCTGTGAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSKWLGQ*PPVKSI
Trigger: TATGCTCTTCACAGGAGGTCACTGGCCTAGCCACTT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCTTCCTGAATGTTTCTaGGGCCAGTTCATCTCCAGA +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTLPECF*GQFISR
Trigger: TCTGGAGATGAACTGGCCTCAGAAACATTCAGGAAG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATCTGATCTTGAACTCCTaGCCTCGTGATCCATCCACC +
Preference number: 2 (lower is better)
Translates to: MITHFSKDETIGCHDPGNLILNS*PRDPST
Trigger: GGTGGATGGATCACGAGGTCAGGAGTTCAAGATCAG...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp CTATACACTGAACACTCCTATAAGTCTCTGTGGAAACACAACGCCCCATTGTCAGGCACTGGTGGCTCATaGAGTTTCTACTTAGCATCC +
Preference number: 2 (lower is better)
Translates to: LYTEHSYKSLWKHNAPLSGTGGS*SFYLAS
Trigger: GGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCC...TGACAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGAGTGTTCAGTGTATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR GCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAGCAACCAAGTCTCTTaGTATTGCAACCCTAAAGCG +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTSNQVS*YCNPKA
Trigger: CGCTTTAGGGTTGCAATAGCAAGAGACTTGGTTGCT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGGCCCACATTTCAGCTaGCTTCAGCTAACCAGGACG +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFGPHFS*LQLTRT
Trigger: CGTCCTGGTTAGCTGAAGGCAGCTGAAATGTGGGCC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGCAGTGGGGTTTACCTaGGACTCAGTAGAGACCCAG +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFAVGFT*DSVETQ
Trigger: CTGGGTCTCTACTGAGTCCCAGGTAAACCCCACTGC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAAGCAGAGGAGATCTGTaGGGCCAGGCTGTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKSRGDL*GQAVGF
Trigger: GAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAAGTCTTCTAGCAGGTTaGCTCCCTACCAAAGCAGAC +
Preference number: 2 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISSLLAG*LPTKAD
Trigger: GTCTGCTTTGGTAGGGAGCCAACCTGCTAGAAGACT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTATTTTCCCTGCAGTGCTaGTGGCGTCTATACCAACCC +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILFSLQC*WRLYQP
Trigger: GGGTTGGTATAGACGCCACCAGCACTGCAGGGAAAA...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCTGAGCCAGGAGAGCTaGGAGTGTTACTCCAAACCC +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFLSQES*ECYSKP
Trigger: GGGTTTGGAGTAACACTCCCAGCTCTCCTGGCTCAG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp CTGCTGGCAGGTGGGTTCATTCAACAAACATCCCTAGACATTTCCTaGCTCCAGATTCCGAGCAAAGCACTAAAAAGACCCTTAATCTCA +
Preference number: 2 (lower is better)
Translates to: LLAGGFIQQTSLDIS*LQIPSKALKRPLIS
Trigger: TGAGATTAAGGGTCTTTTTAGTGCTTTGCTCGGAATCTGGAGCAAGGAAATGTCTAGGGATGTTTGTTGAATGAACCCACCTGCCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp ACATTTCTCCGTGGGAATCCCACTCACACGTATTTTTGTTGGCACTaGGGCCTATTAAAGGTGTGGTCTAGCATTTGCTCTTCACTCATC +
Preference number: 2 (lower is better)
Translates to: TFLRGNPTHTYFCWH*GLLKVWSSICSSLI
Trigger: GATGAGTGAAGAGCAAATGCTAGACCACACCTTTAATAGGCCCAAGTGCCAACAAAAATACGTGTGAGTGGGATTCCCACGGAGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGAGGCAACAGAGTATaGATTCATGACCACCAGCCA +
Preference number: 2 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGGNRV*IHDHQP
Trigger: TGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
3UTR-3UTR TCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCATGAAGTATCTTGACTaGTCTGTTTTAACGTCTGAG +
Preference number: 2 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAMKYLD*SVLTSE
Trigger: CTCAGACGTTAAAACAGATCAGTCAAGATACTTCAT...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp AGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAGTTGAAAATGGGGAGTGTATTTAAAAGATaGTCCTGGTGCACAGGTTTT +
Preference number: 2 (lower is better)
Translates to: RRESHPLPSPQWIKLKMGSVFKR*SWCTGF
Trigger: AAAACCTGTGCACCAGGAGCATCTTTTAAATACACT...CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGTGTGTCCCAGTACATaGCACACTCCCCAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKVCPST*HTPQSH
Trigger: ATGGCTCTGGGGAGTGTGGCATGTACTGGGACACAC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTAGCTTACACCCAGGATaGATGCTGTCAGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSSLHPG*MLSALV
Trigger: GACAAGAGCTGACAGCATCCATCCTGGGTGTAAGCT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGCAGGTGGCAGTGTCTTaGCAGGGTTCAGGTTTCAGC +
Preference number: 2 (lower is better)
Translates to: SMALFCRKVAISALRFYVQVAVS*QGSGFS
Trigger: GCTGAAACCTGAACCCTGCCAAGACACTGCCACCTG...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACCCAAATCCCAACCATaGCTACAATCTGAGCACAGC +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILPKSQP*LQSEHS
Trigger: GCTGTGCTCAGATTGTAGCCATGGTTGGGATTTGGG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATGGTCTTCTAAAAGGTaGACTTTGGTATGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: LVGFDPELISSGLHERWAWSSKR*TLVWEN
Trigger: ATTTTCCCATACCAAAGTCCACCTTTTAGAAGACCA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGCAGAGAGACCAGCCTaGGTGCCCTGGAGCGTTCAT +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAAERPA*VPWSVH
Trigger: ATGAACGCTCCAGGGCACCCAGGCTGGTCTCTCTGC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATACATATATATCAGGTaGGACCAGAACCTAGCTTTA +
Preference number: 2 (lower is better)
Translates to: LVGFDPELISSGLHERWAYIYIR*DQNLAL
Trigger: TAAAGCTAGGTTCTGGTCCCACCTGATATATATGTA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTAGCTCTCTGGACTGCTaGCAGGTGGGTTCATTCAAC +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFSSLDC*QVGSFN
Trigger: GTTGAATGAACCCACCTGCCAGCAGTCCAGAGAGCT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCGGCTCCTCTGCTCCTaGAGGCTAAAAGTTTATGGA +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTRLLCS*RLKVYG
Trigger: TCCATAAACTTTTAGCCTCCAGGAGCAGAGGAGCCG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGAGGCACTAATCACTTaGTCCAGGGGGCTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFEALIT*SRGLER
Trigger: TCTTTCCAGCCCCCTGGACCAAGTGATTAGTGCCTC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAAGATTGCCTCCGTATaGTTTTTACCTTTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTKIASV*FLPFSA
Trigger: GGCTGAAAAAGGTAAAAATCATACGGAGGCAATCTT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTGAAAGACACATCCTTTaGAACTCCAGCAAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTERHIL*NSSKKL
Trigger: AAGCTTCTTGCTGGAGTTGCAAAGGATGTGTCTTTC...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTACCCACTCCACTGCTTaGTTTCCTGAAACACTCACT +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSTHSTA*FPETLT
Trigger: AGTGAGTGTTTCAGGAAAGCAAGCAGTGGAGTGGGT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGACATTATCTCCTACTaGAAATGTCAAACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTDIISY*KCQTGS
Trigger: AGACCCAGTTTGACATTTGCAGTAGGAGATAATGTC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGCACTGGCCGCTCATTaGACATCTCCCAGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAALAAH*TSPREA
Trigger: GGCTTCTCTGGGAGATGTCCAATGAGCGGCCAGTGC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCTGGAGTGGCCATATTaGCTAATAGGATGTCATTTC +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTLEWPY*LIGCHF
Trigger: GAAATGACATCCTATTAGCCAATATGGCCACTCCAG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGCAATCACTGTACTTTaGAGTCAAGGTAATACTGCT +
Preference number: 2 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTAITVL*SQGNTA
Trigger: AGCAGTATTACCTTGACTCCAAAGTACAGTGATTGC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTGATAGCCAAGCTCACTaGTTCAAGACATTATCTCCT +
Preference number: 2 (lower is better)
Translates to: CLGDGCAKISQITTKELTDSQAH*FKTLSP
Trigger: AGGAGATAATGTCTTGAACCAGTGAGCTTGGCTATC...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp AGAAAGTCCAGTTCTTTAAGTTCTGAGAATAGAAAGACACATCCTTaGCAACTCCAGCAAGAAGCTTACACCCAGGATGGATGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: RKSSSLSSENRKTHP*QLQQEAYTQDGCCQ
Trigger: CTGACAGCATCCATCCTGGGTGTAAGCTTCTTGCTGGAGTTGCAAAGGATGTGTCTTTCTATTCTCAGAACTTAAAGAACTGGACTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACACGTAGGTGCCATCATTaGTTCCCAAAAGCATCAAGA +
Preference number: 2 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTRRCHH*FPKASR
Trigger: TCTTGATGCTTTTGGGAATCAATGATGGCACCTACG...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAAGAAAAATGGCACAGTaGCACAACGTTGTCAGAATC +
Preference number: 2 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISRKMAQ*HNVVRI
Trigger: GATTCTGACAACGTTGTGTCACTGTGCCATTTTTCT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTATGTGGAATTATAGAGTaGGTCTGGCTCATTCTGGAG +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILCGIIE*VWLILE
Trigger: CTCCAGAATGAGCCAGACTCACTCTATAATTCCACA...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGAGGAGAATGAGTCATaGAGAGCTTCTGTCAGAAGC +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFEENES*RASVRS
Trigger: GCTTCTGACAGAAGCTCTGCATGACTCATTCTCCTC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTTTCCCATGTACAAATaGTGGTCCTGGCATGAACAG +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTFPMYK*WSWHEQ
Trigger: CTGTTCATGCCAGGACCAGCATTTGTACATGGGAAA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGTCTGGCCTGAAGAATaGCACAAGGAGTCATTTGCA +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFVWPEE*HKESFA
Trigger: TGCAAATGACTCCTTGTGGCATTCTTCAGGCCAGAC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCCTTCTAGAGATGCCTaGTCTGCATCTCTAGTCTCA +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFPSRDA*SASLVS
Trigger: TGAGACTAGAGATGCAGAGCAGGCATCTCTAGAAGG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGAAGATAACTGTTGAGTaGATGTCTGGGCATGGGTGT +
Preference number: 2 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLKITVE*MSGHGC
Trigger: ACACCCATGCCCAGACATGCACTCAACAGTTATCTT...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACCTCTGTGTCTCAGGTTaGACTCATACTTCCCCTTGC +
Preference number: 2 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNLCVSG*THTSPC
Trigger: GCAAGGGGAAGTATGAGTGCAACCTGAGACACAGAG...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTGCCCTCACTCAGTTTaGAGAAGTTATCTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLCPHSV*RSYLCV
Trigger: GACACAGAGATAACTTCTGCAAACTGAGTGAGGGCA...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATCTGGCTTGTCTGCCTaGCTCCCTGTACAATATTCC +
Preference number: 2 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKSGLSA*LPVQYS
Trigger: GGAATATTGTACAGGGAGCCAGGCAGACAAGCCAGA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTTCCGGGAAGGCTTATTaGATTCAACATAATTTCTCT +
Preference number: 2 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPSGKAY*IQHNFS
Trigger: AGAGAAATTATGTTGAATCCAATAAGCCTTCCCGGA...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558306.1
3UTR CAA 90 bp TATGCTGTGAAACTGTCATCAGCAGAGTGTTTTTCATGCCTTAATTaGCAGTTCCCTCAGGGGAAACCCAATACAATGACAATCTCTGTC +
Preference number: 2 (lower is better)
Translates to: YAVKLSSAECFSCLN*QFPQGKPNTMTISV
Trigger: GACAGAGATTGTCATTGTATTGGGTTTCCCCTGAGGGAACTGCAAATTAAGGCATGAAAAACACTCTGCTGATGACAGTTTCACAGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp AGTCTTCATACAAATAATCTAGAGAATCTTGTGCCATGGCCTTTTTaGCAGGGCAAGTGTGAGCACTGGAATGAGATTCACTCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: SLHTNNLENLVPWPF*QGKCEHWNEIHSRG
Trigger: TCCTCTTGAGTGAATCTCATTCCAGTGCTCACACTTGCCCTGCAAAAAAGGCCATGGCACAAGATTCTCTAGATTATTTGTATGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp GCCTCTGGTCCACTATGCTCAGGTCAACAGGACAATCATATCTATTaGACTCACGGTATGATCACTCATTTCTCCAAAGATGAGACAATT +
Preference number: 2 (lower is better)
Translates to: ASGPLCSGQQDNHIY*THGMITHFSKDETI
Trigger: AATTGTCTCATCTTTGGAGAAATGAGTGATCATACCGTGAGTCAAATAGATATGATTGTCCTGTTGACCTGAGCATAGTGGACCAGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTAAGGAATCTTTGCAATaGTGGAAAAGACAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTKESLQ*WKRQVA
Trigger: TGCCACCTGTCTTTTCCATCATTGCAAAGATTCCTT...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAACCATGGCTACAATCTaGGCACAGCTCTTTACTATT +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILTMATI*AQLFTI
Trigger: AATAGTAAAGAGCTGTGCTCAGATTGTAGCCATGGT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTGTGGGTCACGACACTaGACAAAAAGCAATATTTGC +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTCGSRH*TKSNIC
Trigger: GCAAATATTGCTTTTTGTTCAGTGTCGTGACCCACA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCAGATACACTGCAAGTaGTTGTTGCTTGGAGATCTA +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTQIHCK*LLLGDL
Trigger: TAGATCTCCAAGCAACAATCACTTGCAGTGTATCTG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTACCCAGTTCTTCTCCTaGTTCTTCCCAGCCCATCAG +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPATQFFS*FFPAHQ
Trigger: CTGATGGGCTGGGAAGAAGCAGGAGAAGAACTGGGT...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTAGCCATAGTGTACCCTaGAATTTCCATGGCCCTATT +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFSHSVP*NFHGPI
Trigger: AATAGGGCCATGGAAATTGCAGGGTACACTATGGCT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTACTATGGTCAGCAGTaGCTTTCAGAAAGAGCAATC +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTYYGQQ*LSERAI
Trigger: GATTGCTCTTTCTGAAAGGCACTGCTGACCATAGTA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGAACAGGTATGTCAAGATaGAAGAGAGGCCAAAAGATA +
Preference number: 2 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRTGMSR*KRGQKI
Trigger: TATCTTTTGGCCTCTCTTGCATCTTGACATACCTGT...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGGCAACAGATAACATaGTTCCTTTCCTCATCTGTT +
Preference number: 2 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRWQQIT*FLSSSV
Trigger: AACAGATGAGGAAAGGAAGCATGTTATCTGTTGCCA...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGTTCAAGAAATTCTCCTaGTTCAACCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTEFKKFS*FNLPSS
Trigger: GCTACTCGGGAGGTTGAAGCAGGAGAATTTCTTGAA...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTGTTGTTAAAGTCTTGTaGTTTTCTGTATCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVVVKVL*FSVSAA
Trigger: AGCTGCTGATACAGAAAACCACAAGACTTTAACAAC...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAAATACTGCTGCTGTTTaGTTTGGAAAAGGGGAACAA +
Preference number: 2 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISNTAAV*FGKGEQ
Trigger: TTGTTCCCCTTTTCCAAACCAAACAGCAGCAGTATT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATGGCAATGCATTCATATaGAAGAGATGCCAGAGAGAT +
Preference number: 2 (lower is better)
Translates to: MITHFSKDETIGCHDPGNGNAFI*KRCQRD
Trigger: ATCTCTCTGGCATCTCTTCCATATGAATGCATTGCC...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR TCA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGCATCAGGCTTTCTTGTaGTGGTTAGGTTGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: ADSIGFQKFSESRISGSRHQAFL*WLGCFC
Trigger: ACAAAAACAACCTAACCATCACAAGAAAGCCTGATG...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGCACTTGAGTTTATATaGAGATGTTCGCTTCAGTCA +
Preference number: 2 (lower is better)
Translates to: LCHELQHGPLNSSPFLILALEFI*RCSLQS
Trigger: TGACTGAAGCGAACATCTTCATATAAACTCAAGTGC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTGTGTAGCAGGCACTTaGGTTTATATGAAGATGTTC +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSCVAGT*VYMKMF
Trigger: GAACATCTTCATATAAACTCAAGTGCCTGCTACACA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAAGGAGCACAGCACAGTaGGAAAACCAACACCAAATT +
Preference number: 2 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKRSTAQ*ENQHQI
Trigger: AATTTGGTGTTGGTTTTCTCACTGTGCTGTGCTCCT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTGTAAGATACTAAACTaGAAAGCAAGACCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTCKILN*KARPEC
Trigger: GCACTCAGGTCTTGCTTTTCAGTTTAGTATCTTACA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACATACACCGTAAGTATTTaGGCTCTCAATCTACCTTTG +
Preference number: 2 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTYTVSI*ALNLPL
Trigger: CAAAGGTAGATTGAGAGCTCAAATACTTACGGTGTA...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTATGCCCATCAATCAATaGGCAGATAAAGAAACTGTG +
Preference number: 2 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSMPINQ*ADKETV
Trigger: CACAGTTTCTTTATCTGCTCATTGATTGATGGGCAT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTAGAAGGGGCAGATGGTaGGAAAGCATTGAAATAAGT +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFRRGRW*ESIEIS
Trigger: ACTTATTTCAATGCTTTCTCACCATCTGCCCCTTCT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACGAATATGACATCCCTTaGCCTCCAAAACATTGTCCC +
Preference number: 2 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNEYDIP*PPKHCP
Trigger: GGGACAATGTTTTGGAGGTCAAGGGATGTCATATTC...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGATCAAAGCCAGATTGTaGAGCTTCAGCCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: SMALFCRKVAISALRFYVIKARL*SFSQNS
Trigger: TGAGTTCTGGCTGAAGCTGCACAATCTGGCTTTGAT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCAAGCTTGGTTGATGTaGAGGCTAGGAAAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAQAWLM*RLGKRE
Trigger: CTCCCTCTTTCCTAGCCTGCACATCAACCAAGCTTG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCAGGAAATAGAAATGTaGAAGTTCTCTGCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTQEIEM*KFSASY
Trigger: ATAGGAGGCAGAGAACTTGCACATTTCTATTTCCTG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGTCGGTCTATGACTACTaGCACATCATGTCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTESVYDY*HIMSPF
Trigger: AAAAGGAGACATGATGTGGCAGTAGTCATAGACCGA...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAAAGCAACAGGAGCATTaGTGCTTCACTTCTAACCAG +
Preference number: 2 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKKQQEH*CFTSNQ
Trigger: CTGGTTAGAAGTGAAGCACCAATGCTCCTGTTGCTT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTAGAGGAGTGTCTTATTaGAACTCAGCCTTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPARGVSY*NSALPR
Trigger: CCTGGGCAAGGCTGAGTTCCAATAAGACACTCCTCT...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATCTGTTCCAGCCCATTTaGATAATGCTCAGCAATATA +
Preference number: 2 (lower is better)
Translates to: MITHFSKDETIGCHDPGNLFQPI*IMLSNI
Trigger: TATATTGCTGAGCATTATCCAAATGGGCTGGAACAG...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGTCCTCTCTCCAAAGTTaGCAACAGATAACATGCTTC +
Preference number: 2 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTESSLQS*QQITCF
Trigger: GAAGCATGTTATCTGTTGCCAACTTTGGAGAGAGGA...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR TCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCTCTCAGAGGCGATGTaGCATGGTCTTCTAAAAGGT +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPALSEAM*HGLLKG
Trigger: ACCTTTTAGAAGACCATGTCACATCGCCTCTGAGAG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACATCCAACTTTACAAGATaGCAGATTTCCCATCGTAAT +
Preference number: 2 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTSNFTR*QISHRN
Trigger: ATTACGATGGGAAATCTGTCATCTTGTAAAGTTGGA...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGGCAACCAGGAAGAATaGTTTTCAGATGCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKGNQEE*FSDAQN
Trigger: ATTCTGAGCATCTGAAAATCATTCTTCCTGGTTGCC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGTGGGAGCTAAGCTGTaGGGATGTCAAGGTATAAGA +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAVGAKL*GCQGIR
Trigger: TCTTATACCTTGACATCCTCACAGCTTAGCTCCCAC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGAGGCATCAGTTACATaGCAGGTAGCTATTAAATTG +
Preference number: 2 (lower is better)
Translates to: HCSAVAISQLTLQIANIFEASVT*QVAIKL
Trigger: CAATTTAATAGCTACCTGGCATGTAACTGATGCCTC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGTTTTCTGCTTTGTGTaGCGAATCATTCGGTCCAAT +
Preference number: 2 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKVFCFV*RIIRSN
Trigger: ATTGGACCGAATGATTCGGCACACAAAGCAGAAAAC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGAGTCTGGCTCATTCTaGAGCCAACCACTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAESGSF*SQPLLK
Trigger: TTTAAGGAGTGGTTGGCTCCAGAATGAGCCAGACTC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp TACCTGAGAAATAACATGAATCTTCCCCCAACAGTACACAAATCTTaGCCAGAGAGAAGAACACTGCTATTTTCTTTCACATTCAGAGTG +
Preference number: 2 (lower is better)
Translates to: YLRNNMNLPPTVHKS*PERRTLLFSFTFRV
Trigger: CACTCTGAATGTGAAAGAAAATAGCAGTGTTCTTCTCTCTGGCAAAGATTTGTGTACTGTTGGGGGAAGATTCATGTTATTTCTCAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATCTATTCTAGTACACTaGCACTTGAACCAAAGACAG +
Preference number: 2 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKSILVH*HLNQRQ
Trigger: CTGTCTTTGGTTCAAGTGTCAGTGTACTAGAATAGA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR TCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAGAAGGAGTGGGCAATTaGGAACATAATAAACAGGTA +
Preference number: 2 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKEGVGN*EHNKQV
Trigger: TACCTGTTTATTATGTTCTCAATTGCCCACTCCTTC...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACTTCATATGGAAGAGATaGCAGAGAGATCTGTTAACC +
Preference number: 2 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNFIWKR*QRDLLT
Trigger: GGTTAACAGATCTCTCTGGCATCTCTTCCATATGAA...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 90 bp CTGTACAATATTCCTCAAATCTACCAGTCACCAGGCCTTCTTTCATaGTCTTCTATAATCAATCCTTTGCCATTGGTAACTTTTCTTCGT +
Preference number: 2 (lower is better)
Translates to: LYNIPQIYQSPGLLS*SSIINPLPLVTFLR
Trigger: ACGAAGAAAAGTTACCAATGGCAAAGGATTGATTATAGAAGACAATGAAAGAAGGCCTGGTGACTGGTAGATTTGAGGAATATTGTACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 90 bp GCTTTGTCTTATATTCTCTCACAACGGTACATCATCTGCCATTCTTaGGTTGCACAACAAACAAGTCATTTTCTAACAACCAAGGTCATT +
Preference number: 2 (lower is better)
Translates to: ALSYILSQRYIICHS*VAQQTSHFLTTKVI
Trigger: AATGACCTTGGTTGTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGTTGTGAGAGAATATAAGACAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTACCATAGGAAAGACCTaGACAAAAGACAAACACCTT +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPATIGKT*TKDKHL
Trigger: AAGGTGTTTGTCTTTTGTGCAGGTCTTTCCTATGGT...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCAGATAAAGAAACTGTaGTACACACACACACACACA +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAQIKKL*YTHTHT
Trigger: TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCACAAATGGGGCATATaGATTTGTATACCAGTAGGA +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAHKWGI*ICIPVG
Trigger: TCCTACTGGTATACAAATCCATATGCCCCATTTGTG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTACCAAGCCAGAAGGATaGTTTGACTTCAAAAAGACA +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPATKPEG*FDFKKT
Trigger: TGTCTTTTTGAAGTCAAACCATCCTTCTGGCTTGGT...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGTATTAAGACTTTCGTaGAGTTTGAGAAGCTGGATT +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAVLRLS*SLRSWI
Trigger: AATCCAGCTTCTCAAACTCCACGAAAGTCTTAATAC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTTGCAGTAAAATTCACTaGACAGAGGTTAATCTAGAT +
Preference number: 2 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPACSKIH*TEVNLD
Trigger: ATCTAGATTAACCTCTGTGCAGTGAATTTTACTGCA...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp GTGGCAGCAGCCAGGAAGGCAGTGATTCCCCAGTGCTaGGGCAGAGGGAGCAGGCCCCAGCACAGATGTTTC +
Preference number: 3 (lower is better)
Translates to: VAAARKAVIPQC*GRGSRPQHRCF
Trigger: GAAACATCTGTGCTGGGGCCTGCTCCCTCTGCCCCAGCACTGGGGAATCACTGCCTTCCTGGCTGCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp GAGCCAGGGAGACCCCACGCTTCCAAGCAGGGAAAGTaGGGCTGGAGCACGGCTGGACTTCATCAGGCTTTC +
Preference number: 3 (lower is better)
Translates to: EPGRPHASKQGK*GWSTAGLHQAF
Trigger: GAAAGCCTGATGAAGTCCAGCCGTGCTCCAGCCTCACTTTCCCTGCTTGGAAGCGTGGGGTCTCCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 72 bp CCGGGATCATGGGCTGGCAGGAAGGGCCTTTGTCCCTaGTTCCCTTGGTCCCTTGTGGTCCTAGTAGGATGG +
Preference number: 3 (lower is better)
Translates to: PGSWAGRKGLCP*FPWSLVVLVGW
Trigger: CCATCCTACTAGGACCACAAGGGACCAAGGGAATCAGGGACAAAGGCCCTTCCTGCCAGCCCATGATCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR GCA 72 bp CCGGTCAGGGCTCAGGCCTCATTAAGATTCCAAGCCTaGAGCACTGGCCGCTCATTGGACATCTCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: PVRAQASLRFQA*STGRSLDISQR
Trigger: TCTCTGGGAGATGTCCAATGAGCGGCCAGTGCTGCAGGCTTGGAATCTTAATGAGGCCTGAGCCCTGACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp CAGCTCAAAGGCAGATGCATCAATCCTCCCAGGGGCTaGAAACGTGAGGAGAATGCCAAGGGGCCTGGCACA +
Preference number: 3 (lower is better)
Translates to: QLKGRCINPPRG*KREENAKGPGT
Trigger: TGTGCCAGGCCCCTTGGCATTCTCCTCACGTTTCCAGCCCCTGGGAGGATTGATGCATCTGCCTTTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGCCATGGTTAAGAGGCTaGGAATGTCCGGGAAGGCTT +
Preference number: 3 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRPWLRG*ECPGRL
Trigger: AAGCCTTCCCGGACATTCCAAGCCTCTTAACCATGG...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558306.1
3UTR TCA 72 bp CCCCATGGAGGCATTTGCAGAATCGGGCTGGGATCCTaGCACGAAGAACCACCATCCACAGGACCCAAGAAG +
Preference number: 3 (lower is better)
Translates to: PHGGICRIGLGS*HEEPPSTGPKK
Trigger: CTTCTTGGGTCCTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 72 bp ACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTaGCATGGAGCAATGGGGAGCAGGATGAGGAGAGCT +
Preference number: 3 (lower is better)
Translates to: TQSISRAQWGTA*HGAMGSRMRRA
Trigger: AGCTCTCCTCATCCTGCTCCCCATTGCTCCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 72 bp AGCGTGAAAGCCCGTGGGCCTAAGGTGGCAGCAATCTaGCAACTGCGGTCTCCTTCAGTGCTTCTTGTTCCC +
Preference number: 3 (lower is better)
Translates to: SVKARGPKVAAI*QLRSPSVLLVP
Trigger: GGGAACAAGAAGCACTGAAGGAGACCGCAGTTGTCAGATTGCTGCCACCTTAGGCCCACGGGCTTTCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp TCTCCCGGCATGGCTGACTCACTTCTACTTCTGAGTTaGGTCTCGTGCAGCCCCAGAAGCTGGCTGACAGCT +
Preference number: 3 (lower is better)
Translates to: SPGMADSLLLLS*VSCSPRSWLTA
Trigger: AGCTGTCAGCCAGCTTCTGGGGCTGCACGAGACTCAACTCAGAAGTAGAAGTGAGTCAGCCATGCCGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp AAGCCCGTGGGCCTAAGGTGGCAGCAATCTGACAACTaGGGTCTCCTTCAGTGCTTCTTGTTCCCCCAAGGA +
Preference number: 3 (lower is better)
Translates to: KPVGLRWQQSDN*GLLQCFLFPQG
Trigger: TCCTTGGGGGAACAAGAAGCACTGAAGGAGACCGCAGTTGTCAGATTGCTGCCACCTTAGGCCCACGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp GGCTCAGGCCTCATTAAGATTCCAAGCCTGCAGCACTaGCCGCTCATTGGACATCTCCCAGAGAAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: GSGLIKIPSLQH*PLIGHLPEKPQ
Trigger: CTGAGGCTTCTCTGGGAGATGTCCAATGAGCGGCCAGTGCTGCAGGCTTGGAATCTTAATGAGGCCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp ACTTCATACAATGGAGGCCCCATGGGCCAGTGGAGCTaGGAGCCAGAAGTCTACTCCACCAATGAGTCAGCA +
Preference number: 3 (lower is better)
Translates to: TSYNGGPMGQWS*EPEVYSTNESA
Trigger: TGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCCACTGGCCCATGGGGCCTCCATTGTATGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR CCA 72 bp ATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTaGAGCTGGGAGCCAGAAGTCTACTCCACCAATGAG +
Preference number: 3 (lower is better)
Translates to: MLTSYNGGPMGQ*SWEPEVYSTNE
Trigger: CTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR CCA 72 bp CCTACCAAAGCAGACAATAGACATCTCAGGGGCCTTTaGGACAGCTCTCTGGACTGCTGGCAGGTGGGTTCA +
Preference number: 3 (lower is better)
Translates to: PTKADNRHLRGL*DSSLDCWQVGS
Trigger: TGAACCCACCTGCCAGCAGTCCAGAGAGCTGTCCCAAAGGCCCCTGAGATGTCTATTGTCTGCTTTGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp CCAGTGGAGCTGGGAGCCAGAAGTCTACTCCACCAATaGGTCAGCAAATACGGGAGAGTTTCAGGCCCTACA +
Preference number: 3 (lower is better)
Translates to: PVELGARSLLHQ*VSKYGRVSGPT
Trigger: TGTAGGGCCTGAAACTCTCCCGTATTTGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR GCA 72 bp GGTGGTGTTAAAGGGTGCCGGGGCACTGGTGGCTCATaGAGTTTCTACTTAGCATCCCTGGATCCAAAGAGA +
Preference number: 3 (lower is better)
Translates to: GGVKGCRGTGGS*SFYLASLDPKR
Trigger: TCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCTTTAACACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
3UTR GCA 72 bp CCCTCTCCTAGGGTCAGATCTCAGCCACGGCTCCTCTaGTCCTGGAGGCTAAAAGTTTATGGACAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: PSPRVRSQPRLL*SWRLKVYGQRK
Trigger: CTTTCTCTGTCCATAAACTTTTAGCCTCCAGGAGCAGAGGAGCCGTGGCTGAGATCTGACCCTAGGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp CGCTTCCAAGCAGGGAAAGTGAGGCTGGAGCACGGCTaGACTTCATCAGGCTTTCTTGTGATGGTTAGGTTG +
Preference number: 3 (lower is better)
Translates to: RFQAGKVRLEHG*TSSGFLVMVRL
Trigger: CAACCTAACCATCACAAGAAAGCCTGATGAAGTCCAGCCGTGCTCCAGCCTCACTTTCCCTGCTTGGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CAA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGGAAATGCTGATTCCATaGGGTTCCAAAAGTTCTCAG +
Preference number: 3 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWEMLIP*GSKSSQ
Trigger: CTGAGAACTTTTGGAACCCAATGGAATCAGCATTTC...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATGTGGGGCCAGGCTGTaGGCTTCCATGTTTCATGTG +
Preference number: 3 (lower is better)
Translates to: LVGFDPELISSGLHERWACGARL*ASMFHV
Trigger: CACATGAAACATGGAAGCCAACAGCCTGGCCCCACA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTCTGACAGCTCTCCCGTaGGTGTTGGTTTCTGCAGTA +
Preference number: 3 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVLTALP*VLVSAV
Trigger: TACTGCAGAAACCAACACCAACGGGAGAGCTGTCAG...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCGTGAGGCTACCCAGCTaGCTGTGGACACTGTATGCT +
Preference number: 3 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAVRLPS*LWTLYA
Trigger: AGCATACAGTGTCCACAGCAAGCTGGGTAGCCTCAC...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 72 bp AATGGACACAGTAAGAACATGACCCCAAGATCAGCGTaGAAGCCCGTGGGCCTAAGGTGGCAGCAATCTGAC +
Preference number: 3 (lower is better)
Translates to: NGHSKNMTPRSA*KPVGLRWQQSD
Trigger: GTCAGATTGCTGCCACCTTAGGCCCACGGGCTTTCACGCTGATCTTGGGGTCATGTTCTTACTGTGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp CACCTGTTCTTAGCTACCCAGATCAAAGCCAGATTGTaGAGCTTCAGCCAGAACTCACAGCCCCGGCATAAC +
Preference number: 3 (lower is better)
Translates to: HLFLATQIKARL*SFSQNSQPRHN
Trigger: GTTATGCCGGGGCTGTGAGTTCTGGCTGAAGCTGCACAATCTGGCTTTGATCTGGGTAGCTAAGAACAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTaGCACATCATGTCTCCTTTTCCATACCTGGGAATA +
Preference number: 3 (lower is better)
Translates to: LAGLPWPSVYDY*HIMSPFPYLGI
Trigger: TATTCCCAGGTATGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 72 bp CCTAGGGTCAGATCTCAGCCACGGCTCCTCTGCTCCTaGAGGCTAAAAGTTTATGGACAGAGAAAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: PRVRSQPRLLCS*RLKVYGQRKQS
Trigger: ACTCTGCTTTCTCTGTCCATAAACTTTTAGCCTCCAGGAGCAGAGGAGCCGTGGCTGAGATCTGACCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAAGGACCAAAGATCCTTaGCCTCAAGTGGGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: LVGFDPELISSGLHERWARTKDP*PQVGSL
Trigger: GAGGCTTCCCACTTGAGGCAAAGGATCTTTGGTCCT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTCTAAGGCAAATGCCCTaGAGTCTTCTAGCAGGTTGG +
Preference number: 3 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVLRQMP*SLLAGW
Trigger: CCAACCTGCTAGAAGACTCAAGGGCATTTGCCTTAG...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCACCAAAGATGAGACAATaGGCTGCCATGATCCTGGCA +
Preference number: 3 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPPKMRQ*AAMILA
Trigger: TGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGG...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCACTCTCATCCCAAAGATaGTCTCTCTGCATGGTCCAG +
Preference number: 3 (lower is better)
Translates to: LVGFDPELISSGLHERWALSSQR*SLCMVQ
Trigger: CTGGACCATGCAGAGAGACAATCTTTGGGATGAGAG...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATCAGGCATCATTTCTTaGCTGAGCACAGCCATGCAG +
Preference number: 3 (lower is better)
Translates to: LVGFDPELISSGLHERWASGIIS*LSTAMQ
Trigger: CTGCATGGCTGTGCTCAGCAAAGAAATGATGCCTGA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGACAATCTAGCAGGCTaGCTCCTAGCCCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTDNLAG*LLAQCS
Trigger: AGAGCACTGGGCTAGGAGCAAGCCTGCTAGATTGTC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp CTGAAAGTGGGAGGTGAGGCCAAGGAATCTTTGCAATaGTGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGT +
Preference number: 3 (lower is better)
Translates to: LKVGGEAKESLQ*WKRQVAVSWQG
Trigger: ACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATTCCTTGGCCTCACCTCCCACTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp CCAAGTGTTAGCATGTTGGTTTTGAACAGGGAAGGTTaGCTAGCTGAGGGGAACAGCCTGGTGAAACGCAGG +
Preference number: 3 (lower is better)
Translates to: PSVSMLVLNREG*LAEGNSLVKRR
Trigger: CCTGCGTTTCACCAGGCTGTTCCCCTCAGCTAGTCAACCTTCCCTGTTCAAAACCAACATGCTAACACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp TTTTTAAACCCCATGGAGGCATTTGCAGAATCGGGCTaGGATCCTGACACGAAGAACCACCATCCACAGGAC +
Preference number: 3 (lower is better)
Translates to: FLNPMEAFAESG*DPDTKNHHPQD
Trigger: GTCCTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGGTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR CCA 72 bp GTTCACATCCAAAGAAAGAAGAATTGGGAGGTCCCATaGCCACAACACCCTACTCCAAGGTGGACACCCAAC +
Preference number: 3 (lower is better)
Translates to: VHIQRKKNWEVP*PQHPTPRWTPN
Trigger: GTTGGGTGTCCACCTTGGAGTAGGGTGTTGTGGCCATGGGACCTCCCAATTCTTCTTTCTTTGGATGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp CCTGAGGTAAGTTTCCAAAGACGCCTGCAACCATGCTaGGCAACTCTGTGGAGTCTGAAGGTGACTGAATCT +
Preference number: 3 (lower is better)
Translates to: PEVSFQRRLQPC*ATLWSLKVTES
Trigger: AGATTCAGTCACCTTCAGACTCCACAGAGTTGCTCAGCATGGTTGCAGGCGTCTTTGGAAACTTACCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp TTGTCAGATGCCCACATTAAGCTAAGGACACTCAAGTaGCAATCTAGCAGGCTTGCTCCTAGCCCAGTGCTC +
Preference number: 3 (lower is better)
Translates to: LSDAHIKLRTLK*QSSRLAPSPVL
Trigger: GAGCACTGGGCTAGGAGCAAGCCTGCTAGATTGTCACTTGAGTGTCCTTAGCTTAATGTGGGCATCTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp CCTTCAATTCAGGGGGTTGTTTGCTGTCCCTGGTGCTaGAAACATACACCCAGGCTTCGCTGCAGAATTTAC +
Preference number: 3 (lower is better)
Translates to: PSIQGVVCCPWC*KHTPRLRCRIY
Trigger: GTAAATTCTGCAGCGAAGCCTGGGTGTATGTTTTCAGCACCAGGGACAGCAAACAACCCCCTGAATTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp TTGCAACTCCAGCAAGAAGCTTACACCCAGGATGGATaGTGTCAGCTCTTGTCATGGTTTTGTGTTGTGGGG +
Preference number: 3 (lower is better)
Translates to: LQLQQEAYTQDG*CQLLSWFCVVG
Trigger: CCCCACAACACAAAACCATGACAAGAGCTGACAGCATCCATCCTGGGTGTAAGCTTCTTGCTGGAGTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp AGGTGGCAGCAATCTGACAACTGCGGTCTCCTTCAGTaGTTCTTGTTCCCCCAAGGAATCACCTTCTTTCAT +
Preference number: 3 (lower is better)
Translates to: RWQQSDNCGLLQ*FLFPQGITFFH
Trigger: ATGAAAGAAGGTGATTCCTTGGGGGAACAAGAAGCACTGAAGGAGACCGCAGTTGTCAGATTGCTGCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTACTGGAGTGGCCATATaGGCTAATAGGATGTCATTT +
Preference number: 3 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVTGVAI*ANRMSF
Trigger: AAATGACATCCTATTAGCCAATATGGCCACTCCAGT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGAGGATCCGGTGAGGTaGGCATGGCAGAGAGACCAG +
Preference number: 3 (lower is better)
Translates to: HCSAVAISQLTLQIANIFEDPVR*AWQRDQ
Trigger: CTGGTCTCTCTGCCATGCCAACCTCACCGGATCCTC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTTGTTTACACGTCTTGTaGGGTTTTAGGGATGTTGCA +
Preference number: 3 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVCLHVL*GFRDVA
Trigger: TGCAACATCCCTAAAACCCAACAAGACGTGTAAACA...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCTGGATGAGAAACAGATaGGCTTGCCCCATCTCTGGA +
Preference number: 3 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTWMRNR*ACPISG
Trigger: TCCAGAGATGGGGCAAGCCAATCTGTTTCTCATCCA...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp TCCTCTGCAAGGAGTTTTCTAATGTCACACTCATTGTaGGCCGTTCCAGAGAGAAGAGGAAGTAGGGGGCAA +
Preference number: 3 (lower is better)
Translates to: SSARSFLMSHSL*AVPERRGSRGQ
Trigger: TTGCCCCCTACTTCCTCTTCTCTCTGGAACGGCTCACAATGAGTGTGACATTAGAAAACTCCTTGCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 72 bp ATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATaGCTACTGCCACATCATGTCTCCTTTTCCATACCT +
Preference number: 3 (lower is better)
Translates to: IFSGRSALAIGL*LLPHHVSFSIP
Trigger: AGGTATGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 72 bp GGGCCAGTTAGCACATTCTGGTCAGACATAGTTTCCTaGGACTCCAGTGAAGTCAGTAGTTATCAGCTTGGC +
Preference number: 3 (lower is better)
Translates to: GPVSTFWSDIVS*DSSEVSSYQLG
Trigger: GCCAAGCTGATAACTACTGACTTCACTGGAGTCTCAGGAAACTATGTCTGACCAGAATGTGCTAACTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 72 bp TCTCTAAGGCAAATGCCCTTGAGTCTTCTAGCAGGTTaGCTCCCTACCAAAGCAGACAATAGACATCTCAGG +
Preference number: 3 (lower is better)
Translates to: SLRQMPLSLLAG*LPTKADNRHLR
Trigger: CCTGAGATGTCTATTGTCTGCTTTGGTAGGGAGCCAACCTGCTAGAAGACTCAAGGGCATTTGCCTTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp TACAATGACAATCTCTGTCACTCTAAGCAGAAAGCCTaGCTCAGCATCATGGTCAGAGAAGGCCCAAACTCC +
Preference number: 3 (lower is better)
Translates to: YNDNLCHSKQKA*LSIMVREGPNS
Trigger: GGAGTTTGGGCCTTCTCTGACCATGATGCTGAGCCAGGCTTTCTGCTTAGAGTGACAGAGATTGTCATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTGCTCTTGTCATGGTTTaGTGTTGTGGGGTTGTCTGT +
Preference number: 3 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVALVMV*CCGVVC
Trigger: ACAGACAACCCCACAACACAAAACCATGACAAGAGC...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTAGAAAGACACATCCTTaGCAACTCCAGCAAGAAGCT +
Preference number: 3 (lower is better)
Translates to: RGPGGIRYNDLQATKSLARKTHP*QLQQEA
Trigger: AGCTTCTTGCTGGAGTTGCAAAGGATGTGTCTTTCT...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTAATGAAGTCTCTGGCTaGTCTGCCTGGCTCCCTGTA +
Preference number: 3 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSNEVSG*SAWLPV
Trigger: TACAGGGAGCCAGGCAGACAAGCCAGAGACTTCATT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTCAATTTTCTCACTGTTaGAAGTCCAAACTGTTTGTG +
Preference number: 3 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVQFSHC*KSKLFV
Trigger: CACAAACAGTTTGGACTTCAAACAGTGAGAAAATTG...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGTGCCATGGCCTTTTTaGCAGGGCAAGTGTGAGCAC +
Preference number: 3 (lower is better)
Translates to: HCSAVAISQLTLQIANIFVPWPF*QGKCEH
Trigger: GTGCTCACACTTGCCCTGCAAAAAAGGCCATGGCAC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp AGAGCTCACTTCAAAGCTAAGCTCTCAGAGGCGATGTaGCATGGTCTTCTAAAAGGTGGACTTTGGTATGGG +
Preference number: 3 (lower is better)
Translates to: RAHFKAKLSEAM*HGLLKGGLWYG
Trigger: CCCATACCAAAGTCCACCTTTTAGAAGACCATGTCACATCGCCTCTGAGAGCTTAGCTTTGAAGTGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp CAAGTGGGAAGCCTCTGTCTAGGAGTAATTTGTGCATaGTCTGCTGAATGGAGGAAGCAGCACCTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: QVGSLCLGVICA*SAEWRKQHLLF
Trigger: AAAAAGGAGGTGCTGCTTCCTCCATTCAGCAGATCATGCACAAATTACTCCTAGACAGAGGCTTCCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp GCCCCCACATTTAACTTCAACACCCATAGATTCCGATaGAGACACATGTTTGCCTTGGGATGGAAGCATGAG +
Preference number: 3 (lower is better)
Translates to: APTFNFNTHRFR*RHMFALGWKHE
Trigger: CTCATGCTTCCATCCCAAGGCAAACATGTGTCTTCATCGGAATCTATGGGTGTTGAAGTTAAATGTGGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp GAGGATATGGGAGAAGGGAAGCAACAGGAGCATTGGTaGTTCACTTCTAACCAGAAGATACTTTTCCCTCAG +
Preference number: 3 (lower is better)
Translates to: EDMGEGKQQEHW*FTSNQKILFPQ
Trigger: CTGAGGGAAAAGTATCTTCTGGTTAGAAGTGAAGCACCAATGCTCCTGTTGCTTCCCTTCTCCCATATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp AAAGAAAGACTCCTCTTTGATATTTTCTGGCAGGTCTaGCCTGGCCATCGGTCTATGACTACTGCCACATCA +
Preference number: 3 (lower is better)
Translates to: KERLLFDIFWQV*PGHRSMTTATS
Trigger: TGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAGGAGTCTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 72 bp TCCTTTGCAACTCCAGCAAGAAGCTTACACCCAGGATaGATGCTGTCAGCTCTTGTCATGGTTTTGTGTTGT +
Preference number: 3 (lower is better)
Translates to: SFATPARSLHPG*MLSALVMVLCC
Trigger: ACAACACAAAACCATGACAAGAGCTGACAGCATCCATCCTGGGTGTAAGCTTCTTGCTGGAGTTGCAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp AACATACACCCAGGCTTCGCTGCAGAATTTACACTCTaGGATGCGAGAAGCAAGAAATCCCGCTTATCAAAC +
Preference number: 3 (lower is better)
Translates to: NIHPGFAAEFTL*DARSKKSRLSN
Trigger: GTTTGATAAGCGGGATTTCTTGCTTCTCGCATCCCAGAGTGTAAATTCTGCAGCGAAGCCTGGGTGTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp TCTGCTACCCTTGTTTTCTCAGTACACCCTTCAGTCTaGCCTGAAGAATGCCACAAGGAGTCATTTGCATTC +
Preference number: 3 (lower is better)
Translates to: SATLVFSVHPSV*PEECHKESFAF
Trigger: GAATGCAAATGACTCCTTGTGGCATTCTTCAGGCCAGACTGAAGGGTGTACTGAGAAAACAAGGGTAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp ACCCTTCTGCCATATGGAGAAGACACAGCAAGCAGATaGCCATCTATAAATGAGGAAGCAGACCTTTACCAG +
Preference number: 3 (lower is better)
Translates to: TLLPYGEDTASR*PSINEEADLYQ
Trigger: CTGGTAAAGGTCTGCTTCCTCATTTATAGATGGCCATCTGCTTGCTGTGTCTTCTCCATATGGCAGAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CAA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGCCTCTGAGACCTAACTaGGTGCCAATACTTGAGCCT +
Preference number: 3 (lower is better)
Translates to: ADSIGFQKFSESRISGSRPLRPN*VPILEP
Trigger: AGGCTCAAGTATTGGCACCAAGTTAGGTCTCAGAGG...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR-3UTR CAA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTTTTTGTGTTGTGGGGTaGTCTGTTCTGTGTTTACCC +
Preference number: 3 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVFCVVG*SVLCLP
Trigger: GGGTAAACACAGAACAGACAACCCCACAACACAAAA...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGACAGGTGGCAGTGTCTaGGCAGGGTTCAGGTTTCAG +
Preference number: 3 (lower is better)
Translates to: SMALFCRKVAISALRFYVTGGSV*AGFRFQ
Trigger: CTGAAACCTGAACCCTGCCAAGACACTGCCACCTGT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCAGATCAAAGCCAGATaGTGCAGCTTCAGCCAGAAC +
Preference number: 3 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTQIKAR*CSFSQN
Trigger: GTTCTGGCTGAAGCTGCACAATCTGGCTTTGATCTG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCCTTTTTCTTGTCTCTaGACTAGAGGAGGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: CLGDGCAKISQITTKELTPFSCL*TRGGSV
Trigger: CACTGAACCTCCTCTAGTCAAGAGACAAGAAAAAGG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAGCTCTCCCGTTGGTGTaGGTTTCTGCAGTATTTAGC +
Preference number: 3 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTALPLV*VSAVFS
Trigger: GCTAAATACTGCAGAAACCAACACCAACGGGAGAGC...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCTGGACACTGTATGCTTaGTCTTATATTCTCTCACAA +
Preference number: 3 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAWTLYA*SYILSQ
Trigger: TTGTGAGAGAATATAAGACAAAGCATACAGTGTCCA...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 72 bp GGCATGAGTCAAAGCAAGCAAAGTAAACACACATATTaGCCAGAGAACAGGAGGACACTTCCATTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: GMSQSKQSKHTY*PENRRTLPLVP
Trigger: TGGCACCAATGGAAGTGTCCTCCTGTTCTCTGGTCAATATGTGTGTTTACTTTGCTTGCTTTGACTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR TCA 72 bp GTGTGCCGAATCATTCGGTCCAATTTTCTCACTGTTTaGAGTCCAAACTGTTTGTGGCTCTGGGATTCACCT +
Preference number: 3 (lower is better)
Translates to: VCRIIRSNFLTV*SPNCLWLWDSP
Trigger: AGGTGAATCCCAGAGCCACAAACAGTTTGGACTTCAAACAGTGAGAAAATTGGACCGAATGATTCGGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp GCAGCCCATGCTCAGAGCAAAAGTTCTAATACCCAATaGAGTGACACAAACATTCACCACACCTACTATGGT +
Preference number: 3 (lower is better)
Translates to: AAHAQSKSSNTQ*SDTNIHHTYYG
Trigger: ACCATAGTAGGTGTGGTGAATGTTTGTGTCACTGCATTGGGTATTAGAACTTTTGCTCTGAGCATGGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp ACACCCAGGCTTCGCTGCAGAATTTACACTCTGGGATaGGAGAAGCAAGAAATCCCGCTTATCAAACTAAAT +
Preference number: 3 (lower is better)
Translates to: TPRLRCRIYTLG*EKQEIPLIKLN
Trigger: ATTTAGTTTGATAAGCGGGATTTCTTGCTTCTCGCATCCCAGAGTGTAAATTCTGCAGCGAAGCCTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp TGGCCAATCACAAAGCAATGTGACAACATGTGCTTCTaGTACCCTTGTTTTCTCAGTACACCCTTCAGTCTG +
Preference number: 3 (lower is better)
Translates to: WPITKQCDNMCF*YPCFLSTPFSL
Trigger: CAGACTGAAGGGTGTACTGAGAAAACAAGGGTAGCAGAAGCACATGTTGTCACATTGCTTTGTGATTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp GTGTCCCACATGCCAAACATACCATTGTTCAGCAGTTaGCATAAGCCAGCTAACCCTTCAGATTGCCAATAT +
Preference number: 3 (lower is better)
Translates to: VSHMPNIPLFSS*HKPANPSDCQY
Trigger: ATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATGGTATGTTTGGCATGTGGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp AAAATCTGTAAAATTAGCTTGGCCTCAGAACAGGTGTaGCCAGGTATCAGGTGTCCCACATGCCAAACATAC +
Preference number: 3 (lower is better)
Translates to: KICKISLASEQV*PGIRCPTCQTY
Trigger: GTATGTTTGGCATGTGGGACACCTGATACCTGGGCACACCTGTTCTGAGGCCAAGCTAATTTTACAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp TGCACACACCTCAAATTCCCAGCCTCTGGTCCACTATaGTCAGGTCAACAGGACAATCATATCTATTTGACT +
Preference number: 3 (lower is better)
Translates to: CTHLKFPASGPL*SGQQDNHIYLT
Trigger: AGTCAAATAGATATGATTGTCCTGTTGACCTGAGCATAGTGGACCAGAGGCTGGGAATTTGAGGTGTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR GCA 72 bp GCTAGTGAGGCTACCCAGCTTGCTGTGGACACTGTATaGTTTGTCTTATATTCTCTCACAACGGTACATCAT +
Preference number: 3 (lower is better)
Translates to: ASEATQLAVDTV*FVLYSLTTVHH
Trigger: ATGATGTACCGTTGTGAGAGAATATAAGACAAAGCATACAGTGTCCACAGCAAGCTGGGTAGCCTCACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 72 bp CAGCTAACCAGCCTCGTTGATCCCAAATCCCAACCATaGCTACAATCTGAGCACAGCTCTTTACTATTCAAA +
Preference number: 3 (lower is better)
Translates to: QLTSLVDPKSQP*LQSEHSSLLFK
Trigger: TTTGAATAGTAAAGAGCTGTGCTCAGATTGTAGCCATGGTTGGGATTTGGGATCAACGAGGCTGGTTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp GCTCTCAGAGGCGATGTGACATGGTCTTCTAAAAGGTaGACTTTGGTATGGGAAAATGAGGGTGAAATGAAC +
Preference number: 3 (lower is better)
Translates to: ALRGDVTWSSKR*TLVWENEGEMN
Trigger: GTTCATTTCACCCTCATTTTCCCATACCAAAGTCCACCTTTTAGAAGACCATGTCACATCGCCTCTGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp TGTGGCTCTGGGATTCACCTTGTATTAAGACTTTCGTaGAGTTTGAGAAGCTGGATTGTCAGTCCCATGGAA +
Preference number: 3 (lower is better)
Translates to: CGSGIHLVLRLS*SLRSWIVSPME
Trigger: TTCCATGGGACTGACAATCCAGCTTCTCAAACTCCACGAAAGTCTTAATACAAGGTGAATCCCAGAGCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp TTTCTCCGTGGGAATCCCACTCACACGTATTTTTGTTaGCACTTGGGCCTATTAAAGGTGTGGTCTAGCATT +
Preference number: 3 (lower is better)
Translates to: FLRGNPTHTYFC*HLGLLKVWSSI
Trigger: AATGCTAGACCACACCTTTAATAGGCCCAAGTGCCAACAAAAATACGTGTGAGTGGGATTCCCACGGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp GAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATaGAGAAGACACAGCAAGCAGATGGCCATCTATAAA +
Preference number: 3 (lower is better)
Translates to: EMPERSVNPSAI*RRHSKQMAIYK
Trigger: TTTATAGATGGCCATCTGCTTGCTGTGTCTTCTCCATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CAA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACTCCTTCAGTGCTTCTaGTTCCCCCAAGGAATCACC +
Preference number: 3 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKLLQCF*FPQGIT
Trigger: GGTGATTCCTTGGGGGAACAAGAAGCACTGAAGGAG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGGAGAGGAGTGTCTTATaGGAACTCAGCCTTGCCCAG +
Preference number: 3 (lower is better)
Translates to: SMALFCRKVAISALRFYVERSVL*ELSLAQ
Trigger: CTGGGCAAGGCTGAGTTCCAATAAGACACTCCTCTC...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTCAGACTCCGAAATGTaGAGACAAGGGGCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSSDSEM*RQGAKK
Trigger: CTTCTTTGCCCCTTGTCTCAACATTTCGGAGTCTGA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGAGTCTTCTAGCAGGTaGGCTCCCTACCAAAGCAGA +
Preference number: 3 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKESSSR*APYQSR
Trigger: TCTGCTTTGGTAGGGAGCCAACCTGCTAGAAGACTC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGTCTCTGTGTCTCAGGTaGCACTCATACTTCCCCTTG +
Preference number: 3 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTESLCLR*HSYFPL
Trigger: CAAGGGGAAGTATGAGTGCAACCTGAGACACAGAGA...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 72 bp CCAGCTTTGTCAGCTAGAAGTATCCCCTGCAAGCTATaGATGTGGGTCACGACACTGAACAAAAAGCAATAT +
Preference number: 3 (lower is better)
Translates to: PALSARSIPCKL*MWVTTLNKKQY
Trigger: ATATTGCTTTTTGTTCAGTGTCGTGACCCACATTCATAGCTTGCAGGGGATACTTCTAGCTGACAAAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp GGCACTTGCCTTTTCAACATATCCCTTAATATCAACTaGGAACACACCCCTCTAACCTGTGGCCATCTTATC +
Preference number: 3 (lower is better)
Translates to: GTCLFNISLNIN*EHTPLTCGHLI
Trigger: GATAAGATGGCCACAGGTTAGAGGGGTGTGTTCTCAGTTGATATTAAGGGATATGTTGAAAAGGCAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp ACGGGTTCCAGATGGGATTTGTGGAGACACATCACATaGATCTCAATGAGCTTTGCAGTAAAATTCACTGCA +
Preference number: 3 (lower is better)
Translates to: TGSRWDLWRHIT*ISMSFAVKFTA
Trigger: TGCAGTGAATTTTACTGCAAAGCTCATTGAGATGCATGTGATGTGTCTCCACAAATCCCATCTGGAACCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp CTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATaGCAGAGAGATCTGTTAACCCTTCTGCCATATGGA +
Preference number: 3 (lower is better)
Translates to: LGYEGNAFIWKR*QRDLLTLLPYG
Trigger: TCCATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CCA 72 bp ATGCATGCACACAAAGATCAACGGAAGCGACACAAATaGGGCATATGGATTTGTATACCAGTAGGATTGTGG +
Preference number: 3 (lower is better)
Translates to: MHAHKDQRKRHK*GIWICIPVGLW
Trigger: CCACAATCCTACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGTGCATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp GGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATaGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTG +
Preference number: 3 (lower is better)
Translates to: GKLLGYEGNAFI*KRCQRDLLTLL
Trigger: CAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CAA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTATGTGTAGCAGGCACTaGAGTTTATATGAAGATGTT +
Preference number: 3 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLMCSRH*SLYEDV
Trigger: AACATCTTCATATAAACTCAAGTGCCTGCTACACAT...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTAGACTTTCGTGGAGTTaGAGAAGCTGGATTGTCAGT +
Preference number: 3 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSRLSWS*RSWIVS
Trigger: ACTGACAATCCAGCTTCTCAAACTCCACGAAAGTCT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGACGCAGTCATGACCTaGTTGCAATGGGATCTTGAA +
Preference number: 3 (lower is better)
Translates to: HCSAVAISQLTLQIANIFDAVMT*LQWDLE
Trigger: TTCAAGATCCCATTGCAACAAGGTCATGACTGCGTC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACATCTTTTGTCCCAGTaGGGAGAAACAGGAGCTGTG +
Preference number: 3 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKHLLSQ*GETGAV
Trigger: CACAGCTCCTGTTTCTCCCAACTGGGACAAAAGATG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTAAACGTGAATGTAGTTaGCACTATGAGCACGAGCAC +
Preference number: 3 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSKRECS*HYEHEH
Trigger: GTGCTCGTGCTCATAGTGCAAACTACATTCACGTTT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACACTCACACGTATTTTaGTTGGCACTTGGGCCTATT +
Preference number: 3 (lower is better)
Translates to: LCHELQHGPLNSSPFLILHSHVF*LALGPI
Trigger: AATAGGCCCAAGTGCCAACAAAAATACGTGTGAGTG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATCTGCCCTCACTCAGTTaGCAGAAGTTATCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYLPSLS*QKLSLC
Trigger: ACACAGAGATAACTTCTGCAAACTGAGTGAGGGCAG...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 72 bp AAAGGTGGACTTTGGTATGGGAAAATGAGGGTGAAATaGACTGGAGTGGCCATATTGGCTAATAGGATGTCA +
Preference number: 3 (lower is better)
Translates to: KGGLWYGKMRVK*TGVAILANRMS
Trigger: TGACATCCTATTAGCCAATATGGCCACTCCAGTTCATTTCACCCTCATTTTCCCATACCAAAGTCCACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp AAGCCAGAAGGATGGTTTGACTTCAAAAAGACAGACTaGGGCATTATAATAGGCTTGTTGTCCCAGAGTCTC +
Preference number: 3 (lower is better)
Translates to: KPEGWFDFKKTD*GIIIGLLSQSL
Trigger: GAGACTCTGGGACAACAAGCCTATTATAATGCCTCAGTCTGTCTTTTTGAAGTCAAACCATCCTTCTGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp TGTTTTTCCAAGATCTCTCAGCAGGAAATAGAAATGTaGAAGTTCTCTGCCTCCTATTCCCATTATCCTCCC +
Preference number: 3 (lower is better)
Translates to: CFSKISQQEIEM*KFSASYSHYPP
Trigger: GGGAGGATAATGGGAATAGGAGGCAGAGAACTTGCACATTTCTATTTCCTGCTGAGAGATCTTGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp AAACTTCATAGCTTCTGCTCAACTGCTGTGAAACATTaGCTCCAGATGCACACTGAGTCAAACATAGACTTG +
Preference number: 3 (lower is better)
Translates to: KLHSFCSTAVKH*LQMHTESNIDL
Trigger: CAAGTCTATGTTTGACTCAGTGTGCATCTGGAGGCAATGTTTCACAGCAGTTGAGCAGAAGCTATGAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp AAAAACTGGCCAATCACAAAGCAATGTGACAACATGTaGTTCTGCTACCCTTGTTTTCTCAGTACACCCTTC +
Preference number: 3 (lower is better)
Translates to: KNWPITKQCDNM*FCYPCFLSTPF
Trigger: GAAGGGTGTACTGAGAAAACAAGGGTAGCAGAAGCACATGTTGTCACATTGCTTTGTGATTGGCCAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp AAATGCCCATCAATCAATGAGCAGATAAAGAAACTGTaGTACACACACACACACACACACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: KCPSINEQIKKL*YTHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACAGCAAAGGAGTTCCTaGAGGTGGTCAATCCAAACA +
Preference number: 3 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKQQRSS*RWSIQT
Trigger: TGTTTGGATTGACCACCTCAAGGAACTCCTTTGCTG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp ACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTaGACAGTAGTCCGAAACAGAGGTGTTGCTTTTCTA +
Preference number: 3 (lower is better)
Translates to: TLISKAGMLFVY*TVVRNRGVAFL
Trigger: TAGAAAAGCAACACCTCTGTTTCGGACTACTGTTCAGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp CTCAACTGCTGTGAAACATTGCCTCCAGATGCACACTaGGTCAAACATAGACTTGTACATTGTGAGAAATGT +
Preference number: 3 (lower is better)
Translates to: LNCCETLPPDAH*VKHRLVHCEKC
Trigger: ACATTTCTCACAATGTACAAGTCTATGTTTGACTCAGTGTGCATCTGGAGGCAATGTTTCACAGCAGTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp GACACAAACATTCACCACACCTACTATGGTCAGCAGTaGCTTTCAGAAAGAGCAATCAATGATCAAAATCTC +
Preference number: 3 (lower is better)
Translates to: DTNIHHTYYGQQ*LSERAINDQNL
Trigger: GAGATTTTGATCATTGATTGCTCTTTCTGAAAGGCACTGCTGACCATAGTAGGTGTGGTGAATGTTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp ATAAAAAGGAATGAATTAATGGCATTCGAAGCGGCCTaGGTGAGATTGGAGACCACTATTCTAAGTGAAGCA +
Preference number: 3 (lower is better)
Translates to: IKRNELMAFEAA*VRLETTILSEA
Trigger: TGCTTCACTTAGAATAGTGGTCTCCAATCTCACCCAGGCCGCTTCGAATGCCATTAATTCATTCCTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp TGTAAAAGAATGTCAGTAATCCCGCAGCCCTATTACTaGGTATCTGCCCAGAGGAAAAGAAGTCATTATACA +
Preference number: 3 (lower is better)
Translates to: CKRMSVIPQPYY*VSAQRKRSHYT
Trigger: TGTATAATGACTTCTTTTCCTCTGGGCAGATACCCAGTAATAGGGCTGCGGGATTACTGACATTCTTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp GCTTTTCTAAGATCTAACCTGTCCTCTCTCCAAAGTTaGCAACAGATAACATGCTTCCTTTCCTCATCTGTT +
Preference number: 3 (lower is better)
Translates to: AFLRSNLSSLQS*QQITCFLSSSV
Trigger: AACAGATGAGGAAAGGAAGCATGTTATCTGTTGCCAACTTTGGAGAGAGGACAGGTTAGATCTTAGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CAA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGTACACCGTAAGTATTaGAGCTCTCAATCTACCTTT +
Preference number: 3 (lower is better)
Translates to: LCHELQHGPLNSSPFLILVHRKY*SSQSTF
Trigger: AAAGGTAGATTGAGAGCTCAAATACTTACGGTGTAC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGTCAAACAGGCCTTCTTaGAAGCCATTCCAATCCAAT +
Preference number: 3 (lower is better)
Translates to: SMALFCRKVAISALRFYVSNRPS*KPFQSN
Trigger: ATTGGATTGGAATGGCTTCAAAGAAGGCCTGTTTGA...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCCTTTTCTCAAAACTTaGGATGTAATCAATGGCCCT +
Preference number: 3 (lower is better)
Translates to: HCSAVAISQLTLQIANIFPFLKT*DVINGP
Trigger: AGGGCCATTGATTACATCCAAAGTTTTGAGAAAAGG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATTGACCTCCAAAACATaGTCCCACACTCTCCTTATA +
Preference number: 3 (lower is better)
Translates to: LICLHLDLGIPILQNHEKLTSKT*SHTLLI
Trigger: TATAAGGAGAGTGTGGGACAATGTTTTGGAGGTCAA...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR TCA 72 bp TATCAACTTTGGGATCCAAATGATAGGAAGCAATCATaGTCAGCACTTTCCAGAAGCCTGGGAGAAAAACAA +
Preference number: 3 (lower is better)
Translates to: YQLWDPNDRKQS*SALSRSLGEKQ
Trigger: TTGTTTTTCTCCCAGGCTTCTGGAAAGTGCTGATCATGATTGCTTCCTATCATTTGGATCCCAAAGTTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp TGGCACTTGGGCCTATTAAAGGTGTGGTCTAGCATTTaGTCTTCACTCATCTTAAGATTATTTTCCCATGTA +
Preference number: 3 (lower is better)
Translates to: WHLGLLKVWSSI*SSLILRLFSHV
Trigger: TACATGGGAAAATAATCTTAAGATGAGTGAAGAGCAAATGCTAGACCACACCTTTAATAGGCCCAAGTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTaGCATGATCCTGGCAATACACTGAATGTTTGTGTA +
Preference number: 3 (lower is better)
Translates to: MITHFSKDETIG*HDPGNTLNVCV
Trigger: TACACAAACATTCAGTGTATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR GCA 72 bp TCTCTCACAACGGTACATCATCTGCCATTCTTTGGTTaGACAACAAACAAGTCATTTTCTAACAACCAAGGT +
Preference number: 3 (lower is better)
Translates to: SLTTVHHLPFFG*TTNKSFSNNQG
Trigger: ACCTTGGTTGTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGTTGTGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR-3UTR CAA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTATAAGGAAAATATGCTaGAGGAGAATGAGTCATGCA +
Preference number: 3 (lower is better)
Translates to: HCSAVAISQLTLQIANIFIRKIC*RRMSHA
Trigger: TGCATGACTCATTCTCCTCAAGCATATTTTCCTTAT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGGCATTATAATAGGCTaGTTGTCCCAGAGTCTCTTG +
Preference number: 3 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAGIIIG*LSQSLL
Trigger: CAAGAGACTCTGGGACAACAAGCCTATTATAATGCC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp GTTGTCTGTTCTGTGTTTACCCGTAGGTGCCATCATTaGTTCCCAAAAGCATCAAGATTACACTTTTTAGAA +
Preference number: 3 (lower is better)
Translates to: VVCSVFTRRCHH*FPKASRLHFLE
Trigger: TTCTAAAAAGTGTAATCTTGATGCTTTTGGGAATCAATGATGGCACCTACGGGTAAACACAGAACAGACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp AGATTATTTTCCCATGTACAAATGCTGGTCCTGGCATaGACAGGGTACCACTTAAAAATCATTATCCCTTCA +
Preference number: 3 (lower is better)
Translates to: RLFSHVQMLVLA*TGYHLKIIIPS
Trigger: TGAAGGGATAATGATTTTTAAGTGGTACCCTGTTCATGCCAGGACCAGCATTTGTACATGGGAAAATAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp TTTGTGGAGACACATCACATGCATCTCAATGAGCTTTaGAGTAAAATTCACTGCACAGAGGTTAATCTAGAT +
Preference number: 3 (lower is better)
Translates to: FVETHHMHLNEL*SKIHCTEVNLD
Trigger: ATCTAGATTAACCTCTGTGCAGTGAATTTTACTGCAAAGCTCATTGAGATGCATGTGATGTGTCTCCACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR GCA 72 bp TTGGATGTAATCAATGGCCCTATTTTGCAGAAAAGTTaGAATTTCAGCTTTGAGGTTCTATGTGGCTGTTGT +
Preference number: 3 (lower is better)
Translates to: LDVINGPILQKS*NFSFEVLCGCC
Trigger: ACAACAGCCACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGATTACATCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp TTATCAGACTTGGACTTCAGTGTTTACACGTCTTGTTaGGTTTTAGGGATGTTGCATGTAAAAGAATGTCAG +
Preference number: 3 (lower is better)
Translates to: LSDLDFSVYTSC*VLGMLHVKECQ
Trigger: CTGACATTCTTTTACATGCAACATCCCTAAAACCCAACAAGACGTGTAAACACTGAAGTCCAAGTCTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CCA 72 bp ACGTATTTTTGTTGGCACTTGGGCCTATTAAAGGTGTaGTCTAGCATTTGCTCTTCACTCATCTTAAGATTA +
Preference number: 3 (lower is better)
Translates to: TYFCWHLGLLKV*SSICSSLILRL
Trigger: TAATCTTAAGATGAGTGAAGAGCAAATGCTAGACCACACCTTTAATAGGCCCAAGTGCCAACAAAAATACGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR-3UTR CAA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGCAAAATCAGAAATTTaGCTGGTCTTTTCACCCTGC +
Preference number: 3 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAAKSEI*LVFSPC
Trigger: GCAGGGTGAAAAGACCAGCAAAATTTCTGATTTTGC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp CCTGTTAACATATCAGGTCAAACTTTCTCTACCTGGTaGGTTATTCCCCAAATGATATCTCTGAAATCCTTA +
Preference number: 3 (lower is better)
Translates to: PVNISGQTFSTW*VIPQMISLKSL
Trigger: TAAGGATTTCAGAGATATCATTTGGGGAATAACTCACCAGGTAGAGAAAGTTTGACCTGATATGTTAACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR TCA 72 bp ATTCCTCTCAGGGAACGTAATATCCTAATAATGCACTaGAGTAGGTACCAGCTGATTTTCCAGATATTGAAA +
Preference number: 3 (lower is better)
Translates to: IPLRERNILIMH*SRYQLIFQILK
Trigger: TTTCAATATCTGGAAAATCAGCTGGTACCTACTTCAGTGCATTATTAGGATATTACGTTCCCTGAGAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GAAACACGTGTCCGGCTTGTGGCAGTTGTGTCCCTGACGGAAGTACTGGGGGTTGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: ETRVRLVAVVSLTEVLGVGPGIQ*RGRGDA
Trigger: GGCATCACCACGCCCTCGTCACTGGATGCCGGGCCC...AACCCCCAGTACTTCCGTCAGGGACACAACTGCCACAAGCCGGACACGTGTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR TCA 90 bp GAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACCATCCACAGGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: EAFAESGWDPDTKNHHPQGPGIQ*RGRGDA
Trigger: GGCATCACCACGCCCTCGTCACTGGATGCCGGGCCC...CTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGGGGAAGGGGCAACCCTaGCAGTGGTGGATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWGKGQP*QWWMGE
Trigger: TTCCCCCATCCACCACTGGCAGGGTTGCCCCTTCCC...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CTCCACCTCTGCTTAGGTGCTCTCTGTGACTCTTCCCCACTGGAGGTTGCAGGGCCAGTGCAGCGTTGGTaGGGGGTTGCCACGCACCAC +
Preference number: 4 (lower is better)
Translates to: LHLCLGALCDSSPLEVAGPVQRW*GVATHH
Trigger: GTGGTGCGTGGCAACCCCCCACCAACGCTGCACTGG...CCCTGCAACCTCCAGTGGGGAAGAGTCACAGAGAGCACCTAAGCAGAGGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AGGGTGCCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCGGCCCCATGGGCCAGTaGAGCTGGGAGCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RVPGHWWLMQFLLSIPGSGPMGQ*SWEPEV
Trigger: GACTTCTGGCTCCCAGCTCCACTGGCCCATGGGGCC...GGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACAGCAGCCGCCGCGAATaGCTCGCCGCGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHSSRRE*LAARLQ
Trigger: CTGCAGCCGCGCGGCGAGCCATTCGCGGCGGCTGCT...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGAGAGGTTCTGGCTGTTaGGCTTGGCCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWRGSGC*AWPPPA
Trigger: AGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCT...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
3UTR CAA 72 bp TCACTCTCACTCAGTCCAGGAGAGGATCCGGTGAGGTaGGCATGGCAGAGAGACCAGCCTGGGTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLSLSPGEDPVR*AWQRDQPGCPG
Trigger: TCCAGGGCACCCAGGCTGGTCTCTCTGCCATGCCAACCTCACCGGATCCTCTCCTGGACTGAGTGAGAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWATRVW*AGYLTG
Trigger: ACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGC...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CTCCACCTCTGCTTAGGTGCTCTCTGTGACTCTTCCCCACTGGAGGTTGCAGGGCTTGGTGCCAATACTTaGGCCTGGCTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHLCLGALCDSSPLEVAGLGANT*AWLPLL
Trigger: GAGGAGGGGGAGCCAGGCTCAAGTATTGGCACCAAG...CCCTGCAACCTCCAGTGGGGAAGAGTCACAGAGAGCACCTAAGCAGAGGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGCCGTGGTTGATGTGGTaGAGTGGGCTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRPWLMW*SGLAES
Trigger: GGACTCAGCCAGCCCACTGCACCACATCAACCACGG...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR GCA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGGGACACTTCCATTGGTaGCATGAGAGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWGHFHW*HERGWR
Trigger: CCTCCAGCCCCTCTCATGGCACCAATGGAAGTGTCC...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGCTTGGGAGGAGGCCCTaGACCCAAAGCATCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRLGRRP*TQSISR
Trigger: CCTGCTGATGCTTTGGGTCCAGGGCCTCCTCCCAAG...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGCAGCCGCCGCGAATaGCTCGCCGCGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSSRRE*LAARLQ
Trigger: CTGCAGCCGCGCGGCGAGCCATTCGCGGCGGCTGCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGCGGTCTGCCGGGCATaGTGGCCGGCTCGGCGATCG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVAVCRA*WPARRS
Trigger: CGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR TCA 90 bp CCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGCCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: PGHWWLMQFLLSIPGSKEPCPRR*ACEDCA
Trigger: GGCGCAGTCTTCACACGCTCAACGCCGTGGACATGG...CTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGPGIQ*RGRGDA
Trigger: GGCATCACCACGCCCTCGTCACTGGATGCCGGGCCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGACTGGGGGTTCTCAATaGCAGGGATGCGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWTGGSQ*QGCESC
Trigger: GCATGACTCGCATCCCTGTCATTGAGAACCCCCAGT...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AGGGTGCCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCTGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RVPGHWWLMQFLLSIPGSWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...GGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR TCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGATCGGGCTGGGATCCTaGCACGAAGAACCACCATCC +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRIGLGS*HEEPPS
Trigger: GGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGAT...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGCTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGLFPES*PSRRGK
Trigger: CTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAG...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp TTAGGTGGGCAGCCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTGGGGTGGTGTTAAAGGGTaGCGGGGCACTGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LGGQPMLTSYNGGPMGQWGGVKG*RGTGGS
Trigger: TGAGCCACCAGTGCCCCGGCACCCTTTAACACCACC...CCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCACCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp GAAACACGTGTCCGGCTTGTGGCAGTTGTGTCCCTGACGGAAGTACTGGGGGTTGGTGGTGTTAAAGGGTaGCGGGGCACTGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ETRVRLVAVVSLTEVLGVGGVKG*RGTGGS
Trigger: TGAGCCACCAGTGCCCCGGCACCCTTTAACACCACC...AACCCCCAGTACTTCCGTCAGGGACACAACTGCCACAAGCCGGACACGTGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCTAGTGGCGCGGTCTaGCGGGCATGGTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPSGAV*RAWWPA
Trigger: AGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGTGGCCATTGATGGTCTaGTTGGCTGTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRWPLMV*LAVPSG
Trigger: CCCACTGGGCACAGCCAACCAGACCATCAATGGCCA...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GAAACACGTGTCCGGCTTGTGGCAGTTGTGTCCCTGACGGAAGTACTGGGGGTTGGCGTGGTGATGCCGTaGTTGATGTGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ETRVRLVAVVSLTEVLGVGVVMP*LMWCSG
Trigger: CCCACTGCACCACATCAACCACGGCATCACCACGCC...AACCCCCAGTACTTCCGTCAGGGACACAACTGCCACAAGCCGGACACGTGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR CCA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGAGGGTGCCGGGGCACTaGTGGCTCATGCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGRVPGH*WLMQFL
Trigger: TAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACAGCGAGCCCCCTCTTTaGGAGAGGGTGGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDSEPPL*ERVAME
Trigger: CTCCATGGCCACCCTCTCCCAAAGAGGGGGCTCGCT...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGCAGCCGCCGCGAATaGCTCGCCGCGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSSRRE*LAARLQ
Trigger: CTGCAGCCGCGCGGCGAGCCATTCGCGGCGGCTGCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTCTGCCGGGCATGGTaGCCGGCTCGGCGATCGCTG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVVCRAW*PARRSL
Trigger: CAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGAC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGCGGTCTGCCGGGCATaGTGGCCGGCTCGGCGATCG +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLAVCRA*WPARRS
Trigger: CGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCTGCGAGTCATGCCAATaGCCACAGTGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ASLDPKRTMPRASNLSEGCESCQ*PQCRAR
Trigger: CCGGGCCCGACACTGTGGTCATTGGCATGACTCGCA...GCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR TCA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGACTGGGGGTTCTCAATaGCAGGGATGCGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGTGGSQ*QGCESC
Trigger: GCATGACTCGCATCCCTGTCATTGAGAACCCCCAGT...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR TCA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGAAGGGCCTTTGTCCCTaGTTCCCTTGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGKGLCP*FPWSLV
Trigger: CACAAGGGACCAAGGGAATCAGGGACAAAGGCCCTT...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTGCTCCTGCCAGAGCTaGATCCAGCGGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPCSCQS*IQRMSQ
Trigger: CTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCA...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGGGCAACACTGGCATTaGTCATGCCCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRGQHWH*SCPPRS
Trigger: AGAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCC...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATCCGTGGTTGATGTGGTaGAGTGGGCTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHPWLMW*SGLAES
Trigger: GGACTCAGCCAGCCCACTGCACCACATCAACCACGG...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCCTAGTGGCGCGGTCTaGCGGGCATGGTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCPSGAV*RAWWPA
Trigger: AGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR GCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTGTGGCCAGGTCTCGGTaGACAAAGTGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVVARSR*TKCWEA
Trigger: GGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCAC...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGCAACCCTGCCAGTGGTaGATGGGGGAAAACACCCAT +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRQPCQW*MGENTH
Trigger: ATGGGTGTTTTCCCCCATCCACCACTGGCAGGGTTG...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACGGGCAACCCTGCCAGTaGTGGATGGGGGAAAACACC +
Preference number: 4 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDGQPCQ*WMGENT
Trigger: GGTGTTTTCCCCCATCCACCACTGGCAGGGTTGCCC...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGAGGCTGGAGCACGGCTaGACTTCATCAGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWRLEHG*TSSGFL
Trigger: AAGAAAGCCTGATGAAGTCCAGCCGTGCTCCAGCCT...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGCAGCCGCCGCGAATaGCTCGCCGCGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSSRRE*LAARLQ
Trigger: CTGCAGCCGCGCGGCGAGCCATTCGCGGCGGCTGCT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCGGGTCCGGGGGCTCTaGAAGCGAGGCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRVRGL*KRGALS
Trigger: GGAGAGCGCGCCTCGCTTCCAGAGCCCCCGGACCCG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR TCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACACGGCGTTGAGCGTGTaGAGACTGCGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDTALSV*RLRQFS
Trigger: AGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGT...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCACCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWAPCPRR*ACEDCA
Trigger: GGCGCAGTCTTCACACGCTCAACGCCGTGGACATGG...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCGCAAAGGCTCTGGGCTaGATGCTCCGAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TMPRASNLSEGPAYQGDIAKALG*MLRSPE
Trigger: CTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGC...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACAGAGGTTCTGGCTGTTaGGCTTGGCCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHRGSGC*AWPPPA
Trigger: AGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCT...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGHIRKG*SRAIAS
Trigger: ACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTG...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGPGIQ*RGRGDA
Trigger: GGCATCACCACGCCCTCGTCACTGGATGCCGGGCCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCTGCGAGTCATGCCAATaGCCACAGTGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTACESCQ*PQCRAR
Trigger: CCGGGCCCGACACTGTGGTCATTGGCATGACTCGCA...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AGGGTGCCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCCCCAGCCTACCAAGGTaGCATCAAAACAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RVPGHWWLMQFLLSIPGSPSLPR*HQNKEA
Trigger: AGCCTCCTTGTTTTGATGTCACCTTGGTAGGCTGGG...GGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR TCA 90 bp GGAGCTGGGAGCCAGAAGTCTACTCCACCAATGAGTCAGCAAATACGGGAGAGTTCCAAGCAGGGAAAGTaGGGCTGGAGCACGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GAGSQKSTPPMSQQIRESSKQGK*GWSTAG
Trigger: TCCAGCCGTGCTCCAGCCTCACTTTCCCTGCTTGGA...ACTCTCCCGTATTTGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TTAGGTGGGCAGCCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTGGGTGGGCAGCCTATGCTaGCTTCATACAATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGGQPMLTSYNGGPMGQWVGSLC*LHTMEA
Trigger: GGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCAC...CCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCACCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp CCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGTGCTCCTGCCAGAGCTaGATCCAGCGGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: PGHWWLMQFLLSIPGSKECSCQS*IQRMSQ
Trigger: CTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCA...CTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACGCACCACAAACTCGATaGAGTGCTCCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDAPQTR*SAPGAA
Trigger: AGCTGCGCCTGGAGCACTGCATCGAGTTTGTGGTGC...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp CCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAGAGGCTGCCCATTGTaGAGCCAGTGCAGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: PGHWWLMQFLLSIPGSKERGCPL*SQCSVG
Trigger: ACCAACGCTGCACTGGCTGCACAATGGGCAGCCTCT...CTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCTAGTGGCGCGGTCTaGCGGGCATGGTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPSGAV*RAWWPA
Trigger: AGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCAGTGCAGCGTTGGTaGGGGGTTGCCACGCACCAC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPVQRW*GVATHH
Trigger: GTGGTGCGTGGCAACCCCCCACCAACGCTGCACTGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTTGTCGGTGTGGTGCAGTGGGCTaGCTGAGTCCTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: PSRMASSWVKPPAAKACRCGAVG*LSPPHH
Trigger: GTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACA...CCGACAAGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp ATGCTCCCAGTTTCATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCACCCGGGATCATGGGCTaGCAGGAAGGGCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: MLPVSCSPPLGGQPMLTSPGIMG*QEGPLS
Trigger: GGACAAAGGCCCTTCCTGCCAGCCCATGATCCCGGG...TGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCATGAAACTGGGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAATCCCGGGATCATaGGCTGGCAGGAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ASLDPKRTMPRASNLSEGPIPGS*AGRKGL
Trigger: AAGGCCCTTCCTGCCAGCCCATGATCCCGGGATTGG...GCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGCTCTCCACCATTAGGTaGGCAGCCTATGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRLSTIR*AAYADF
Trigger: GAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAG...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGTCTGCCGGGCATGGTaGCCGGCTCGGCGATCGCTG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGVCRAW*PARRSL
Trigger: CAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGAC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTCCTGGCCTTAAAGGGTaGGGTGGGGAGCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVPGLKG*GGEQGM
Trigger: CATTCCCTGCTCCCCACCCCACCCTTTAAGGCCAGG...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPCPRR*ACEDCA
Trigger: GGCGCAGTCTTCACACGCTCAACGCCGTGGACATGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGAATGCTCCGAAGTCCTaGGTTCTTGATGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWNAPKS*VLDGQL
Trigger: AAGCTGACCATCAAGAACTCAGGACTTCGGAGCATT...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACGCAAAGGCTCTGGGCTaGATGCTCCGAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHAKALG*MLRSPE
Trigger: CTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGC...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTCCACCTCTGCTTAGGTGCTCTCTGTGACTCTTCCCCACTGGAGGTTGCAGGGTCAGGAAGGTCACACTaGCTGATGTTCATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LHLCLGALCDSSPLEVAGSGRSH*LMFMRK
Trigger: CTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGA...CCCTGCAACCTCCAGTGGGGAAGAGTCACAGAGAGCACCTAAGCAGAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AACCCCATGGAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACTGGACTGCAGCCCAGTaGCTATCCAGTCCACATCAG +
Preference number: 4 (lower is better)
Translates to: NPMEAFAESGWDPDTKNHWTAAQ*LSSPHQ
Trigger: CTGATGTGGACTGGATAGTCACTGGGCTGCAGTCCA...GTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CTCCACCTCTGCTTAGGTGCTCTCTGTGACTCTTCCCCACTGGAGGTTGCAGGGTTCAGATTGGTCTGGTaGGTGTTGATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LHLCLGALCDSSPLEVAGFRLVW*VLMDCS
Trigger: GCTGCAGTCCATCAACACTCACCAGACCAATCTGAA...CCCTGCAACCTCCAGTGGGGAAGAGTCACAGAGAGCACCTAAGCAGAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATCAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHQCTSG*SHCPHS
Trigger: CGAGTGAGGACAATGGCTTCACCCTGACGTGCATTG...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISGPGIQ*RGRGDA
Trigger: GGCATCACCACGCCCTCGTCACTGGATGCCGGGCCC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGCGAGTCATGCCAATaGCCACAGTGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVCESCQ*PQCRAR
Trigger: CCGGGCCCGACACTGTGGTCATTGGCATGACTCGCA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCCTTAGGTGCTCTCTGTaGCTCTTCCCCACTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TMPRASNLSEGPAYQGDILRCSL*LFPTGG
Trigger: ACCTCCAGTGGGGAAGAGTCACAGAGAGCACCTAAG...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACAGGGGCTGGAAACGTaGGGAGAATGCCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVQGLET*GECQGA
Trigger: GGCCCCTTGGCATTCTCCTCACGTTTCCAGCCCCTG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTGCTCCTGCCAGAGCTaGATCCAGCGGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHCSCQS*IQRMSQ
Trigger: CTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTAGGTGGGCAGCCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTGGCACTGGCATTGCTCATaGCCACCACGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LGGQPMLTSYNGGPMGQWHWHCS*PPRSLQ
Trigger: TTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTG...CCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCACCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTCACTGGCATTGCTCATaGCCACCACGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPHWHCS*PPRSLQ
Trigger: TTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTG...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTGGTCTGGTTGGCTGTaGCCAGTGGGTTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPWSGWL*PVGFWQ
Trigger: TTGCCAAAAACCCACTGGGCACAGCCAACCAGACCA...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp GAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACCATCCACAGGATAGTGGCAGGAGCTaGCTCGTAGGCCGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: EAFAESGWDPDTKNHHPQDSGRS*LVGREK
Trigger: TTTTTCCCGGCCTACGAGGCAGCTCCTGCCACTATC...CTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp CCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTTGTCGGTTCCCCACTGGAGGTTaGAGGGCGACGAGGTCACTA +
Preference number: 4 (lower is better)
Translates to: PSRMASSWVKPPAAKACRFPTGG*RATRSL
Trigger: TAGTGACCTCGTCGCCCTGCAACCTCCAGTGGGGAA...CCGACAAGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTGGCCAGGTCTCGGTaGACAAAGTGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVVARSR*TKCWEA
Trigger: GGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCAC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGCTAGCCTCTGCCGCTaGCACACCACACTGAACGGG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVASLCR*HTTLNG
Trigger: CCCGTTCAGTGTGGTGTGGCAGCGGCAGAGGCTAGC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS-3UTR CCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACCAGGCTCACCACACGTaGGGGATAGTAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDQAHHT*GIVDSE
Trigger: CTCACTGTCTACTATCCCCCACGTGTGGTGAGCCTG...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTGGCCATTGATGGTCTaGTTGGCTGTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHWPLMV*LAVPSG
Trigger: CCCACTGGGCACAGCCAACCAGACCATCAATGGCCA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAGTTGAAAATGGGGGGCGTGGTGATGCCGTaGTTGATGTGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RRESHPLPSPQWIKLKMGGVVMP*LMWCSG
Trigger: CCCACTGCACCACATCAACCACGGCATCACCACGCC...CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCAGGGTGCCGGGGCACTaGTGGCTCATGCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ASLDPKRTMPRASNLSEGRVPGH*WLMQFL
Trigger: TAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT...GCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp CAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGCCTGCCAGTGGTGGATaGGGGAAAACACCCATCTGG +
Preference number: 4 (lower is better)
Translates to: QREQCLELPTSQRAQPTKPASGG*GKTPIW
Trigger: CCAGATGGGTGTTTTCCCCCATCCACCACTGGCAGG...CTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCGAGCACAGTGATGATTaGAGGGAAGGGGCAACCCTG +
Preference number: 4 (lower is better)
Translates to: TMPRASNLSEGPAYQGDIEHSDD*REGATL
Trigger: CAGGGTTGCCCCTTCCCTCCAATCATCACTGTGCTC...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp AGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAGTTGAAAATGGGGGTGACTCTTCCCCACTaGAGGTTGCAGGGCGACGAG +
Preference number: 4 (lower is better)
Translates to: RRESHPLPSPQWIKLKMGVTLPH*RLQGDE
Trigger: CTCGTCGCCCTGCAACCTCCAGTGGGGAAGAGTCAC...CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTTGTCGGGGAGGACACTTCCATTaGTGCCATGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSRMASSWVKPPAAKACRGGHFH*CHERGW
Trigger: CCAGCCCCTCTCATGGCACCAATGGAAGTGTCCTCC...CCGACAAGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACCATCCACAGTCCCAGGTGATACTCTaGAGGCTGCCCCAGATACTG +
Preference number: 4 (lower is better)
Translates to: EAFAESGWDPDTKNHHPQSQVIL*RLPQIL
Trigger: CAGTATCTGGGGCAGCCTCCAGAGTATCACCTGGGA...CTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGCAGGATGAGGAGAGCTaGAGGGGGCGAGATAAACAC +
Preference number: 4 (lower is better)
Translates to: PGHWWLMQFLLSIPGSKEQDEES*RGRDKH
Trigger: GTGTTTATCTCGCCCCCTCCAGCTCTCCTCATCCTG...CTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACGGGTCCGGGGGCTCTaGAAGCGAGGCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERVRGL*KRGALS
Trigger: GGAGAGCGCGCCTCGCTTCCAGAGCCCCCGGACCCG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGCGGTCTGCCGGGCATaGTGGCCGGCTCGGCGATCG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEAVCRA*WPARRS
Trigger: CGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCCGGGCAGCCAGGGTaGGATCCTTCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSGQPG*DPSGPS
Trigger: TGAAGGCCCTGAAGGATCCCACCCTGGCTGCCCGGA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGCTCGGCCTCCCTCTaGAAATCCTTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSSASL*KSFRAA
Trigger: GGCTGCCCGGAAGGATTTCCAGAGGGAGGCCGAGCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTASSPLA*RGCPST
Trigger: TGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCT...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATCCAGGTAGATTGGGGTaGCCTTCCCCAAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHPGRLG*PSPKHG
Trigger: TCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGG...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAAGGTCGGCCCCACTGTaGTATGTGGCAGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVRSAPL*YVAAAR
Trigger: CCTGGCTGCTGCCACATACCACAGTGGGGCCGACCT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCGGCCGCCGGCAATTaGTCTCAGTCTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPAAGN*SQSCCR
Trigger: TCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGAGGTTCTGGCTGTTaGGCTTGGCCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRGSGC*AWPPPA
Trigger: AGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCACAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPQCTSG*SHCPHS
Trigger: CGAGTGAGGACAATGGCTTCACCCTGACGTGCATTG...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACGGGGATAGTAGACAGTaGGGGCAACACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHGDSRQ*GQHWHC
Trigger: GCAATGCCAGTGTTGCCCTCACTGTCTACTATCCCC...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPSIPHG*SWTPAE
Trigger: CTCTGCGGGAGTCCAAGATCATCCATGTGGAATACT...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGPGIQ*RGRGDA
Trigger: GGCATCACCACGCCCTCGTCACTGGATGCCGGGCCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLGPGIQ*RGRGDA
Trigger: GGCATCACCACGCCCTCGTCACTGGATGCCGGGCCC...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGCGAGTCATGCCAATaGCCACAGTGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCCESCQ*PQCRAR
Trigger: CCGGGCCCGACACTGTGGTCATTGGCATGACTCGCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGTCCTTGGTCGGGCTaGGGTTGTAGCACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVCPWSG*GCSTRP
Trigger: TGGCCGAGTGCTACAACCTCAGCCCGACCAAGGACA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTCAGCCAGGAAGGCAGTaGTTCCCCAGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLQPGRQ*FPSAGA
Trigger: TGCCCCAGCACTGGGGAATCACTGCCTTCCTGGCTG...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGCCCCAGAAGCTGGCTaGCAGCTCTCCCGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLAPEAG*QLSRWC
Trigger: ACACCAACGGGAGAGCTGTCAGCCAGCTTCTGGGGC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAAGGGGAACAGCCTGGTaGAACGCAGGCAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWARGTAW*NAGKWL
Trigger: TAGCCACTTGCCTGCGTTTCACCAGGCTGTTCCCCT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCTACTGGCGTTCCCATTaGTGTTCCCTGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: TMPRASNLSEGPAYQGDIYWRSH*CSLNPA
Trigger: GGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTA...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTGACTCCCGCAGAGGCTaGCCATTGTGCAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPDSRRG*PLCSQC
Trigger: GCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTC...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACTCCCGCAGAGGCTaGCCATTGTGCAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCDSRRG*PLCSQC
Trigger: GCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AACCCCATGGAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACTGGTCTGGTTGGCTGTaGCCAGTGGGTTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NPMEAFAESGWDPDTKNHWSGWL*PVGFWQ
Trigger: TTGCCAAAAACCCACTGGGCACAGCCAACCAGACCA...GTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCGTGGTTGATGTGGTaGAGTGGGCTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPWLMW*SGLAES
Trigger: GGACTCAGCCAGCCCACTGCACCACATCAACCACGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCCTAGTGGCGCGGTCTaGCGGGCATGGTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTPSGAV*RAWWPA
Trigger: AGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATCGCCGAGCGATCAGATaGAAAATCCTTCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHRRAIR*KILQRL
Trigger: CAGACGCTGAAGGATTTTGCATCTGATCGCTCGGCG...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGGCCAGGTCTCGGTaGACAAAGTGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCVARSR*TKCWEA
Trigger: GGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCAC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGGGCCTGGCACAGGTaGCAAGTAGATTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGAWHR*QVDSPL
Trigger: CAGGGGAGAATCTACTTGGCACCTGTGCCAGGCCCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACCAGCTCAAAGGCAGATaGATCAATCCTCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHQLKGR*INPPRG
Trigger: GCCCCTGGGAGGATTGATGCATCTGCCTTTGAGCTG...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTCCAGGACGTCCAGGCTaGCGGCAGTCTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLPGRPG*RQSLQL
Trigger: CAGCTGAAGAGACTGCCGGCAGCCTGGACGTCCTGG...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACGGCCCACATTTCAGCTaGCTTCAGCTAACCAGGACG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHGPHFS*LQLTRT
Trigger: CGTCCTGGTTAGCTGAAGGCAGCTGAAATGTGGGCC...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTGCCTTCAGCGGCAACTaGCCCCCACCTATGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAAFSGN*PPPMQG
Trigger: GCCTTGCATAGGTGGGGGGCAGTTGCCGCTGAAGGC...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACAGAGACCAGCCTGGGTaGCCTGGAGCGTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHRDQPG*PGAFIK
Trigger: TTTGATGAACGCTCCAGGGCACCCAGGCTGGTCTCT...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAGCCTCAGAACAGGTGTaGCCAGGTATCAGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWAASEQV*PGIRCP
Trigger: GGGACACCTGATACCTGGGCACACCTGTTCTGAGGC...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCACGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGT +
Preference number: 4 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPRRLSV*KSCHES
Trigger: ACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCG...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp CAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGACGGTCAGGTTGACGTaGCTCACGCTGATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QREQCLELPTSQRAQPTKTVRLT*LTLISG
Trigger: TCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGT...CTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCAGTGCAGCGTTGGTaGGGGGTTGCCACGCACCAC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPVQRW*GVATHH
Trigger: GTGGTGCGTGGCAACCCCCCACCAACGCTGCACTGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGTGGTGCAGTGGGCTaGCTGAGTCCTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVCGAVG*LSPPHH
Trigger: GTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGCGTGGTGATGCCGTaGTTGATGTGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGVVMP*LMWCSG
Trigger: CCCACTGCACCACATCAACCACGGCATCACCACGCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GGAGCTGGGAGCCAGAAGTCTACTCCACCAATGAGTCAGCAAATACGGGAGAGTACACACCTGGAGCCCTaGAGAGAACCTGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: GAGSQKSTPPMSQQIRESTHLEP*REPELP
Trigger: TGGGAGTTCAGGTTCTCTCCAGGGCTCCAGGTGTGT...ACTCTCCCGTATTTGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTCTGCCGGGCATGGTaGCCGGCTCGGCGATCGCTG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVCRAW*PARRSL
Trigger: CAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCTCCGGGCAGCCAGGGTaGGATCCTTCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTSGQPG*DPSGPS
Trigger: TGAAGGCCCTGAAGGATCCCACCCTGGCTGCCCGGA...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGCTCGGCCTCCCTCTaGAAATCCTTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSSASL*KSFRAA
Trigger: GGCTGCCCGGAAGGATTTCCAGAGGGAGGCCGAGCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTAGCTCGGCCTCCCTCTaGAAATCCTTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLASSASL*KSFRAA
Trigger: GGCTGCCCGGAAGGATTTCCAGAGGGAGGCCGAGCT...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSSPLA*RGCPST
Trigger: TGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCATCGTACACCTCTTTaGGGCAGACTCGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVHRTPL*GRLGAA
Trigger: AGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACATCGTACACCTCTTTaGGGCAGACTCGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVHRTPL*GRLGAA
Trigger: AGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTTCAACCGCTGCTGTaGTTCCCTCTGCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVVQPLL*FPLPAP
Trigger: GGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAAC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAAGCAGAGGAGATCTGTaGGGCCAGGCTGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWASRGDL*GQAVGF
Trigger: GAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGGGGCCCCGTGGCCTaGGAGGAACACATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRGPVA*EEHILS
Trigger: GGAGAGGATGTGTTCCTCCCAGGCCACGGGGCCCCT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACCAACTGCCCAGAGAGTaGGCTCTATTTGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHQLPRE*ALFVWP
Trigger: GGGCCAGACAAATAGAGCCCACTCTCTGGGCAGTTG...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACGGCGTTGAGCGTGTaGAGACTGCGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVTALSV*RLRQFS
Trigger: AGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLPCPRR*ACEDCA
Trigger: GGCGCAGTCTTCACACGCTCAACGCCGTGGACATGG...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGCAAAGGCTCTGGGCTaGATGCTCCGAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVAKALG*MLRSPE
Trigger: CTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVATRVW*AGYLTG
Trigger: ACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGAGGTTCTGGCTGTTaGGCTTGGCCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRGSGC*AWPPPA
Trigger: AGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGGAGCCATCAGCGTTaGTGCAGTAGAGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGSHQR*CSRGSG
Trigger: GCCAGAACCTCTACTGCATCAACGCTGATGGCTCCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACGAAGGTCACACTGACTaGTGTTCATGCGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDEGHTD*CSCGRE
Trigger: CTCTCTTCCGCATGAACATCAGTCAGTGTGACCTTC...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp GAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACCATCCACAGTCACCAGCGTCAAGTTaGTGGCATGAACATTGGTCC +
Preference number: 4 (lower is better)
Translates to: EAFAESGWDPDTKNHHPQSPASS*WHEHWS
Trigger: GGACCAATGTTCATGCCATCAACTTGACGCTGGTGA...CTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TGTGGTCCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTCAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: CGPSRMASSWVKPPAAKAQCTSG*SHCPHS
Trigger: CGAGTGAGGACAATGGCTTCACCCTGACGTGCATTG...AGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCGGGGATAGTAGACAGTaGGGGCAACACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAGDSRQ*GQHWHC
Trigger: GCAATGCCAGTGTTGCCCTCACTGTCTACTATCCCC...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTTGCGAGTCATGCCAATaGCCACAGTGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVCESCQ*PQCRAR
Trigger: CCGGGCCCGACACTGTGGTCATTGGCATGACTCGCA...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGATGATTGTCTATGTTTaGAAAGACCCACGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRMIVYV*KDPRVR
Trigger: CCGGACACGTGGGTCTTTTCAAACATAGACAATCAT...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGTTCCATTCTTTCCTCTaGGACCTAACTTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRFHSFL*DLTWCQ
Trigger: TTGGCACCAAGTTAGGTCTCAGAGGAAAGAATGGAA...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGCTCAGTGGATCAAGTTaGAAATGGGGGAAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: QREQCLELPTSQRAQPTKLSGSS*KWGKRA
Trigger: GGCTCGCTTCCCCCATTTTCAACTTGATCCACTGAG...CTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAAATCCTTCAGCGTCTaGAACCATCGCGGACGCCGC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVKSFSV*NHRGRR
Trigger: GCGGCGTCCGCGATGGTTTCAGACGCTGAAGGATTT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGTCCTTGGTCGGGCTaGGGTTGTAGCACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCCPWSG*GCSTRP
Trigger: TGGCCGAGTGCTACAACCTCAGCCCGACCAAGGACA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCTGTCCTTGGTCGGGCTaGGGTTGTAGCACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTCPWSG*GCSTRP
Trigger: TGGCCGAGTGCTACAACCTCAGCCCGACCAAGGACA...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTAAGGTGGCAGCAATCTaGCAACTGCGGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVKVAAI*QLRSPS
Trigger: TGAAGGAGACCGCAGTTGTCAGATTGCTGCCACCTT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCACTTGCCCAGGCCCAGTaGGCCTTCAGCGGCAACTGC +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISLAQAQ*AFSGNC
Trigger: GCAGTTGCCGCTGAAGGCTCACTGGGCCTGGGCAAG...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACTAGAGGAGGTTCAGTaGTGCCCAAGGTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVLEEVQ*CPRSPQ
Trigger: CTGAGGGGACCTTGGGCATCACTGAACCTCCTCTAG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATTTAGCCAGTGCCGGCTaGGAGTGGAAAATACAAGAC +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHLASAG*EWKIQD
Trigger: GTCTTGTATTTTCCACTCTCAGCCGGCACTGGCTAA...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTGACAAGGGCGTCCCCTaGATCCCTCATGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLDKGVP*IPHAPS
Trigger: GGAGGGAGCATGAGGGATTCAGGGGACGCCCTTGTC...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVLFPES*PSRRGK
Trigger: CTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGCTCCTGCCAGAGCTaGATCCAGCGGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVCSCQS*IQRMSQ
Trigger: CTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGAGGCTGCCCATTGTaGAGCCAGTGCAGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRGCPL*SQCSVG
Trigger: ACCAACGCTGCACTGGCTGCACAATGGGCAGCCTCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGACTCCCGCAGAGGCTaGCCATTGTGCAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGDSRRG*PLCSQC
Trigger: GCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTGACTCCCGCAGAGGCTaGCCATTGTGCAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLDSRRG*PLCSQC
Trigger: GCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTC...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCCGTGGTTGATGTGGTaGAGTGGGCTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCPWLMW*SGLAES
Trigger: GGACTCAGCCAGCCCACTGCACCACATCAACCACGG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCCCGTGGTTGATGTGGTaGAGTGGGCTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSPWLMW*SGLAES
Trigger: GGACTCAGCCAGCCCACTGCACCACATCAACCACGG...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp GAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACCATCCACAGGGCACTGGTGGCTCATaGAGTTTCTACTTAGCATCC +
Preference number: 4 (lower is better)
Translates to: EAFAESGWDPDTKNHHPQGTGGS*SFYLAS
Trigger: GGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCC...CTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGATGCAGTAGGAGCTaGAGCAGCCGCCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRCSRS*SSRREW
Trigger: CCATTCGCGGCGGCTGCTGCAGCTCCTACTGCATCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCTCGGTGCACAAAGTaGTGGGAGGCCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSRCTK*WEARYT
Trigger: GGTGTACCTGGCCTCCCAGCACTTTGTGCACCGAGA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGTGGCCAGGTCTCGGTaGACAAAGTGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGVARSR*TKCWEA
Trigger: GGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCAC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTGTGGCCAGGTCTCGGTaGACAAAGTGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLVARSR*TKCWEA
Trigger: GGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCAC...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAGAATCCCTAGAGGATTaGAGAGCCCAGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWAESLED*RAQSRA
Trigger: AGCCCTGCTCTGGGCTCTGCAATCCTCTAGGGATTC...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTTGCTGCTAGCCTCTaGCGCTGCCACACCACACTG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCVAASL*RCHTTL
Trigger: CAGTGTGGTGTGGCAGCGGCAGAGGCTAGCAGCAAC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS-3UTR CCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCCAGGCTCACCACACGTaGGGGATAGTAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAQAHHT*GIVDSE
Trigger: CTCACTGTCTACTATCCCCCACGTGTGGTGAGCCTG...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp CTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCCAGTGCAGCGTTGGTaGGGGGTTGCCACGCACCAC +
Preference number: 4 (lower is better)
Translates to: LFLSFPEDRIQYKHASTSPVQRW*GVATHH
Trigger: GTGGTGCGTGGCAACCCCCCACCAACGCTGCACTGG...AGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGGCCATTGATGGTCTaGTTGGCTGTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVWPLMV*LAVPSG
Trigger: CCCACTGGGCACAGCCAACCAGACCATCAATGGCCA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGGGTGCCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RVPGHWWLMQFLLSIPGSSSSGL*VTVIGG
Trigger: ACCTCCTATCACTGTGACCCACAAACCAGAAGAAGA...GGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGTGGTGCAGTGGGCTaGCTGAGTCCTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCCGAVG*LSPPHH
Trigger: GTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTTGTGGTGCAGTGGGCTaGCTGAGTCCTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPCGAVG*LSPPHH
Trigger: GTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACA...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGATGCCGTGGTTGATGTaGTGCAGTGGGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVMPWLM*CSGLAE
Trigger: CTCAGCCAGCCCACTGCACCACATCAACCACGGCAT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp ATGCTCCCAGTTTCATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCAGCTGACTTCATACAATaGAGGCCCCATGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: MLPVSCSPPLGGQPMLTSADFIQ*RPHGPV
Trigger: CACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGC...TGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCATGAAACTGGGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCTTTGCAGAATCGGGCTaGGATCCTGACACGAAGAAC +
Preference number: 4 (lower is better)
Translates to: TMPRASNLSEGPAYQGDIFAESG*DPDTKN
Trigger: GTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAA...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTCCGGGCAGCCAGGGTaGGATCCTTCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSGQPG*DPSGPS
Trigger: TGAAGGCCCTGAAGGATCCCACCCTGGCTGCCCGGA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVTLGLA*LSIHKD
Trigger: ATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSSPLA*RGCPST
Trigger: TGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSSSPLA*RGCPST
Trigger: TGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCT...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCATCGTACACCTCTTTaGGGCAGACTCGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCHRTPL*GRLGAA
Trigger: AGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTTCAACCGCTGCTGTaGTTCCCTCTGCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCVQPLL*FPLPAP
Trigger: GGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAAC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGCGAATGGGGAGCATaGTGTGTCCTCCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSEWGA*CVLPPH
Trigger: GTGAGGTGGGAGGACACACCATGCTCCCCATTCGCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357724.6
ENST00000360948.6
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAGAATGCCAAGGGGCCTaGCACAGGTGCCAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWAECQGA*HRCQVD
Trigger: ATCTACTTGGCACCTGTGCCAGGCCCCTTGGCATTC...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACATCTCAGGGGCCTTTaGGACAGCTCTCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVHLRGL*DSSLDC
Trigger: GCAGTCCAGAGAGCTGTCCCAAAGGCCCCTGAGATG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTTTTTCCCTGCAGTGCTaGTGGCGTCTATACCAACCC +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVFSLQC*WRLYQP
Trigger: GGGTTGGTATAGACGCCACCAGCACTGCAGGGAAAA...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGGATTGTCAGTCCCATaGAAGCAGGAGGATAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHGLSVP*KQEDRS
Trigger: GCTTCTATCCTCCTGCTTCCATGGGACTGACAATCC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp GAACACCTGTTCTTAGCTACCCAGATCAAAGCCAGATaGTGCAGCTTCAGCCAGAACTCACAGCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: EHLFLATQIKAR*CSFSQNSQPRH
Trigger: ATGCCGGGGCTGTGAGTTCTGGCTGAAGCTGCACAATCTGGCTTTGATCTGGGTAGCTAAGAACAGGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCGGCCGCCGGCAATTaGTCTCAGTCTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPAAGN*SQSCCR
Trigger: TCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CTCCACCTCTGCTTAGGTGCTCTCTGTGACTCTTCCCCACTGGAGGTTGCAGGGGGAAGTGATATTCCTTaGGATGTCCGTGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: LHLCLGALCDSSPLEVAGGSDIP*DVRDVD
Trigger: ATCAACATCACGGACATCTCAAGGAATATCACTTCC...CCCTGCAACCTCCAGTGGGGAAGAGTCACAGAGAGCACCTAAGCAGAGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACGGCGTTGAGCGTGTaGAGACTGCGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTALSV*RLRQFS
Trigger: AGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCAAAGGCTCTGGGCTaGATGCTCCGAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCAKALG*MLRSPE
Trigger: CTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTGGTGAGCCGGTTACTTaGCAGGTTTATATAACGCAA +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPGEPVT*QVYITQ
Trigger: TTGCGTTATATAAACCTGTCAAGTAACCGGCTCACC...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCATRVW*AGYLTG
Trigger: ACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGAGAGGTTCTGGCTGTTaGGCTTGGCCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLFLSFPEDRIQYKHASTRGSGC*AWPPPA
Trigger: AGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCT...CGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGAGGTTCTGGCTGTTaGGCTTGGCCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRGSGC*AWPPPA
Trigger: AGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTGGGAGCCATCAGCGTTaGTGCAGTAGAGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPGSHQR*CSRGSG
Trigger: GCCAGAACCTCTACTGCATCAACGCTGATGGCTCCC...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGAGCCATCAGCGTTaGTGCAGTAGAGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGSHQR*CSRGSG
Trigger: GCCAGAACCTCTACTGCATCAACGCTGATGGCTCCC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCATCAGGAAGGTCACACTaGCTGATGTTCATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPSGRSH*LMFMRK
Trigger: CTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGA...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAHIRKG*SRAIAS
Trigger: ACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTG...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGGACTGCAGCCCAGTaGCTATCCAGTCCACATCAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVWTAAQ*LSSPHQ
Trigger: CTGATGTGGACTGGATAGTCACTGGGCTGCAGTCCA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVQCTSG*SHCPHS
Trigger: CGAGTGAGGACAATGGCTTCACCCTGACGTGCATTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHSIPHG*SWTPAE
Trigger: CTCTGCGGGAGTCCAAGATCATCCATGTGGAATACT...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFGPGIQ*RGRGDA
Trigger: GGCATCACCACGCCCTCGTCACTGGATGCCGGGCCC...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp CTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTTGCGAGTCATGCCAATaGCCACAGTGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LFLSFPEDRIQYKHASTSCESCQ*PQCRAR
Trigger: CCGGGCCCGACACTGTGGTCATTGGCATGACTCGCA...AGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACTGGGGGTTCTCAATaGCAGGGATGCGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVTGGSQ*QGCESC
Trigger: GCATGACTCGCATCCCTGTCATTGAGAACCCCCAGT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTTGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGTCCTTGGTCGGGCTaGGGTTGTAGCACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGCPWSG*GCSTRP
Trigger: TGGCCGAGTGCTACAACCTCAGCCCGACCAAGGACA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTGTCCTTGGTCGGGCTaGGGTTGTAGCACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: SLFLSFPEDRIQYKHASTCPWSG*GCSTRP
Trigger: TGGCCGAGTGCTACAACCTCAGCCCGACCAAGGACA...CGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTGGAGGCAACAGAGTATaGATTCATGACCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVGGNRV*IHDHQP
Trigger: TGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCC...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTCACATGTGCCTGTGGTaGGCTTCCGGGGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAHMCLW*ASGVTD
Trigger: GTCTGTTACCCCGGAAGCTCACCACAGGCACATGTG...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATCTAAGGACACTCAAGTaGCAATCTAGCAGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHLRTLK*QSSRLA
Trigger: AGCAAGCCTGCTAGATTGTCACTTGAGTGTCCTTAG...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGCTGCAGACACAATTTaGAGGGCAAGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVAADTI*RASQHG
Trigger: TCCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCLFPES*PSRRGK
Trigger: CTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCTACTGGCGTTCCCATTaGTGTTCCCTGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAYWRSH*CSLNPA
Trigger: GGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTA...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAGTTGAAAATGGGGAGGCTCTGGGCTGAATaGTCCGAAGTCCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RRESHPLPSPQWIKLKMGRLWAE*SEVLSS
Trigger: AGAACTCAGGACTTCGGAGCATTCAGCCCAGAGCCT...CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGCAGTTGAAAAAGTTCTaGTCCAACTGCAATTCCCGA +
Preference number: 4 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGQLKKF*SNCNSR
Trigger: TCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTG...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGCTCCTGCCAGAGCTaGATCCAGCGGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCCSCQS*IQRMSQ
Trigger: CTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVAHHVL*NARQGE
Trigger: TTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCACCACAAACTCGATaGAGTGCTCCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCAPQTR*SAPGAA
Trigger: AGCTGCGCCTGGAGCACTGCATCGAGTTTGTGGTGC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGAGGCTGCCCATTGTaGAGCCAGTGCAGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRGCPL*SQCSVG
Trigger: ACCAACGCTGCACTGGCTGCACAATGGGCAGCCTCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAGAGGCTGCCCATTGTaGAGCCAGTGCAGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTRGCPL*SQCSVG
Trigger: ACCAACGCTGCACTGGCTGCACAATGGGCAGCCTCT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCGTGGTTGATGTGGTaGAGTGGGCTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPWLMW*SGLAES
Trigger: GGACTCAGCCAGCCCACTGCACCACATCAACCACGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGGCTTATTGGATTCAACATAATTTCTCTGAAACACGTGTCCGGCTTGTGGCAGGGGAAGGGGCAACCCTaGCAGTGGTGGATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: RLIGFNIISLKHVSGLWQGKGQP*QWWMGE
Trigger: TTCCCCCATCCACCACTGGCAGGGTTGCCCCTTCCC...CTGCCACAAGCCGGACACGTGTTTCAGAGAAATTATGTTGAATCCAATAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR GCA 90 bp GGAGCTGGGAGCCAGAAGTCTACTCCACCAATGAGTCAGCAAATACGGGAGAGTAAAGCTTGTCGGAACTaGAGATCTAAGGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GAGSQKSTPPMSQQIRESKACRN*RSKGPG
Trigger: TCCTGGGCCCTTAGATCTGCAGTTCCGACAAGCTTT...ACTCTCCCGTATTTGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTCCCCATGGAGGCATTTaGAGAATCGGGCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPPHGGI*RIGLGS
Trigger: GGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGG...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTAGATGCAGTAGGAGCTaGAGCAGCCGCCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVRCSRS*SSRREW
Trigger: CCATTCGCGGCGGCTGCTGCAGCTCCTACTGCATCT...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGCTGTGGTTCCCTCTaGCAGCACCCCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCCCGSL*QHPSMT
Trigger: TGTCATGCTGGGGTGCTGGCAGAGGGAACCACAGCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCTGCTGTGGTTCCCTCTaGCAGCACCCCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTCCGSL*QHPSMT
Trigger: TGTCATGCTGGGGTGCTGGCAGAGGGAACCACAGCA...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTGGCTCGCCGCGCGGCTaGAGAAATGTACAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTGSPRG*RNVQVL
Trigger: GAGCACTTGTACATTTCTGCAGCCGCGCGGCGAGCC...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACCAAGCTTGGTTGATGTaGAGGCTAGGAAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHQAWLM*RLGKRE
Trigger: CTCCCTCTTTCCTAGCCTGCACATCAACCAAGCTTG...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATACTGCTGTGAAACATTaGCTCCAGATGCACACTGAG +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHTAVKH*LQMHTE
Trigger: CTCAGTGTGCATCTGGAGGCAATGTTTCACAGCAGT...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TTAGGTGGGCAGCCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTGGGAAACTACACTTGGCTaGGCAAAGAGAGACATCCAT +
Preference number: 4 (lower is better)
Translates to: LGGQPMLTSYNGGPMGQWETTLG*AKRDIH
Trigger: ATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTC...CCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCACCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTGAAACTACACTTGGCTaGGCAAAGAGAGACATCCAT +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPETTLG*AKRDIH
Trigger: ATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTC...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATCTTGGCAAAGGCTCTaGGCTGAATGCTCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWASWQRL*AECSEV
Trigger: GACTTCGGAGCATTCAGCCCAGAGCCTTTGCCAAGA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRRLSV*KSCHES
Trigger: ACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAACGGTCAGGTTGACGTaGCTCACGCTGATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVTVRLT*LTLISG
Trigger: TCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACGGTCAGGTTGACGTaGCTCACGCTGATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVTVRLT*LTLISG
Trigger: TCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCAGTGCAGCGTTGGTaGGGGGTTGCCACGCACCAC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPVQRW*GVATHH
Trigger: GTGGTGCGTGGCAACCCCCCACCAACGCTGCACTGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGGCCATTGATGGTCTaGTTGGCTGTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCWPLMV*LAVPSG
Trigger: CCCACTGGGCACAGCCAACCAGACCATCAATGGCCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TGTGGTCCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTGGCTCCTTGAGGAAGTaGCCATTGATGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: CGPSRMASSWVKPPAAKAGSLRK*PLMVWL
Trigger: CAACCAGACCATCAATGGCCACTTCCTCAAGGAGCC...AGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AGGGTGCCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCCAAGTCCAACTGCTATaGATACCCCAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RVPGHWWLMQFLLSIPGSQVQLL*IPQKCL
Trigger: AAGACACTTTTGGGGTATCCATAGCAGTTGGACTTG...GGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGTGGTGCAGTGGGCTaGCTGAGTCCTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGCGAVG*LSPPHH
Trigger: GTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTATGCCGTGGTTGATGTaGTGCAGTGGGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPMPWLM*CSGLAE
Trigger: CTCAGCCAGCCCACTGCACCACATCAACCACGGCAT...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTATGCCGTGGTTGATGTaGTGCAGTGGGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCMPWLM*CSGLAE
Trigger: CTCAGCCAGCCCACTGCACCACATCAACCACGGCAT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGCGTGGTGATGCCGTaGTTGATGTGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGVVMP*LMWCSG
Trigger: CCCACTGCACCACATCAACCACGGCATCACCACGCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp ATGCTCCCAGTTTCATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCATGCCATGAGAGGGGCTaGAGGAGGCCAAGTTTTACT +
Preference number: 4 (lower is better)
Translates to: MLPVSCSPPLGGQPMLTSCHERG*RRPSFT
Trigger: AGTAAAACTTGGCCTCCTCCAGCCCCTCTCATGGCA...TGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCATGAAACTGGGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACATTGCATCTGGCCCATaGGCCCTGAGGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHIASGP*ALRNLF
Trigger: GAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAAT...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCAATTGCATCTGGCCCATaGGCCCTGAGGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPIASGP*ALRNLF
Trigger: GAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAAT...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTLGLA*LSIHKD
Trigger: ATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: SLFLSFPEDRIQYKHASTSSPLA*RGCPST
Trigger: TGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCT...CGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSSPLA*RGCPST
Trigger: TGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCGAGGCGATCTGACTaGCAATGTGGAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPRRSD*QCGAFG
Trigger: CCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCGGTGCACAAAGTGCTaGGAGGCCAGGTACACCATA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRCTKC*EARYTI
Trigger: TATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACGGTGCACAAAGTGCTaGGAGGCCAGGTACACCATA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVRCTKC*EARYTI
Trigger: TATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCATCGTACACCTCTTTaGGGCAGACTCGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGHRTPL*GRLGAA
Trigger: AGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGTTCAACCGCTGCTGTaGTTCCCTCTGCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGVQPLL*FPLPAP
Trigger: GGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAAC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCAGGTAGATTGGGGTaGCCTTCCCCAAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPGRLG*PSPKHG
Trigger: TCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGCGAATGGGGAGCATaGTGTGTCCTCCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSEWGA*CVLPPH
Trigger: GTGAGGTGGGAGGACACACCATGCTCCCCATTCGCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357724.6
ENST00000360948.6
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTGATTGTCTCTCTGCATaGTCCAGGTCTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVDCLSA*SRSSAP
Trigger: TGGAGCAGAAGACCTGGACCATGCAGAGAGACAATC...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCCCCACTGTGGTATGTaGCAGCAGCCAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTPHCGM*QQPGRQ
Trigger: CTGCCTTCCTGGCTGCTGCCACATACCACAGTGGGG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACCAGCCTGGGTGCCCTaGAGCGTTCATCAAAAGACA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVPAWVP*SVHQKT
Trigger: TGTCTTTTGATGAACGCTCCAGGGCACCCAGGCTGG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTCTGGCTTGTCTGCCTaGCTCCCTGTACAATATTCC +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHSGLSA*LPVQYS
Trigger: GGAATATTGTACAGGGAGCCAGGCAGACAAGCCAGA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACCGGCTCCTCTGCTCCTaGAGGCTAAAAGTTTATGGA +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHRLLCS*RLKVYG
Trigger: TCCATAAACTTTTAGCCTCCAGGAGCAGAGGAGCCG...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCACCTGGCTCAGCATCATaGTCAGAGAAGGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWAPGSAS*SEKAQT
Trigger: AGTTTGGGCCTTCTCTGACCATGATGCTGAGCCAGG...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTAAACAGATGCACCATTaGGGTCTACAGTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVKQMHH*GLQSPP
Trigger: AGGTGGGGACTGTAGACCCCAATGGTGCATCTGTTT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGACGGCGTTGAGCGTGTaGAGACTGCGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGTALSV*RLRQFS
Trigger: AGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPCPRR*ACEDCA
Trigger: GGCGCAGTCTTCACACGCTCAACGCCGTGGACATGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCAAAGGCTCTGGGCTaGATGCTCCGAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGAKALG*MLRSPE
Trigger: CTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGATRVW*AGYLTG
Trigger: ACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: SSPFPRTESNISMLQRLRATRVW*AGYLTG
Trigger: ACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGC...TCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGGAGCCATCAGCGTTaGTGCAGTAGAGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGSHQR*CSRGSG
Trigger: GCCAGAACCTCTACTGCATCAACGCTGATGGCTCCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTGGGAGCCATCAGCGTTaGTGCAGTAGAGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AFSSPFPRTESNISMLQRGSHQR*CSRGSG
Trigger: GCCAGAACCTCTACTGCATCAACGCTGATGGCTCCC...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVHIRKG*SRAIAS
Trigger: ACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACGTCAAGTTGATGGCATaGACATTGGTCCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDVKLMA*TLVQFR
Trigger: TCTGAACTGGACCAATGTTCATGCCATCAACTTGAC...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCQCTSG*SHCPHS
Trigger: CGAGTGAGGACAATGGCTTCACCCTGACGTGCATTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGGATAGTAGACAGTaGGGGCAACACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGDSRQ*GQHWHC
Trigger: GCAATGCCAGTGTTGCCCTCACTGTCTACTATCCCC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TGTGGTCCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: CGPSRMASSWVKPPAAKASIPHG*SWTPAE
Trigger: CTCTGCGGGAGTCCAAGATCATCCATGTGGAATACT...AGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CTGGTGCACAGGTTTTTAATTCTCTTTATTGGCTCTAAAGATAGTGGCAGGAGCTGCGAGTCATGCCAATaGCCACAGTGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LVHRFLILFIGSKDSGRSCESCQ*PQCRAR
Trigger: CCGGGCCCGACACTGTGGTCATTGGCATGACTCGCA...GCTCCTGCCACTATCTTTAGAGCCAATAAAGAGAATTAAAAACCTGTGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGCGAGTCATGCCAATaGCCACAGTGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECESCQ*PQCRAR
Trigger: CCGGGCCCGACACTGTGGTCATTGGCATGACTCGCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACTGGGGGTTCTCAATaGCAGGGATGCGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTGGSQ*QGCESC
Trigger: GCATGACTCGCATCCCTGTCATTGAGAACCCCCAGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTTGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: AFSSPFPRTESNISMLQRWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGCATCAGGCTTTCTTGTaGTGGTTAGGTTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRHQAFL*WLGCFC
Trigger: ACAAAAACAACCTAACCATCACAAGAAAGCCTGATG...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTTGTCGGATGTCACACTCATTGTaGGCCGTTCCAGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSRMASSWVKPPAAKACRMSHSL*AVPERR
Trigger: TCTTCTCTCTGGAACGGCTCACAATGAGTGTGACAT...CCGACAAGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AGGGTGCCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCTTGACCTTGAAATGCTaGTTCCATTGGGTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RVPGHWWLMQFLLSIPGSLTLKC*FHWVPK
Trigger: TTTTGGAACCCAATGGAATCAGCATTTCAAGGTCAA...GGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAAATCCTTCAGCGTCTaGAACCATCGCGGACGCCGC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGKSFSV*NHRGRR
Trigger: GCGGCGTCCGCGATGGTTTCAGACGCTGAAGGATTT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCGATCGCTGCTTCTTTaGAACGCCGAGCGATCAGAT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRSLLL*NAERSD
Trigger: ATCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGATACCCGAGGCGATCTaGCTGGCAATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVIPEAI*LAMWSI
Trigger: AATGCTCCACATTGCCAGTCAGATCGCCTCGGGTAT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTAGCAAAGGAGTTCCTTaGGGTGGTCAATCCAAACAG +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVSKGVP*GGQSKQ
Trigger: CTGTTTGGATTGACCACCTCAAGGAACTCCTTTGCT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACGACACAGTAAGAACATaGCCCCAAGATCAGCGTGAA +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHDTVRT*PQDQRE
Trigger: TTCACGCTGATCTTGGGGTCATGTTCTTACTGTGTC...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGGAAGGTTGACTAGCTaGGGGGAACAGCCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLGRLTS*GEQPGE
Trigger: TTCACCAGGCTGTTCCCCTCAGCTAGTCAACCTTCC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCGCCTGCAACCATGCTaGGCAACTCTGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRLQPC*ATLWSL
Trigger: CAGACTCCACAGAGTTGCTCAGCATGGTTGCAGGCG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGTATGGGGCCGAGACTaGAGGACATGCACAATGGGA +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLVWGRD*RTCTMG
Trigger: TCCCATTGTGCATGTCCTTCAGTCTCGGCCCCATAC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTACTCTAAGAAATCTATaGCCCATCCCCCTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPTLRNL*PIPLLV
Trigger: TACTAAGAGGGGGATGGGTCATAGATTTCTTAGAGT...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGCTGCCACACCACACTaGACGGGCCCTTCTGGCATG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEAATPH*TGPSGM
Trigger: CATGCCAGAAGGGCCCGTTCAGTGTGGTGTGGCAGC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCTGCAGACACAATTTaGAGGGCAAGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCAADTI*RASQHG
Trigger: TCCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGLFPES*PSRRGK
Trigger: CTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTACTGGCGTTCCCATTaGTGTTCCCTGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVYWRSH*CSLNPA
Trigger: GGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGGCTCTGGGCTGAATaGTCCGAAGTCCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRLWAE*SEVLSS
Trigger: AGAACTCAGGACTTCGGAGCATTCAGCCCAGAGCCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAAGGCTCTGGGCTGAATaGTCCGAAGTCCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVRLWAE*SEVLSS
Trigger: AGAACTCAGGACTTCGGAGCATTCAGCCCAGAGCCT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGCTCCTGCCAGAGCTaGATCCAGCGGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGCSCQS*IQRMSQ
Trigger: CTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSAHHVL*NARQGE
Trigger: TTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGC...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCACTGGCATTGCTCATaGCCACCACGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVHWHCS*PPRSLQ
Trigger: TTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGCAACACTGGCATTaGTCATGCCCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGQHWH*SCPPRS
Trigger: AGAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGGGCAACACTGGCATTaGTCATGCCCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLGQHWH*SCPPRS
Trigger: AGAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCACCACAAACTCGATaGAGTGCTCCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGAPQTR*SAPGAA
Trigger: AGCTGCGCCTGGAGCACTGCATCGAGTTTGTGGTGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGACTCCCGCAGAGGCTaGCCATTGTGCAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEDSRRG*PLCSQC
Trigger: GCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAGCAGCAAGTCCAACTaGTATGGATACCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PGHWWLMQFLLSIPGSKESSKSN*YGYPKS
Trigger: ACTTTTGGGGTATCCATAGCAGTTGGACTTGCTGCT...CTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp CAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGATGGGTAAAACCTCCTaGAGCCAAAGCTTGTCGGAA +
Preference number: 4 (lower is better)
Translates to: QREQCLELPTSQRAQPTKMGKTS*SQSLSE
Trigger: TTCCGACAAGCTTTGGCTGCAGGAGGTTTTACCCAT...CTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGATCCACAAGGATCATTaGATCTGGCCCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVIHKDH*IWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGAT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTGGCCAGGTCTCGGTaGACAAAGTGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVARSR*TKCWEA
Trigger: GGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATGTGGCCAGGTCTCGGTaGACAAAGTGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNVARSR*TKCWEA
Trigger: GGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCAC...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGCTGTGGTTCCCTCTaGCAGCACCCCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGCCGSL*QHPSMT
Trigger: TGTCATGCTGGGGTGCTGGCAGAGGGAACCACAGCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTTACCCTTCCCTGCTCTaGCCCTCTCTCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTYPSLL*PSLSGT
Trigger: AGTGCCAGAGAGAGAGGGGCAGAGCAGGGAAGGGTA...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCTTGGCAAAGGCTCTaGGCTGAATGCTCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSWQRL*AECSEV
Trigger: GACTTCGGAGCATTCAGCCCAGAGCCTTTGCCAAGA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTCGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGT +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPRRLSV*KSCHES
Trigger: ACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCG...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRRLSV*KSCHES
Trigger: ACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCAGGCTCACCACACGTaGGGGATAGTAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCQAHHT*GIVDSE
Trigger: CTCACTGTCTACTATCCCCCACGTGTGGTGAGCCTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATCCAGTGCAGCGTTGGTaGGGGGTTGCCACGCACCAC +
Preference number: 4 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYPVQRW*GVATHH
Trigger: GTGGTGCGTGGCAACCCCCCACCAACGCTGCACTGG...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGGCCATTGATGGTCTaGTTGGCTGTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGWPLMV*LAVPSG
Trigger: CCCACTGGGCACAGCCAACCAGACCATCAATGGCCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGATGGCCATTGATGGTCTaGTTGGCTGTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPFPRTESNISMLQRLRWPLMV*LAVPSG
Trigger: CCCACTGGGCACAGCCAACCAGACCATCAATGGCCA...TCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGCTCCTTGAGGAAGTaGCCATTGATGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGSLRK*PLMVWL
Trigger: CAACCAGACCATCAATGGCCACTTCCTCAAGGAGCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCATGTGGTGCAGTGGGCTaGCTGAGTCCTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASCGAVG*LSPPHH
Trigger: GTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACA...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGTGGTGCAGTGGGCTaGCTGAGTCCTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRCGAVG*LSPPHH
Trigger: GTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACA...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGATGCCGTGGTTGATGTaGTGCAGTGGGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGMPWLM*CSGLAE
Trigger: CTCAGCCAGCCCACTGCACCACATCAACCACGGCAT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTCAACCCTGCCAGTGGTaGATGGGGGAAAACACCCAT +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPQPCQW*MGENTH
Trigger: ATGGGTGTTTTCCCCCATCCACCACTGGCAGGGTTG...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp CAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGCTTCCCTCTCCTCAGTaGATCAAGTTGAAAATGGGG +
Preference number: 4 (lower is better)
Translates to: QREQCLELPTSQRAQPTKLPSPQ*IKLKMG
Trigger: CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAG...CTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATATGGGCCAGTGGAGCTaGGAGCCAGAAGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: HWWLMQFLLSIPGSKENNMGQWS*EPEVYS
Trigger: GGAGTAGACTTCTGGCTCCCAGCTCCACTGGCCCAT...ATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCGGGTCCGGGGGCTCTaGAAGCGAGGCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPARVRGL*KRGALS
Trigger: GGAGAGCGCGCCTCGCTTCCAGAGCCCCCGGACCCG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCCGGGCAGCCAGGGTaGGATCCTTCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESGQPG*DPSGPS
Trigger: TGAAGGCCCTGAAGGATCCCACCCTGGCTGCCCGGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGCTCGGCCTCCCTCTaGAAATCCTTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESSASL*KSFRAA
Trigger: GGCTGCCCGGAAGGATTTCCAGAGGGAGGCCGAGCT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGTLGLA*LSIHKD
Trigger: ATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVTLGLA*LSIHKD
Trigger: ATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGT...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCCCGAGGCGATCTGACTaGCAATGTGGAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSPRRSD*QCGAFG
Trigger: CCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGG...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCCGAGGCGATCTGACTaGCAATGTGGAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCPRRSD*QCGAFG
Trigger: CCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCGGTGCACAAAGTGCTaGGAGGCCAGGTACACCATA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRCTKC*EARYTI
Trigger: TATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATTCCAAAACACGACCTTaGGTAATGCACTCAATGACC +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHSKTRP*VMHSMT
Trigger: GGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGA...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAATGTCCAGGTAGATTaGGGTGGCCTTCCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVNVQVD*GGLPQS
Trigger: GCTTTGGGGAAGGCCACCCCAATCTACCTGGACATT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTGGCAATGCATTCATATaGAAGAGATGCCAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPGNAFI*KRCQRD
Trigger: ATCTCTCTGGCATCTCTTCCATATGAATGCATTGCC...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCACATACCTGGGAATACTaGATAGGACAGGTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPHTWEY*IGQVAS
Trigger: ACTAGCCACCTGTCCTATCCAGTATTCCCAGGTATG...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCGGGCCCTTCTGGCATaGCCCTTCCCTGTAATAATC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRALLA*PFPVII
Trigger: GATTATTACAGGGAAGGGCCATGCCAGAAGGGCCCG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
3UTR CAA 72 bp TTAACTCCTCCCGTCCCAGAGCTCTCATCCCAAAGATaGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LTPPVPELSSQR*SLCMVQVFCSK
Trigger: TTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGATGAGAGCTCTGGGACGGGAGGAGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp AGCCCCAGAAGCTGGCTGACAGCTCTCCCGTTGGTGTaGGTTTCTGCAGTATTTAGCACCAAAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: SPRSWLTALPLV*VSAVFSTKMTC
Trigger: GCAAGTCATTTTGGTGCTAAATACTGCAGAAACCAACACCAACGGGAGAGCTGTCAGCCAGCTTCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp AGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTaGTTGCAATGGGATCTTGAATCCCTAGAGGATTGC +
Preference number: 4 (lower is better)
Translates to: RIRLSGLDAVMT*LQWDLESLEDC
Trigger: GCAATCCTCTAGGGATTCAAGATCCCATTGCAACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTGGTGCACAGGTTTTTAATTCTCTTTATTGGCTCTAAAGATAGTGGCAGGAGCCCGGCCGCCGGCAATTaGTCTCAGTCTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LVHRFLILFIGSKDSGRSPAAGN*SQSCCR
Trigger: TCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGG...GCTCCTGCCACTATCTTTAGAGCCAATAAAGAGAATTAAAAACCTGTGCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCCGGCCGCCGGCAATTaGTCTCAGTCTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTPAAGN*SQSCCR
Trigger: TCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCCTATGTGTATGGAAGTaGTATTCCTTGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: TMPRASNLSEGPAYQGDILCVWK*YSLRCP
Trigger: CGGACATCTCAAGGAATATCACTTCCATACACATAG...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCAATGCTCCGAAGTCCTaGGTTCTTGATGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTANAPKS*VLDGQL
Trigger: AAGCTGACCATCAAGAACTCAGGACTTCGGAGCATT...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAAGCAAAGGCTCTGGGCTaGATGCTCCGAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQAKALG*MLRSPE
Trigger: CTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGC...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGAGGTTCTGGCTGTTaGGCTTGGCCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERGSGC*AWPPPA
Trigger: AGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATAGAGGTTCTGGCTGTTaGGCTTGGCCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNRGSGC*AWPPPA
Trigger: AGCAGGGGGAGGCCAAGCTCAACAGCCAGAACCTCT...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGAGGGAGCCATCAGCGTTaGTGCAGTAGAGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRGSHQR*CSRGSG
Trigger: GCCAGAACCTCTACTGCATCAACGCTGATGGCTCCC...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGAAGGTCACACTGACTaGTGTTCATGCGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVEGHTD*CSCGRE
Trigger: CTCTCTTCCGCATGAACATCAGTCAGTGTGACCTTC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCAGGAAGGTCACACTaGCTGATGTTCATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSGRSH*LMFMRK
Trigger: CTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCHIRKG*SRAIAS
Trigger: ACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGGACTGCAGCCCAGTaGCTATCCAGTCCACATCAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGWTAAQ*LSSPHQ
Trigger: CTGATGTGGACTGGATAGTCACTGGGCTGCAGTCCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTTCAGATTGGTCTGGTaGGTGTTGATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVFRLVW*VLMDCS
Trigger: GCTGCAGTCCATCAACACTCACCAGACCAATCTGAA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCACCAGCGTCAAGTTaGTGGCATGAACATTGGTCC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSPASS*WHEHWS
Trigger: GGACCAATGTTCATGCCATCAACTTGACGCTGGTGA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGQCTSG*SHCPHS
Trigger: CGAGTGAGGACAATGGCTTCACCCTGACGTGCATTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGGGATAGTAGACAGTaGGGGCAACACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGDSRQ*GQHWHC
Trigger: GCAATGCCAGTGTTGCCCTCACTGTCTACTATCCCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSIPHG*SWTPAE
Trigger: CTCTGCGGGAGTCCAAGATCATCCATGTGGAATACT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGACTGGGGGTTCTCAATaGCAGGGATGCGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGTGGSQ*QGCESC
Trigger: GCATGACTCGCATCCCTGTCATTGAGAACCCCCAGT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CTATACACTGAACACTCCTATAAGTCTCTGTGGAAACACAACGCCCCATTGTCATGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LYTEHSYKSLWKHNAPLSWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...TGACAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGAGTGTTCAGTGTATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AACCCCATGGAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACAGTAAACACACATATTaGCCAGAGAACAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: NPMEAFAESGWDPDTKNHSKHTY*PENRRT
Trigger: TGTCCTCCTGTTCTCTGGTCAATATGTGTGTTTACT...GTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp CTATACACTGAACACTCCTATAAGTCTCTGTGGAAACACAACGCCCCATTGTCACAATGGGGAACAGCCTaGCATGGAGCAATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LYTEHSYKSLWKHNAPLSQWGTA*HGAMGS
Trigger: GCTCCCCATTGCTCCATGTCAGGCTGTTCCCCATTG...TGACAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGAGTGTTCAGTGTATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCGATCGCTGCTTCTTTaGAACGCCGAGCGATCAGAT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRSLLL*NAERSD
Trigger: ATCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGTCCTTGGTCGGGCTaGGGTTGTAGCACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECPWSG*GCSTRP
Trigger: TGGCCGAGTGCTACAACCTCAGCCCGACCAAGGACA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATTGTCCTTGGTCGGGCTaGGGTTGTAGCACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNCPWSG*GCSTRP
Trigger: TGGCCGAGTGCTACAACCTCAGCCCGACCAAGGACA...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTATACCCGAGGCGATCTaGCTGGCAATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCIPEAI*LAMWSI
Trigger: AATGCTCCACATTGCCAGTCAGATCGCCTCGGGTAT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTTTTGTAGATCTCCTTaGTGTTCAACCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHFCRSP*CSTAAV
Trigger: CACAGCAGCGGTTGAACATCAAGGAGATCTACAAAA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACAGAGTATGAATTCATaGCCACCAGCCACCACTAGC +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVQSMNS*PPATTS
Trigger: GCTAGTGGTGGCTGGTGGTCATGAATTCATACTCTG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCAGAGTATGAATTCATaGCCACCAGCCACCACTAGC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVQSMNS*PPATTS
Trigger: GCTAGTGGTGGCTGGTGGTCATGAATTCATACTCTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCCAGCCCACAAAAGTaGTTTCTCAGCCCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPSPQK*FLSPCV
Trigger: AACGCAGGGGCTGAGAAATCACTTTTGTGGGCTGGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTGCTAACCAGCCTCGTTaGTCCCAAATCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAANQPR*SQIPTM
Trigger: CATGGTTGGGATTTGGGATCAACGAGGCTGGTTAGC...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTAGGAGCACAGCACAGTaGGAAAACCAACACCAAATT +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVRSTAQ*ENQHQI
Trigger: AATTTGGTGTTGGTTTTCTCACTGTGCTGTGCTCCT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACAGGAGAGGATCCGGTaGGGTTGGCATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILQERIR*GWHGRE
Trigger: CTCTCTGCCATGCCAACCTCACCGGATCCTCTCCTG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCTCTCCCGGCATGGCTaGCTCACTTCTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTLSRHG*LTSTSE
Trigger: CTCAGAAGTAGAAGTGAGTCAGCCATGCCGGGAGAG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAAGTGGCTAGGCCAGTaGCCTCCTGTGAAGAGCATA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCKWLGQ*PPVKSI
Trigger: TATGCTCTTCACAGGAGGTCACTGGCCTAGCCACTT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGGCAACCAGGAAGAATaGTTTTCAGATGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHGNQEE*FSDAQN
Trigger: ATTCTGAGCATCTGAAAATCATTCTTCCTGGTTGCC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCATCCCCTGCAAGCTATaGATGTGGGTCACGACACTG +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTIPCKL*MWVTTL
Trigger: CAGTGTCGTGACCCACATTCATAGCTTGCAGGGGAT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATCAGATACACTGCAAGTaGTTGTTGCTTGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHQIHCK*LLLGDL
Trigger: TAGATCTCCAAGCAACAATCACTTGCAGTGTATCTG...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTATCTGTTTTAACGTCTaGGTGATCTCATTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPICFNV*VISFRP
Trigger: TGGCCTAAATGAGATCACTCAGACGTTAAAACAGAT...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGCTGCAGACACAATTTaGAGGGCAAGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: YLASLDPKRTMPRASNLSAADTI*RASQHG
Trigger: TCCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGC...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCTGCAGACACAATTTaGAGGGCAAGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGAADTI*RASQHG
Trigger: TCCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTACTGGCGTTCCCATTaGTGTTCCCTGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCYWRSH*CSLNPA
Trigger: GGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGGCTCTGGGCTGAATaGTCCGAAGTCCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRLWAE*SEVLSS
Trigger: AGAACTCAGGACTTCGGAGCATTCAGCCCAGAGCCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: YLASLDPKRTMPRASNLSAHHVL*NARQGE
Trigger: TTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGC...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGAHHVL*NARQGE
Trigger: TTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCACTGGCATTGCTCATaGCCACCACGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCHWHCS*PPRSLQ
Trigger: TTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGACTCCCGCAGAGGCTaGCCATTGTGCAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFDSRRG*PLCSQC
Trigger: GCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGGTCTGGTTGGCTGTaGCCAGTGGGTTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCWSGWL*PVGFWQ
Trigger: TTGCCAAAAACCCACTGGGCACAGCCAACCAGACCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CTGGTGCACAGGTTTTTAATTCTCTTTATTGGCTCTAAAGATAGTGGCAGGAGCCCGTGGTTGATGTGGTaGAGTGGGCTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LVHRFLILFIGSKDSGRSPWLMW*SGLAES
Trigger: GGACTCAGCCAGCCCACTGCACCACATCAACCACGG...GCTCCTGCCACTATCTTTAGAGCCAATAAAGAGAATTAAAAACCTGTGCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATCCGTGGTTGATGTGGTaGAGTGGGCTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNPWLMW*SGLAES
Trigger: GGACTCAGCCAGCCCACTGCACCACATCAACCACGG...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGATAGTGGCAGGAGCTaGCTCGTAGGCCGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: YLASLDPKRTMPRASNLSDSGRS*LVGREK
Trigger: TTTTTCCCGGCCTACGAGGCAGCTCCTGCCACTATC...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGATGCAGTAGGAGCTaGAGCAGCCGCCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERCSRS*SSRREW
Trigger: CCATTCGCGGCGGCTGCTGCAGCTCCTACTGCATCT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCGCCGAGCGATCAGATaGAAAATCCTTCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRRAIR*KILQRL
Trigger: CAGACGCTGAAGGATTTTGCATCTGATCGCTCGGCG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTTGACAATGTGCTCATaGTGCAGGTTGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVLTMCS*CRLVSS
Trigger: GCTGCTCACCAACCTGCAGCATGAGCACATTGTCAA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTATCCACAAGGATCATTaGATCTGGCCCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCIHKDH*IWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGAT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCATCTCGGTGCACAAAGTaGTGGGAGGCCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISSRCTK*WEARYT
Trigger: GGTGTACCTGGCCTCCCAGCACTTTGTGCACCGAGA...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCATCTCGGTGCACAAAGTaGTGGGAGGCCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASSRCTK*WEARYT
Trigger: GGTGTACCTGGCCTCCCAGCACTTTGTGCACCGAGA...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATCTCGGTGCACAAAGTaGTGGGAGGCCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRSRCTK*WEARYT
Trigger: GGTGTACCTGGCCTCCCAGCACTTTGTGCACCGAGA...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp GAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGGTGGCCAGGTCTCGGTaGACAAAGTGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: EDRIQYKHASTSQNFLMGVARSR*TKCWEA
Trigger: GGCCTCCCAGCACTTTGTGCACCGAGACCTGGCCAC...CCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCACCCTGTAATAATCCGTaGTGTAGACATCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPPCNNP*CRHLWT
Trigger: TGTCCAGAGATGTCTACAGCACGGATTATTACAGGG...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGGGAAGCCGACCAAATaGTCCCCTCCTGGCTTACAG +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISGKPTK*SPPGLQ
Trigger: CTGTAAGCCAGGAGGGGAGCATTTGGTCGGCTTCCC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTTTTCCCATGTACAAATaGTGGTCCTGGCATGAACAG +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVFPMYK*WSWHEQ
Trigger: CTGTTCATGCCAGGACCAGCATTTGTACATGGGAAA...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAACACCCAGGCTTCGCTaGAGAATTTACACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVTPRLR*RIYTLG
Trigger: TCCCAGAGTGTAAATTCTGCAGCGAAGCCTGGGTGT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCAGTATCAGTCCTCATaGCTGCACAACCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: AFSSPFPRTESNISMLQRQYQSS*LHNLSG
Trigger: CCCGGACAGGTTGTGCAGGCATGAGGACTGATACTG...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558576.5
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCTTGGCAAAGGCTCTaGGCTGAATGCTCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSWQRL*AECSEV
Trigger: GACTTCGGAGCATTCAGCCCAGAGCCTTTGCCAAGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGCGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGT +
Preference number: 4 (lower is better)
Translates to: FLSFPEDRIQYKHASTSQRRLSV*KSCHES
Trigger: ACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCG...CTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRRLSV*KSCHES
Trigger: ACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGACGGTCAGGTTGACGTaGCTCACGCTGATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGTVRLT*LTLISG
Trigger: TCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAACGGTCAGGTTGACGTaGCTCACGCTGATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SSPFPRTESNISMLQRLRTVRLT*LTLISG
Trigger: TCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGT...TCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAGGCTCACCACACGTaGGGGATAGTAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGQAHHT*GIVDSE
Trigger: CTCACTGTCTACTATCCCCCACGTGTGGTGAGCCTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGCTCCTTGAGGAAGTaGCCATTGATGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGSLRK*PLMVWL
Trigger: CAACCAGACCATCAATGGCCACTTCCTCAAGGAGCC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTTATCCGTGCTCTCTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVVIRAL*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGAGAGCACGGATAAC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360948.6
ENST00000394480.6
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAATGCCGTGGTTGATGTaGTGCAGTGGGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASMPWLM*CSGLAE
Trigger: CTCAGCCAGCCCACTGCACCACATCAACCACGGCAT...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp AGGCTTATTGGATTCAACATAATTTCTCTGAAACACGTGTCCGGCTTGTGGCAGATGCCGTGGTTGATGTaGTGCAGTGGGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RLIGFNIISLKHVSGLWQMPWLM*CSGLAE
Trigger: CTCAGCCAGCCCACTGCACCACATCAACCACGGCAT...CTGCCACAAGCCGGACACGTGTTTCAGAGAAATTATGTTGAATCCAATAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGCGTGGTGATGCCGTaGTTGATGTGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGVVMP*LMWCSG
Trigger: CCCACTGCACCACATCAACCACGGCATCACCACGCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATGGCGTGGTGATGCCGTaGTTGATGTGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNGVVMP*LMWCSG
Trigger: CCCACTGCACCACATCAACCACGGCATCACCACGCC...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGTCCGGGAAGGCTTATTaGATTCAACATAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGSGKAY*IQHNFS
Trigger: AGAGAAATTATGTTGAATCCAATAAGCCTTCCCGGA...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGTGCCGGGGCACTGGTaGCTCATGCAGTTTCTACTT +
Preference number: 4 (lower is better)
Translates to: YLASLDPKRTMPRASNLSVPGHW*LMQFLL
Trigger: AAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCAC...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp AGGCTTATTGGATTCAACATAATTTCTCTGAAACACGTGTCCGGCTTGTGGCAGCCTGCCAGTGGTGGATaGGGGAAAACACCCATCTGG +
Preference number: 4 (lower is better)
Translates to: RLIGFNIISLKHVSGLWQPASGG*GKTPIW
Trigger: CCAGATGGGTGTTTTCCCCCATCCACCACTGGCAGG...CTGCCACAAGCCGGACACGTGTTTCAGAGAAATTATGTTGAATCCAATAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR CCA 90 bp AGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAGTTGAAAATGGGGCAGAATAAAAGATGCTaGGATGGATGGAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RRESHPLPSPQWIKLKMGQNKRC*DGWSLG
Trigger: TCCCAGGCTCCATCCATCCCAGCATCTTTTATTCTG...CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCTCCTATAAGTCTCTGTaGAAACACAACGCCCCATTG +
Preference number: 4 (lower is better)
Translates to: ASLDPKRTMPRASNLSEGSYKSL*KHNAPL
Trigger: CAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGA...GCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCTCCGGGCAGCCAGGGTaGGATCCTTCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVSGQPG*DPSGPS
Trigger: TGAAGGCCCTGAAGGATCCCACCCTGGCTGCCCGGA...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGAGCTCGGCCTCCCTCTaGAAATCCTTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EDRIQYKHASTSQNFLMGSSASL*KSFRAA
Trigger: GGCTGCCCGGAAGGATTTCCAGAGGGAGGCCGAGCT...CCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGATTGCATCTGGCCCATaGGCCCTGAGGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVIASGP*ALRNLF
Trigger: GAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAAT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASTLGLA*LSIHKD
Trigger: ATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGT...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESSPLA*RGCPST
Trigger: TGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCGAGGCGATCTGACTaGCAATGTGGAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPRRSD*QCGAFG
Trigger: CCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGACCGAGGCGATCTGACTaGCAATGTGGAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: SSPFPRTESNISMLQRLRPRRSD*QCGAFG
Trigger: CCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGG...TCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCGGTGCACAAAGTGCTaGGAGGCCAGGTACACCATA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRCTKC*EARYTI
Trigger: TATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGACGGTGCACAAAGTGCTaGGAGGCCAGGTACACCATA +
Preference number: 4 (lower is better)
Translates to: SSPFPRTESNISMLQRLRRCTKC*EARYTI
Trigger: TATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCG...TCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGCTGTAGACATCTCTaGACATGCCGAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVCCRHL*TCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACATCGTACACCTCTTTaGGGCAGACTCGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEHRTPL*GRLGAA
Trigger: AGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTTCAACCGCTGCTGTaGTTCCCTCTGCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVQPLL*FPLPAP
Trigger: GGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGTTCAACCGCTGCTGTaGTTCCCTCTGCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILVQPLL*FPLPAP
Trigger: GGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAAC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCAGGTAGATTGGGGTaGCCTTCCCCAAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPGRLG*PSPKHG
Trigger: TCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAATGTCCAGGTAGATTaGGGTGGCCTTCCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCNVQVD*GGLPQS
Trigger: GCTTTGGGGAAGGCCACCCCAATCTACCTGGACATT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGCTTACACCCAGGATaGATGCTGTCAGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSLHPG*MLSALV
Trigger: GACAAGAGCTGACAGCATCCATCCTGGGTGTAAGCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTCAGGTGGCAGTGTCTTaGCAGGGTTCAGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVQVAVS*QGSGFS
Trigger: GCTGAAACCTGAACCCTGCCAAGACACTGCCACCTG...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACAAGCAACAGGAGCATTaGTGCTTCACTTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHKQQEH*CFTSNQ
Trigger: CTGGTTAGAAGTGAAGCACCAATGCTCCTGTTGCTT...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGAGGAGTGTCTTATTaGAACTCAGCCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRGVSY*NSALPR
Trigger: CCTGGGCAAGGCTGAGTTCCAATAAGACACTCCTCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTGCAGAGAGACCAGCCTaGGTGCCCTGGAGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSAERPA*VPWSVH
Trigger: ATGAACGCTCCAGGGCACCCAGGCTGGTCTCTCTGC...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATTTGGCCAAGGCCACGTaGATAACTAATAGCAAAATC +
Preference number: 4 (lower is better)
Translates to: SSPAEEICGARLLASMFHLAKAT*ITNSKI
Trigger: GATTTTGCTATTAGTTATCCACGTGGCCTTGGCCAA...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCATCCCTGCAGTGCTGGTaGCGTCTATACCAACCCCCA +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISSLQCW*RLYQPP
Trigger: TGGGGGTTGGTATAGACGCCACCAGCACTGCAGGGA...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTTCCAGATGGGATTTGTaGAGACACATCACATGCATC +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVSRWDL*RHITCI
Trigger: GATGCATGTGATGTGTCTCCACAAATCCCATCTGGA...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp CACCCAGGATGGATGCTGTCAGCTCTTGTCATGGTTTaGTGTTGTGGGGTTGTCTGTTCTGTGTTTACCCGT +
Preference number: 4 (lower is better)
Translates to: HPGWMLSALVMV*CCGVVCSVFTR
Trigger: ACGGGTAAACACAGAACAGACAACCCCACAACACAAAACCATGACAAGAGCTGACAGCATCCATCCTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp GTGGGGAGCAGGGAATGGACAGCAAGTGTTCAGAGTTaGGACAGCTTCCAAAGGAGGGTCACAAGAGATAAA +
Preference number: 4 (lower is better)
Translates to: VGSREWTASVQS*DSFQRRVTRDK
Trigger: TTTATCTCTTGTGACCCTCCTTTGGAAGCTGTCCAAACTCTGAACACTTGCTGTCCATTCCCTGCTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp CCCAGGTATCAGGTGTCCCACATGCCAAACATACCATaGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRYQVSHMPNIP*FSSCHKPANPS
Trigger: TGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATGGTATGTTTGGCATGTGGGACACCTGATACCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAACGGCGTTGAGCGTGTaGAGACTGCGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVETALSV*RLRQFS
Trigger: AGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAACCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKPCPRR*ACEDCA
Trigger: GGCGCAGTCTTCACACGCTCAACGCCGTGGACATGG...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAATGCTCCGAAGTCCTaGGTTCTTGATGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVNAPKS*VLDGQL
Trigger: AAGCTGACCATCAAGAACTCAGGACTTCGGAGCATT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGCAAAGGCTCTGGGCTaGATGCTCCGAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEAKALG*MLRSPE
Trigger: CTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNATRVW*AGYLTG
Trigger: ACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGC...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGCCATCAGCGTTaGTGCAGTAGAGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGSHQR*CSRGSG
Trigger: GCCAGAACCTCTACTGCATCAACGCTGATGGCTCCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAAGGTCACACTGACTaGTGTTCATGCGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCEGHTD*CSCGRE
Trigger: CTCTCTTCCGCATGAACATCAGTCAGTGTGACCTTC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCAGGAAGGTCACACTaGCTGATGTTCATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSGRSH*LMFMRK
Trigger: CTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: AFSSPFPRTESNISMLQRHIRKG*SRAIAS
Trigger: ACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTG...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGHIRKG*SRAIAS
Trigger: ACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAATGGACTGCAGCCCAGTaGCTATCCAGTCCACATCAG +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQWTAAQ*LSSPHQ
Trigger: CTGATGTGGACTGGATAGTCACTGGGCTGCAGTCCA...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTTCAGATTGGTCTGGTaGGTGTTGATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCFRLVW*VLMDCS
Trigger: GCTGCAGTCCATCAACACTCACCAGACCAATCTGAA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCACCAGCGTCAAGTTaGTGGCATGAACATTGGTCC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSPASS*WHEHWS
Trigger: GGACCAATGTTCATGCCATCAACTTGACGCTGGTGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTTCACCAGCGTCAAGTTaGTGGCATGAACATTGGTCC +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLSPASS*WHEHWS
Trigger: GGACCAATGTTCATGCCATCAACTTGACGCTGGTGA...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCACAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASQCTSG*SHCPHS
Trigger: CGAGTGAGGACAATGGCTTCACCCTGACGTGCATTG...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp CTATACACTGAACACTCCTATAAGTCTCTGTGGAAACACAACGCCCCATTGTCAGGGGATAGTAGACAGTaGGGGCAACACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: LYTEHSYKSLWKHNAPLSGDSRQ*GQHWHC
Trigger: GCAATGCCAGTGTTGCCCTCACTGTCTACTATCCCC...TGACAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGAGTGTTCAGTGTATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAAGGGGATAGTAGACAGTaGGGGCAACACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQGDSRQ*GQHWHC
Trigger: GCAATGCCAGTGTTGCCCTCACTGTCTACTATCCCC...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSIPHG*SWTPAE
Trigger: CTCTGCGGGAGTCCAAGATCATCCATGTGGAATACT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSSIPHG*SWTPAE
Trigger: CTCTGCGGGAGTCCAAGATCATCCATGTGGAATACT...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATTGGCAGTTGTGTCCCTaGCGGAAGTACTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNWQLCP*RKYWGF
Trigger: GAACCCCCAGTACTTCCGTCAGGGACACAACTGCCA...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GGAGCTGGGAGCCAGAAGTCTACTCCACCAATGAGTCAGCAAATACGGGAGAGTGTTGATGGGACTAGATaGTCTCTATTGTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GAGSQKSTPPMSQQIRESVDGTR*SLLSFK
Trigger: CTTGAAGGACAATAGAGATCATCTAGTCCCATCAAC...ACTCTCCCGTATTTGCTGACTCATTGGTGGAGTAGACTTCTGGCTCCCAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGATACCCGAGGCGATCTaGCTGGCAATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGIPEAI*LAMWSI
Trigger: AATGCTCCACATTGCCAGTCAGATCGCCTCGGGTAT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCAGAGTATGAATTCATaGCCACCAGCCACCACTAGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCQSMNS*PPATTS
Trigger: GCTAGTGGTGGCTGGTGGTCATGAATTCATACTCTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGAGGCAACAGAGTATaGATTCATGACCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGGNRV*IHDHQP
Trigger: TGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACTCTCAGAGGCGATGTaGCATGGTCTTCTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVLSEAM*HGLLKG
Trigger: ACCTTTTAGAAGACCATGTCACATCGCCTCTGAGAG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGCTTTAACAGTACTGTaGAGGAGGTCATCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTALTVL*RRSSPP
Trigger: TGGAGGGGATGACCTCCTTCACAGTACTGTTAAAGC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTTGCTGTCCCTGGTGCTaGAAACATACACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTCCPWC*KHTPRL
Trigger: AAGCCTGGGTGTATGTTTTCAGCACCAGGGACAGCA...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTTTCTTTCTACTTCTCTaGGCCAGGAGAGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAFFLLL*ARRAGS
Trigger: ACTCCCAGCTCTCCTGGCTCAGAGAAGTAGAAAGAA...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACACAGGATTCATCCTaGCATGAGTGGAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVTQDSS*HEWRRC
Trigger: GCATCTTCTCCACTCATGTCAGGATGAATCCTGTGT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELFPES*PSRRGK
Trigger: CTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTACTGGCGTTCCCATTaGTGTTCCCTGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGYWRSH*CSLNPA
Trigger: GGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGCTCCTGCCAGAGCTaGATCCAGCGGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECSCQS*IQRMSQ
Trigger: CTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTCACTGGCATTGCTCATaGCCACCACGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVHWHCS*PPRSLQ
Trigger: TTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTG...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAAGGGCAACACTGGCATTaGTCATGCCCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQGQHWH*SCPPRS
Trigger: AGAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCC...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGCACCACAAACTCGATaGAGTGCTCCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEAPQTR*SAPGAA
Trigger: AGCTGCGCCTGGAGCACTGCATCGAGTTTGTGGTGC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGCACCACAAACTCGATaGAGTGCTCCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILAPQTR*SAPGAA
Trigger: AGCTGCGCCTGGAGCACTGCATCGAGTTTGTGGTGC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGAGGCTGCCCATTGTaGAGCCAGTGCAGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERGCPL*SQCSVG
Trigger: ACCAACGCTGCACTGGCTGCACAATGGGCAGCCTCT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGAGAGGCTGCCCATTGTaGAGCCAGTGCAGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLRGCPL*SQCSVG
Trigger: ACCAACGCTGCACTGGCTGCACAATGGGCAGCCTCT...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACGACTCCCGCAGAGGCTaGCCATTGTGCAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNDSRRG*PLCSQC
Trigger: GCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTC...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGGTCTGGTTGGCTGTaGCCAGTGGGTTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGWSGWL*PVGFWQ
Trigger: TTGCCAAAAACCCACTGGGCACAGCCAACCAGACCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTTGGTCTGGTTGGCTGTaGCCAGTGGGTTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLWSGWL*PVGFWQ
Trigger: TTGCCAAAAACCCACTGGGCACAGCCAACCAGACCA...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGCGCCGTCTCCACCTCTaGTTAGGTGCTCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ADSIGFQKFSESRISGSRRRLHL*LGALCD
Trigger: GTCACAGAGAGCACCTAAGCAGAGGTGGAGACGGCG...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp CAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGGAGAAACTCTCCTCTaGAAGGAGTTTTCTAATGTC +
Preference number: 4 (lower is better)
Translates to: QREQCLELPTSQRAQPTKGETLL*KEFSNV
Trigger: GACATTAGAAAACTCCTTGCAGAGGAGAGTTTCTCC...CTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCTCCTCTTAATGTGCTaGACATACGTGTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCLLLMC*TYVSGL
Trigger: CAAGCCGGACACGTATGTGCAGCACATTAAGAGGAG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCTCTCCTCTTAATGTaGTGCACATACGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSLLLM*CTYVSG
Trigger: GCCGGACACGTATGTGCAGCACATTAAGAGGAGAGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTTGACAATGTGCTCATaGTGCAGGTTGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCLTMCS*CRLVSS
Trigger: GCTGCTCACCAACCTGCAGCATGAGCACATTGTCAA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGATCCACAAGGATCATTaGATCTGGCCCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGIHKDH*IWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGAT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGATCCACAAGGATCATTaGATCTGGCCCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FLSFPEDRIQYKHASTSQIHKDH*IWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGAT...CTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCTCGGTGCACAAAGTaGTGGGAGGCCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESRCTK*WEARYT
Trigger: GGTGTACCTGGCCTCCCAGCACTTTGTGCACCGAGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRHLWT*RSPQSS
Trigger: TGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGCTGTGGTTCCCTCTaGCAGCACCCCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECCGSL*QHPSMT
Trigger: TGTCATGCTGGGGTGCTGGCAGAGGGAACCACAGCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTTGATGTTCAACCGCTaGTGTGGTTCCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGLMFNR*CGSLCQ
Trigger: CTGGCAGAGGGAACCACAGCAGCGGTTGAACATCAA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAAGCCATAGTGTACCCTaGAATTTCCATGGCCCTATT +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWASHSVP*NFHGPI
Trigger: AATAGGGCCATGGAAATTGCAGGGTACACTATGGCT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGTGTGTCCCAGTACATaGCACACTCCCCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISVCPST*HTPQSH
Trigger: ATGGCTCTGGGGAGTGTGGCATGTACTGGGACACAC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTAAATATGGTGCATACTaGCTGGGTGATGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLKYGAY*LGDGCA
Trigger: GGCACACCCATCACCCAGGCAGTATGCACCATATTT...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTGGAGACACATCACATaGATCTCAATGAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHWRHIT*ISMSFA
Trigger: TGCAAAGCTCATTGAGATGCATGTGATGTGTCTCCA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAATTTACACTCTGGGATaGGAGAAGCAAGAAATCCCG +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWAIYTLG*EKQEIP
Trigger: CGGGATTTCTTGCTTCTCGCATCCCAGAGTGTAAAT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACCTTCTAGAGATGCCTaGTCTGCATCTCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVPSRDA*SASLVS
Trigger: TGAGACTAGAGATGCAGAGCAGGCATCTCTAGAAGG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAAATCAGTCCTCATGCCTaGACAACCTGTCCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQISPHA*TTCPGV
Trigger: TACCCCCGGACAGGTTGTGCAGGCATGAGGACTGAT...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558576.5
CDS-3UTR GCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCAAGATAACTGTTGAGTaGATGTCTGGGCATGGGTGT +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAKITVE*MSGHGC
Trigger: ACACCCATGCCCAGACATGCACTCAACAGTTATCTT...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGTCTTGGCAAAGGCTCTaGGCTGAATGCTCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: FLSFPEDRIQYKHASTSQSWQRL*AECSEV
Trigger: GACTTCGGAGCATTCAGCCCAGAGCCTTTGCCAAGA...CTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGCTCCTTGAGGAAGTaGCCATTGATGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGSLRK*PLMVWL
Trigger: CAACCAGACCATCAATGGCCACTTCCTCAAGGAGCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTGTTATCCGTGCTCTCTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPVIRAL*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGAGAGCACGGATAAC...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CTATACACTGAACACTCCTATAAGTCTCTGTGGAAACACAACGCCCCATTGTCAGTGCCGGGGCACTGGTaGCTCATGCAGTTTCTACTT +
Preference number: 4 (lower is better)
Translates to: LYTEHSYKSLWKHNAPLSVPGHW*LMQFLL
Trigger: AAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCAC...TGACAATGGGGCGTTGTGTTTCCACAGAGACTTATAGGAGTGTTCAGTGTATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAAGCTCGGCCTCCCTCTaGAAATCCTTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKSSASL*KSFRAA
Trigger: GGCTGCCCGGAAGGATTTCCAGAGGGAGGCCGAGCT...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGGTGCACAAAGTGCTaGGAGGCCAGGTACACCATA +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQRCTKC*EARYTI
Trigger: TATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCG...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGACGGTGCACAAAGTGCTaGGAGGCCAGGTACACCATA +
Preference number: 4 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRRCTKC*EARYTI
Trigger: TATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCG...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGCTGTAGACATCTCTaGACATGCCGAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCCCRHL*TCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCCGTGTTTGAGAGTTaGAACCATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSVFES*NHGCFP
Trigger: TGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGATGGAAAAGACAGGTaGCAGTGTCTTGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTDGKDR*QCLGRV
Trigger: AACCCTGCCAAGACACTGCCACCTGTCTTTTCCATC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCAAGCCTGCAGCACTaGCCGCTCATTGGACATCTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPSLQH*PLIGHL
Trigger: GAGATGTCCAATGAGCGGCCAGTGCTGCAGGCTTGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTCCCAAATCCCAACCATaGCTACAATCTGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAPKSQP*LQSEHS
Trigger: GCTGTGCTCAGATTGTAGCCATGGTTGGGATTTGGG...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTGTAGGAATGCCAGGATaGGAAGCCGACCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVVGMPG*EADQML
Trigger: GAGCATTTGGTCGGCTTCCCATCCTGGCATTCCTAC...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAAGAGGCGATGTGACATaGTCTTCTAAAAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWARGDVT*SSKRWT
Trigger: AGTCCACCTTTTAGAAGACCATGTCACATCGCCTCT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTATCACCACACCTACTATaGTCAGCAGTGCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVSPHLL*SAVPFR
Trigger: TCTGAAAGGCACTGCTGACCATAGTAGGTGTGGTGA...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTATGACCTTGTTGCAATaGGATCTTGAATCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVMTLLQ*DLESLE
Trigger: CTCTAGGGATTCAAGATCCCATTGCAACAAGGTCAT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCAAGTGTTCAGAGTTTaGACAGCTTCCAAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVQVFRV*TASKGG
Trigger: CCCTCCTTTGGAAGCTGTCCAAACTCTGAACACTTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCACCTCAACTGCTGTaGTCAACGTCTCCACCCATA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGAPQLL*STSPPI
Trigger: TATGGGTGGAGACGTTGACCACAGCAGTTGAGGTGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp GATGACAAACCAGTGCTTAGAAAACAGCTACATCTTTaGTCCCAGTTGGGAGAAACAGGAGCTGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DDKPVLRKQLHL*SQLGETGAVAA
Trigger: GGCAGCCACAGCTCCTGTTTCTCCCAACTGGGACAAAAGATGTAGCTGTTTTCTAAGCACTGGTTTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp AGCCCAGTGCTCTTCTCCTGCCCCATGCTAACCGTTTaGGTTCACGTTCTAATTCAATTTGAGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPVLFSCPMLTV*VHVLIQFECLS
Trigger: GCTCAGACACTCAAATTGAATTAGAACGTGAACCAAAACGGTTAGCATGGGGCAGGAGAAGAGCACTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAACCGGCCGCCGGCAATTaGTCTCAGTCTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKPAAGN*SQSCCR
Trigger: TCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGG...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCCTATGTGTATGGAAGTaGTATTCCTTGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTALCVWK*YSLRCP
Trigger: CGGACATCTCAAGGAATATCACTTCCATACACATAG...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGAAGTCCTGAGTTCTTaGTGGTCAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVEVLSS*WSAFEV
Trigger: GACTTCAAAAGCTGACCATCAAGAACTCAGGACTTC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAGAAGTCCTGAGTTCTTaGTGGTCAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVEVLSS*WSAFEV
Trigger: GACTTCAAAAGCTGACCATCAAGAACTCAGGACTTC...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAATGCTCCGAAGTCCTaGGTTCTTGATGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCNAPKS*VLDGQL
Trigger: AAGCTGACCATCAAGAACTCAGGACTTCGGAGCATT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGTGAGCCGGTTACTTaGCAGGTTTATATAACGCAA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGEPVT*QVYITQ
Trigger: TTGCGTTATATAAACCTGTCAAGTAACCGGCTCACC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTGAAGGTCACACTGACTaGTGTTCATGCGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: AFSSPFPRTESNISMLQREGHTD*CSCGRE
Trigger: CTCTCTTCCGCATGAACATCAGTCAGTGTGACCTTC...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTCAGGAAGGTCACACTaGCTGATGTTCATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSGRSH*LMFMRK
Trigger: CTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTTCAGGAAGGTCACACTaGCTGATGTTCATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLSGRSH*LMFMRK
Trigger: CTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGA...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTATGGACTGCAGCCCAGTaGCTATCCAGTCCACATCAG +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILWTAAQ*LSSPHQ
Trigger: CTGATGTGGACTGGATAGTCACTGGGCTGCAGTCCA...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTTTCAGATTGGTCTGGTaGGTGTTGATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLFRLVW*VLMDCS
Trigger: GCTGCAGTCCATCAACACTCACCAGACCAATCTGAA...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTCAAGTTGATGGCATaGACATTGGTCCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVVKLMA*TLVQFR
Trigger: TCTGAACTGGACCAATGTTCATGCCATCAACTTGAC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQCTSG*SHCPHS
Trigger: CGAGTGAGGACAATGGCTTCACCCTGACGTGCATTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGATAGTAGACAGTaGGGGCAACACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGDSRQ*GQHWHC
Trigger: GCAATGCCAGTGTTGCCCTCACTGTCTACTATCCCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSIPHG*SWTPAE
Trigger: CTCTGCGGGAGTCCAAGATCATCCATGTGGAATACT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAACTGGGGGTTCTCAATaGCAGGGATGCGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVETGGSQ*QGCESC
Trigger: GCATGACTCGCATCCCTGTCATTGAGAACCCCCAGT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGTCTACTCCACCAATaGGTCAGCAAATACGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPSLLHQ*VSKYGR
Trigger: TCTCCCGTATTTGCTGACTCATTGGTGGAGTAGACT...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTTTTGTAGATCTCCTTaGTGTTCAACCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVFCRSP*CSTAAV
Trigger: CACAGCAGCGGTTGAACATCAAGGAGATCTACAAAA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAGAGTATGAATTCATaGCCACCAGCCACCACTAGC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGQSMNS*PPATTS
Trigger: GCTAGTGGTGGCTGGTGGTCATGAATTCATACTCTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAAGCAGGATGAGAAACTaGGAGGACCAGGGGGCATTC +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTSRMRN*EDQGAF
Trigger: GAATGCCCCCTGGTCCTCTCAGTTTCTCATCCTGCT...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACTTCCATGTTTCATGTaGCAGGGAGGCCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELPCFM*QGGPEV
Trigger: GACCTCTGGGCCTCCCTGTCACATGAAACATGGAAG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAACCCCAAGATCAGCGTaGAAGCCCGTGGGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKTPRSA*KPVGLR
Trigger: CCTTAGGCCCACGGGCTTTCACGCTGATCTTGGGGT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAGGAGTAATTTGTGCATaGTCTGCTGAATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVGVICA*SAEWRK
Trigger: CTTCCTCCATTCAGCAGATCATGCACAAATTACTCC...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATTCCAGTGGCCTGCATaGGAGATGGGCAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKFQWPA*EMGRPL
Trigger: GAGAGGCCTGCCCATCTCTCATGCAGGCCACTGGAA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGAGCCAAAAACACAGTaGCTTCAGCACCCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILEPKTQ*LQHPSP
Trigger: CGGGCTTGGGTGCTGAAGTCACTGTGTTTTTGGCTC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATGTGGGTCACGACACTaGACAAAAAGCAATATTTGC +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWACGSRH*TKSNIC
Trigger: GCAAATATTGCTTTTTGTTCAGTGTCGTGACCCACA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGTGGGAGCTAAGCTGTaGGGATGTCAAGGTATAAGA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTVGAKL*GCQGIR
Trigger: TCTTATACCTTGACATCCTCACAGCTTAGCTCCCAC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTATGCCCATCAATCAATaGGCAGATAAAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVMPINQ*ADKETV
Trigger: CACAGTTTCTTTATCTGCTCATTGATTGATGGGCAT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAAAATCATCGTTCCACTaGACTTGCTCCTCTGAGATC +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVKSSFH*TCSSEI
Trigger: GATCTCAGAGGAGCAAGTTCAGTGGAACGATGATTT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGGCATAAGATCCAGTTaGAAGCACCTCAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTGIRSS*KHLNCC
Trigger: ACAGCAGTTGAGGTGCTTTCAACTGGATCTTATGCC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCATGGCCATCTATAAATaGGGAAGCAGACCTTTACCA +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAMAIYK*GSRPLP
Trigger: TGGTAAAGGTCTGCTTCCTCATTTATAGATGGCCAT...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCCTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVLFPES*PSRRGK
Trigger: CTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAG...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp GAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGTGCTCCTGCCAGAGCTaGATCCAGCGGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: EDRIQYKHASTSQNFLMGCSCQS*IQRMSQ
Trigger: CTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCA...CCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEAHHVL*NARQGE
Trigger: TTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLAHHVL*NARQGE
Trigger: TTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGC...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCACACTGGCATTGCTCATaGCCACCACGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASHWHCS*PPRSLQ
Trigger: TTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTG...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAACACTGGCATTaGTCATGCCCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGQHWH*SCPPRS
Trigger: AGAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGGGGCAACACTGGCATTaGTCATGCCCACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLGQHWH*SCPPRS
Trigger: AGAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCC...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTGCACCACAAACTCGATaGAGTGCTCCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SFPEDRIQYKHASTSQNFAPQTR*SAPGAA
Trigger: AGCTGCGCCTGGAGCACTGCATCGAGTTTGTGGTGC...AAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGCAGCAAGTCCAACTaGTATGGATACCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSSKSN*YGYPKS
Trigger: ACTTTTGGGGTATCCATAGCAGTTGGACTTGCTGCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAAGCAGCAAGTCCAACTaGTATGGATACCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVSSKSN*YGYPKS
Trigger: ACTTTTGGGGTATCCATAGCAGTTGGACTTGCTGCT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCTCCTCTTAATGTGCTaGACATACGTGTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGLLLMC*TYVSGL
Trigger: CAAGCCGGACACGTATGTGCAGCACATTAAGAGGAG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTCTCTCCTCTTAATGTaGTGCACATACGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSLLLM*CTYVSG
Trigger: GCCGGACACGTATGTGCAGCACATTAAGAGGAGAGA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTTGACAATGTGCTCATaGTGCAGGTTGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGLTMCS*CRLVSS
Trigger: GCTGCTCACCAACCTGCAGCATGAGCACATTGTCAA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTTTGACAATGTGCTCATaGTGCAGGTTGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AFSSPFPRTESNISMLQRLTMCS*CRLVSS
Trigger: GCTGCTCACCAACCTGCAGCATGAGCACATTGTCAA...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAATCCACAAGGATCATTaGATCTGGCCCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASIHKDH*IWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGAT...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGAATCCACAAGGATCATTaGATCTGGCCCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRIHKDH*IWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGAT...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRHLWT*RSPQSS
Trigger: TGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCCTGTAATAATCCGTaGTGTAGACATCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPCNNP*CRHLWT
Trigger: TGTCCAGAGATGTCTACAGCACGGATTATTACAGGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
CDS-3UTR GCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATGCAACCCTAAAGCGTaGTGTGTCTACATTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWACNPKA*CVYIQR
Trigger: TCTTTGAATGTAGACACAGCACGCTTTAGGGTTGCA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTACCCACTCCACTGCTTaGTTTCCTGAAACACTCACT +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLATHSTA*FPETLT
Trigger: AGTGAGTGTTTCAGGAAAGCAAGCAGTGGAGTGGGT...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAACCCAGTTCTTCTCCTaGTTCTTCCCAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISTQFFS*FFPAHQ
Trigger: CTGATGGGCTGGGAAGAAGCAGGAGAAGAACTGGGT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCTACTTAACTTCCAATaGACCCTGTACTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTLLNFQ*TLYSPG
Trigger: GCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGACAGCTCTCTGGACTaGTGGCAGGTGGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEDSSLD*WQVGSF
Trigger: GAATGAACCCACCTGCCAGCAGTCCAGAGAGCTGTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTGAGGAGAATGAGTCATaGAGAGCTTCTGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAEENES*RASVRS
Trigger: GCTTCTGACAGAAGCTCTGCATGACTCATTCTCCTC...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAGCCACGGCTCCTCTaGTCCTGGAGGCTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQPRLL*SWRLKV
Trigger: AACTTTTAGCCTCCAGGAGCAGAGGAGCCGTGGCTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAACGTGAATGTAGTTTaGACTATGAGCACGAGCACC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVNVNVV*TMSTST
Trigger: GGTGCTCGTGCTCATAGTGCAAACTACATTCACGTT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCTGGCCTGAAGAATaGCACAAGGAGTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCVWPEE*HKESFA
Trigger: TGCAAATGACTCCTTGTGGCATTCTTCAGGCCAGAC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTCCCCTGAATCCCTCATaGTCCCTCCTGCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: FPEDRIQYKHASTSQNFLPLNPS*SLLQTW
Trigger: CCAGGTCTGCAGGAGGGAGCATGAGGGATTCAGGGG...AAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCATGGCAACAGATAACATaGTTCCTTTCCTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPWQQIT*FLSSSV
Trigger: AACAGATGAGGAAAGGAAGCATGTTATCTGTTGCCA...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCTCGGTCTATGACTACTaGCACATCATGTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTASVYDY*HIMSPF
Trigger: AAAAGGAGACATGATGTGGCAGTAGTCATAGACCGA...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERRLSV*KSCHES
Trigger: ACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGT +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILRRLSV*KSCHES
Trigger: ACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAACGGTCAGGTTGACGTaGCTCACGCTGATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVETVRLT*LTLISG
Trigger: TCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGACGGTCAGGTTGACGTaGCTCACGCTGATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLTVRLT*LTLISG
Trigger: TCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGT...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAGGCTCACCACACGTaGGGGATAGTAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQAHHT*GIVDSE
Trigger: CTCACTGTCTACTATCCCCCACGTGTGGTGAGCCTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCCAGTGCAGCGTTGGTaGGGGGTTGCCACGCACCAC +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAPVQRW*GVATHH
Trigger: GTGGTGCGTGGCAACCCCCCACCAACGCTGCACTGG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCTGGCCATTGATGGTCTaGTTGGCTGTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVWPLMV*LAVPSG
Trigger: CCCACTGGGCACAGCCAACCAGACCATCAATGGCCA...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGTTATCCGTGCTCTCTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGVIRAL*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGAGAGCACGGATAAC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360948.6
ENST00000394480.6
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSSSGL*VTVIGG
Trigger: ACCTCCTATCACTGTGACCCACAAACCAGAAGAAGA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTTGTCGGCCTTCATTCCAAATTTaGACCGTCGACCATATTTGT +
Preference number: 4 (lower is better)
Translates to: PSRMASSWVKPPAAKACRPSFQI*TVDHIC
Trigger: ACAAATATGGTCGACGGTCCAAATTTGGAATGAAGG...CCGACAAGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATGTGGTGCAGTGGGCTaGCTGAGTCCTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKCGAVG*LSPPHH
Trigger: GTGGTGAGGAGGACTCAGCCAGCCCACTGCACCACA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCATGCCGTGGTTGATGTaGTGCAGTGGGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVMPWLM*CSGLAE
Trigger: CTCAGCCAGCCCACTGCACCACATCAACCACGGCAT...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp CACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGACACTTCCCCACTCTaGACCTCAGGTTCCTCATAT +
Preference number: 4 (lower is better)
Translates to: HWWLMQFLLSIPGSKENNDTSPL*TSGSSY
Trigger: ATATGAGGAACCTGAGGTCCAGAGTGGGGAAGTGTC...ATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AAGGCTTATTGGATTCAACATAATTTCTCTGAAACACGTGTCCGGCTTGTGGCAGAGCACAGTGATGATTaGAGGGAAGGGGCAACCCTG +
Preference number: 4 (lower is better)
Translates to: KAYWIQHNFSETRVRLVAEHSDD*REGATL
Trigger: CAGGGTTGCCCCTTCCCTCCAATCATCACTGTGCTC...TGCCACAAGCCGGACACGTGTTTCAGAGAAATTATGTTGAATCCAATAAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR CCA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGGGCCCAGGAAGAGCCTaGAGAAACTCTCCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ADSIGFQKFSESRISGSRGPGRA*RNSPLQ
Trigger: TTGCAGAGGAGAGTTTCTCCAGGCTCTTCCTGGGCC...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGGGCTGCCCCAGATACTaGGCAAGAACTTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: ADSIGFQKFSESRISGSRGCPRY*ARTWKA
Trigger: GGCTTTCCAAGTTCTTGCCCAGTATCTGGGGCAGCC...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACTCACTTCGTCAACTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTHFVN*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGTTGACGAAGTGAGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000557856.5
CDS-3UTR CCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTTCCGGGCAGCCAGGGTaGGATCCTTCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLSGQPG*DPSGPS
Trigger: TGAAGGCCCTGAAGGATCCCACCCTGGCTGCCCGGA...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGATTGCATCTGGCCCATaGGCCCTGAGGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGIASGP*ALRNLF
Trigger: GAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAAT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCGAGGCGATCTGACTaGCAATGTGGAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPRRSD*QCGAFG
Trigger: CCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACGGTGCACAAAGTGCTaGGAGGCCAGGTACACCATA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERCTKC*EARYTI
Trigger: TATGGTGTACCTGGCCTCCCAGCACTTTGTGCACCG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGATGCTGTAGACATCTCTaGACATGCCGAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SSPFPRTESNISMLQRLRCCRHL*TCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCA...TCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGCTGTAGACATCTCTaGACATGCCGAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGCCRHL*TCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCCGTGTTTGAGAGTTaGAACCATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSVFES*NHGCFP
Trigger: TGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCAGGTAGATTGGGGTaGCCTTCCCCAAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPGRLG*PSPKHG
Trigger: TCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGCACTGGCCGCTCATTaGACATCTCCCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFALAAH*TSPREA
Trigger: GGCTTCTCTGGGAGATGTCCAATGAGCGGCCAGTGC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCCCGTGGGCCTAAGGTaGCAGCAATCTGACAACTGC +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFPVGLR*QQSDNC
Trigger: GCAGTTGTCAGATTGCTGCCACCTTAGGCCCACGGG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATGCAGCCCCAGAAGCTaGCTGACAGCTCTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKCSPRS*LTALPL
Trigger: CAACGGGAGAGCTGTCAGCCAGCTTCTGGGGCTGCA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAGGCCTGCATGAGAGATaGGCAGGCCTCTCTCCATAT +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTGLHER*AGLSPY
Trigger: ATATGGAGAGAGGCCTGCCCATCTCTCATGCAGGCC...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGAGTCTGGCTCATTCTaGAGCCAACCACTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTESGSF*SQPLLK
Trigger: TTTAAGGAGTGGTTGGCTCCAGAATGAGCCAGACTC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACACTTGGTCCAGGGGGCTaGAAAGATACTGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTLGPGG*KDTDGW
Trigger: CCAGCCATCAGTATCTTTCCAGCCCCCTGGACCAAG...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTGCTTTGCTGACATGTaGAACTCCTCATCTATAGAA +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHCFADM*NSSSIE
Trigger: TTCTATAGATGAGGAGTTCCACATGTCAGCAAAGCA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCCCATGTACAAATGCTaGTCCTGGCATGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTPMYKC*SWHEQG
Trigger: ACCCTGTTCATGCCAGGACCAGCATTTGTACATGGG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTCTCATTTCGAAAGCTaGGATGCTTTTTGTCTACTG +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHSHFES*DAFCLL
Trigger: CAGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGCAAGTGTGAGCACTaGAATGAGATTCACTCAAGA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGKCEH*NEIHSR
Trigger: TCTTGAGTGAATCTCATTCCAGTGCTCACACTTGCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGACACATGTTTGCCTTaGGATGGAAGCATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGDTCLP*DGSMRV
Trigger: CACCCTCATGCTTCCATCCCAAGGCAAACATGTGTC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACAAGGCGCTAGCTCTGTaGCTGAGTCCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNKALAL*LSPAAG
Trigger: CCCAGCTGCAGGACTCAGCCACAGAGCTAGCGCCTT...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGCTGGCAGGTCTGCCCTaGCCATCGGTCTATGACTAC +
Preference number: 4 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTELAGLP*PSVYDY
Trigger: GTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGAAGTGATATTCCTTaGGATGTCCGTGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGSDIP*DVRDVD
Trigger: ATCAACATCACGGACATCTCAAGGAATATCACTTCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAGGAAGTGATATTCCTTaGGATGTCCGTGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVGSDIP*DVRDVD
Trigger: ATCAACATCACGGACATCTCAAGGAATATCACTTCC...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCTATGTGTATGGAAGTaGTATTCCTTGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVLCVWK*YSLRCP
Trigger: CGGACATCTCAAGGAATATCACTTCCATACACATAG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAAACGGCGTTGAGCGTGTaGAGACTGCGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKTALSV*RLRQFS
Trigger: AGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGT...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAAGTCCTGAGTTCTTaGTGGTCAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCEVLSS*WSAFEV
Trigger: GACTTCAAAAGCTGACCATCAAGAACTCAGGACTTC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAATGCTCCGAAGTCCTaGGTTCTTGATGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGNAPKS*VLDGQL
Trigger: AAGCTGACCATCAAGAACTCAGGACTTCGGAGCATT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTAATGCTCCGAAGTCCTaGGTTCTTGATGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLNAPKS*VLDGQL
Trigger: AAGCTGACCATCAAGAACTCAGGACTTCGGAGCATT...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAGCAAAGGCTCTGGGCTaGATGCTCCGAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKAKALG*MLRSPE
Trigger: CTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGC...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCGGTGAGCCGGTTACTTaGCAGGTTTATATAACGCAA +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSGEPVT*QVYITQ
Trigger: TTGCGTTATATAAACCTGTCAAGTAACCGGCTCACC...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTGAGCCGGTTACTTaGCAGGTTTATATAACGCAA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGEPVT*QVYITQ
Trigger: TTGCGTTATATAAACCTGTCAAGTAACCGGCTCACC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGGGAGCCATCAGCGTTaGTGCAGTAGAGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKGSHQR*CSRGSG
Trigger: GCCAGAACCTCTACTGCATCAACGCTGATGGCTCCC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGAGAAGGTCACACTGACTaGTGTTCATGCGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKREGHTD*CSCGRE
Trigger: CTCTCTTCCGCATGAACATCAGTCAGTGTGACCTTC...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEHIRKG*SRAIAS
Trigger: ACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATTGGACTGCAGCCCAGTaGCTATCCAGTCCACATCAG +
Preference number: 4 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYWTAAQ*LSSPHQ
Trigger: CTGATGTGGACTGGATAGTCACTGGGCTGCAGTCCA...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCAAGTTGATGGCATaGACATTGGTCCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCVKLMA*TLVQFR
Trigger: TCTGAACTGGACCAATGTTCATGCCATCAACTTGAC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACGATCGCTGCTTCTTTaGAACGCCGAGCGATCAGAT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERSLLL*NAERSD
Trigger: ATCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATACCCGAGGCGATCTaGCTGGCAATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEIPEAI*LAMWSI
Trigger: AATGCTCCACATTGCCAGTCAGATCGCCTCGGGTAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTTTTGTAGATCTCCTTaGTGTTCAACCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCFCRSP*CSTAAV
Trigger: CACAGCAGCGGTTGAACATCAAGGAGATCTACAAAA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAAAGGAATCTTTGCAATaGTGGAAAAGACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVKESLQ*WKRQVA
Trigger: TGCCACCTGTCTTTTCCATCATTGCAAAGATTCCTT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACTTCTACTTCTGAGTTaGGTCTCGTGCAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILLLLLS*VSCSPR
Trigger: TCTGGGGCTGCACGAGACTCAACTCAGAAGTAGAAG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCTGTGGAATTATAGAGTaGGTCTGGCTCATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTCGIIE*VWLILE
Trigger: CTCCAGAATGAGCCAGACTCACTCTATAATTCCACA...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTATGCTGGTCCTGGCATaGACAGGGTACCACTTAAAA +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVMLVLA*TGYHLK
Trigger: TTTTAAGTGGTACCCTGTTCATGCCAGGACCAGCAT...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATTCACCCTGAACCAGTaGCTAAGCCAAATAGATAAA +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWAFTLNQ*LSQIDK
Trigger: TTTATCTATTTGGCTTAGTCACTGGTTCAGGGTGAA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAACAGTCCCCACCTACTaGTTTCTTTTTCTGATACCA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVTVPTY*FLFLIP
Trigger: TGGTATCAGAAAAAGAAATCAGTAGGTGGGGACTGT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATTGAAGGGTGGATGCTaGGAATCAGAGAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELKGGC*ESEKCP
Trigger: GGGGCACTTCTCTGATTCTCAGCATCCACCCTTCAA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTGAAACCTGCAGTGACTaGCTTGCCTTCCCAACACAG +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSETCSD*LAFPTQ
Trigger: CTGTGTTGGGAAGGCAAGTCAGTCACTGCAGGTTTC...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGATAGGAAGCAATCATaGTCAGCACTTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCDRKQS*SALSRS
Trigger: GCTTCTGGAAAGTGCTGATCATGATTGCTTCCTATC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCAGGAGTAGAGAGACGTaGATGACTCAACACCAGATT +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSRSRET*MTQHQI
Trigger: AATCTGGTGTTGAGTCATTCACGTCTCTCTACTCCT...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAGAACTCCTGACCTCGTaGTCCATCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKELLTS*SIHLSL
Trigger: GAGGCTGAGGTGGATGGATCACGAGGTCAGGAGTTC...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGCTGCAGACACAATTTaGAGGGCAAGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFAADTI*RASQHG
Trigger: TCCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKLFPES*PSRRGK
Trigger: CTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGAGGCTCTGGGCTGAATaGTCCGAAGTCCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLRLWAE*SEVLSS
Trigger: AGAACTCAGGACTTCGGAGCATTCAGCCCAGAGCCT...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCAGTTGAAAAAGTTCTaGTCCAACTGCAATTCCCGA +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVQLKKF*SNCNSR
Trigger: TCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACACTGGCATTGCTCATaGCCACCACGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEHWHCS*PPRSLQ
Trigger: TTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAAGCACCACAAACTCGATaGAGTGCTCCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKAPQTR*SAPGAA
Trigger: AGCTGCGCCTGGAGCACTGCATCGAGTTTGTGGTGC...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTAGAGGCTGCCCATTGTaGAGCCAGTGCAGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: FPEDRIQYKHASTSQNFLRGCPL*SQCSVG
Trigger: ACCAACGCTGCACTGGCTGCACAATGGGCAGCCTCT...AAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGGTCTGGTTGGCTGTaGCCAGTGGGTTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEWSGWL*PVGFWQ
Trigger: TTGCCAAAAACCCACTGGGCACAGCCAACCAGACCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGCAGCAAGTCCAACTaGTATGGATACCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSSKSN*YGYPKS
Trigger: ACTTTTGGGGTATCCATAGCAGTTGGACTTGCTGCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCAGCAGCAAGTCCAACTaGTATGGATACCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSSSKSN*YGYPKS
Trigger: ACTTTTGGGGTATCCATAGCAGTTGGACTTGCTGCT...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp CAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGAGTGTATTTAAAAGATaGTCCTGGTGCACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QREQCLELPTSQRAQPTKSVFKR*SWCTGF
Trigger: AAAACCTGTGCACCAGGAGCATCTTTTAAATACACT...CTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACGCCGAGCGATCAGATaGAAAATCCTTCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERRAIR*KILQRL
Trigger: CAGACGCTGAAGGATTTTGCATCTGATCGCTCGGCG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR GCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAATCCACAAGGATCATTaGATCTGGCCCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILIHKDH*IWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGAT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATCCACAAGGATCATTaGATCTGGCCCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEIHKDH*IWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp TTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTTCTCGGTGCACAAAGTaGTGGGAGGCCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: FPEDRIQYKHASTSQNFLSRCTK*WEARYT
Trigger: GGTGTACCTGGCCTCCCAGCACTTTGTGCACCGAGA...AAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp AGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: SLFLSFPEDRIQYKHASTRHLWT*RSPQSS
Trigger: TGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCT...CGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRHLWT*RSPQSS
Trigger: TGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: PSAFSSPFPRTESNISMLRHLWT*RSPQSS
Trigger: TGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCT...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCCCTGTAATAATCCGTaGTGTAGACATCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCPCNNP*CRHLWT
Trigger: TGTCCAGAGATGTCTACAGCACGGATTATTACAGGG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATTGATGTTCAACCGCTaGTGTGGTTCCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELMFNR*CGSLCQ
Trigger: CTGGCAGAGGGAACCACAGCAGCGGTTGAACATCAA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCTGTAATAATCCGTaGTGTAGACATCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCACNNP*CRHLWT
Trigger: TGTCCAGAGATGTCTACAGCACGGATTATTACAGGC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357724.6
ENST00000360948.6
ENST00000629765.2
CDS-3UTR GCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAAACAGGAGCTGTGGCTaGCTCTCTTGTAAGGACCAT +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISNRSCG*LSCKDH
Trigger: ATGGTCCTTACAAGAGAGGCAGCCACAGCTCCTGTT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTCCAGTGCTCTTCTCCTaGCCCATGCTAACCGTTTTG +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSPVLFS*PMLTVL
Trigger: CAAAACGGTTAGCATGGGGCAGGAGAAGAGCACTGG...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATTGCTCCTAGCCCAGTaGTCTTCTCCTGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKLLLAQ*SSPAPC
Trigger: GCATGGGGCAGGAGAAGAGCACTGGGCTAGGAGCAA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTCAGGTTCAGTTCTGTaGTTAAGATATAAACCTCTC +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHSGSVL*LRYKPL
Trigger: GAGAGGTTTATATCTTAAGCACAGAACTGAACCTGA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACCCGAAACAGAGGTGTTaGTTTTCTACACAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHPKQRC*FSTQEK
Trigger: TTTTTCTTGTGTAGAAAAGCAACACCTCTGTTTCGG...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTCCATTGTTCAGCAGTTaGCATAAGCCAGCTAACCCT +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVPLFSS*HKPANP
Trigger: AGGGTTAGCTGGCTTATGGCAACTGCTGAACAATGG...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGATTTTCTGGCAGGTCTaGCCTGGCCATCGGTCTATG +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLIFWQV*PGHRSM
Trigger: CATAGACCGATGGCCAGGGCAGACCTGCCAGAAAAT...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAAACTACACTTGGCTaGGCAAAGAGAGACATCCAT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCETTLG*AKRDIH
Trigger: ATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGAAACTACACTTGGCTaGGCAAAGAGAGACATCCAT +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTETTLG*AKRDIH
Trigger: ATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGTCTTGGCAAAGGCTCTaGGCTGAATGCTCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: ADSIGFQKFSESRISGSRSWQRL*AECSEV
Trigger: GACTTCGGAGCATTCAGCCCAGAGCCTTTGCCAAGA...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCTTGGCAAAGGCTCTaGGCTGAATGCTCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESWQRL*AECSEV
Trigger: GACTTCGGAGCATTCAGCCCAGAGCCTTTGCCAAGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTCTTGGCAAAGGCTCTaGGCTGAATGCTCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLSWQRL*AECSEV
Trigger: GACTTCGGAGCATTCAGCCCAGAGCCTTTGCCAAGA...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCAGGCTCACCACACGTaGGGGATAGTAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: EDRIQYKHASTSQNFLMGQAHHT*GIVDSE
Trigger: CTCACTGTCTACTATCCCCCACGTGTGGTGAGCCTG...CCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGGCTCCTTGAGGAAGTaGCCATTGATGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILGSLRK*PLMVWL
Trigger: CAACCAGACCATCAATGGCCACTTCCTCAAGGAGCC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGCTCCTTGAGGAAGTaGCCATTGATGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGSLRK*PLMVWL
Trigger: CAACCAGACCATCAATGGCCACTTCCTCAAGGAGCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSSSGL*VTVIGG
Trigger: ACCTCCTATCACTGTGACCCACAAACCAGAAGAAGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CCTACAAATGTGCCTTTCCTACTGAAGAAGGGAAAGTCACCCCCTTCCCTCTCCAAAAGTGTCTTCTTCTaGTTTGTGGGTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: PTNVPFLLKKGKSPPSLSKSVFF*FVGHSD
Trigger: ATCACTGTGACCCACAAACCAGAAGAAGACACTTTT...GGAGAGGGAAGGGGGTGACTTTCCCTTCTTCAGTAGGAAAGGCACATTTGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCACCTTCATTCCAAATTTaGACCGTCGACCATATTTGT +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWAPSFQI*TVDHIC
Trigger: ACAAATATGGTCGACGGTCCAAATTTGGAATGAAGG...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTGGCGTGGTGATGCCGTaGTTGATGTGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLGVVMP*LMWCSG
Trigger: CCCACTGCACCACATCAACCACGGCATCACCACGCC...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGAGGATGGCCAGTTCATaGGTAAAACCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ADSIGFQKFSESRISGSRRMASS*VKPPAA
Trigger: GGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCT...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGACTCACTTCGTCAACTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGTHFVN*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGTTGACGAAGTGAGT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000557856.5
CDS-3UTR CCA 90 bp CTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTATTGCATCTGGCCCATaGGCCCTGAGGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: LFLSFPEDRIQYKHASTSIASGP*ALRNLF
Trigger: GAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAAT...AGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFTLGLA*LSIHKD
Trigger: ATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGT...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAAACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKTLGLA*LSIHKD
Trigger: ATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGT...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGCCGAGGCGATCTGACTaGCAATGTGGAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTEPRRSD*QCGAFG
Trigger: CCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGG...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTCCGTGTTTGAGAGTTaGAACCATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSVFES*NHGCFP
Trigger: TGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCCAAAACACGACCTTaGGTAATGCACTCAATGACC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSKTRP*VMHSMT
Trigger: GGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAATGTCCAGGTAGATTaGGGTGGCCTTCCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVENVQVD*GGLPQS
Trigger: GCTTTGGGGAAGGCCACCCCAATCTACCTGGACATT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTCTCTCCCGTTGGTGTTaGTTTCTGCAGTATTTAGCA +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLALSRWC*FLQYLA
Trigger: TGCTAAATACTGCAGAAACCAACACCAACGGGAGAG...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCTCTCTCCATATCTTaGAATAGTTTCTGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPLSIS*NSFCQV
Trigger: CACTTGGCAGAAACTATTCCAAGATATGGAGAGAGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTTGGAGTTTGAGAAGCTaGATTGTCAGTCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLWSLRS*IVSPME
Trigger: TTCCATGGGACTGACAATCCAGCTTCTCAAACTCCA...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTTCTAAGCAGAAAGCCTaGCTCAGCATCATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVSKQKA*LSIMVR
Trigger: TCTGACCATGATGCTGAGCCAGGCTTTCTGCTTAGA...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATGTTGTGCCACAATGTaGAATTATAGAGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWACCATM*NYRVSL
Trigger: CAGACTCACTCTATAATTCCACATTGTGGCACAACA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAGTGGGGAGCAGGGAATaGACAGCAAGTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTVGSRE*TASVQS
Trigger: ACTCTGAACACTTGCTGTCCATTCCCTGCTCCCCAC...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGAGGCACTAATCACTTaGTCCAGGGGGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILEALIT*SRGLER
Trigger: TCTTTCCAGCCCCCTGGACCAAGTGATTAGTGCCTC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGATTTGGGGAATAGATaGTTTGGTCTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTDLGNR*FGLPAP
Trigger: AGGAGCTGGAAGACCAAACCATCTATTCCCCAAATC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGGGCTCTATTTGTCTaGCCCTGTACAGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGWALFV*PCTVHR
Trigger: TCTGTGAACTGTACAGGGCCAGACAAATAGAGCCCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGAAATTCAGAGCCTTaGATGGTACAGAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGNSEP*MVQRHS
Trigger: TGAATGCCTCTGTACCATCCAAGGCTCTGAATTTCC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTATGGCCAGTTCCCTCCTaGGGCTTCTATTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILWPVPS*GFYWHH
Trigger: ATGATGCCAATAGAAGCCCCAGGAGGGAACTGGCCA...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCCTGTTCCAGCCCATTTaGATAATGCTCAGCAATATA +
Preference number: 4 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTALFQPI*IMLSNI
Trigger: TATATTGCTGAGCATTATCCAAATGGGCTGGAACAG...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 72 bp TGCTGTCAGCTCTTGTCATGGTTTTGTGTTGTGGGGTaGTCTGTTCTGTGTTTACCCGTAGGTGCCATCATT +
Preference number: 4 (lower is better)
Translates to: CCQLLSWFCVVG*SVLCLPVGAII
Trigger: AATGATGGCACCTACGGGTAAACACAGAACAGACAACCCCACAACACAAAACCATGACAAGAGCTGACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp CGTGGGAATCCCACTCACACGTATTTTTGTTGGCACTaGGGCCTATTAAAGGTGTGGTCTAGCATTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RGNPTHTYFCWH*GLLKVWSSICS
Trigger: AGAGCAAATGCTAGACCACACCTTTAATAGGCCCAAGTGCCAACAAAAATACGTGTGAGTGGGATTCCCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp GTGAGGCTACCCAGCTTGCTGTGGACACTGTATGCTTaGTCTTATATTCTCTCACAACGGTACATCATCTGC +
Preference number: 4 (lower is better)
Translates to: VRLPSLLWTLYA*SYILSQRYIIC
Trigger: GCAGATGATGTACCGTTGTGAGAGAATATAAGACAAAGCATACAGTGTCCACAGCAAGCTGGGTAGCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGAAGTGATATTCCTTaGGATGTCCGTGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGSDIP*DVRDVD
Trigger: ATCAACATCACGGACATCTCAAGGAATATCACTTCC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCTATGTGTATGGAAGTaGTATTCCTTGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCLCVWK*YSLRCP
Trigger: CGGACATCTCAAGGAATATCACTTCCATACACATAG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTACGGCGTTGAGCGTGTaGAGACTGCGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLTALSV*RLRQFS
Trigger: AGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGT...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp CACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGAAGTCCTGAGTTCTTaGTGGTCAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: HWWLMQFLLSIPGSKENNEVLSS*WSAFEV
Trigger: GACTTCAAAAGCTGACCATCAAGAACTCAGGACTTC...ATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGGTGAGCCGGTTACTTaGCAGGTTTATATAACGCAA +
Preference number: 4 (lower is better)
Translates to: YLASLDPKRTMPRASNLSGEPVT*QVYITQ
Trigger: TTGCGTTATATAAACCTGTCAAGTAACCGGCTCACC...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGTGAGCCGGTTACTTaGCAGGTTTATATAACGCAA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGEPVT*QVYITQ
Trigger: TTGCGTTATATAAACCTGTCAAGTAACCGGCTCACC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGAAGGTCACACTGACTaGTGTTCATGCGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEEGHTD*CSCGRE
Trigger: CTCTCTTCCGCATGAACATCAGTCAGTGTGACCTTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCAGGAAGGTCACACTaGCTGATGTTCATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESGRSH*LMFMRK
Trigger: CTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTCAGGAAGGTCACACTaGCTGATGTTCATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSSGRSH*LMFMRK
Trigger: CTTCCGCATGAACATCAGTCAGTGTGACCTTCCTGA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFHIRKG*SRAIAS
Trigger: ACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATTCAGATTGGTCTGGTaGGTGTTGATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEFRLVW*VLMDCS
Trigger: GCTGCAGTCCATCAACACTCACCAGACCAATCTGAA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGTCAAGTTGATGGCATaGACATTGGTCCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGVKLMA*TLVQFR
Trigger: TCTGAACTGGACCAATGTTCATGCCATCAACTTGAC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCACCAGCGTCAAGTTaGTGGCATGAACATTGGTCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESPASS*WHEHWS
Trigger: GGACCAATGTTCATGCCATCAACTTGACGCTGGTGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESIPHG*SWTPAE
Trigger: CTCTGCGGGAGTCCAAGATCATCCATGTGGAATACT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACACTGGGGGTTCTCAATaGCAGGGATGCGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNTGGSQ*QGCESC
Trigger: GCATGACTCGCATCCCTGTCATTGAGAACCCCCAGT...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCGATCGCTGCTTCTTTaGAACGCCGAGCGATCAGAT +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFRSLLL*NAERSD
Trigger: ATCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTTTTGTAGATCTCCTTaGTGTTCAACCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGFCRSP*CSTAAV
Trigger: CACAGCAGCGGTTGAACATCAAGGAGATCTACAAAA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAGAGTATGAATTCATaGCCACCAGCCACCACTAGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQSMNS*PPATTS
Trigger: GCTAGTGGTGGCTGGTGGTCATGAATTCATACTCTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGTGTAGCAGGCACTTaGGTTTATATGAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVCVAGT*VYMKMF
Trigger: GAACATCTTCATATAAACTCAAGTGCCTGCTACACA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTTGTGCATGATCTGCTaGATGGAGGAAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTLCMIC*MEEAAP
Trigger: AGGTGCTGCTTCCTCCATTCAGCAGATCATGCACAA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAACTCACTTCTACTTCTaGGTTGAGTCTCGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTTHFYF*VESRAA
Trigger: GGCTGCACGAGACTCAACTCAGAAGTAGAAGTGAGT...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATCCAACTTTACAAGATaGCAGATTTCCCATCGTAAT +
Preference number: 4 (lower is better)
Translates to: LVGFDPELISSGLHERWASNFTR*QISHRN
Trigger: ATTACGATGGGAAATCTGTCATCTTGTAAAGTTGGA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTTTGCAATTTCAGCTTTaGGGTTCTATGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLLQFQL*GSMWLL
Trigger: CAACAGCCACATAGAACCTCAAAGCTGAAATTGCAA...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTTTAGGGGCTGTAAATaGCAGAATACTGTGACTTTG +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVFRGCK*QNTVTL
Trigger: CAAAGTCACAGTATTCTGTCATTTACAGCCCCTAAA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGCGTGCCAAAGTACTaGTGTGGTAGCTCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECVPKY*CGSSPK
Trigger: TTTGGGAGAGCTACCACATCAGTACTTTGGCACGCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAAAGGACACTTCTCCTaGAAACAAGTCCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTKGHFS*KQVPFT
Trigger: AGTGAAAGGGACTTGTTTTCAGGAGAAGTGTCCTTT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTTCCCTTAATATCAACTaGGAACACACCCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVSLNIN*EHTPLT
Trigger: GGTTAGAGGGGTGTGTTCTCAGTTGATATTAAGGGA...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAAGTATTCTCGCGATCTaGCAAATCAGAGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: SSPFPRTESNISMLQRLRSILAI*QIRAFL
Trigger: GAGGAATGCTCTGATTTGTCAGATCGCGAGAATACT...TCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558576.5
CDS-3UTR TCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCCTGGCCATCGGTCTATaGCTACTGCCACATCATGTC +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVLAIGL*LLPHHV
Trigger: GACATGATGTGGCAGTAGTCATAGACCGATGGCCAG...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGGGAAAGGCAATTAAATaGTGCCAGCTCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTEGKAIK*CQLQPH
Trigger: GTGGGGCTGGAGCTGGCATCATTTAATTGCCTTTCC...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCAGTTGAAAAAGTTCTaGTCCAACTGCAATTCCCGA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCQLKKF*SNCNSR
Trigger: TCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKAHHVL*NARQGE
Trigger: TTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACTCCTCTTAATGTGCTaGACATACGTGTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELLLMC*TYVSGL
Trigger: CAAGCCGGACACGTATGTGCAGCACATTAAGAGGAG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCTCTCCTCTTAATGTaGTGCACATACGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESLLLM*CTYVSG
Trigger: GCCGGACACGTATGTGCAGCACATTAAGAGGAGAGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTTGACAATGTGCTCATaGTGCAGGTTGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSLTMCS*CRLVSS
Trigger: GCTGCTCACCAACCTGCAGCATGAGCACATTGTCAA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATTGACAATGTGCTCATaGTGCAGGTTGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELTMCS*CRLVSS
Trigger: GCTGCTCACCAACCTGCAGCATGAGCACATTGTCAA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTTTGATGTTCAACCGCTaGTGTGGTTCCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFLMFNR*CGSLCQ
Trigger: CTGGCAGAGGGAACCACAGCAGCGGTTGAACATCAA...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACATACACCCAGGATGGATaGTGTCAGCTCTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTYTQDG*CQLLSW
Trigger: CCATGACAAGAGCTGACAGCATCCATCCTGGGTGTA...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTTAAGATTCCAAGCCTaGAGCACTGGCCGCTCATTG +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSLRFQA*STGRSL
Trigger: CAATGAGCGGCCAGTGCTGCAGGCTTGGAATCTTAA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTTGCGGTCTCCTTCAGTaGTTCTTGTTCCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFCGLLQ*FLFPQG
Trigger: TCCTTGGGGGAACAAGAAGCACTGAAGGAGACCGCA...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGGACCAAAGATCCTTTaGCTCAAGTGGGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTGPKIL*LKWEAS
Trigger: AGAGGCTTCCCACTTGAGGCAAAGGATCTTTGGTCC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTAGTCTCTGGCTTGTCTaGCTGGCTCCCTGTACAATA +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTSLWLV*LAPCTI
Trigger: TATTGTACAGGGAGCCAGGCAGACAAGCCAGAGACT...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGGTTTTCCCTGCAGTaGTGGTGGCGTCTATACCAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEWFSLQ*WWRLYQ
Trigger: TTGGTATAGACGCCACCAGCACTGCAGGGAAAACCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTACAACTTACTGCCCTaGCTCCCTATGATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCYNLLP*LPMMKE
Trigger: TTCTTTCATCATAGGGAGGCAGGGCAGTAAGTTGTA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCTATTACTGGGTATCTaGCCAGAGGAAAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCLLLGI*PEEKKS
Trigger: TGACTTCTTTTCCTCTGGGCAGATACCCAGTAATAG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTCAATGGCCCTATTTTaGAGAAAAGTTGCAATTTCA +
Preference number: 4 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHSMALF*RKVAIS
Trigger: TGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTTTCCAAAGACGCCTaGAACCATGCTGAGCAACTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVSKDA*NHAEQL
Trigger: GAGTTGCTCAGCATGGTTGCAGGCGTCTTTGGAAAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTGACAACATGTGCTTCTaGTACCCTTGTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLADNMCF*YPCFLS
Trigger: ACTGAGAAAACAAGGGTAGCAGAAGCACATGTTGTC...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAACAGAGGTGTTGGATaGTGCTCACCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVENRGVG*CSPPVF
Trigger: GAAGACTGGAGGTGAGCAGCATCCAACACCTCTGTT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCCTCATGCTCCCTCCTaGAGACCTGGAGTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLPHAPS*RPGVCL
Trigger: AAGGCACACTCCAGGTCTGCAGGAGGGAGCATGAGG...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp TCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTGGCTCCTTGAGGAAGTaGCCATTGATGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SFPEDRIQYKHASTSQNFGSLRK*PLMVWL
Trigger: CAACCAGACCATCAATGGCCACTTCCTCAAGGAGCC...AAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGTTATCCGTGCTCTCTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTVIRAL*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGAGAGCACGGATAAC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTTATCCGTGCTCTCTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVIRAL*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGAGAGCACGGATAAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360948.6
ENST00000394480.6
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSSSGL*VTVIGG
Trigger: ACCTCCTATCACTGTGACCCACAAACCAGAAGAAGA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAAAAGTGTCTTCTTCTaGTTTGTGGGTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVKSVFF*FVGHSD
Trigger: ATCACTGTGACCCACAAACCAGAAGAAGACACTTTT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCAAGTCCAACTGCTATaGATACCCCAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCQVQLL*IPQKCL
Trigger: AAGACACTTTTGGGGTATCCATAGCAGTTGGACTTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GACGTGAATGACTCAACACCAGATTCAATGGTCTCCTTCAGCCTTTTCCTCTCCCAAGTCCAACTGCTATaGATACCCCAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: DVNDSTPDSMVSFSLFLSQVQLL*IPQKCL
Trigger: AAGACACTTTTGGGGTATCCATAGCAGTTGGACTTG...GGAGAGGAAAAGGCTGAAGGAGACCATTGAATCTGGTGTTGAGTCATTCACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCTTCATTCCAAATTTaGACCGTCGACCATATTTGT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPSFQI*TVDHIC
Trigger: ACAAATATGGTCGACGGTCCAAATTTGGAATGAAGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGGCGTGGTGATGCCGTaGTTGATGTGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAGVVMP*LMWCSG
Trigger: CCCACTGCACCACATCAACCACGGCATCACCACGCC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATTGCATCTGGCCCATaGGCCCTGAGGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEIASGP*ALRNLF
Trigger: GAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGCTGTAGACATCTCTaGACATGCCGAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECCRHL*TCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTGCTGTAGACATCTCTaGACATGCCGAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTCCRHL*TCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATTGCTGTAGACATCTCTaGACATGCCGAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNCCRHL*TCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCA...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTCCAAAACACGACCTTaGGTAATGCACTCAATGACC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSKTRP*VMHSMT
Trigger: GGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTAATGTCCAGGTAGATTaGGGTGGCCTTCCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFNVQVD*GGLPQS
Trigger: GCTTTGGGGAAGGCCACCCCAATCTACCTGGACATT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGAATCCTCCCAGGGGCTaGAAACGTGAGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVNPPRG*KREENA
Trigger: GGCATTCTCCTCACGTTTCCAGCCCCTGGGAGGATT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTAGTCTTCTAGCAGGTTaGCTCCCTACCAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSSLLAG*LPTKAD
Trigger: GTCTGCTTTGGTAGGGAGCCAACCTGCTAGAAGACT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAACCACGGGTTCCAGATaGGATTTGTGGAGACACATC +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILTTGSR*DLWRHI
Trigger: GATGTGTCTCCACAAATCCCATCTGGAACCCGTGGT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACACAAATGGGGCATATaGATTTGTATACCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVHKWGI*ICIPVG
Trigger: TCCTACTGGTATACAAATCCATATGCCCCATTTGTG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGTGACTTTGGCATTCTaGCCTCAGGATTCATTATCA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTVTLAF*PQDSLS
Trigger: TGATAATGAATCCTGAGGCCAGAATGCCAAAGTCAC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGTACACCCTTCAGTCTaGCCTGAAGAATGCCACAAG +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILVHPSV*PEECHK
Trigger: CTTGTGGCATTCTTCAGGCCAGACTGAAGGGTGTAC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATCAAATTCCCAGCCTCTaGTCCACTATGCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNQIPSL*STMLRS
Trigger: TGACCTGAGCATAGTGGACCAGAGGCTGGGAATTTG...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 72 bp TCTGGGATTCACCTTGTATTAAGACTTTCGTGGAGTTaGAGAAGCTGGATTGTCAGTCCCATGGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SGIHLVLRLSWS*RSWIVSPMEAG
Trigger: TCCTGCTTCCATGGGACTGACAATCCAGCTTCTCAAACTCCACGAAAGTCTTAATACAAGGTGAATCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp TGTGTGCCGAATCATTCGGTCCAATTTTCTCACTGTTaGAAGTCCAAACTGTTTGTGGCTCTGGGATTCACC +
Preference number: 4 (lower is better)
Translates to: CVPNHSVQFSHC*KSKLFVALGFT
Trigger: GGTGAATCCCAGAGCCACAAACAGTTTGGACTTCAAACAGTGAGAAAATTGGACCGAATGATTCGGCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGAAGTGATATTCCTTaGGATGTCCGTGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGSDIP*DVRDVD
Trigger: ATCAACATCACGGACATCTCAAGGAATATCACTTCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCTATGTGTATGGAAGTaGTATTCCTTGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGLCVWK*YSLRCP
Trigger: CGGACATCTCAAGGAATATCACTTCCATACACATAG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAATGCTCCGAAGTCCTaGGTTCTTGATGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVENAPKS*VLDGQL
Trigger: AAGCTGACCATCAAGAACTCAGGACTTCGGAGCATT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAATRVW*AGYLTG
Trigger: ACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGTTCAGATTGGTCTGGTaGGTGTTGATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTEFRLVW*VLMDCS
Trigger: GCTGCAGTCCATCAACACTCACCAGACCAATCTGAA...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAAGTCAAGTTGATGGCATaGACATTGGTCCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQVKLMA*TLVQFR
Trigger: TCTGAACTGGACCAATGTTCATGCCATCAACTTGAC...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCTCACCAGCGTCAAGTTaGTGGCATGAACATTGGTCC +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVSPASS*WHEHWS
Trigger: GGACCAATGTTCATGCCATCAACTTGACGCTGGTGA...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTACTGGGGGTTCTCAATaGCAGGGATGCGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLTGGSQ*QGCESC
Trigger: GCATGACTCGCATCCCTGTCATTGAGAACCCCCAGT...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCATACCCGAGGCGATCTaGCTGGCAATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFIPEAI*LAMWSI
Trigger: AATGCTCCACATTGCCAGTCAGATCGCCTCGGGTAT...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACATACCCGAGGCGATCTaGCTGGCAATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNIPEAI*LAMWSI
Trigger: AATGCTCCACATTGCCAGTCAGATCGCCTCGGGTAT...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCACTTGAGTTTATATaGAGATGTTCGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCALEFI*RCSLQS
Trigger: TGACTGAAGCGAACATCTTCATATAAACTCAAGTGC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGTGTAGCAGGCACTTaGGTTTATATGAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCCVAGT*VYMKMF
Trigger: GAACATCTTCATATAAACTCAAGTGCCTGCTACACA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTAGAAAAATGGCACAGTaGCACAACGTTGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTRKMAQ*HNVVRI
Trigger: GATTCTGACAACGTTGTGTCACTGTGCCATTTTTCT...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCTCTATTCTAGTACACTaGCACTTGAACCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTSILVH*HLNQRQ
Trigger: CTGTCTTTGGTTCAAGTGTCAGTGTACTAGAATAGA...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTCGTATTCTAAAACCCTaGGGTAAGTTTCCAAAGACG +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVRILKP*GKFPKT
Trigger: CGTCTTTGGAAACTTACCTCAGGGTTTTAGAATACG...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAAGATTGCCTCCGTATaGTTTTTACCTTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCKIASV*FLPFSA
Trigger: GGCTGAAAAAGGTAAAAATCATACGGAGGCAATCTT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTATTCAAAAAGACAGACTaGGGCATTATAATAGGCTTG +
Preference number: 4 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVFKKTD*GIIIGL
Trigger: CAAGCCTATTATAATGCCTCAGTCTGTCTTTTTGAA...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCATTGACAGAACCTTATaGAAGCAAGAGTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTIDRTL*KQELMA
Trigger: TGCCATCAACTCTTGCTTTCATAAGGTTCTGTCAAT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACTTTCTCTACCTGGTaGGTTATTCCCCAAATGATA +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTFSTW*VIPQMI
Trigger: TATCATTTGGGGAATAACTCACCAGGTAGAGAAAGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTAGAAGGGGCAGATGGTaGGAAAGCATTGAAATAAGT +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVRRGRW*ESIEIS
Trigger: ACTTATTTCAATGCTTTCTCACCATCTGCCCCTTCT...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGGTAAAACTTTGCCATaGACTGCAACATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTGKTLP*TATWAS
Trigger: AGAGGCCCATGTTGCAGTTCATGGCAAAGTTTTACC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAATGAGTCTCCAAAATaGATAACAGCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTNESPK*ITAASL
Trigger: CAGTGATGCTGCTGTTATTCATTTTGGAGACTCATT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAATCACAAAGCAATGTaGCAACATGTGCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTNHKAM*QHVLLL
Trigger: TAGCAGAAGCACATGTTGTCACATTGCTTTGTGATT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTGTAGAGAGACGTGAATaGCTCAACACCAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: AFSSPFPRTESNISMLQRVERRE*LNTRFN
Trigger: ATTGAATCTGGTGTTGAGTCATTCACGTCTCTCTAC...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAACTGATCTTGAACTCCTaGCCTCGTGATCCATCCACC +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKLILNS*PRDPST
Trigger: GGTGGATGGATCACGAGGTCAGGAGTTCAAGATCAG...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGGACAATTGGCTGCCATaGTCCTGGCAATACACTGAA +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLDNWLP*SWQYTE
Trigger: TTCAGTGTATTGCCAGGATCATGGCAGCCAATTGTC...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAGTTGAAAAAGTTCTaGTCCAACTGCAATTCCCGA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGQLKKF*SNCNSR
Trigger: TCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCAGTTGAAAAAGTTCTaGTCCAACTGCAATTCCCGA +
Preference number: 4 (lower is better)
Translates to: AFSSPFPRTESNISMLQRQLKKF*SNCNSR
Trigger: TCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTG...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGTCTCTCCTCTTAATGTaGTGCACATACGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTESLLLM*CTYVSG
Trigger: GCCGGACACGTATGTGCAGCACATTAAGAGGAGAGA...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCTTGACAATGTGCTCATaGTGCAGGTTGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVLTMCS*CRLVSS
Trigger: GCTGCTCACCAACCTGCAGCATGAGCACATTGTCAA...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERHLWT*RSPQSS
Trigger: TGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNRHLWT*RSPQSS
Trigger: TGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCT...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTCAAAGATTGTCTCTCTaGATGGTCCAGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSQRLSL*MVQVFC
Trigger: GCAGAAGACCTGGACCATGCAGAGAGACAATCTTTG...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTACTATGGTCAGCAGTaGCTTTCAGAAAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGYYGQQ*LSERAI
Trigger: GATTGCTCTTTCTGAAAGGCACTGCTGACCATAGTA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGAGGCATCAGTTACATaGCAGGTAGCTATTAAATTG +
Preference number: 4 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLEASVT*QVAIKL
Trigger: CAATTTAATAGCTACCTGGCATGTAACTGATGCCTC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACCATAGGAAAGACCTaGACAAAAGACAAACACCTT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTIGKT*TKDKHL
Trigger: AAGGTGTTTGTCTTTTGTGCAGGTCTTTCCTATGGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCAGAAGATGCCATTTTaGTACAAAATGTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVQKMPF*YKMSEF
Trigger: GAACTCTGACATTTTGTAGCAAAATGGCATCTTCTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTATTTGGGTAAAACTTTaGCATGAACTGCAACATGGG +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAIWVKL*HELQHG
Trigger: CCCATGTTGCAGTTCATGGCAAAGTTTTACCCAAAT...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAAGATTGTAAACAGATaGACCATTGGGGTCTACAGT +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTKIVNR*TIGVYS
Trigger: ACTGTAGACCCCAATGGTGCATCTGTTTACAATCTT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTTGCAGACCTGGAGTGTaGCTTATGAATGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: SFPEDRIQYKHASTSQNFCRPGV*LMNVDS
Trigger: GCTGTCCACATTCATAAGGCACACTCCAGGTCTGCA...AAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACAGTATCAGTCCTCATaGCTGCACAACCCTGTAATA +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQQYQSS*LHNPVI
Trigger: TATTACAGGGTTGTGCAGGCATGAGGACTGATACTG...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCTCTGTGGCTGAGTCCTaGAGCTGGGAAAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVSVAES*SWESHF
Trigger: AAAGTGACTTTCCCAGCTGCAGGACTCAGCCACAGA...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGCTCTGTGTCTCAGGTTaGACTCATACTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTELCVSG*THTSPC
Trigger: GCAAGGGGAAGTATGAGTGCAACCTGAGACACAGAG...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACGGCTCCTTGAGGAAGTaGCCATTGATGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNGSLRK*PLMVWL
Trigger: CAACCAGACCATCAATGGCCACTTCCTCAAGGAGCC...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp CTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LFLSFPEDRIQYKHASTSSSSGL*VTVIGG
Trigger: ACCTCCTATCACTGTGACCCACAAACCAGAAGAAGA...AGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAAGTCCAACTGCTATaGATACCCCAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGQVQLL*IPQKCL
Trigger: AAGACACTTTTGGGGTATCCATAGCAGTTGGACTTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCCTTCATTCCAAATTTaGACCGTCGACCATATTTGT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCPSFQI*TVDHIC
Trigger: ACAAATATGGTCGACGGTCCAAATTTGGAATGAAGG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATACTCACTTCGTCAACTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNTHFVN*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGTTGACGAAGTGAGT...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTTGCTGTAGACATCTCTaGACATGCCGAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SFPEDRIQYKHASTSQNFCCRHL*TCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCA...AAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTATCCGTGTTTGAGAGTTaGAACCATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILSVFES*NHGCFP
Trigger: TGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGA...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCCGTGTTTGAGAGTTaGAACCATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESVFES*NHGCFP
Trigger: TGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTAGGTGGACTTTGGTATaGGAAAATGAGGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVRWTLV*ENEGEM
Trigger: CATTTCACCCTCATTTTCCCATACCAAAGTCCACCT...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTTGTACTCTCCCGGCATaGCTGACTCACTTCTACTTC +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFCTLPA*LTHFYF
Trigger: GAAGTAGAAGTGAGTCAGCCATGCCGGGAGAGTACA...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAATCAGAAATTTTGCTaGTCTTTTCACCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCNQKFC*SFHPAT
Trigger: AGTGGCAGGGTGAAAAGACCAGCAAAATTTCTGATT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAGCTAAATCCCAAGCTTaGTTGATGTGCAGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTAKSQA*LMCRLG
Trigger: TCCTAGCCTGCACATCAACCAAGCTTGGGATTTAGC...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCACCAAGCCAGAAGGATaGTTTGACTTCAAAAAGACA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTTKPEG*FDFKKT
Trigger: TGTCTTTTTGAAGTCAAACCATCCTTCTGGCTTGGT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTAGATATAAACCTCTCTaGTGCCATCACAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLARYKPL*CHHRKG
Trigger: ACCTTTTCTGTGATGGCACCAGAGAGGTTTATATCT...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATACAAATGCTGGTCCTaGCATGAACAGGGTACCACT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEYKCWS*HEQGTT
Trigger: AGTGGTACCCTGTTCATGCCAGGACCAGCATTTGTA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTATGAAGAATAGAGGGTaGGCACTTGCCTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVMKNRG*ALAFST
Trigger: TGTTGAAAAGGCAAGTGCCCACCCTCTATTCTTCAT...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGCTCAGAATTTTCTTATaGGGCATCTTCCCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLSFPEDRIQYKHASTSQLRIFL*GIFPVF
Trigger: AAAGACGGGGAAGATGCCCCATAAGAAAATTCTGAG...CTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAGCTGAGTCCTGCAGCTaGGAAAGTCACTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKAESCS*ESHFTL
Trigger: CAGGGTAAAGTGACTTTCCCAGCTGCAGGACTCAGC...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGACTCCTTTTCCATACCTaGGAATACTGGATAGGACAG +
Preference number: 4 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRLLFHT*EYWIGQ
Trigger: CTGTCCTATCCAGTATTCCCAGGTATGGAAAAGGAG...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 72 bp AGAGGAGTAATTGTCATAGGACAGCAAAGGAGTTCCTaGAGGTGGTCAATCCAAACAGCTTTCCTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RGVIVIGQQRSS*RWSIQTAFLQS
Trigger: ACTTTGCAGGAAAGCTGTTTGGATTGACCACCTCAAGGAACTCCTTTGCTGTCCTATGACAATTACTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp AGAGGCGATGTGACATGGTCTTCTAAAAGGTGGACTTaGGTATGGGAAAATGAGGGTGAAATGAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: RGDVTWSSKRWT*VWENEGEMNWS
Trigger: ACTCCAGTTCATTTCACCCTCATTTTCCCATACCAAAGTCCACCTTTTAGAAGACCATGTCACATCGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGAAGTCCTGAGTTCTTaGTGGTCAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEEVLSS*WSAFEV
Trigger: GACTTCAAAAGCTGACCATCAAGAACTCAGGACTTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGTCAAGTTGATGGCATaGACATTGGTCCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTVKLMA*TLVQFR
Trigger: TCTGAACTGGACCAATGTTCATGCCATCAACTTGAC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTTCACCAGCGTCAAGTTaGTGGCATGAACATTGGTCC +
Preference number: 4 (lower is better)
Translates to: FPEDRIQYKHASTSQNFLSPASS*WHEHWS
Trigger: GGACCAATGTTCATGCCATCAACTTGACGCTGGTGA...AAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp CTGGTGCACAGGTTTTTAATTCTCTTTATTGGCTCTAAAGATAGTGGCAGGAGCCCATGGAGTAAGGCATaGGTCAAAGCAAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LVHRFLILFIGSKDSGRSPWSKA*VKASKV
Trigger: TACTTTGCTTGCTTTGACTCATGCCTTACTCCATGG...GCTCCTGCCACTATCTTTAGAGCCAATAAAGAGAATTAAAAACCTGTGCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR TCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTATACCCGAGGCGATCTaGCTGGCAATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLIPEAI*LAMWSI
Trigger: AATGCTCCACATTGCCAGTCAGATCGCCTCGGGTAT...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATTTTGTAGATCTCCTTaGTGTTCAACCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEFCRSP*CSTAAV
Trigger: CACAGCAGCGGTTGAACATCAAGGAGATCTACAAAA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCACTTGAGTTTATATaGAGATGTTCGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGALEFI*RCSLQS
Trigger: TGACTGAAGCGAACATCTTCATATAAACTCAAGTGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGTGTAGCAGGCACTTaGGTTTATATGAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGCVAGT*VYMKMF
Trigger: GAACATCTTCATATAAACTCAAGTGCCTGCTACACA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAACCATGGCTACAATCTaGGCACAGCTCTTTACTATT +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISTMATI*AQLFTI
Trigger: AATAGTAAAGAGCTGTGCTCAGATTGTAGCCATGGT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGACTTTCGTGGAGTTTaGGAAGCTGGATTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFDFRGV*EAGLSV
Trigger: GACTGACAATCCAGCTTCTCAAACTCCACGAAAGTC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTAAAGCCTTAATTTCATaGGCTCCAAAGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTKALIS*APKCRK
Trigger: CTTTCTGCACTTTGGAGCTCATGAAATTAAGGCTTT...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTAACTTGAGCAATGGATaGGAAACAGATTGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSNLSNG*ETDWLA
Trigger: GGCAAGCCAATCTGTTTCTCATCCATTGCTCAAGTT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGCCAGAAGGATGGTTTaGCTTCAAAAAGACAGACTG +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILARRMV*LQKDRL
Trigger: CAGTCTGTCTTTTTGAAGTCAAACCATCCTTCTGGC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTCAGAGTTCCAAGCCTaGAAACAAACTCTAATTGTC +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSEFQA*KQTLIV
Trigger: GACAATTAGAGTTTGTTTTCAGGCTTGGAACTCTGA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATCTTTCAGCAAAGGCTaGTTTCAGGTGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKSFSKG*FQVTGL
Trigger: GAGGCCTGTCACCTGAAATCAGCCTTTGCTGAAAGA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAAAGAGCACTCAGGGTTaGAGGGTGGATGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKKSTQG*RVDAEN
Trigger: ATTCTCAGCATCCACCCTTCAACCCTGAGTGCTCTT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAACCCATAGATTCCGATaGAGACACATGTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILTHRFR*RHMFAL
Trigger: CAAGGCAAACATGTGTCTTCATCGGAATCTATGGGT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAGTAGAGAGACGTGAATaGCTCAACACCAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASVERRE*LNTRFN
Trigger: ATTGAATCTGGTGTTGAGTCATTCACGTCTCTCTAC...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCAAGGAGATCCTGTTATaGCACATCCGTAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFKEILL*HIRKGP
Trigger: AGGGCCCTTACGGATGTGTCATAACAGGATCTCCTT...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR GCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTAGGCTCTGGGCTGAATaGTCCGAAGTCCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLRLWAE*SEVLSS
Trigger: AGAACTCAGGACTTCGGAGCATTCAGCCCAGAGCCT...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp AGGCTTATTGGATTCAACATAATTTCTCTGAAACACGTGTCCGGCTTGTGGCAGATCCAAAGAGAACAATaGCTAGAGCTTCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: RLIGFNIISLKHVSGLWQIQREQ*LELPTS
Trigger: AGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGAT...CTGCCACAAGCCGGACACGTGTTTCAGAGAAATTATGTTGAATCCAATAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR GCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCATATTCTCTACTAGTGTaGAACACCACCCCAAAACAA +
Preference number: 4 (lower is better)
Translates to: YLASLDPKRTMPRASNLSYSLLV*NTTPKQ
Trigger: TTGTTTTGGGGTGGTGTTGCACACTAGTAGAGAATA...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR GCA 90 bp TTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTACTCCTCTTAATGTGCTaGACATACGTGTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: FPRTESNISMLQRLRIFLLLLMC*TYVSGL
Trigger: CAAGCCGGACACGTATGTGCAGCACATTAAGAGGAG...TAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAACTCCTCTTAATGTGCTaGACATACGTGTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKLLLMC*TYVSGL
Trigger: CAAGCCGGACACGTATGTGCAGCACATTAAGAGGAG...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATCTCTCCTCTTAATGTaGTGCACATACGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: FPRTESNISMLQRLRIFLSLLLM*CTYVSG
Trigger: GCCGGACACGTATGTGCAGCACATTAAGAGGAGAGA...TAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGCCTGTAATAATCCGTaGTGTAGACATCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEACNNP*CRHLWT
Trigger: TGTCCAGAGATGTCTACAGCACGGATTATTACAGGC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357724.6
ENST00000360948.6
ENST00000629765.2
CDS-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATGGAGGCAAGGACCCTaGTCAGGCATCATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKWRQGP*SGIISL
Trigger: CAAAGAAATGATGCCTGAGCAGGGTCCTTGCCTCCA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATCAAAGCCAGATTGTaGAGCTTCAGCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEIKARL*SFSQNS
Trigger: TGAGTTCTGGCTGAAGCTGCACAATCTGGCTTTGAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCAACAGGAGCATTGGTaGTTCACTTCTAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTQQEHW*FTSNQK
Trigger: CTTCTGGTTAGAAGTGAAGCACCAATGCTCCTGTTG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGCAGCAATCTGACAACTaGGGTCTCCTTCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVQQSDN*GLLQCF
Trigger: GAAGCACTGAAGGAGACCGCAGTTGTCAGATTGCTG...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGTTCTAATACCCAATaGAGTGACACAAACATTCAC +
Preference number: 4 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSSNTQ*SDTNIH
Trigger: GTGAATGTTTGTGTCACTGCATTGGGTATTAGAACT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCATGGAATCAACCCAAATaGCCATCAATCAATGAGCAG +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISWNQPK*PSINEQ
Trigger: CTGCTCATTGATTGATGGGCATTTGGGTTGATTCCA...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGTTTTCTGCTTTGTGTaGCGAATCATTCGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISVFCFV*RIIRSN
Trigger: ATTGGACCGAATGATTCGGCACACAAAGCAGAAAAC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTTGCAGCATTAAGATATaGTGTGAAACTGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTCSIKI*CETVIS
Trigger: GCTGATGACAGTTTCACAGCATATCTTAATGCTGCA...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTCTAGGATTTGGGGTATaGAGCTTTATTCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: RGPGGIRYNDLQATKSLALGFGV*SFILIS
Trigger: AGAAATCAGAATAAAGCTGCATACCCCAAATCCTAG...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTTTTCGAAAGCTGGGATaGTTTTTGTCTACTGAACAG +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVFRKLG*FLSTEQ
Trigger: CTGTTCAGTAGACAAAAAGCATCCCAGCTTTCGAAA...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCACAAGGAGTCATTTaGATTCTTATTGTGATTGTT +
Preference number: 4 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPQGVI*ILIVIV
Trigger: AACAATCACAATAAGAATGCAAATGACTCCTTGTGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGATCCCACTTAGCCAGTaGCGGCTGAGAGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVIPLSQ*RLRVEN
Trigger: ATTTTCCACTCTCAGCCGGCACTGGCTAAGTGGGAT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAAACCTGTAATAATCCGTaGTGTAGACATCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: SAFSSPFPRTESNISMLQTCNNP*CRHLWT
Trigger: TGTCCAGAGATGTCTACAGCACGGATTATTACAGGT...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558576.5
CDS-3UTR GCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAGCCTCTGGTCCACTATaGTCAGGTCAACAGGACAAT +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKASGPL*SGQQDN
Trigger: ATTGTCCTGTTGACCTGAGCATAGTGGACCAGAGGC...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGAAACTACACTTGGCTaGGCAAAGAGAGACATCCAT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEETTLG*AKRDIH
Trigger: ATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCGTTATCCGTGCTCTCTaGAAAGGGCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFVIRAL*KGLLEE
Trigger: TTCCTCAAGGAGCCCTTTCCAGAGAGCACGGATAAC...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESSSGL*VTVIGG
Trigger: ACCTCCTATCACTGTGACCCACAAACCAGAAGAAGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNSSSGL*VTVIGG
Trigger: ACCTCCTATCACTGTGACCCACAAACCAGAAGAAGA...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAAAAGTGTCTTCTTCTaGTTTGTGGGTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: FLSFPEDRIQYKHASTSQKSVFF*FVGHSD
Trigger: ATCACTGTGACCCACAAACCAGAAGAAGACACTTTT...CTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCTTCATTCCAAATTTaGACCGTCGACCATATTTGT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPSFQI*TVDHIC
Trigger: ACAAATATGGTCGACGGTCCAAATTTGGAATGAAGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCATTGCATCTGGCCCATaGGCCCTGAGGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFIASGP*ALRNLF
Trigger: GAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAAT...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCCAAAACACGACCTTaGGTAATGCACTCAATGACC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESKTRP*VMHSMT
Trigger: GGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACATGTCAGCTCTTGTCATaGTTTTGTGTTGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTCQLLS*FCVVGL
Trigger: CAACCCCACAACACAAAACCATGACAAGAGCTGACA...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGCAGTGGGGTTTACCTaGGACTCAGTAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAAVGFT*DSVETQ
Trigger: CTGGGTCTCTACTGAGTCCCAGGTAAACCCCACTGC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTACCCTGCAATTTCCATaGCCCTATTTTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFTLQFP*PYFLPP
Trigger: AGGAGGCAGAAAATAGGGCCATGGAAATTGCAGGGT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAATACTGCTGCTGTTTaGTTTGGAAAAGGGGAACAA +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGNTAAV*FGKGEQ
Trigger: TTGTTCCCCTTTTCCAAACCAAACAGCAGCAGTATT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCAATCACTGTACTTTaGAGTCAAGGTAATACTGCT +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGAITVL*SQGNTA
Trigger: AGCAGTATTACCTTGACTCCAAAGTACAGTGATTGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTTTTGGGACAGCTCTCTaGACTGCTGGCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAFGTAL*TAGRWV
Trigger: AACCCACCTGCCAGCAGTCCAGAGAGCTGTCCCAAA...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTAACCAACTTGAGCAATaGATGAGAAACAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTNQLEQ*MRNRLA
Trigger: AGCCAATCTGTTTCTCATCCATTGCTCAAGTTGGTT...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCACACGTATTTTTGTTaGCACTTGGGCCTATTAAAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGHTYFC*HLGLLK
Trigger: CTTTAATAGGCCCAAGTGCCAACAAAAATACGTGTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCATGAGGGTGAAGAATaGGGTGATGGGTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAHEGEE*GDGYGA
Trigger: GGCCCCATACCCATCACCCCATTCTTCACCCTCATG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATCCCTCCTGCAGACCTaGAGTGTGCCTTATGAATGT +
Preference number: 4 (lower is better)
Translates to: FPRTESNISMLQRLRIFLSLLQT*SVPYEC
Trigger: ACATTCATAAGGCACACTCCAGGTCTGCAGGAGGGA...TAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCAACCCTTCTGCCATATaGAGAAGACACAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVNPSAI*RRHSKQ
Trigger: CTGCTTGCTGTGTCTTCTCCATATGGCAGAAGGGTT...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 72 bp AAGGCAATATTTATGATGAAACCTGCAGTGACTGACTaGCCTTCCCAACACAGGATTCATCCTGACATGAGT +
Preference number: 4 (lower is better)
Translates to: KAIFMMKPAVTD*PSQHRIHPDMS
Trigger: ACTCATGTCAGGATGAATCCTGTGTTGGGAAGGCAAGTCAGTCACTGCAGGTTTCATCATAAATATTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp ACAAATAATCTAGAGAATCTTGTGCCATGGCCTTTTTaGCAGGGCAAGTGTGAGCACTGGAATGAGATTCAC +
Preference number: 4 (lower is better)
Translates to: TNNLENLVPWPF*QGKCEHWNEIH
Trigger: GTGAATCTCATTCCAGTGCTCACACTTGCCCTGCAAAAAAGGCCATGGCACAAGATTCTCTAGATTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGAAGTGATATTCCTTaGGATGTCCGTGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGSDIP*DVRDVD
Trigger: ATCAACATCACGGACATCTCAAGGAATATCACTTCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACTATGTGTATGGAAGTaGTATTCCTTGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELCVWK*YSLRCP
Trigger: CGGACATCTCAAGGAATATCACTTCCATACACATAG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGGAAGTCCTGAGTTCTTaGTGGTCAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: EDRIQYKHASTSQNFLMGEVLSS*WSAFEV
Trigger: GACTTCAAAAGCTGACCATCAAGAACTCAGGACTTC...CCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR TCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGGAAGTCCTGAGTTCTTaGTGGTCAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTEEVLSS*WSAFEV
Trigger: GACTTCAAAAGCTGACCATCAAGAACTCAGGACTTC...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTAAATCTTGTCGGTTTTaGCCCAGAGTTGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTKSCRF*PRVDFQ
Trigger: CTGGAAATCAACTCTGGGTCAAAACCGACAAGATTT...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTGTCATTAGTCATTCCTaGATAGAAAAGGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTVISHS*IEKDFG
Trigger: ACCAAAGTCCTTTTCTATTCAGGAATGACTAATGAC...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAACTTGTTTTCCTCTCTaGAAACCTAGGCTAAATCCC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVETCFPL*KPRLNP
Trigger: GGGATTTAGCCTAGGTTTTCAGAGAGGAAAACAAGT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACACTTTCACATTCAGAGTaGGAATTTTCTTGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTLSHSE*EFSCPN
Trigger: GTTGGGGCAAGAAAATTCTCACTCTGAATGTGAAAG...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTAAGGCTGATTTCAGGTaGCAGGCCTCAAAACATGTT +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFKADFR*QASKHV
Trigger: AACATGTTTTGAGGCCTGTCACCTGAAATCAGCCTT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGAGTGGAGAAGATGCTaGCAATTAGTTAAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISEWRRC*QLVKSR
Trigger: TCTACTCTTAACTAATTGTCAGCATCTTCTCCACTC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGGGATTCATCCTGACATaGGTGGAGAAGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVGFILT*VEKMLT
Trigger: TGTCAGCATCTTCTCCACTCATGTCAGGATGAATCC...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTATTGGGAAACACACATaGACACATGGGATCAGACAA +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSIGKHT*THGIRQ
Trigger: TTGTCTGATCCCATGTGTTCATGTGTGTTTCCCAAT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTAGGAGTAGAGAGACGTaGATGACTCAACACCAGATT +
Preference number: 4 (lower is better)
Translates to: SFPEDRIQYKHASTSQNFRSRET*MTQHQI
Trigger: AATCTGGTGTTGAGTCATTCACGTCTCTCTACTCCT...AAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTAAGGAGATCCTGTTATaGCACATCCGTAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLKEILL*HIRKGP
Trigger: AGGGCCCTTACGGATGTGTCATAACAGGATCTCCTT...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp TTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTAAAGGCCTTTTGCACTTaGGGAAGGAAAAGGAGATCC +
Preference number: 4 (lower is better)
Translates to: FPRTESNISMLQRLRIFLKAFCT*GRKRRS
Trigger: GGATCTCCTTTTCCTTCCTCAAGTGCAAAAGGCCTT...TAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp TTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTAAGGCCTTTTGCACTTaGGGAAGGAAAAGGAGATCC +
Preference number: 4 (lower is better)
Translates to: FPEDRIQYKHASTSQNFLKAFCT*GRKRRS
Trigger: GGATCTCCTTTTCCTTCCTCAAGTGCAAAAGGCCTT...AAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR TCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCGAATATGACATCCCTTaGCCTCCAAAACATTGTCCC +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVEYDIP*PPKHCP
Trigger: GGGACAATGTTTTGGAGGTCAAGGGATGTCATATTC...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAAAATGGTGTTAGGACGTaGGGCCTTTGGGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKNGVRT*GLWEVT
Trigger: AGTAACTTCCCAAAGGCCTCACGTCCTAACACCATT...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAGTTGAAAAAGTTCTaGTCCAACTGCAATTCCCGA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQLKKF*SNCNSR
Trigger: TCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR GCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATCAGTTGAAAAAGTTCTaGTCCAACTGCAATTCCCGA +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNQLKKF*SNCNSR
Trigger: TCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTG...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATAGCAGCAAGTCCAACTaGTATGGATACCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYSSKSN*YGYPKS
Trigger: ACTTTTGGGGTATCCATAGCAGTTGGACTTGCTGCT...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAGAAAGACACATCCTTTaGAACTCCAGCAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTERHIL*NSSKKL
Trigger: AAGCTTCTTGCTGGAGTTGCAAAGGATGTGTCTTTC...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTTTCATGCCTTAATTTaGAGTTCCCTCAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSFHALI*SSLRGN
Trigger: GTTTCCCCTGAGGGAACTGCAAATTAAGGCATGAAA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCATCTGTGTGTCATTGTaGTATATAAAAACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTICVSL*YIKTGQ
Trigger: TTGGCCAGTTTTTATATAGCACAATGACACACAGAT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AGTGAAGTCAGTAGTTATCAGCTTGGCATAATCAAACATCTGCCTTTCACAGAGGATGAGACAATTGGCTaGCATGATCCTGGCAATACA +
Preference number: 4 (lower is better)
Translates to: SEVSSYQLGIIKHLPFTEDETIG*HDPGNT
Trigger: TGTATTGCCAGGATCATGGCAGCCAATTGTCTCATC...CTCTGTGAAAGGCAGATGTTTGATTATGCCAAGCTGATAACTACTGACTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATCAACGGTACATCATCTaGCATTCTTTGGTTGCACAA +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNQRYII*HSLVAQ
Trigger: TTGTGCAACCAAAGAATGGCAGATGATGTACCGTTG...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAAGTCCAACTGCTATaGATACCCCAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQVQLL*IPQKCL
Trigger: AAGACACTTTTGGGGTATCCATAGCAGTTGGACTTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCATCCGGGAAGGCTTATTaGATTCAACATAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: YLASLDPKRTMPRASNLSSGKAY*IQHNFS
Trigger: AGAGAAATTATGTTGAATCCAATAAGCCTTCCCGGA...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTGTTGTTAAAGTCTTGTaGTTTTCTGTATCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTVVKVL*FSVSAA
Trigger: AGCTGCTGATACAGAAAACCACAAGACTTTAACAAC...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTCTGGAGTGGCCATATTaGCTAATAGGATGTCATTTC +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSLEWPY*LIGCHF
Trigger: GAAATGACATCCTATTAGCCAATATGGCCACTCCAG...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTAGCTCTCTGGACTGCTaGCAGGTGGGTTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPASSLDC*QVGSFN
Trigger: GTTGAATGAACCCACCTGCCAGCAGTCCAGAGAGCT...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGAAATGACTCCTGTGTaGTCATCTATCAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFEMTPV*SSIRQP
Trigger: TGGTTGCCTGATAGATGACCACACAGGAGTCATTTC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCACAGTGTCCTTGGCTaGAAACTTCCAATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFHSVLG*KLPILL
Trigger: TAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCGGAAGCGACACAAATaGGGCATATGGATTTGTATA +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTRKRHK*GIWICI
Trigger: TATACAAATCCATATGCCCCATTTGTGTCGCTTCCG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTAGAAACATTTCTCCGTaGGAATCCCACTCACACGTA +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFRNISP*ESHSHV
Trigger: TACGTGTGAGTGGGATTCCCACGGAGAAATGTTTCT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCAAGCTAATCCACCATaGCCCCCACATAAACAAGAA +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFQANPP*PPHKQE
Trigger: TTCTTGTTTATGTGGGGGCCATGGTGGATTAGCTTG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGCAGAATTTACACTCTaGGATGCGAGAAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEAEFTL*DARSKK
Trigger: TTTCTTGCTTCTCGCATCCCAGAGTGTAAATTCTGC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCTGCCCTTCCTAGTCTaGGAGGTCAATCAGGATAGC +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPALPFLV*EVNQDS
Trigger: GCTATCCTGATTGACCTCCCAGACTAGGAAGGGCAG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGCTCAGGGTTGAAGGGTaGATGCTGAGAATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVLRVEG*MLRIRE
Trigger: TTCTCTGATTCTCAGCATCCACCCTTCAACCCTGAG...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTACTTCCAGTTTTAGCTaGATGTTTAAAGGACACTTC +
Preference number: 4 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVTSSFS*MFKGHF
Trigger: GAAGTGTCCTTTAAACATCCAGCTAAAACTGGAAGT...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTCACCCCTCTAACCTGTaGCCATCTTATCAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFHPSNL*PSYQVR
Trigger: TCTAACTTGATAAGATGGCCACAGGTTAGAGGGGTG...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATGACACAGCAAGCAGATaGCCATCTATAAATGAGGAA +
Preference number: 4 (lower is better)
Translates to: MITHFSKDETIGCHDPGNDTASR*PSINEE
Trigger: TTCCTCATTTATAGATGGCCATCTGCTTGCTGTGTC...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAACTACCCAGCTTGCTGTaGACACTGTATGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKLPSLL*TLYALS
Trigger: AGACAAAGCATACAGTGTCCACAGCAAGCTGGGTAG...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 72 bp AAACTGTCATCAGCAGAGTGTTTTTCATGCCTTAATTaGCAGTTCCCTCAGGGGAAACCCAATACAATGACA +
Preference number: 4 (lower is better)
Translates to: KLSSAECFSCLN*QFPQGKPNTMT
Trigger: TGTCATTGTATTGGGTTTCCCCTGAGGGAACTGCAAATTAAGGCATGAAAAACACTCTGCTGATGACAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp GCCTCCACATCTGATAGAATTGGAGGAGCCTTTACTTaGGGATATGAATACAATCAATCTTTTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASTSDRIGGAFT*GYEYNQSFLAW
Trigger: CCAGGCTAGAAAAGATTGATTGTATTCATATCCCAAAGTAAAGGCTCCTCCAATTCTATCAGATGTGGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACGTCAAGTTGATGGCATaGACATTGGTCCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNVKLMA*TLVQFR
Trigger: TCTGAACTGGACCAATGTTCATGCCATCAACTTGAC...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGCACTTGAGTTTATATaGAGATGTTCGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEALEFI*RCSLQS
Trigger: TGACTGAAGCGAACATCTTCATATAAACTCAAGTGC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGCACTTGAGTTTATATaGAGATGTTCGCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTALEFI*RCSLQS
Trigger: TGACTGAAGCGAACATCTTCATATAAACTCAAGTGC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGTGTAGCAGGCACTTaGGTTTATATGAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECVAGT*VYMKMF
Trigger: GAACATCTTCATATAAACTCAAGTGCCTGCTACACA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACGTAGGTGCCATCATTaGTTCCCAAAAGCATCAAGA +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKRRCHH*FPKASR
Trigger: TCTTGATGCTTTTGGGAATCAATGATGGCACCTACG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTGTAAGATACTAAACTaGAAAGCAAGACCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSCKILN*KARPEC
Trigger: GCACTCAGGTCTTGCTTTTCAGTTTAGTATCTTACA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGTATGTTAAGAAACTaGGGTAAAGGGCAGACAATG +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECMLRN*GKGQTM
Trigger: CATTGTCTGCCCTTTACCTCAGTTTCTTAACATACA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAAATGACAGAATACTGTaGCTTTGGCATTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKNDRIL*LWHSGL
Trigger: GAGGCCAGAATGCCAAAGTCACAGTATTCTGTCATT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAATGCTTTTTGTCTACTaGACAGTAGTCCGAAACAGA +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILMLFVY*TVVRNR
Trigger: TCTGTTTCGGACTACTGTTCAGTAGACAAAAAGCAT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAAACAAGAAGAGTTCTTaGTGCTGTGAAGTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILNKKSS*CCEVRE
Trigger: TTCTCTCACTTCACAGCATCAAGAACTCTTCTTGTT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACCTCCAGATGCACACTaGGTCAAACATAGACTTGTA +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKPPDAH*VKHRLV
Trigger: TACAAGTCTATGTTTGACTCAGTGTGCATCTGGAGG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGACATCCTCCAGAACCATaGGAAATAAACTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRHPPEP*EINFSF
Trigger: AAAACTGAAGTTTATTTCTCATGGTTCTGGAGGATG...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATGTTTTAACGTCTGAGTaGTCTCATTTAGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYVLTSE*SHLGHQ
Trigger: CTGATGGCCTAAATGAGATCACTCAGACGTTAAAAC...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAATCAGACATAGTTTCCTaGGACTCCAGTGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKSDIVS*DSSEVS
Trigger: ACTGACTTCACTGGAGTCTCAGGAAACTATGTCTGA...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTTCTCTCCTCTTAATGTaGTGCACATACGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPASLLLM*CTYVSG
Trigger: GCCGGACACGTATGTGCAGCACATTAAGAGGAGAGA...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCCCCTGTAATAATCCGTaGTGTAGACATCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFPCNNP*CRHLWT
Trigger: TGTCCAGAGATGTCTACAGCACGGATTATTACAGGG...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR GCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAGCCATGATGAATCAGTaGCCTGAAGATAAAACCATA +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTAMMNQ*PEDKTI
Trigger: TATGGTTTTATCTTCAGGGCACTGATTCATCATGGC...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGACATTATCTCCTACTaGAAATGTCAAACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEDIISY*KCQTGS
Trigger: AGACCCAGTTTGACATTTGCAGTAGGAGATAATGTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGCAGAGTGTTTTTCATaGCTTAATTTGCAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTAECFS*LNLQFP
Trigger: AGGGAACTGCAAATTAAGGCATGAAAAACACTCTGC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTATAAACCTCTCTGGTaGCATCACAGAAAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSYKPLW*HHRKGF
Trigger: GAAACCTTTTCTGTGATGGCACCAGAGAGGTTTATA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTACTGCAAGTGATTGTTaGTTGGAGATCTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: CLGDGCAKISQITTKELTTASDC*LEIYEK
Trigger: TTTTTCATAGATCTCCAAGCAACAATCACTTGCAGT...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACAATGTGACAACATGTaGTTCTGCTACCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILQCDNM*FCYPCF
Trigger: AAAACAAGGGTAGCAGAAGCACATGTTGTCACATTG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAATGCCCTCACTCAGTTTaGAGAAGTTATCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKCPHSV*RSYLCV
Trigger: GACACAGAGATAACTTCTGCAAACTGAGTGAGGGCA...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACTTCAAGAAATTCTCCTaGTTCAACCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNFKKFS*FNLPSS
Trigger: GCTACTCGGGAGGTTGAAGCAGGAGAATTTCTTGAA...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGGCTGTGGACACTGTATaGTTTGTCTTATATTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLAVDTV*FVLYSL
Trigger: GAGAGAATATAAGACAAAGCATACAGTGTCCACAGC...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAAAAGTGTCTTCTTCTaGTTTGTGGGTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEKSVFF*FVGHSD
Trigger: ATCACTGTGACCCACAAACCAGAAGAAGACACTTTT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAAAAAGTGTCTTCTTCTaGTTTGTGGGTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTKSVFF*FVGHSD
Trigger: ATCACTGTGACCCACAAACCAGAAGAAGACACTTTT...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATCAAGTCCAACTGCTATaGATACCCCAAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYQVQLL*IPQKCL
Trigger: AAGACACTTTTGGGGTATCCATAGCAGTTGGACTTG...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCTTCATTCCAAATTTaGACCGTCGACCATATTTGT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPSFQI*TVDHIC
Trigger: ACAAATATGGTCGACGGTCCAAATTTGGAATGAAGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCATACATATATATCAGGTaGGACCAGAACCTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISYIYIR*DQNLAL
Trigger: TAAAGCTAGGTTCTGGTCCCACCTGATATATATGTA...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGCTGCTGTTTGGTTTaGAAAAGGGGAACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECCCLV*KRGTKK
Trigger: TTTCTTTGTTCCCCTTTTCCAAACCAAACAGCAGCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCAGATAAAGAAACTGTaGTACACACACACACACACA +
Preference number: 4 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTQIKKL*YTHTHT
Trigger: TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTATGCAATTGCAAAAAGTaGAATCAACCCAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILCNCKK*NQPKCP
Trigger: TGGGCATTTGGGTTGATTCCACTTTTTGCAATTGCA...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTTTACACGTCTTGTTaGGTTTTAGGGATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVYTSC*VLGMLH
Trigger: ATGCAACATCCCTAAAACCCAACAAGACGTGTAAAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTTTGGATGTAATCAATaGCCCTATTTTGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGFGCNQ*PYFAEK
Trigger: CTTTTCTGCAAAATAGGGCCATTGATTACATCCAAA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATTCCCCCTCAAGATTTaGATGCTGCTGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKFPLKI*MLLQIC
Trigger: ACAGATTTGCAGCAGCATCCAAATCTTGAGGGGGAA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAATTCAGAGCCTTGGATaGTACAGAGGCATTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILIQSLG*YRGIQN
Trigger: ATTTTGAATGCCTCTGTACCATCCAAGGCTCTGAAT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATTCCTCTCTCCAAAGTTaGCAACAGATAACATGCTTC +
Preference number: 4 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYSSLQS*QQITCF
Trigger: GAAGCATGTTATCTGTTGCCAACTTTGGAGAGAGGA...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAGGAAGTGATATTCCTTaGGATGTCCGTGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKGSDIP*DVRDVD
Trigger: ATCAACATCACGGACATCTCAAGGAATATCACTTCC...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGCTATGTGTATGGAAGTaGTATTCCTTGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVLCVWK*YSLRCP
Trigger: CGGACATCTCAAGGAATATCACTTCCATACACATAG...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACGTTCTAATTCAATTTaGGTGTCTGAGCTTCATATC +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILRSNSI*VSELHI
Trigger: GATATGAAGCTCAGACACTCAAATTGAATTAGAACG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGTTATATAGTGAAATaGGCTTGTTCAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESYIVK*ACSRKA
Trigger: AGCCTTCCTTGAACAAGCTCATTTCACTATATAACT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTACTTGATGCTGTGAAGTaGGAGAAAAATAACATGAGT +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILLDAVK*EKNNMS
Trigger: ACTCATGTTATTTTTCTCTCACTTCACAGCATCAAG...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCAATTTGTTTGCACCTTaGTCTTGGAATTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVNLFAP*SWNSHP
Trigger: AGGATGGGAATTCCAAGATCAAGGTGCAAACAAATT...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGATGAAGTATCTTGACTaGTCTGTTTTAACGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLMKYLD*SVLTSE
Trigger: CTCAGACGTTAAAACAGATCAGTCAAGATACTTCAT...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR TCA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACAGAAAGACTCCTCTTTaGTATTTTCTGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNRKTPL*YFLAGL
Trigger: CAGACCTGCCAGAAAATATCAAAGAGGAGTCTTTCT...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPARHLWT*RSPQSS
Trigger: TGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCT...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCATGCAGTAAAATTCACTaGACAGAGGTTAATCTAGAT +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISCSKIH*TEVNLD
Trigger: ATCTAGATTAACCTCTGTGCAGTGAATTTTACTGCA...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGGCAAGGAATTAAATaGAGCAGAAGATGCCATTTT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEWQGIK*SRRCHF
Trigger: AAAATGGCATCTTCTGCTGCATTTAATTCCTTGCCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACAGTACACAAATCTTTaGCAGAGAGAAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKQYTNL*QREEHC
Trigger: GCAGTGTTCTTCTCTCTGGCAAAGATTTGTGTACTG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGGGAACAGTTAATGCGTaGCAAAGTACTGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVGTVNA*QSTDVV
Trigger: TACCACATCAGTACTTTGGCACGCATTAACTGTTCC...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAAAAGATAGAACTGACCTaGACACACCTCAAATTCCCA +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKKIELT*THLKFP
Trigger: TGGGAATTTGAGGTGTGTGCAGGTCAGTTCTATCTT...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCCTTCATTCCAAATTTaGACCGTCGACCATATTTGT +
Preference number: 4 (lower is better)
Translates to: SFPEDRIQYKHASTSQNFPSFQI*TVDHIC
Trigger: ACAAATATGGTCGACGGTCCAAATTTGGAATGAAGG...AAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACATGGTTTTGTGTTGTaGGGTTGTCTGTTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKHGFVL*GCLFCV
Trigger: AACACAGAACAGACAACCCCACAACACAAAACCATG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACATGGTCTTCTAAAAGGTaGACTTTGGTATGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTWSSKR*TLVWEN
Trigger: ATTTTCCCATACCAAAGTCCACCTTTTAGAAGACCA...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGATAGCCAAGCTCACTaGTTCAAGACATTATCTCCT +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKDSQAH*FKTLSP
Trigger: AGGAGATAATGTCTTGAACCAGTGAGCTTGGCTATC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTATCTTTTGTCCCAGTTaGGAGAAACAGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAIFCPS*EKQELW
Trigger: CCACAGCTCCTGTTTCTCCCAACTGGGACAAAAGAT...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGGCCTATTAAAGGTGTaGTCTAGCATTTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKGLLKV*SSICSS
Trigger: TGAAGAGCAAATGCTAGACCACACCTTTAATAGGCC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGGCTCTATTATTTGTCTaGCCCTGTACAGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVALLFV*PCTVHL
Trigger: AAGGTGAACTGTACAGGGCCAGACAAATAATAGAGC...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGAGGAGCCTTTACTTTaGGATATGAATACAATCAAT +
Preference number: 4 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISEEPLL*DMNTIN
Trigger: ATTGATTGTATTCATATCCCAAAGTAAAGGCTCCTC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGAATGGAAGGAATGGATaGCTACATCTTAGACCCACT +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVNGRNG*LHLRPT
Trigger: AGTGGGTCTAAGATGTAGCCATCCATTCCTTCCATT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCTCATCTGCCATTCTTTaGTTGCACAACAAACAAGTC +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVSSAIL*LHNKQV
Trigger: GACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGA...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
3UTR CAA 72 bp CTTCAGTCTGGCCTGAAGAATGCCACAAGGAGTCATTaGCATTCTTATTGTGATTGTTTAAGGCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: LQSGLKNATRSH*HSYCDCLRQKQ
Trigger: CTGTTTTTGCCTTAAACAATCACAATAAGAATGCAAATGACTCCTTGTGGCATTCTTCAGGCCAGACTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGGTGAGCCGGTTACTTaGCAGGTTTATATAACGCAA +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAGEPVT*QVYITQ
Trigger: TTGCGTTATATAAACCTGTCAAGTAACCGGCTCACC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGATCCTAATAATGCACTaGAGTAGGTACCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVILIMH*SRYQLI
Trigger: AATCAGCTGGTACCTACTTCAGTGCATTATTAGGAT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAAGAAGGAGTGGGCAATTaGGAACATAATAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKEGVGN*EHNKQV
Trigger: TACCTGTTTATTATGTTCTCAATTGCCCACTCCTTC...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCCCTGTAATAATCCGTaGTGTAGACATCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAPCNNP*CRHLWT
Trigger: TGTCCAGAGATGTCTACAGCACGGATTATTACAGGG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCAAGTCTCTTGCTATTaGAACCCTAAAGCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAQVSCY*NPKACC
Trigger: ACAGCACGCTTTAGGGTTGCAATAGCAAGAGACTTG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAGAAATGAAAGTTTTCTaGTTTGTGTGCCGAATCATT +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTEMKVF*FVCRII
Trigger: AATGATTCGGCACACAAAGCAGAAAACTTTCATTTC...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAACTTTCCATCTGTTTTaGCATTTTATCCTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LCHELQHGPLNSSPFLILTFHLF*HFILES
Trigger: GCTTTCTAGGATAAAATGGCAAAACAGATGGAAAGT...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACAGGAAATAGAAATGTaGAAGTTCTCTGCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKQEIEM*KFSASY
Trigger: ATAGGAGGCAGAGAACTTGCACATTTCTATTTCCTG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAAAATGCAGCAGAAGATaGCATTTTGCTACAAAATGT +
Preference number: 4 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTKCSRR*HFATKC
Trigger: ACATTTTGTAGCAAAATGGCATCTTCTGCTGCATTT...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAGTGTGGTCTAGCATTTaGTCTTCACTCATCTTAAGA +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKVWSSI*SSLILR
Trigger: TCTTAAGATGAGTGAAGAGCAAATGCTAGACCACAC...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAACAGGTATGTCAAGATaGAAGAGAGGCCAAAAGATA +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKTGMSR*KRGQKI
Trigger: TATCTTTTGGCCTCTCTTGCATCTTGACATACCTGT...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAATTCATATGGAAGAGATaGCAGAGAGATCTGTTAACC +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKFIWKR*QRDLLT
Trigger: GGTTAACAGATCTCTCTGGCATCTCTTCCATATGAA...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCCTGCCATTCTTTGGTTaGACAACAAACAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: HSWPFILSLEIITLSESVLPFFG*TTNKSF
Trigger: AAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAG...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPASSSGL*VTVIGG
Trigger: ACCTCCTATCACTGTGACCCACAAACCAGAAGAAGA...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAAAAAGTGTCTTCTTCTaGTTTGTGGGTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKKSVFF*FVGHSD
Trigger: ATCACTGTGACCCACAAACCAGAAGAAGACACTTTT...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAACCTTCATTCCAAATTTaGACCGTCGACCATATTTGT +
Preference number: 4 (lower is better)
Translates to: LICLHLDLGIPILQNHEKPSFQI*TVDHIC
Trigger: ACAAATATGGTCGACGGTCCAAATTTGGAATGAAGG...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGATAAAACCATAGCATaGTCCTTATTCCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFDKTIA*SLFPVF
Trigger: GAAAACTGGGAATAAGGACCATGCTATGGTTTTATC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTTCGACAGTGCTTTTCTaGTATGTAGGAATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPASTVLF*YVGMPG
Trigger: TCCTGGCATTCCTACATACCAGAAAAGCACTGTCGA...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGTATTAAGACTTTCGTaGAGTTTGAGAAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: HCSAVAISQLTLQIANIFVLRLS*SLRSWI
Trigger: AATCCAGCTTCTCAAACTCCACGAAAGTCTTAATAC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGAACTGTTTGTGGCTCTaGGATTCACCTTGTATTAAG +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVNCLWL*DSPCIK
Trigger: CTTAATACAAGGTGAATCCCAGAGCCACAAACAGTT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGAATTTTCTAGGATTTaGGGTATGCAGCTTTATTCT +
Preference number: 4 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEEFSRI*GMQLYS
Trigger: AGAATAAAGCTGCATACCCCAAATCCTAGAAAATTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAAGTGGTAACCCAATTTaGACTCTCATTTCGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKSGNPI*TLISKA
Trigger: AGCTTTCGAAATGAGAGTCCAAATTGGGTTACCACT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTGTGCTATATAAAAACTaGCCAATCACAAAGCAATGT +
Preference number: 4 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSVLYKN*PITKQC
Trigger: ACATTGCTTTGTGATTGGCCAGTTTTTATATAGCAC...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCTCAGAATTTTCTTATaGGGCATCTTCCCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: RIQYKHASTSQNFLMGHLLRIFL*GIFPVF
Trigger: AAAGACGGGGAAGATGCCCCATAAGAAAATTCTGAG...AAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
3UTR CAA 72 bp AGCCTTGTCTTTAGGAAGTTATATAGTGAAATGAGCTaGTTCAAGGAAGGCTTTAACAGTACTGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLVFRKLYSEMS*FKEGFNSTVKE
Trigger: CTCCTTCACAGTACTGTTAAAGCCTTCCTTGAACAAGCTCATTTCACTATATAACTTCCTAAAGACAAGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAATTCAATTTGAGTGTCTaGGCTTCATATCTGACTACT +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKFNLSV*ASYLTT
Trigger: AGTAGTCAGATATGAAGCTCAGACACTCAAATTGAA...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGATTGTCCCTTTCCAGTaGCTAAGCCAAATAGATAAA +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVIVPFQ*LSQIDK
Trigger: TTTATCTATTTGGCTTAGTCACTGGAAAGGGACAAT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCCTTCAGATGCTCCCTaGAAAATTAGTTATACCACC +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAPSDAP*KISYTT
Trigger: GGTGGTATAACTAATTTTTCAGGGAGCATCTGAAGG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGATGGTGAGAAAGCATTaGAATAAGTTCTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVMVRKH*NKFLLC
Trigger: GCACAACAAGAACTTATTTCAATGCTTTCTCACCAT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR TCA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAAGAAAGACAGACATATaGCCAAGGAGTATTTACAAC +
Preference number: 4 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKRKTDI*PRSIYN
Trigger: GTTGTAAATACTCCTTGGTCATATGTCTGTCTTTCT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCAGTTGAAAAAGTTCTaGTCCAACTGCAATTCCCGA +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAQLKKF*SNCNSR
Trigger: TCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR GCA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGACACTTCATTGCAAATaGATGCACACAAAGATCAAC +
Preference number: 4 (lower is better)
Translates to: SMALFCRKVAISALRFYVTLHCK*MHTKIN
Trigger: GTTGATCTTTGTGTGCATGCATTTGCAATGAAGTGT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTAAAGATACTGATGGCTaGGAGAACGCACTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAKDTDG*ENALVF
Trigger: GAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTT...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp ATTATCAGACTTGGACTTCAGTGTTTACACGTCTTGTaGGGTTTTAGGGATGTTGCATGTAAAAGAATGTCA +
Preference number: 4 (lower is better)
Translates to: IIRLGLQCLHVL*GFRDVACKRMS
Trigger: TGACATTCTTTTACATGCAACATCCCTAAAACCCAACAAGACGTGTAAACACTGAAGTCCAAGTCTGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp AATAACATGAATCTTCCCCCAACAGTACACAAATCTTaGCCAGAGAGAAGAACACTGCTATTTTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: NNMNLPPTVHKS*PERRTLLFSFT
Trigger: TGTGAAAGAAAATAGCAGTGTTCTTCTCTCTGGCAAAGATTTGTGTACTGTTGGGGGAAGATTCATGTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp GAGACTGAAGGACATGCACAATGGGAGAAACAACCTTaGGTGATACCATTAAATCATCCTTTTGTATTAAAC +
Preference number: 4 (lower is better)
Translates to: ETEGHAQWEKQP*VIPLNHPFVLN
Trigger: GTTTAATACAAAAGGATGATTTAATGGTATCACCAAAGGTTGTTTCTCCCATTGTGCATGTCCTTCAGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp TATATTCTCTCACAACGGTACATCATCTGCCATTCTTaGGTTGCACAACAAACAAGTCATTTTCTAACAACC +
Preference number: 4 (lower is better)
Translates to: YILSQRYIICHS*VAQQTSHFLTT
Trigger: GGTTGTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGTTGTGAGAGAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR GCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTTTCTCCAAAGGCAAATaGAGTCATCATTTTAACGAG +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAFSKGK*SHHFNE
Trigger: CTCGTTAAAATGATGACTGCATTTGCCTTTGGAGAA...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
3UTR CAA 72 bp ATAATTATCAGACTTGGACTTCAGTGTTTACACGTCTaGTTGGGTTTTAGGGATGTTGCATGTAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: IIIRLGLQCLHV*LGFRDVACKRM
Trigger: CATTCTTTTACATGCAACATCCCTAAAACCCAACAAGACGTGTAAACACTGAAGTCCAAGTCTGATAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CCA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTGGGTTTACAAGTCAGTaGTATGTTATAAAGACTTGT +
Preference number: 4 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAGFTSQ*YVIKTC
Trigger: ACAAGTCTTTATAACATACCACTGACTTGTAAACCC...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS GCA 90 bp GCCGCCGCCGGGTGGGAGCCGCGAGGAGCGCCTAGTGGCGCGGTCTaGCGGGCATGGTGGCCGGCTCGGCGATCGCTGACTCGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: AAAGWEPRGAPSGAV*RAWWPARRSLTRRV
Trigger: GACCCGGCGAGTCAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGGCGCTCCTCGCGGCTCCCACCCGGCGGCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS CCA 90 bp TCTGAAACCATCGCGGACGCCGCCGCCGCCGCCGCCGCCGCCGGGTaGGAGCCGCGAGGAGCGCCTAGTGGCGCGGTCTGCCGGGCATGG +
Preference number: 5 (lower is better)
Translates to: SETIADAAAAAAAAG*EPRGAPSGAVCRAW
Trigger: CCATGCCCGGCAGACCGCGCCACTAGGCGCTCCTCGCGGCTCCCACCCGGCGGCGGCGGCGGCGGCGGCGGCGTCCGCGATGGTTTCAGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS CCA 90 bp GGGTGGGAGCCGCGAGGAGCGCCTAGTGGCGCGGTCTGCCGGGCATaGTGGCCGGCTCGGCGATCGCTGACTCGCCGGGTCCGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GWEPRGAPSGAVCRA*WPARRSLTRRVRGL
Trigger: GAGCCCCCGGACCCGGCGAGTCAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGGCGCTCCTCGCGGCTCCCACCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS CCA 90 bp TGGGAGCCGCGAGGAGCGCCTAGTGGCGCGGTCTGCCGGGCATGGTaGCCGGCTCGGCGATCGCTGACTCGCCGGGTCCGGGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: WEPRGAPSGAVCRAW*PARRSLTRRVRGLW
Trigger: CCAGAGCCCCCGGACCCGGCGAGTCAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGGCGCTCCTCGCGGCTCCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS TCA 90 bp CTAGTGGCGCGGTCTGCCGGGCATGGTGGCCGGCTCGGCGATCGCTaGCTCGCCGGGTCCGGGGGCTCTGGAAGCGAGGCGCGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: LVARSAGHGGRLGDR*LAGSGGSGSEARSP
Trigger: CGGAGAGCGCGCCTCGCTTCCAGAGCCCCCGGACCCGGCGAGTCAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGCGCCACTAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS CCA 90 bp TGGTGGCCGGCTCGGCGATCGCTGACTCGCCGGGTCCGGGGGCTCTaGAAGCGAGGCGCGCTCTCCGACTCCGAGACCGGAGCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: WWPARRSLTRRVRGL*KRGALSDSETGARG
Trigger: TCCTCGGGCTCCGGTCTCGGAGTCGGAGAGCGCGCCTCGCTTCCAGAGCCCCCGGACCCGGCGAGTCAGCGATCGCCGAGCCGGCCACCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS GCA 90 bp GACCGGAGCCCGAGGAAAGGAAGAGAAGGAAGATGCAGTAGGAGCTaGAGCAGCCGCCGCGAATGGCTCGCCGCGCGGCTGCAGAAATGT +
Preference number: 5 (lower is better)
Translates to: DRSPRKGREGRCSRS*SSRREWLAARLQKC
Trigger: ACATTTCTGCAGCCGCGCGGCGAGCCATTCGCGGCGGCTGCTGCAGCTCCTACTGCATCTTCCTTCTCTTCCTTTCCTCGGGCTCCGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS GCA 90 bp GCAGTAGGAGCTGCAGCAGCCGCCGCGAATGGCTCGCCGCGCGGCTaGAGAAATGTACAAGTGCTCCGAGCCTTACGAAACGCACGGGTT +
Preference number: 5 (lower is better)
Translates to: AVGAAAAAANGSPRG*RNVQVLRALRNARV
Trigger: AACCCGTGCGTTTCGTAAGGCTCGGAGCACTTGTACATTTCTGCAGCCGCGCGGCGAGCCATTCGCGGCGGCTGCTGCAGCTCCTACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559067.1
CDS TCA 90 bp GATGCGAGTCATGCCAATGACCACAGTGTCGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCCGTGGTTGATGTGGTGCAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: DASHANDHSVGPGIQ*RGRGDAVVDVVQWA
Trigger: AGCCCACTGCACCACATCAACCACGGCATCACCACGCCCTCGTCACTGGATGCCGGGCCCGACACTGTGGTCATTGGCATGACTCGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558306.1
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS GCA 90 bp TCCGTGATGTTGATACTGGCGTTCCCATTGCTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAGAGGTTCCCATCGTCCGGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: SVMLILAFPLLFPES*PSRRGKRFPSSGRR
Trigger: CCGGCGGCCGGACGATGGGAACCTCTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTATCAACATCACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS GCA 90 bp AATAAGGACTGCCAGGCTGAGGAGCAAGAGAGGGAAAGCGGGCAGTaGTGGCTGGGCCACAGCAGGAAGCCATCATGGGCCAATCCGGAG +
Preference number: 5 (lower is better)
Translates to: NKDCQAEEQERESGQ*WLGHSRKPSWANPE
Trigger: CTCCGGATTGGCCCATGATGGCTTCCTGCTGTGGCCCAGCCAGCACTGCCCGCTTTCCCTCTCTTGCTCCTCAGCCTGGCAGTCCTTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS GCA 90 bp GGATTAAAGAGTGTGGAAGCTGCCGTTGCTGCTAGCCTCTGCCGCTaGCACACCACACTGAACGGGCCCTTCTGGCATGGCCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: GLKSVEAAVAASLCR*HTTLNGPFWHGPSL
Trigger: CAGGGAAGGGCCATGCCAGAAGGGCCCGTTCAGTGTGGTGTGGCAGCGGCAGAGGCTAGCAGCAACGGCAGCTTCCACACTCTTTAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS-3UTR CAA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGCTTCCCCACTGGAGGTaGCAGGGCGACGAGGTCACT +
Preference number: 5 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRLPHWR*QGDEVT
Trigger: AGTGACCTCGTCGCCCTGCAACCTCCAGTGGGGAAG...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS GCA 90 bp CCAGATGGATTAAAGAGTGTGGAAGCTGCCGTTGCTGCTAGCCTCTaGCGCTGCCACACCACACTGAACGGGCCCTTCTGGCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: PDGLKSVEAAVAASL*RCHTTLNGPFWHGP
Trigger: AGGGCCATGCCAGAAGGGCCCGTTCAGTGTGGTGTGGCAGCGGCAGAGGCTAGCAGCAACGGCAGCTTCCACACTCTTTAATCCATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS CCA 90 bp AATGTGGAGCATTTGGGAGAGCCCCAGCTCACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGATCATTGCATCTGGCCCATGGGCCCT +
Preference number: 5 (lower is better)
Translates to: NVEHLGEPQLTLGLA*LSIHKDHCIWPMGP
Trigger: AGGGCCCATGGGCCAGATGCAATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CCA 90 bp CTGGCAATGTGGAGCATTTGGGAGAGCCCCAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACAAGGATCATTGCATCTGGCCCATGG +
Preference number: 5 (lower is better)
Translates to: LAMWSIWESPSSPLA*RGCPSTRIIASGPW
Trigger: CCATGGGCCAGATGCAATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GAGGCCCTGGACCCAAAGCATCAGCAGGGCACAATGGGGAACAGCCTGACATGGACCCCATGGAGGCATTaGCAGAATCGGGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: EALDPKHQQGTMGNSLTWTPWRH*QNRAGI
Trigger: GATCCCAGCCCGATTCTGCAAATGCCTCCATGGGGT...CCATGTCAGGCTGTTCCCCATTGTGCCCTGCTGATGCTTTGGGTCCAGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGTCCTTAAAGCCACACTaGGGAGGAGGCCCTGGACCC +
Preference number: 5 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGSLKPH*GGGPGP
Trigger: GGGTCCAGGGCCTCCTCCCAAGTGTGGCTTTAAGGA...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS TCA 90 bp CTTCCAGGAGGGGGAAGAGGTTCCCATCGTCCGGCCGCCGGCAATTaGTCTCAGTCTTGCTGCAGACACAATTTGCAGGGCAAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LPGGGRGSHRPAAGN*SQSCCRHNLQGKPA
Trigger: TGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGACGATGGGAACCTCTTCCCCCTCCTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS CCA 90 bp TCTGACTGGCAATGTGGAGCATTTGGGAGAGCCCCAGCTCACCCTTaGCCTGGCGTGGCTGTCCATCCACAAGGATCATTGCATCTGGCC +
Preference number: 5 (lower is better)
Translates to: SDWQCGAFGRAPAHP*PGVAVHPQGSLHLA
Trigger: GGCCAGATGCAATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCCAGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GAAACACGTGTCCGGCTTGTGGCAGTTGTGTCCCTGACGGAAGTACTGGGGGTTGTGGTGATGCCGTGGTaGATGTGGTGCAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: ETRVRLVAVVSLTEVLGVVVMPW*MWCSGL
Trigger: CAGCCCACTGCACCACATCAACCACGGCATCACCAC...AACCCCCAGTACTTCCGTCAGGGACACAACTGCCACAAGCCGGACACGTGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558306.1
CDS-3UTR CAA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACAAGCGAGCCCCCTCTTaGGGAGAGGGTGGCCATGGA +
Preference number: 5 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDKRAPS*GEGGHG
Trigger: TCCATGGCCACCCTCTCCCAAAGAGGGGGCTCGCTT...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS GCA 90 bp CATCCATCTCCGATCGCTGCTTCTTTGAAACGCCGAGCGATCAGATaGAAAATCCTTCAGCGTCTGAAACCATCGCGGACGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: HPSPIAASLKRRAIR*KILQRLKPSRTPPP
Trigger: CGGCGGCGGCGTCCGCGATGGTTTCAGACGCTGAAGGATTTTGCATCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCGGAGATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
CDS GCA 90 bp TGGCTGGGCCACAGCAGGAAGCCATCATGGGCCAATCCGGAGTTATaGGTGTTCTTTTTCCTGGCAGCCCAGCATCAGCCCAGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: WLGHSRKPSWANPEL*VFFFLAAQHQPSQD
Trigger: GTCTTGACTGGGCTGATGCTGGGCTGCCAGGAAAAAGAACACGCATAACTCCGGATTGGCCCATGATGGCTTCCTGCTGTGGCCCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGCCCCAGCTCACCCTaGGCCTGGCGTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSPSSP*AWRGCP
Trigger: TGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: SSPAEEICGARLLASMFHGNVEH*GEPQLT
Trigger: GGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGAGGATCCGGTGAGGTaGGCATGGCAGAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: SSPAEEICGARLLASMFHEDPVR*AWQRDQ
Trigger: CTGGTCTCTCTGCCATGCCAACCTCACCGGATCCTC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS TCA 90 bp GGCAGCCCTCGGAAATCTCTCCCTCTTGGTAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAGGCTGCCCATTGTGCAGCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GSPRKSLPLGSIPHG*SWTPAEAAHCAASA
Trigger: TGCACTGGCTGCACAATGGGCAGCCTCTGCGGGAGTCCAAGATCATCCATGTGGAATACTACCAAGAGGGAGAGATTTCCGAGGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS GCA 90 bp ATCCGCCAGAAACTACACTTGGCTTTGAAACGCCGAGCGATCAGATaGAAAATCCTTCAGCGTCTGAAACCATCGCGGACGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: IRQKLHLALKRRAIR*KILQRLKPSRTPPP
Trigger: CGGCGGCGGCGTCCGCGATGGTTTCAGACGCTGAAGGATTTTGCATCTGATCGCTCGGCGTTTCAAAGCCAAGTGTAGTTTCTGGCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559067.1
CDS-3UTR CAA 90 bp AGGGTGCCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCATACTGGCGTTCCCATaGCTGTTCCCTGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: RVPGHWWLMQFLLSIPGSILAFP*LFPESC
Trigger: GCAGGATTCAGGGAACAGCAATGGGAACGCCAGTAT...GGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCTCTCGTACGGTCAGGTaGACGTGGCTCACGCTGATC +
Preference number: 5 (lower is better)
Translates to: TMPRASNLSEGPAYQGDISRTVR*TWLTLI
Trigger: GATCAGCGTGAGCCACGTCAACCTGACCGTACGAGA...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCCGCAGAGGCTGCCCATaGTGCAGCCAGTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTARRGCP*CSQCSV
Trigger: AACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCG...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTAGCCCCAGCTCACCCTaGGCCTGGCGTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLASPSSP*AWRGCP
Trigger: TGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCT...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGTGGGGAGAGGAGGGTaGCTGAGGGTGGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTVGRGG*LRVGHH
Trigger: GTGGTGGCCCACCCTCAGCAACCCTCCTCTCCCCAC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTTGTCGGTGCTGCAGACACAATTaGCAGGGCAAGCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: PSRMASSWVKPPAAKACRCCRHN*QGKPAR
Trigger: CCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCA...CCGACAAGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATCCGGCCGCCGGCAATaGATCTCAGTCTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LVGFDPELISSGLHERWASGRRQ*ISVLLQ
Trigger: CTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCTCCGGCCGCCGGCAATaGATCTCAGTCTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTASGRRQ*ISVLLQ
Trigger: CTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGA...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp AGGGTGCCGGGGCACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCGGTGATCCAGAGCCATaGCAAGTGATAACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: RVPGHWWLMQFLLSIPGSGDPEP*QVITAL
Trigger: CAACGCTGTTATCACTTGCAATGGCTCTGGATCACC...GGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTGCCCCGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCGCAGAGGCTGCCCATaGTGCAGCCAGTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRRGCP*CSQCSV
Trigger: AACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TGTGGTCCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTGTGGTGATGCCGTGGTaGATGTGGTGCAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: CGPSRMASSWVKPPAAKAVVMPW*MWCSGL
Trigger: CAGCCCACTGCACCACATCAACCACGGCATCACCAC...AGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCGTGGTGATGCCGTGGTaGATGTGGTGCAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAVVMPW*MWCSGL
Trigger: CAGCCCACTGCACCACATCAACCACGGCATCACCAC...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TTAGGTGGGCAGCCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTGGTTGTCCCTGATTCCCTaGGTCCCTTGTGGTCCTAGT +
Preference number: 5 (lower is better)
Translates to: LGGQPMLTSYNGGPMGQWLSLIP*VPCGPS
Trigger: ACTAGGACCACAAGGGACCAAGGGAATCAGGGACAA...CCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCACCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGCCCCAGCTCACCCTaGGCCTGGCGTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSPSSP*AWRGCP
Trigger: TGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACATCGTACACCTCTTaGGGGCAGACTCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVTSYTS*GQTRGR
Trigger: GCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATTGTGGGGCCAGGCTGTaGGCTTCCATGTTTCATGTG +
Preference number: 5 (lower is better)
Translates to: SSPAEEICGARLLASMFHCGARL*ASMFHV
Trigger: CACATGAAACATGGAAGCCAACAGCCTGGCCCCACA...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTATTGGAACTCAGCCTaGCCCAGGCCCAGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHYWNSA*PRPSEP
Trigger: AGGCTCACTGGGCCTGGGCAAGGCTGAGTTCCAATA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS TCA 90 bp CCTGCTCCTGCCAGAGCTGCATCCAGCGGATGTCACAGCTGCAGTTaGAAAAGTTCTGCTCCAACTGCAATTCCCGAAGACTCAGCGTCT +
Preference number: 5 (lower is better)
Translates to: PAPARAASSGCHSCS*KSSAPTAIPEDSAS
Trigger: AGACGCTGAGTCTTCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559188.1
ENST00000626019.2
ENST00000629765.2
CDS TCA 90 bp GATGGACTGCAGCCCAGTGACTATCCAGTCCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGTGATAACAGCGTTGTCACCCTCTCG +
Preference number: 5 (lower is better)
Translates to: DGLQPSDYPVHIRKG*SRAIASDNSVVTLS
Trigger: CGAGAGGGTGACAACGCTGTTATCACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTGGACTGGATAGTCACTGGGCTGCAGTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS GCA 90 bp GACAGTGAGGGCAACACTGGCATTGCTCATGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAAGCCATTGTCCTCACTCGTCACATT +
Preference number: 5 (lower is better)
Translates to: DSEGNTGIAHAHHVL*NARQGEAIVLTRHI
Trigger: AATGTGACGAGTGAGGACAATGGCTTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCCTCACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS CCA 90 bp GGAAGCCATCATGGGCCAATCCGGAGTTATGCGTGTTCTTTTTCCTaGCAGCCCAGCATCAGCCCAGTCAAGACAGCTCACCCTTCATTC +
Preference number: 5 (lower is better)
Translates to: GSHHGPIRSYACSFS*QPSISPVKTAHPSF
Trigger: GAATGAAGGGTGAGCTGTCTTGACTGGGCTGATGCTGGGCTGCCAGGAAAAAGAACACGCATAACTCCGGATTGGCCCATGATGGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS-3UTR CAA 90 bp AACCCCATGGAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACCAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTC +
Preference number: 5 (lower is better)
Translates to: NPMEAFAESGWDPDTKNHQVITA*SPSRTV
Trigger: GACCGTACGAGAGGGTGACAACGCTGTTATCACTTG...GTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTCCATGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCGCAGAGGCTGCCCATaGTGCAGCCAGTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRRGCP*CSQCSV
Trigger: AACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTCGCAGAGGCTGCCCATaGTGCAGCCAGTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLARRGCP*CSQCSV
Trigger: AACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCG...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTGGTGATGCCGTGGTaGATGTGGTGCAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVVVMPW*MWCSGL
Trigger: CAGCCCACTGCACCACATCAACCACGGCATCACCAC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TTAGGTGGGCAGCCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTGGCCTCTGAGACCTAACTaGGTGCCAATACTTGAGCCT +
Preference number: 5 (lower is better)
Translates to: LGGQPMLTSYNGGPMGQWPLRPN*VPILEP
Trigger: AGGCTCAAGTATTGGCACCAAGTTAGGTCTCAGAGG...CCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCACCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAAAGCCCCAGCTCACCCTaGGCCTGGCGTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SAFSSPFPRTESNISMLQSPSSP*AWRGCP
Trigger: TGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCT...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGNVEH*GEPQLT
Trigger: GGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACATCGTACACCTCTTaGGGGCAGACTCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTSYTS*GQTRGR
Trigger: GCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGAGAGTGGGCTCTATTaGTCTGGCCCTGTACAGTTC +
Preference number: 5 (lower is better)
Translates to: SSPAEEICGARLLASMFHESGLY*SGPVQF
Trigger: GAACTGTACAGGGCCAGACAAATAGAGCCCACTCTC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTCTCTGTGTCTCAGGTaGCACTCATACTTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPSLCLR*HSYFPL
Trigger: CAAGGGGAAGTATGAGTGCAACCTGAGACACAGAGA...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS GCA 90 bp TGCGCCAGTTCTCTATGTGTCTTCAAACTCTATCTTGCCAGCCAATaGAGTACAGACACTGTCCACATAGGATCTGGGGAGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: CASSLCVFKLYLASQ*STDTVHIGSGEATR
Trigger: CCGGGTGGCCTCCCCAGATCCTATGTGGACAGTGTCTGTACTGCATTGGCTGGCAAGATAGAGTTTGAAGACACATAGAGAACTGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559188.1
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGCTGCAGACACAATTaGCAGGGCAAGCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVCCRHN*QGKPAR
Trigger: CCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTTCCGGCCGCCGGCAATaGATCTCAGTCTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPSGRRQ*ISVLLQ
Trigger: CTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGA...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCCGGCCGCCGGCAATaGATCTCAGTCTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSGRRQ*ISVLLQ
Trigger: CTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACCTTGATGGTCAGCTTTaGAAGTCCGGTGTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: RTMPRASNLSEGPAYQGDLDGQL*KSGVEL
Trigger: GAGCTCTACACCGGACTTCAAAAGCTGACCATCAAG...GTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCTCGTACGGTCAGGTaGACGTGGCTCACGCTGATC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVSRTVR*TWLTLI
Trigger: GATCAGCGTGAGCCACGTCAACCTGACCGTACGAGA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAGGGCAACACTGGCATaGCTCATGCCCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRATLA*LMPTTF
Trigger: GAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCCT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCGCAGAGGCTGCCCATaGTGCAGCCAGTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: AFSSPFPRTESNISMLQRRRGCP*CSQCSV
Trigger: AACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCG...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCGCAGAGGCTGCCCATaGTGCAGCCAGTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRRGCP*CSQCSV
Trigger: AACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCTTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ASLDPKRTMPRASNLSEGLRKWP*MVWLAV
Trigger: CACAGCCAACCAGACCATCAATGGCCACTTCCTCAA...GCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCATTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPLRKWP*MVWLAV
Trigger: CACAGCCAACCAGACCATCAATGGCCACTTCCTCAA...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGGGACCGTCGACCATATTaGTTGATCATGACGAAGAGA +
Preference number: 5 (lower is better)
Translates to: CQWWMGENTHLVVLKGAGDRRPY*LIMTKR
Trigger: TCTCTTCGTCATGATCAACAAATATGGTCGACGGTC...CCCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTGGTGATGCCGTGGTaGATGTGGTGCAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCVVMPW*MWCSGL
Trigger: CAGCCCACTGCACCACATCAACCACGGCATCACCAC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTTGTCGGCCTCAGTGGATCAAGTaGAAAATGGGGGAAGCGAGC +
Preference number: 5 (lower is better)
Translates to: PSRMASSWVKPPAAKACRPQWIK*KMGEAS
Trigger: GCTCGCTTCCCCCATTTTCAACTTGATCCACTGAGG...CCGACAAGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACAGCCACAAGCATCTaGTCCTTGGTCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVTATSI*SLVGLR
Trigger: CCTCAGCCCGACCAAGGACAAGATGCTTGTGGCTGT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGCCCCAGCTCACCCTaGGCCTGGCGTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESPSSP*AWRGCP
Trigger: TGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGATGCCAGAGAGATCTGAGCCCCAGCTCACCCTaGGCCTGGCGTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: LLGYEGNAFIWKRCQRDLSPSSP*AWRGCP
Trigger: TGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCT...CAGATCTCTCTGGCATCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGNVEH*GEPQLT
Trigger: GGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGACATCGTACACCTCTTaGGGGCAGACTCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGTSYTS*GQTRGR
Trigger: GCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAAGCACTGGCCGCTCATaGGACATCTCCCAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVSTGRS*DISQRS
Trigger: GCTTCTCTGGGAGATGTCCAATGAGCGGCCAGTGCT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGCTGGGAGAACGCACTaGTTTTCCTCTCTGAAAACC +
Preference number: 5 (lower is better)
Translates to: SSPAEEICGARLLASMFHAGRTH*FSSLKT
Trigger: GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS TCA 90 bp TGGTCAGCTTTTGAAGTCCGGTGTAGAGCTCCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCCAGTTCTCTATGTGTCTACTGTAGT +
Preference number: 5 (lower is better)
Translates to: WSAFEVRCRAPCPRR*ACEDCASSLCVYCS
Trigger: ACTACAGTAGACACATAGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGTGGACATGGAGCTCTACACCGGACTTCAAAAGCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS TCA 90 bp TGGTCAGCTTTTGAAGTCCGGTGTAGAGCTCCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCCAGTTCTCTATGTGTCTTCAAACTC +
Preference number: 5 (lower is better)
Translates to: WSAFEVRCRAPCPRR*ACEDCASSLCVFKL
Trigger: GAGTTTGAAGACACATAGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGTGGACATGGAGCTCTACACCGGACTTCAAAAGCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559188.1
CDS TCA 90 bp AATTCAGGGAAGTTGTACCAAGAGGGCAGAGGTATGATGGGCACTTaGAGGCTGAGAGGTTTGGCAACCTGGCTTTTGGGGGAGAGGCTA +
Preference number: 5 (lower is better)
Translates to: NSGKLYQEGRGMMGT*RLRGLATWLLGERL
Trigger: TAGCCTCTCCCCCAAAAGCCAGGTTGCCAAACCTCTCAGCCTTCAAGTGCCCATCATACCTCTGCCCTCTTGGTACAACTTCCCTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS CCA 90 bp TTGAAAAAGTTCTGCTCCAACTGCAATTCCCGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGTGTGGTGAGCCGGTTACTTGACAGG +
Preference number: 5 (lower is better)
Translates to: LKKFCSNCNSRRLSV*KSCHESVVSRLLDR
Trigger: CCTGTCAAGTAACCGGCTCACCACACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCGGGAATTGCAGTTGGAGCAGAACTTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559188.1
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CCTACAAATGTGCCTTTCCTACTGAAGAAGGGAAAGTCACCCCCTTCCCTCTCCCGCCAGAAACTACACTaGGCTGGGCAAAGAGAGACA +
Preference number: 5 (lower is better)
Translates to: PTNVPFLLKKGKSPPSLSRQKLH*AGQRET
Trigger: TGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCG...GGAGAGGGAAGGGGGTGACTTTCCCTTCTTCAGTAGGAAAGGCACATTTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGCTGCAGACACAATTaGCAGGGCAAGCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCCCRHN*QGKPAR
Trigger: CCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTTGCTGCAGACACAATTaGCAGGGCAAGCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLCCRHN*QGKPAR
Trigger: CCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCA...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTGCCAGTGGTGGATGGGGGAAAACACCCATCTGGTGGTGTTAAAGGGTGCCGGCAATTGATCTCAGTCTaGCTGCAGACACAATTTGCA +
Preference number: 5 (lower is better)
Translates to: LPVVDGGKHPSGGVKGCRQLISV*LQTQFA
Trigger: TGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTG...CCGGCACCCTTTAACACCACCAGATGGGTGTTTTCCCCCATCCACCACTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTCCGGCCGCCGGCAATaGATCTCAGTCTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGSGRRQ*ISVLLQ
Trigger: CTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCACTTGATGGTCAGCTTTaGAAGTCCGGTGTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPLDGQL*KSGVEL
Trigger: GAGCTCTACACCGGACTTCAAAAGCTGACCATCAAG...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTCTCGTACGGTCAGGTaGACGTGGCTCACGCTGATC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCSRTVR*TWLTLI
Trigger: GATCAGCGTGAGCCACGTCAACCTGACCGTACGAGA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TGTGGTCCTAGTAGGATGGCCAGTTCATGGGTAAAACCTCCTGCAGCCAAAGCTGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTC +
Preference number: 5 (lower is better)
Translates to: CGPSRMASSWVKPPAAKAVRVKP*SSLVTF
Trigger: GAATGTGACGAGTGAGGACAATGGCTTCACCCTGAC...AGCTTTGGCTGCAGGAGGTTTTACCCATGAACTGGCCATCCTACTAGGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGGGCAACACTGGCATaGCTCATGCCCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRATLA*LMPTTF
Trigger: GAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGTGGTGATGCCGTGGTaGATGTGGTGCAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGVVMPW*MWCSGL
Trigger: CAGCCCACTGCACCACATCAACCACGGCATCACCAC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTGTGGTGATGCCGTGGTaGATGTGGTGCAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: AFSSPFPRTESNISMLQRVVMPW*MWCSGL
Trigger: CAGCCCACTGCACCACATCAACCACGGCATCACCAC...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCGATCGCTGCTTCTTaGAAACGCCGAGCGATCAGA +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPIAAS*KRRAIR
Trigger: TCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACAGCCACAAGCATCTaGTCCTTGGTCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTATSI*SLVGLR
Trigger: CCTCAGCCCGACCAAGGACAAGATGCTTGTGGCTGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGNVEH*GEPQLT
Trigger: GGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: PSAFSSPFPRTESNISMLGNVEH*GEPQLT
Trigger: GGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCC...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CAA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAACATCGTACACCTCTTaGGGGCAGACTCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISTSYTS*GQTRGR
Trigger: GCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGAATGTCCAGGTAGATaGGGGTGGCCTTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVECPGR*GWPSPK
Trigger: CTTTGGGGAAGGCCACCCCAATCTACCTGGACATTC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTCATCTAGAAGCAAGTTaGAAGGGCCAGTTAGCACAT +
Preference number: 5 (lower is better)
Translates to: LAGLPWPSVYDYCHIMSPHLEAS*KGQLAH
Trigger: ATGTGCTAACTGGCCCTTCAAACTTGCTTCTAGATG...AGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS TCA 90 bp ATTCCCGAAGACTCAGCGTCTGGAAGAGCTGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGTTTATATAACGCAAATGGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: IPEDSASGRAATRVW*AGYLTGLYNANGGS
Trigger: AGAACCCCCATTTGCGTTATATAAACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559188.1
ENST00000626019.2
ENST00000629765.2
CDS CCA 90 bp CTCCTTGAGGAAGTGGCCATTGATGGTCTGGTTGGCTGTGCCCAGTaGGTTTTTGGCAATGAGGGTATAGTTGCCATTGTTGTAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LLEEVAIDGLVGCAQ*VFGNEGIVAIVVVG
Trigger: ACCCACTACAACAATGGCAACTATACCCTCATTGCCAAAAACCCACTGGGCACAGCCAACCAGACCATCAATGGCCACTTCCTCAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTGCTGCAGACACAATTaGCAGGGCAAGCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGCCRHN*QGKPAR
Trigger: CCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGATACTGGCGTTCCCATaGCTGTTCCCTGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVILAFP*LFPESC
Trigger: GCAGGATTCAGGGAACAGCAATGGGAACGCCAGTAT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAGTTGAAAATGGGGGAGATGTCCGTGATGTaGATACTGGCGTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: RRESHPLPSPQWIKLKMGEMSVM*ILAFPL
Trigger: CAATGGGAACGCCAGTATCAACATCACGGACATCTC...CCCCATTTTCAACTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp GAGGCATTTGCAGAATCGGGCTGGGATCCTGACACGAAGAACCACCATCCACAGATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: EAFAESGWDPDTKNHHPQMSQLQ*KKFCSN
Trigger: GTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACAT...CTGTGGATGGTGGTTCTTCGTGTCAGGATCCCAGCCCGATTCTGCAAATGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTTCTCGTACGGTCAGGTaGACGTGGCTCACGCTGATC +
Preference number: 5 (lower is better)
Translates to: PSAFSSPFPRTESNISMLSRTVR*TWLTLI
Trigger: GATCAGCGTGAGCCACGTCAACCTGACCGTACGAGA...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVQVITA*SPSRTV
Trigger: GACCGTACGAGAGGGTGACAACGCTGTTATCACTTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVVRVKP*SSLVTF
Trigger: GAATGTGACGAGTGAGGACAATGGCTTCACCCTGAC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CACTGGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATAGGGCAACACTGGCATaGCTCATGCCCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: HWWLMQFLLSIPGSKENNRATLA*LMPTTF
Trigger: GAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCCT...ATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGGGCAACACTGGCATaGCTCATGCCCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRATLA*LMPTTF
Trigger: GAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCCT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGAGGGCAACACTGGCATaGCTCATGCCCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: SLFLSFPEDRIQYKHASTRATLA*LMPTTF
Trigger: GAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCCT...CGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGCGCAGAGGCTGCCCATaGTGCAGCCAGTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: ADSIGFQKFSESRISGSRRRGCP*CSQCSV
Trigger: AACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCG...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACGCAGAGGCTGCCCATaGTGCAGCCAGTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERRGCP*CSQCSV
Trigger: AACGCTGCACTGGCTGCACAATGGGCAGCCTCTGCG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVLRKWP*MVWLAV
Trigger: CACAGCCAACCAGACCATCAATGGCCACTTCCTCAA...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp ACAATGCCTAGAGCTTCCAACCTCTCAGAGGGCCCAGCCTACCAAGGTGACATCCCCTTCATTCCAAATTaGGACCGTCGACCATATTTG +
Preference number: 5 (lower is better)
Translates to: TMPRASNLSEGPAYQGDIPFIPN*DRRPYL
Trigger: CAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG...GATGTCACCTTGGTAGGCTGGGCCCTCTGAGAGGTTGGAAGCTCTAGGCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp TTAGGTGGGCAGCCTATGCTGACTTCATACAATGGAGGCCCCATGGGCCAGTGGGAAATGCTGATTCCATaGGGTTCCAAAAGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LGGQPMLTSYNGGPMGQWEMLIP*GSKSSQ
Trigger: CTGAGAACTTTTGGAACCCAATGGAATCAGCATTTC...CCACTGGCCCATGGGGCCTCCATTGTATGAAGTCAGCATAGGCTGCCCACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGACAGCCACAAGCATCTaGTCCTTGGTCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SLFLSFPEDRIQYKHASTTATSI*SLVGLR
Trigger: CCTCAGCCCGACCAAGGACAAGATGCTTGTGGCTGT...CGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGACAGCCACAAGCATCTaGTCCTTGGTCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGTATSI*SLVGLR
Trigger: CCTCAGCCCGACCAAGGACAAGATGCTTGTGGCTGT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTAGCCCCAGCTCACCCTaGGCCTGGCGTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: FPEDRIQYKHASTSQNFLSPSSP*AWRGCP
Trigger: TGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCT...AAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CAA 90 bp TTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: FSLFLSFPEDRIQYKHASGNVEH*GEPQLT
Trigger: GGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCC...TGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000558576.5
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAACATCGTACACCTCTTaGGGGCAGACTCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVETSYTS*GQTRGR
Trigger: GCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATCCTTTTTCTTGTCTCTaGACTAGAGGAGGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SSPAEEICGARLLASMFHPFSCL*TRGGSV
Trigger: CACTGAACCTCCTCTAGTCAAGAGACAAGAAAAAGG...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTTCCCTAGACATTTCCTaGCTCCAGATTCCGAGCAAA +
Preference number: 5 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVSLDIS*LQIPSK
Trigger: TTTGCTCGGAATCTGGAGCAAGGAAATGTCTAGGGA...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGAGTCTTCTAGCAGGTaGGCTCCCTACCAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVESSSR*APYQSR
Trigger: TCTGCTTTGGTAGGGAGCCAACCTGCTAGAAGACTC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGGCATTATAATAGGCTaGTTGTCCCAGAGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: SSPAEEICGARLLASMFHGIIIG*LSQSLL
Trigger: CAAGAGACTCTGGGACAACAAGCCTATTATAATGCC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTCAGAATACTGTGACTTaGGCATTCTGGCCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVQNTVT*AFWPQD
Trigger: ATCCTGAGGCCAGAATGCCAAAGTCACAGTATTCTG...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGTGCCATGGCCTTTTTaGCAGGGCAAGTGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLVPWPF*QGKCEH
Trigger: GTGCTCACACTTGCCCTGCAAAAAAGGCCATGGCAC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTGTGGAAGCTGCCGTaGCTGCTAGCCTCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVWKLP*LLASAA
Trigger: AGCGGCAGAGGCTAGCAGCAACGGCAGCTTCCACAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS TCA 90 bp GAGCAGAGGGCCCCAGATAGCGGGCCAGCTATGGCGAGGTTGGAGTaGGGCCTAGAGAACGTGTTAACATCTTTATTAACAATCTTAATC +
Preference number: 5 (lower is better)
Translates to: EQRAPDSGPAMARLE*GLENVLTSLLTILI
Trigger: GATTAAGATTGTTAATAAAGATGTTAACACGTTCTCTAGGCCTCACTCCAACCTCGCCATAGCTGGCCCGCTATCTGGGGCCCTCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560739.1
CDS CCA 90 bp CAAGGCCACCTGGAGAGCACAGGGCTGAAAGAGCATTGTAGTGGGTaGTGTGTAAGCCTTGGTTTTTCCAGAATAGAGGCTGAAGATCAT +
Preference number: 5 (lower is better)
Translates to: QGHLESTGLKEHCSG*CVSLGFSRIEAEDH
Trigger: ATGATCTTCAGCCTCTATTCTGGAAAAACCAAGGCTTACACACCACCCACTACAATGCTCTTTCAGCCCTGTGCTCTCCAGGTGGCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560739.1
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCGCCAGAAACTACACTaGGCTGGGCAAAGAGAGACA +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRQKLH*AGQRET
Trigger: TGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCCGGCCGCCGGCAATaGATCTCAGTCTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESGRRQ*ISVLLQ
Trigger: CTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTATACTGGCGTTCCCATaGCTGTTCCCTGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCILAFP*LFPESC
Trigger: GCAGGATTCAGGGAACAGCAATGGGAACGCCAGTAT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGAGATGTCCGTGATGTaGATACTGGCGTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVEMSVM*ILAFPL
Trigger: CAATGGGAACGCCAGTATCAACATCACGGACATCTC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVMSQLQ*KKFCSN
Trigger: GTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACAT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCQVITA*SPSRTV
Trigger: GACCGTACGAGAGGGTGACAACGCTGTTATCACTTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGGTGATCCAGAGCCATaGCAAGTGATAACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVGDPEP*QVITAL
Trigger: CAACGCTGTTATCACTTGCAATGGCTCTGGATCACC...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCVRVKP*SSLVTF
Trigger: GAATGTGACGAGTGAGGACAATGGCTTCACCCTGAC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCLRKWP*MVWLAV
Trigger: CACAGCCAACCAGACCATCAATGGCCACTTCCTCAA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCACGTCGACCATATTTGTaGATCATGACGAAGAGAACC +
Preference number: 5 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPRRPYL*IMTKRT
Trigger: GGTTCTCTTCGTCATGATCAACAAATATGGTCGACG...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp GGTCTGCCCTGGCCATCGGTCTATGACTACTGCCACATCATGTCTCCTTTTCCAGACCGTCGACCATATTaGTTGATCATGACGAAGAGA +
Preference number: 5 (lower is better)
Translates to: GLPWPSVYDYCHIMSPFPDRRPY*LIMTKR
Trigger: TCTCTTCGTCATGATCAACAAATATGGTCGACGGTC...TGGAAAAGGAGACATGATGTGGCAGTAGTCATAGACCGATGGCCAGGGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTGGTGATGCCGTGGTaGATGTGGTGCAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVVMPW*MWCSGL
Trigger: CAGCCCACTGCACCACATCAACCACGGCATCACCAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GGTGGCTCATGCAGTTTCTACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTCCATGGTTAAGAGGCTaGGAATGTCCGGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GGSCSFYLASLDPKRTMPPWLRG*ECPGRL
Trigger: AAGCCTTCCCGGACATTCCAAGCCTCTTAACCATGG...AGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTAGAAACTGCATGAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CAA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: MITHFSKDETIGCHDPGNGNVEH*GEPQLT
Trigger: GGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCC...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGNVEH*GEPQLT
Trigger: GGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGAATGTCCAGGTAGATaGGGGTGGCCTTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGECPGR*GWPSPK
Trigger: CTTTGGGGAAGGCCACCCCAATCTACCTGGACATTC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTAGAAAGACACATCCTTaGCAACTCCAGCAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVRKTHP*QLQQEA
Trigger: AGCTTCTTGCTGGAGTTGCAAAGGATGTGTCTTTCT...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCCTGACAGCTCTCCCGTaGGTGTTGGTTTCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTLTALP*VLVSAV
Trigger: TACTGCAGAAACCAACACCAACGGGAGAGCTGTCAG...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTATGGGGAATAGATGGTTaGGTCTTCCAGCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVWGIDG*VFQLLQ
Trigger: CTGAAGGAGCTGGAAGACCAAACCATCTATTCCCCA...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAGTGCTTCTGCTACCCTaGTTTTCTCAGTACACCCTT +
Preference number: 5 (lower is better)
Translates to: LVGFDPELISSGLHERWAVLLLP*FSQYTL
Trigger: AAGGGTGTACTGAGAAAACAAGGGTAGCAGAAGCAC...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTACTCTAACAGAGGTGTaGGATGCTGCTCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCTLTEV*DAAHLQ
Trigger: CTGGAGGTGAGCAGCATCCAACACCTCTGTTAGAGT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTCCATTAGCAGTCACTTaGCAGCTCCTTCCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLPLAVT*QLLPLC
Trigger: ACAGAGGGGAAGGAGCTGCAAAGTGACTGCTAATGG...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACATCTGTAAAATTAGCTaGGCCTCAGAACAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHICKIS*ASEQVC
Trigger: GCACACCTGTTCTGAGGCCAAGCTAATTTTACAGAT...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS CCA 90 bp AGTCCAACTGCTATGGATACCCCAAAAGTGTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGTGTGGGACTCACTTCGTCAACTGGA +
Preference number: 5 (lower is better)
Translates to: SPTAMDTPKVSSSGL*VTVIGGVGLTSSTG
Trigger: TCCAGTTGACGAAGTGAGTCCCACACCTCCTATCACTGTGACCCACAAACCAGAAGAAGACACTTTTGGGGTATCCATAGCAGTTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000557856.5
ENST00000558676.5
CDS CCA 90 bp GGAGGTGACCGGTACAGTGTATTGGGCAGCTTATTAGTAGAAAGATaGCAGCAACTTGGAAGGAATTCACAGAACCAGGGAAAGCCGTCA +
Preference number: 5 (lower is better)
Translates to: GGDRYSVLGSLLVER*QQLGRNSQNQGKPS
Trigger: TGACGGCTTTCCCTGGTTCTGTGAATTCCTTCCAAGTTGCTGCCATCTTTCTACTAATAAGCTGCCCAATACACTGTACCGGTCACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560739.1
CDS-3UTR CAA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTCGCCAGAAACTACACTaGGCTGGGCAAAGAGAGACA +
Preference number: 5 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVRQKLH*AGQRET
Trigger: TGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCG...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCGCCAGAAACTACACTaGGCTGGGCAAAGAGAGACA +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRQKLH*AGQRET
Trigger: TGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATGCTGCAGACACAATTaGCAGGGCAAGCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVECCRHN*QGKPAR
Trigger: CCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGATACTGGCGTTCCCATaGCTGTTCCCTGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGILAFP*LFPESC
Trigger: GCAGGATTCAGGGAACAGCAATGGGAACGCCAGTAT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCTTGATGGTCAGCTTTaGAAGTCCGGTGTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCLDGQL*KSGVEL
Trigger: GAGCTCTACACCGGACTTCAAAAGCTGACCATCAAG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTCTTGATGGTCAGCTTTaGAAGTCCGGTGTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLLDGQL*KSGVEL
Trigger: GAGCTCTACACCGGACTTCAAAAGCTGACCATCAAG...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATCTCGTACGGTCAGGTaGACGTGGCTCACGCTGATC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVESRTVR*TWLTLI
Trigger: GATCAGCGTGAGCCACGTCAACCTGACCGTACGAGA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATTCTCGTACGGTCAGGTaGACGTGGCTCACGCTGATC +
Preference number: 5 (lower is better)
Translates to: MITHFSKDETIGCHDPGNSRTVR*TWLTLI
Trigger: GATCAGCGTGAGCCACGTCAACCTGACCGTACGAGA...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGQVITA*SPSRTV
Trigger: GACCGTACGAGAGGGTGACAACGCTGTTATCACTTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGCAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTC +
Preference number: 5 (lower is better)
Translates to: FLSFPEDRIQYKHASTSQQVITA*SPSRTV
Trigger: GACCGTACGAGAGGGTGACAACGCTGTTATCACTTG...CTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGGTGATCCAGAGCCATaGCAAGTGATAACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCGDPEP*QVITAL
Trigger: CAACGCTGTTATCACTTGCAATGGCTCTGGATCACC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGVRVKP*SSLVTF
Trigger: GAATGTGACGAGTGAGGACAATGGCTTCACCCTGAC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAAGGGCAACACTGGCATaGCTCATGCCCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERATLA*LMPTTF
Trigger: GAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCCT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGTTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGLRKWP*MVWLAV
Trigger: CACAGCCAACCAGACCATCAATGGCCACTTCCTCAA...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SLFLSFPEDRIQYKHASTLRKWP*MVWLAV
Trigger: CACAGCCAACCAGACCATCAATGGCCACTTCCTCAA...CGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp ATGCTCCCAGTTTCATGCTCTCCACCATTAGGTGGGCAGCCTATGCTGACTTCACGTCGACCATATTTGTaGATCATGACGAAGAGAACC +
Preference number: 5 (lower is better)
Translates to: MLPVSCSPPLGGQPMLTSRRPYL*IMTKRT
Trigger: GGTTCTCTTCGTCATGATCAACAAATATGGTCGACG...TGAAGTCAGCATAGGCTGCCCACCTAATGGTGGAGAGCATGAAACTGGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCCCCTTCATTCCAAATTaGGACCGTCGACCATATTTG +
Preference number: 5 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAPFIPN*DRRPYL
Trigger: CAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TACTTAGCATCCCTGGATCCAAAGAGAACAATGCCTAGAGCTTCCAACCTCTCACCATGGTTAAGAGGCTaGGAATGTCCGGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: YLASLDPKRTMPRASNLSPWLRG*ECPGRL
Trigger: AAGCCTTCCCGGACATTCCAAGCCTCTTAACCATGG...TGAGAGGTTGGAAGCTCTAGGCATTGTTCTCTTTGGATCCAGGGATGCTAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000558306.1
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAACAGCCACAAGCATCTaGTCCTTGGTCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVETATSI*SLVGLR
Trigger: CCTCAGCCCGACCAAGGACAAGATGCTTGTGGCTGT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCTCCAAAACACGACCTaGGGTAATGCACTCAATGAC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVLQNTT*GNALND
Trigger: GTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTCTCTCATCCCAAAGATaGTCTCTCTGCATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLALSSQR*SLCMVQ
Trigger: CTGGACCATGCAGAGAGACAATCTTTGGGATGAGAG...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTGAAGCCACACAGTGTTaGTTCAGGAGAGGATATGGG +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAEATQC*FRRGYG
Trigger: CCCATATCCTCTCCTGAACAAACACTGTGTGGCTTC...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGAGAGGAGTGTCTTATaGGAACTCAGCCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGERSVL*ELSLAQ
Trigger: CTGGGCAAGGCTGAGTTCCAATAAGACACTCCTCTC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGGACCAAAGATCCTTaGCCTCAAGTGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRTKDP*PQVGSL
Trigger: GAGGCTTCCCACTTGAGGCAAAGGATCTTTGGTCCT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTACATCTCAGGGGCCTTaGGGACAGCTCTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTTSQGP*GQLSGL
Trigger: CAGTCCAGAGAGCTGTCCCAAAGGCCCCTGAGATGT...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGGTCAATCCAAACAGCTTTCCTGCAAAGTCCTCAGGGGCTAGGAGCACAGCACTTTTCATGCCTTAATTaGCAGTTCCCTCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: WSIQTAFLQSPQGLGAQHFSCLN*QFPQGK
Trigger: TTTCCCCTGAGGGAACTGCAAATTAAGGCATGAAAA...GTGCTGTGCTCCTAGCCCCTGAGGACTTTGCAGGAAAGCTGTTTGGATTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGACAATCTAGCAGGCTaGCTCCTAGCCCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISDNLAG*LLAQCS
Trigger: AGAGCACTGGGCTAGGAGCAAGCCTGCTAGATTGTC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTTGGATGAGAAACAGATaGGCTTGCCCCATCTCTGGA +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCWMRNR*ACPISG
Trigger: TCCAGAGATGGGGCAAGCCAATCTGTTTCTCATCCA...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTGCAAGTGTTCAGAGTTaGGACAGCTTCCAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAASVQS*DSFQRR
Trigger: CCTCCTTTGGAAGCTGTCCAAACTCTGAACACTTGC...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGAAATCCCAAGCTTGGTaGATGTGCAGGCTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVKSQAW*MCRLGK
Trigger: CTTTCCTAGCCTGCACATCAACCAAGCTTGGGATTT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTGGGAAATTCAGAGCCTaGGATGGTACAGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLGKFRA*DGTEAF
Trigger: GAATGCCTCTGTACCATCCAAGGCTCTGAATTTCCC...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GAGGCCTTTGGGAAGTTACTAGGTTATGAGGGCAATGCATTCATATGGAAGAGAGTGAGGCTACCCAGCTaGCTGTGGACACTGTATGCT +
Preference number: 5 (lower is better)
Translates to: EAFGKLLGYEGNAFIWKRVRLPS*LWTLYA
Trigger: AGCATACAGTGTCCACAGCAAGCTGGGTAGCCTCAC...TCTCTTCCATATGAATGCATTGCCCTCATAACCTAGTAACTTCCCAAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS CCA 90 bp AGTCCAACTGCTATGGATACCCCAAAAGTGTCTTCTTCTGGTTTGTaGGTCACAGTGATAGGAGGTGTGGGACTCACTTCGTCAAACAAG +
Preference number: 5 (lower is better)
Translates to: SPTAMDTPKVSSSGL*VTVIGGVGLTSSNK
Trigger: CTTGTTTGACGAAGTGAGTCCCACACCTCCTATCACTGTGACCCACAAACCAGAAGAAGACACTTTTGGGGTATCCATAGCAGTTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317501.7
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCTGCTGCAGACACAATTaGCAGGGCAAGCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: HSWPFILSLEIITLSESVCCRHN*QGKPAR
Trigger: CCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCA...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCTTGATGGTCAGCTTTaGAAGTCCGGTGTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGLDGQL*KSGVEL
Trigger: GAGCTCTACACCGGACTTCAAAAGCTGACCATCAAG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVMSQLQ*KKFCSN
Trigger: GTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACAT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGTGATCCAGAGCCATaGCAAGTGATAACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGDPEP*QVITAL
Trigger: CAACGCTGTTATCACTTGCAATGGCTCTGGATCACC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGGGTGATCCAGAGCCATaGCAAGTGATAACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: FLSFPEDRIQYKHASTSQGDPEP*QVITAL
Trigger: CAACGCTGTTATCACTTGCAATGGCTCTGGATCACC...CTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp AAGAAGGGAAAGTCACCCCCTTCCCTCTCCTCAGTGGATCAAGTTGAAAATGGGGGAAATCTCTCCCTCTaGGTAGTATTCCACATGGAT +
Preference number: 5 (lower is better)
Translates to: KKGKSPPSLSSVDQVENGGNLSL*VVFHMD
Trigger: ATCCATGTGGAATACTACCAAGAGGGAGAGATTTCC...CCCATTTTCAACTTGATCCACTGAGGAGAGGGAAGGGGGTGACTTTCCCTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCGTCGACCATATTTGTaGATCATGACGAAGAGAACC +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVRRPYL*IMTKRT
Trigger: GGTTCTCTTCGTCATGATCAACAAATATGGTCGACG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCCCTTCATTCCAAATTaGGACCGTCGACCATATTTG +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVPFIPN*DRRPYL
Trigger: CAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCGATCGCTGCTTCTTaGAAACGCCGAGCGATCAGA +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPIAAS*KRRAIR
Trigger: TCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCCGATCGCTGCTTCTTaGAAACGCCGAGCGATCAGA +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTPIAAS*KRRAIR
Trigger: TCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCGG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTCTCCAAAACACGACCTaGGGTAATGCACTCAATGAC +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLALQNTT*GNALND
Trigger: GTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAG...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGAATGTCCAGGTAGATaGGGGTGGCCTTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEECPGR*GWPSPK
Trigger: CTTTGGGGAAGGCCACCCCAATCTACCTGGACATTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGAATGTCCAGGTAGATaGGGGTGGCCTTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTECPGR*GWPSPK
Trigger: CTTTGGGGAAGGCCACCCCAATCTACCTGGACATTC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTTCAGGCATCATTTCTTaGCTGAGCACAGCCATGCAG +
Preference number: 5 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVSGIIS*LSTAMQ
Trigger: CTGCATGGCTGTGCTCAGCAAAGAAATGATGCCTGA...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCTCTTGTCATGGTTTaGTGTTGTGGGGTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCALVMV*CCGVVC
Trigger: ACAGACAACCCCACAACACAAAACCATGACAAGAGC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTACAGGTGGCAGTGTCTaGGCAGGGTTCAGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTTGGSV*AGFRFQ
Trigger: CTGAAACCTGAACCCTGCCAAGACACTGCCACCTGT...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTGCTCTCCCGTTGGTGTaGGTTTCTGCAGTATTTAGC +
Preference number: 5 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVALPLV*VSAVFS
Trigger: GCTAAATACTGCAGAAACCAACACCAACGGGAGAGC...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AATCTTTGCAATGATGGAAAAGACAGGTGGCAGTGTCTTGGCAGGGTTCAGGTTCATCTTTTGTCCCAGTaGGGAGAAACAGGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: NLCNDGKDRWQCLGRVQVHLLSQ*GETGAV
Trigger: CACAGCTCCTGTTTCTCCCAACTGGGACAAAAGATG...AACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCATCATTGCAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAATTATAATAGGCTTGTaGTCCCAGAGTCTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LVGFDPELISSGLHERWAIIIGL*SQSLLC
Trigger: GCACAAGAGACTCTGGGACAACAAGCCTATTATAAT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATATTTTTGTTGGCACTaGGGCCTATTAAAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LVGFDPELISSGLHERWAYFCWH*GLLKVW
Trigger: CCACACCTTTAATAGGCCCAAGTGCCAACAAAAATA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCAACAGTACACAAATCTTaGCCAGAGAGAAGAACACTG +
Preference number: 5 (lower is better)
Translates to: LVGFDPELISSGLHERWATVHKS*PERRTL
Trigger: CAGTGTTCTTCTCTCTGGCAAAGATTTGTGTACTGT...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCCTCTCCAGCAGAGGAGATCTGTGGGGCCAGGCTGTTGGCTTCCATGTTTCATGAGTCAAACATAGACTaGTACATTGTGAGAAATGTG +
Preference number: 5 (lower is better)
Translates to: SSPAEEICGARLLASMFHESNID*YIVRNV
Trigger: CACATTTCTCACAATGTACAAGTCTATGTTTGACTC...ATGAAACATGGAAGCCAACAGCCTGGCCCCACAGATCTCCTCTGCTGGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTCTCCTGGGGCTTCTATaGGCATCATCTCTCCTTCTA +
Preference number: 5 (lower is better)
Translates to: CLGDGCAKISQITTKELTLLGLL*ASSLLL
Trigger: TAGAAGGAGAGATGATGCCAATAGAAGCCCCAGGAG...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTCTTTGATATTTTCTGGCAGGTCTGCCCTGGCCATCGGTCTATGACTACTGCCCCCCAAATTCATATGTaGAAACAGCCCCAAGGTAAT +
Preference number: 5 (lower is better)
Translates to: LFDIFWQVCPGHRSMTTAPQIHM*KQPQGN
Trigger: ATTACCTTGGGGCTGTTTCAACATATGAATTTGGGG...GGCAGTAGTCATAGACCGATGGCCAGGGCAGACCTGCCAGAAAATATCAAAGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS TCA 90 bp GGGTATCAGCTCATAGAGAGAATCCTTCACAGTATTCTCGCGATCTaGCAAATCAGAGCATTCCTCCAAGGCCTTAGCCGATGTATACCT +
Preference number: 5 (lower is better)
Translates to: GYQLIERILHSILAI*QIRAFLQGLSRCIP
Trigger: AGGTATACATCGGCTAAGGCCTTGGAGGAATGCTCTGATTTGTCAGATCGCGAGAATACTGTGAAGGATTCTCTCTATGAGCTGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558576.5
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACGCCAGAAACTACACTaGGCTGGGCAAAGAGAGACA +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVERQKLH*AGQRET
Trigger: TGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGCAATTGATCTCAGTCTaGCTGCAGACACAATTTGCA +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVQLISV*LQTQFA
Trigger: TGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTG...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATACTGGCGTTCCCATaGCTGTTCCCTGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEILAFP*LFPESC
Trigger: GCAGGATTCAGGGAACAGCAATGGGAACGCCAGTAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCMSQLQ*KKFCSN
Trigger: GTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACAT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACACAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTC +
Preference number: 5 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTQVITA*SPSRTV
Trigger: GACCGTACGAGAGGGTGACAACGCTGTTATCACTTG...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQVITA*SPSRTV
Trigger: GACCGTACGAGAGGGTGACAACGCTGTTATCACTTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEVRVKP*SSLVTF
Trigger: GAATGTGACGAGTGAGGACAATGGCTTCACCCTGAC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTAGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTC +
Preference number: 5 (lower is better)
Translates to: LCHELQHGPLNSSPFLILVRVKP*SSLVTF
Trigger: GAATGTGACGAGTGAGGACAATGGCTTCACCCTGAC...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAAAGGGCAACACTGGCATaGCTCATGCCCACCACGTTC +
Preference number: 5 (lower is better)
Translates to: LICLHLDLGIPILQNHEKRATLA*LMPTTF
Trigger: GAACGTGGTGGGCATGAGCAATGCCAGTGTTGCCCT...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAATTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELRKWP*MVWLAV
Trigger: CACAGCCAACCAGACCATCAATGGCCACTTCCTCAA...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTCGTCGACCATATTTGTaGATCATGACGAAGAGAACC +
Preference number: 5 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLRRPYL*IMTKRT
Trigger: GGTTCTCTTCGTCATGATCAACAAATATGGTCGACG...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGACCGTCGACCATATTaGTTGATCATGACGAAGAGA +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCDRRPY*LIMTKR
Trigger: TCTCTTCGTCATGATCAACAAATATGGTCGACGGTC...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCCCTTCATTCCAAATTaGGACCGTCGACCATATTTG +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCPFIPN*DRRPYL
Trigger: CAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAAACAGCCACAAGCATCTaGTCCTTGGTCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKTATSI*SLVGLR
Trigger: CCTCAGCCCGACCAAGGACAAGATGCTTGTGGCTGT...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAACAGCCACAAGCATCTaGTCCTTGGTCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKTATSI*SLVGLR
Trigger: CCTCAGCCCGACCAAGGACAAGATGCTTGTGGCTGT...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCTCCAAAACACGACCTaGGGTAATGCACTCAATGAC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGLQNTT*GNALND
Trigger: GTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTAGACTTTCGTGGAGTTaGAGAAGCTGGATTGTCAGT +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCRLSWS*RSWIVS
Trigger: ACTGACAATCCAGCTTCTCAAACTCCACGAAAGTCT...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAGGATTGTGGAGGCTTTaGTGTGTGTGTGTGCGCATA +
Preference number: 5 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISGLWRL*CVCVRI
Trigger: TATGCGCACACACACACACAAAAGCCTCCACAATCC...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTTGTCGGTTTTGACCCAGAGTTGATTTCCAGTGGCCTGCATGAGAGATGGGCATCACACGTATTTTTGTaGGCACTTGGGCCTATTAAA +
Preference number: 5 (lower is better)
Translates to: LVGFDPELISSGLHERWASHVFL*ALGPIK
Trigger: TTTAATAGGCCCAAGTGCCAACAAAAATACGTGTGA...TGCCCATCTCTCATGCAGGCCACTGGAAATCAACTCTGGGTCAAAACCGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAATTGAGCCCAATCTTTaGTCATCAAGATTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVIEPNL*SSRLPL
Trigger: CAGAGGCAATCTTGATGACAAAAGATTGGGCTCAAT...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTCTTCAATTCAGGGGGTaGTTTGCTGTCCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSLQFRG*FAVPGA
Trigger: AGCACCAGGGACAGCAAACAACCCCCTGAATTGAAG...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CACCTTGTCCTTCAGAATCCGTCTGTCCGGCCTAGACGCAGTCATGACCTTGTTGATATCTGTGTGTCATaGTGCTATATAAAAACTGGC +
Preference number: 5 (lower is better)
Translates to: HLVLQNPSVRPRRSHDLVDICVS*CYIKTG
Trigger: GCCAGTTTTTATATAGCACAATGACACACAGATATC...AACAAGGTCATGACTGCGTCTAGGCCGGACAGACGGATTCTGAAGGACAAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCTGCAGTGACTGACTaGCCTTCCCAACACAGGATT +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPAVTD*PSQHRI
Trigger: AATCCTGTGTTGGGAAGGCAAGTCAGTCACTGCAGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACCAGATATTGAAAGTTaGCTGCACAACATCAGCCTA +
Preference number: 5 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVPDIES*LHNISL
Trigger: TAGGCTGATGTTGTGCAGCAAACTTTCAATATCTGG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTATAGAGGGTGGGCACTaGCCTTTTCAACATATCCCT +
Preference number: 5 (lower is better)
Translates to: CLGDGCAKISQITTKELTIEGGH*PFQHIP
Trigger: AGGGATATGTTGAAAAGGCAAGTGCCCACCCTCTAT...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTCAATTGATCTCAGTCTaGCTGCAGACACAATTTGCA +
Preference number: 5 (lower is better)
Translates to: KMFASVKDGRSCEVEGRCQLISV*LQTQFA
Trigger: TGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTG...ACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCATACTGGCGTTCCCATaGCTGTTCCCTGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: HSWPFILSLEIITLSESVILAFP*LFPESC
Trigger: GCAGGATTCAGGGAACAGCAATGGGAACGCCAGTAT...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGAGATGTCCGTGATGTaGATACTGGCGTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEEMSVM*ILAFPL
Trigger: CAATGGGAACGCCAGTATCAACATCACGGACATCTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACTTGATGGTCAGCTTTaGAAGTCCGGTGTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELDGQL*KSGVEL
Trigger: GAGCTCTACACCGGACTTCAAAAGCTGACCATCAAG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGMSQLQ*KKFCSN
Trigger: GTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACAT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCCAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTC +
Preference number: 5 (lower is better)
Translates to: HSWPFILSLEIITLSESVQVITA*SPSRTV
Trigger: GACCGTACGAGAGGGTGACAACGCTGTTATCACTTG...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTC +
Preference number: 5 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYVRVKP*SSLVTF
Trigger: GAATGTGACGAGTGAGGACAATGGCTTCACCCTGAC...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGGAAATCTCTCCCTCTaGGTAGTATTCCACATGGAT +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGGNLSL*VVFHMD
Trigger: ATCCATGTGGAATACTACCAAGAGGGAGAGATTTCC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CCTTCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTGGAAATCTCTCCCTCTaGGTAGTATTCCACATGGAT +
Preference number: 5 (lower is better)
Translates to: PSAFSSPFPRTESNISMLGNLSL*VVFHMD
Trigger: ATCCATGTGGAATACTACCAAGAGGGAGAGATTTCC...AAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCGTCGACCATATTTGTaGATCATGACGAAGAGAACC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGRRPYL*IMTKRT
Trigger: GGTTCTCTTCGTCATGATCAACAAATATGGTCGACG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCGTCGACCATATTTGTaGATCATGACGAAGAGAACC +
Preference number: 5 (lower is better)
Translates to: AFSSPFPRTESNISMLQRRRPYL*IMTKRT
Trigger: GGTTCTCTTCGTCATGATCAACAAATATGGTCGACG...ACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGACCGTCGACCATATTaGTTGATCATGACGAAGAGA +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGDRRPY*LIMTKR
Trigger: TCTCTTCGTCATGATCAACAAATATGGTCGACGGTC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCCCTTCATTCCAAATTaGGACCGTCGACCATATTTG +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGPFIPN*DRRPYL
Trigger: CAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp CCTACAAATGTGCCTTTCCTACTGAAGAAGGGAAAGTCACCCCCTTCCCTCTCCCATATATATAGTGAGTaGATGGGACTAGATGATCTC +
Preference number: 5 (lower is better)
Translates to: PTNVPFLLKKGKSPPSLSHIYSE*MGLDDL
Trigger: GAGATCATCTAGTCCCATCAACTCACTATATATATG...GGAGAGGGAAGGGGGTGACTTTCCCTTCTTCAGTAGGAAAGGCACATTTGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCACAGCAAAGGAGTTCCTaGAGGTGGTCAATCCAAACA +
Preference number: 5 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISQQRSS*RWSIQT
Trigger: TGTTTGGATTGACCACCTCAAGGAACTCCTTTGCTG...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAGATCAAAGCCAGATaGTGCAGCTTCAGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQIKAR*CSFSQN
Trigger: GTTCTGGCTGAAGCTGCACAATCTGGCTTTGATCTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCACTGGAGTGGCCATATaGGCTAATAGGATGTCATTT +
Preference number: 5 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTTGVAI*ANRMSF
Trigger: AAATGACATCCTATTAGCCAATATGGCCACTCCAGT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTTCTAAAAGGTGGACTTaGGTATGGGAAAATGAGGGT +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLASKRWT*VWENEG
Trigger: ACCCTCATTTTCCCATACCAAAGTCCACCTTTTAGA...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTAATGAAGTCTCTGGCTaGTCTGCCTGGCTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: HCSAVAISQLTLQIANIFNEVSG*SAWLPV
Trigger: TACAGGGAGCCAGGCAGACAAGCCAGAGACTTCATT...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TTTCTACTTAACTTCCAATGCACCCTGTACTCTCCCGGCATGGCTGACTCACTTTCTCAAGACTGTCCATaGCAATCACTGTACTTTGGA +
Preference number: 5 (lower is better)
Translates to: FLLNFQCTLYSPGMADSLSQDCP*QSLYFG
Trigger: TCCAAAGTACAGTGATTGCAATGGACAGTCTTGAGA...AAGTGAGTCAGCCATGCCGGGAGAGTACAGGGTGCATTGGAAGTTAAGTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTAGTACACCGTAAGTATTaGAGCTCTCAATCTACCTTT +
Preference number: 5 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVVHRKY*SSQSTF
Trigger: AAAGGTAGATTGAGAGCTCAAATACTTACGGTGTAC...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACCTTTTCTCAAAACTTaGGATGTAATCAATGGCCCT +
Preference number: 5 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVPFLKT*DVINGP
Trigger: AGGGCCATTGATTACATCCAAAGTTTTGAGAAAAGG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCAGCCAGAAGGATGGTTaGACTTCAAAAAGACAGACT +
Preference number: 5 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTSQKDG*TSKRQT
Trigger: AGTCTGTCTTTTTGAAGTCAAACCATCCTTCTGGCT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTACTTTTGTCATCAAGATaGCCTCTGTATGAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVLLSSR*PLYEAK
Trigger: TTTTGCCTCATACAGAGGCAATCTTGATGACAAAAG...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCATGCCAAACATACCATaGTTCAGCAGTTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTMPNIP*FSSCHK
Trigger: CTTATGGCAACTGCTGAACAATGGTATGTTTGGCAT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTGGGCATAAGATCCAGTaGAAAGCACCTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSGHKIQ*KAPQLL
Trigger: CAGCAGTTGAGGTGCTTTCAACTGGATCTTATGCCC...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAATTGATCTCAGTCTaGCTGCAGACACAATTTGCA +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGQLISV*LQTQFA
Trigger: TGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAAATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: SAFSSPFPRTESNISMLQMSQLQ*KKFCSN
Trigger: GTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACAT...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATGGTGATCCAGAGCCATaGCAAGTGATAACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYGDPEP*QVITAL
Trigger: CAACGCTGTTATCACTTGCAATGGCTCTGGATCACC...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTC +
Preference number: 5 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFVRVKP*SSLVTF
Trigger: GAATGTGACGAGTGAGGACAATGGCTTCACCCTGAC...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp TCAGCCTTTTCCTCTCCTTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACCCTTCATTCCAAATTaGGACCGTCGACCATATTTG +
Preference number: 5 (lower is better)
Translates to: SAFSSPFPRTESNISMLQPFIPN*DRRPYL
Trigger: CAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG...TTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAAGGAGAGGAAAAGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACTCCAAAACACGACCTaGGGTAATGCACTCAATGAC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVELQNTT*GNALND
Trigger: GTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGAGATGTGATGTGTAGCAGGCACTaGAGTTTATATGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: RCSLQSRMEGVVRWKGDVMCSRH*SLYEDV
Trigger: AACATCTTCATATAAACTCAAGTGCCTGCTACACAT...CACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTCAGACTCCGAAATGTaGAGACAAGGGGCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTSDSEM*RQGAKK
Trigger: CTTCTTTGCCCCTTGTCTCAACATTTCGGAGTCTGA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTTCAAACAGGCCTTCTTaGAAGCCATTCCAATCCAAT +
Preference number: 5 (lower is better)
Translates to: CLGDGCAKISQITTKELTSNRPS*KPFQSN
Trigger: ATTGGATTGGAATGGCTTCAAAGAAGGCCTGTTTGA...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGACGCAGTCATGACCTaGTTGCAATGGGATCTTGAA +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTDAVMT*LQWDLE
Trigger: TTCAAGATCCCATTGCAACAAGGTCATGACTGCGTC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTTCCGAAACAGAGGTGTaGCTTTTCTACACAAGAAAA +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLASETEV*LFYTRK
Trigger: TTTTCTTGTGTAGAAAAGCAACACCTCTGTTTCGGA...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACAAGTGGGCTCTATTATTaGTCTGGCCCTGTACAGTTC +
Preference number: 5 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTSGLYY*SGPVQF
Trigger: GAACTGTACAGGGCCAGACAAATAATAGAGCCCACT...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCGGAGGAGCCTTTACTTaGGGATATGAATACAATCAA +
Preference number: 5 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTGGAFT*GYEYNQ
Trigger: TTGATTGTATTCATATCCCAAAGTAAAGGCTCCTCC...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GCTGGAAAGATACTGATGGCTGGGAGAACGCACTTGTTTTCCTCTCTGAAAACCATCATTTTAACGAGATaGATTCTCCAAGACTCGCCA +
Preference number: 5 (lower is better)
Translates to: AGKILMAGRTHLFSSLKTIILTR*ILQDSP
Trigger: TGGCGAGTCTTGGAGAATCAATCTCGTTAAAATGAT...GGTTTTCAGAGAGGAAAACAAGTGCGTTCTCCCAGCCATCAGTATCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ATCCCAAAGATTGTCTCTCTGCATGGTCCAGGTCTTCTGCTCCAAAGAGCCGTATGGGAGAAACAACCTTaGGTGATACCATTAAATCAT +
Preference number: 5 (lower is better)
Translates to: IPKIVSLHGPGLLLQRAVWEKQP*VIPLNH
Trigger: ATGATTTAATGGTATCACCAAAGGTTGTTTCTCCCA...TACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATCCAAAGATGAGACAATaGGCTGCCATGATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYPKMRQ*AAMILA
Trigger: TGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGG...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAATAAAGAGATGTCCGTGATGTaGATACTGGCGTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: FVCTLILEFPSSRTMRNKEMSVM*ILAFPL
Trigger: CAATGGGAACGCCAGTATCAACATCACGGACATCTC...TTTATTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp GAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTATGGGGCATCTTCCTTGATGGTCAGCTTTaGAAGTCCGGTGTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: ESNISMLQRLRIFLWGIFLDGQL*KSGVEL
Trigger: GAGCTCTACACCGGACTTCAAAAGCTGACCATCAAG...GAAGATGCCCCATAAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEMSQLQ*KKFCSN
Trigger: GTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGAAATCTCTCCCTCTaGGTAGTATTCCACATGGAT +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEGNLSL*VVFHMD
Trigger: ATCCATGTGGAATACTACCAAGAGGGAGAGATTTCC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTGGAAATCTCTCCCTCTaGGTAGTATTCCACATGGAT +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTGNLSL*VVFHMD
Trigger: ATCCATGTGGAATACTACCAAGAGGGAGAGATTTCC...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGACCGTCGACCATATTaGTTGATCATGACGAAGAGA +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEDRRPY*LIMTKR
Trigger: TCTCTTCGTCATGATCAACAAATATGGTCGACGGTC...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTCCCTTCATTCCAAATTaGGACCGTCGACCATATTTG +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTPFIPN*DRRPYL
Trigger: CAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACCCTTCATTCCAAATTaGGACCGTCGACCATATTTG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEPFIPN*DRRPYL
Trigger: CAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GCTGATTCCATTGGGTTCCAAAAGTTCTCAGAGTCAAGAATAAGTGGAAGTAGGCATGATTGTCTATGTTaGAAAAGACCCACGTGTCCG +
Preference number: 5 (lower is better)
Translates to: ADSIGFQKFSESRISGSRHDCLC*KRPTCP
Trigger: CGGACACGTGGGTCTTTTCAAACATAGACAATCATG...CCTACTTCCACTTATTCTTGACTCTGAGAACTTTTGGAACCCAATGGAATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317501.7
CDS-3UTR CAA 90 bp CCAATTCATAAACACAGTGTCCTTGGCTGGAAACTTCCAATTCTCCTAAAGAAACTAAGGCAAATGCCCTaGAGTCTTCTAGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: PIHKHSVLGWKLPILLKKLRQMP*SLLAGW
Trigger: CCAACCTGCTAGAAGACTCAAGGGCATTTGCCTTAG...TTTCTTTAGGAGAATTGGAAGTTTCCAGCCAAGGACACTGTGTTTATGAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGCAGCACAATTTGCAATaGCAAAAAGTGGAATCAACC +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGQHNLQ*QKVEST
Trigger: GGTTGATTCCACTTTTTGCAATTGCAAATTGTGCTG...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGGGTTCCAGATGGGATTaGTGGAGACACATCACATGC +
Preference number: 5 (lower is better)
Translates to: SMALFCRKVAISALRFYVGSRWD*WRHITC
Trigger: GCATGTGATGTGTCTCCACAAATCCCATCTGGAACC...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGCAGTCATGACCTTGTaGCAATGGGATCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: HCSAVAISQLTLQIANIFAVMTL*QWDLES
Trigger: GGATTCAAGATCCCATTGCAACAAGGTCATGACTGC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AGAGGACCAGGGGGCATTCGTTATAATGACCTACAAGCAACCAAGTCTCTTGCTAAATCTCAGAGAAAATaGTTATCCAGACTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: RGPGGIRYNDLQATKSLAKSQRK*LSRLQG
Trigger: ACCCTGAAGTCTGGATAACAATTTTCTCTGAGATTT...AGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTGTATACCAGTAGGATaGTGGAGGCTTTTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTCIPVG*WRLLCV
Trigger: CACACACAAAAGCCTCCACAATCCTACTGGTATACA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACACTCACACGTATTTTaGTTGGCACTTGGGCCTATT +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEHSHVF*LALGPI
Trigger: AATAGGCCCAAGTGCCAACAAAAATACGTGTGAGTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGGCCACAAGGAGTCATTaGCATTCTTATTGTGATTGT +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGATRSH*HSYCDC
Trigger: ACAATCACAATAAGAATGCAAATGACTCCTTGTGGC...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGAGACACATGTTTGCCTaGGGATGGAAGCATGAGGGT +
Preference number: 5 (lower is better)
Translates to: SMALFCRKVAISALRFYVRHMFA*GWKHEG
Trigger: ACCCTCATGCTTCCATCCCAAGGCAAACATGTGTCT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAACAATTGATCTCAGTCTaGCTGCAGACACAATTTGCA +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEQLISV*LQTQFA
Trigger: TGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTG...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATGGAAATCTCTCCCTCTaGGTAGTATTCCACATGGAT +
Preference number: 5 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYGNLSL*VVFHMD
Trigger: ATCCATGTGGAATACTACCAAGAGGGAGAGATTTCC...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAGGGATGTGTAGCAGGCACTaGAGTTTATATGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: YMKMFASVKDGRSCEVEGMCSRH*SLYEDV
Trigger: AACATCTTCATATAAACTCAAGTGCCTGCTACACAT...CCCTTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCTCCTTCAGTGCTTCTaGTTCCCCCAAGGAATCACC +
Preference number: 5 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPALLQCF*FPQGIT
Trigger: GGTGATTCCTTGGGGGAACAAGAAGCACTGAAGGAG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CTTTGCCATGAACTGCAACATGGGCCTCTGAATTCCTCTCCTTTCCTAATTTTATGTTTACACGTCTTGTaGGGTTTTAGGGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: LCHELQHGPLNSSPFLILCLHVL*GFRDVA
Trigger: TGCAACATCCCTAAAACCCAACAAGACGTGTAAACA...TAAAATTAGGAAAGGAGAGGAATTCAGAGGCCCATGTTGCAGTTCATGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTGTTGCAATTTCAGCTTaGAGGTTCTATGTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSVAISA*RFYVAV
Trigger: AACAGCCACATAGAACCTCAAAGCTGAAATTGCAAC...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTATCAATGGCCCTATTTaGCAGAAAAGTTGCAATTTC +
Preference number: 5 (lower is better)
Translates to: CLGDGCAKISQITTKELTINGPI*QKSCNF
Trigger: GAAATTGCAACTTTTCTGCAAAATAGGGCCATTGAT...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATGGGGCATATGGATTaGTATACCAGTAGGATTGTG +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEMGHMD*YTSRIV
Trigger: CACAATCCTACTGGTATACAAATCCATATGCCCCAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTACTTATAATAGTGGCTaGTCATCACAAACACCTGGG +
Preference number: 5 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSTYNSG*SSQTPG
Trigger: CCCAGGTGTTTGTGATGACAAGCCACTATTATAAGT...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGCCTGGGTGATGGGTGTGCCAAAATCTCACAAATCACCACCAAAGAACTTACTAGAATCTTTATAAAATaGTATTCGCTGGCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: CLGDGCAKISQITTKELTRIFIK*YSLASS
Trigger: GGAACTGGCCAGCGAATACAATTTTATAAAGATTCT...AGTAAGTTCTTTGGTGGTGATTTGTGAGATTTTGGCACACCCATCACCCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TTAATTTGTTTGCACCTTGATCTTGGAATTCCCATCCTCCAGAACCATGAGAAACTGCCCTCACTCAGTTaGCAGAAGTTATCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: LICLHLDLGIPILQNHEKLPSLS*QKLSLC
Trigger: ACACAGAGATAACTTCTGCAAACTGAGTGAGGGCAG...TTTCTCATGGTTCTGGAGGATGGGAATTCCAAGATCAAGGTGCAAACAAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNMSQLQ*KKFCSN
Trigger: GTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACAT...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TTTCCCGAGGACAGAATCCAATATAAGCATGCTTCAACGTCTCAGAATTTTCTTGACCGTCGACCATATTaGTTGATCATGACGAAGAGA +
Preference number: 5 (lower is better)
Translates to: FPEDRIQYKHASTSQNFLDRRPY*LIMTKR
Trigger: TCTCTTCGTCATGATCAACAAATATGGTCGACGGTC...AAGAAAATTCTGAGACGTTGAAGCATGCTTATATTGGATTCTGTCCTCGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS-3UTR CAA 90 bp AAAGACTACAAATATGGTGCATACTGCCTGGGTGATGGGTGTGCCAAAATCTCAATGTGTAGCAGGCACTaGAGTTTATATGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: KDYKYGAYCLGDGCAKISMCSRH*SLYEDV
Trigger: AACATCTTCATATAAACTCAAGTGCCTGCTACACAT...TGAGATTTTGGCACACCCATCACCCAGGCAGTATGCACCATATTTGTAGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp GTGGTAACCCAATTTGGACTCTCATTTCGAAAGCTGGGATGCTTTTTGTCTACTTGGGTTTTAGGGATGTaGCATGTAAAAGAATGTCAG +
Preference number: 5 (lower is better)
Translates to: VVTQFGLSFRKLGCFLSTWVLGM*HVKECQ
Trigger: CTGACATTCTTTTACATGCAACATCCCTAAAACCCA...AGTAGACAAAAAGCATCCCAGCTTTCGAAATGAGAGTCCAAATTGGGTTACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTCAGGTAGCTATTAAATaGAGACAGAACATGGACAGA +
Preference number: 5 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSQVAIK*RQNMDR
Trigger: TCTGTCCATGTTCTGTCTCAATTTAATAGCTACCTG...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGAAACGTGAATGTAGTTaGCACTATGAGCACGAGCAC +
Preference number: 5 (lower is better)
Translates to: SMALFCRKVAISALRFYVKRECS*HYEHEH
Trigger: GTGCTCGTGCTCATAGTGCAAACTACATTCACGTTT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGCCACATCTGATAGAATaGGAGGAGCCTTTACTTTGG +
Preference number: 5 (lower is better)
Translates to: SMALFCRKVAISALRFYVPHLIE*EEPLLW
Trigger: CCAAAGTAAAGGCTCCTCCAATTCTATCAGATGTGG...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp ACACAAAGATCAACGGAAGCGACACAAATGGGGCATATGGATTTGTATACCAGTTTACTCCAAACCCATTaGTTAGGAGGTCAAGAATGT +
Preference number: 5 (lower is better)
Translates to: TQRSTEATQMGHMDLYTSLLQTH*LGGQEC
Trigger: ACATTCTTGACCTCCTAACAAATGGGTTTGGAGTAA...ACTGGTATACAAATCCATATGCCCCATTTGTGTCGCTTCCGTTGATCTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCACAATGAGCCATCCCTaGTTTTCATCAACACCTACA +
Preference number: 5 (lower is better)
Translates to: HSWPFILSLEIITLSESVTMSHP*FSSTPT
Trigger: TGTAGGTGTTGATGAAAACAAGGGATGGCTCATTGT...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp ACGGTACATCATCTGCCATTCTTTGGTTGCACAACAAACAAGTCATTTTCTAACCAATTGATCTCAGTCTaGCTGCAGACACAATTTGCA +
Preference number: 5 (lower is better)
Translates to: TVHHLPFFGCTTNKSFSNQLISV*LQTQFA
Trigger: TGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTG...GTTAGAAAATGACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGATGTACCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATGTGTAGCAGGCACTaGAGTTTATATGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEMCSRH*SLYEDV
Trigger: AACATCTTCATATAAACTCAAGTGCCTGCTACACAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000557856.5
ENST00000626019.2
ENST00000629765.2
CDS-3UTR CAA 90 bp GTTTATATGAAGATGTTCGCTTCAGTCAAGGATGGAAGGAGTTGTGAGGTGGAAATAAGGAAAATATGCTaGAGGAGAATGAGTCATGCA +
Preference number: 5 (lower is better)
Translates to: VYMKMFASVKDGRSCEVEIRKIC*RRMSHA
Trigger: TGCATGACTCATTCTCCTCAAGCATATTTTCCTTAT...TTCCACCTCACAACTCCTTCCATCCTTGACTGAAGCGAACATCTTCATATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGAAACAGCTACATCTTTaGTCCCAGTTGGGAGAAACA +
Preference number: 5 (lower is better)
Translates to: SMALFCRKVAISALRFYVKQLHL*SQLGET
Trigger: TGTTTCTCCCAACTGGGACAAAAGATGTAGCTGTTT...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TGCCCATCAATCAATGAGCAGATAAAGAAACTGTGGTACACACACACACACACATATAGTGAAATGAGCTaGTTCAAGGAAGGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: CPSINEQIKKLWYTHTHTYSEMS*FKEGFN
Trigger: GTTAAAGCCTTCCTTGAACAAGCTCATTTCACTATA...TGTGTGTGTGTGTGTGTACCACAGTTTCTTTATCTGCTCATTGATTGATGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AATGCATTCATATGGAAGAGATGCCAGAGAGATCTGTTAACCCTTCTGCCATATATCATCTGCCATTCTTaGGTTGCACAACAAACAAGT +
Preference number: 5 (lower is better)
Translates to: NAFIWKRCQRDLLTLLPYIICHS*VAQQTS
Trigger: ACTTGTTTGTTGTGCAACCAAAGAATGGCAGATGAT...ATATGGCAGAAGGGTTAACAGATCTCTCTGGCATCTCTTCCATATGAATGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp ATGATCACTCATTTCTCCAAAGATGAGACAATTGGCTGCCATGATCCTGGCAATTGGACACTGTATGCTTaGTCTTATATTCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: MITHFSKDETIGCHDPGNWTLYA*SYILSQ
Trigger: TTGTGAGAGAATATAAGACAAAGCATACAGTGTCCA...ATTGCCAGGATCATGGCAGCCAATTGTCTCATCTTTGGAGAAATGAGTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGTTCATATCTGACTACTaGTTTCAGCCACAAGATAGG +
Preference number: 5 (lower is better)
Translates to: SMALFCRKVAISALRFYVFISDY*FQPQDR
Trigger: CCTATCTTGTGGCTGAAACAAGTAGTCAGATATGAA...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CATTGTTCAGCAGTTGCCATAAGCCAGCTAACCCTTCAGATTGCCAATATATTTGTTCAGGGCAGGATCTaGAGATGGTATATAATATTT +
Preference number: 5 (lower is better)
Translates to: HCSAVAISQLTLQIANIFVQGRI*RWYIIF
Trigger: AAATATTATATACCATCTCAAGATCCTGCCCTGAAC...AAATATATTGGCAATCTGAAGGGTTAGCTGGCTTATGGCAACTGCTGAACAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp CACTCATGGCCATTCATCCTTTCCCTGGAAATAATAACACTATCAGAATCAGTCGACAATCATATCTATTaGACTCACGGTATGATCACT +
Preference number: 5 (lower is better)
Translates to: HSWPFILSLEIITLSESVDNHIY*THGMIT
Trigger: AGTGATCATACCGTGAGTCAAATAGATATGATTGTC...GACTGATTCTGATAGTGTTATTATTTCCAGGGAAAGGATGAATGGCCATGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS-3UTR CAA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCAGTGTTTACACGTCTaGTTGGGTTTTAGGGATGTT +
Preference number: 5 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAQCLHV*LGFRDV
Trigger: AACATCCCTAAAACCCAACAAGACGTGTAAACACTG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp TCAATGGCCCTATTTTGCAGAAAAGTTGCAATTTCAGCTTTGAGGTTCTATGTGCAATTTTCTCACTGTTaGAAGTCCAAACTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: SMALFCRKVAISALRFYVQFSHC*KSKLFV
Trigger: CACAAACAGTTTGGACTTCAAACAGTGAGAAAATTG...CACATAGAACCTCAAAGCTGAAATTGCAACTTTTCTGCAAAATAGGGCCATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS-3UTR CAA 90 bp AAGTATCTATTGATACATAATGATTTGGGGAATAGATGGTTTGGTCTTCCAGCTCCCATGCTAACCGTTTaGGTTCACGTTCTAATTCAA +
Preference number: 5 (lower is better)
Translates to: KYLLIHNDLGNRWFGLPAPMLTV*VHVLIQ
Trigger: TTGAATTAGAACGTGAACCAAAACGGTTAGCATGGG...AGCTGGAAGACCAAACCATCTATTCCCCAAATCATTATGTATCAATAGATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394480.6
CDS TCA 72 bp CGGTCTGCCGGGCATGGTGGCCGGCTCGGCGATCGCTaGCTCGCCGGGTCCGGGGGCTCTGGAAGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: RSAGHGGRLGDR*LAGSGGSGSEA
Trigger: CGCCTCGCTTCCAGAGCCCCCGGACCCGGCGAGTCAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGACCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS CCA 72 bp CGAGGAGCGCCTAGTGGCGCGGTCTGCCGGGCATGGTaGCCGGCTCGGCGATCGCTGACTCGCCGGGTCCGG +
Preference number: 6 (lower is better)
Translates to: RGAPSGAVCRAW*PARRSLTRRVR
Trigger: CCGGACCCGGCGAGTCAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGGCGCTCCTCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS CCA 72 bp CCGCGAGGAGCGCCTAGTGGCGCGGTCTGCCGGGCATaGTGGCCGGCTCGGCGATCGCTGACTCGCCGGGTC +
Preference number: 6 (lower is better)
Translates to: PRGAPSGAVCRA*WPARRSLTRRV
Trigger: GACCCGGCGAGTCAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGGCGCTCCTCGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS GCA 72 bp GGGTGGGAGCCGCGAGGAGCGCCTAGTGGCGCGGTCTaGCGGGCATGGTGGCCGGCTCGGCGATCGCTGACT +
Preference number: 6 (lower is better)
Translates to: GWEPRGAPSGAV*RAWWPARRSLT
Trigger: AGTCAGCGATCGCCGAGCCGGCCACCATGCCCGGCAGACCGCGCCACTAGGCGCTCCTCGCGGCTCCCACCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS CCA 72 bp GCTCGGCGATCGCTGACTCGCCGGGTCCGGGGGCTCTaGAAGCGAGGCGCGCTCTCCGACTCCGAGACCGGA +
Preference number: 6 (lower is better)
Translates to: ARRSLTRRVRGL*KRGALSDSETG
Trigger: TCCGGTCTCGGAGTCGGAGAGCGCGCCTCGCTTCCAGAGCCCCCGGACCCGGCGAGTCAGCGATCGCCGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS TCA 72 bp AACGCCGAGCGATCAGATGCAAAATCCTTCAGCGTCTaGAACCATCGCGGACGCCGCCGCCGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: NAERSDAKSFSV*NHRGRRRRRRR
Trigger: GCGGCGGCGGCGGCGGCGGCGTCCGCGATGGTTTCAGACGCTGAAGGATTTTGCATCTGATCGCTCGGCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000559067.1
CDS GCA 72 bp GCTGCAGCAGCCGCCGCGAATGGCTCGCCGCGCGGCTaGAGAAATGTACAAGTGCTCCGAGCCTTACGAAAC +
Preference number: 6 (lower is better)
Translates to: AAAAAANGSPRG*RNVQVLRALRN
Trigger: GTTTCGTAAGGCTCGGAGCACTTGTACATTTCTGCAGCCGCGCGGCGAGCCATTCGCGGCGGCTGCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559067.1
CDS GCA 72 bp AGTGTGGAAGCTGCCGTTGCTGCTAGCCTCTGCCGCTaGCACACCACACTGAACGGGCCCTTCTGGCATGGC +
Preference number: 6 (lower is better)
Translates to: SVEAAVAASLCR*HTTLNGPFWHG
Trigger: GCCATGCCAGAAGGGCCCGTTCAGTGTGGTGTGGCAGCGGCAGAGGCTAGCAGCAACGGCAGCTTCCACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS CCA 72 bp CTGAGGAGCAAGAGAGGGAAAGCGGGCAGTGCTGGCTaGGCCACAGCAGGAAGCCATCATGGGCCAATCCGG +
Preference number: 6 (lower is better)
Translates to: LRSKRGKAGSAG*ATAGSHHGPIR
Trigger: CCGGATTGGCCCATGATGGCTTCCTGCTGTGGCCCAGCCAGCACTGCCCGCTTTCCCTCTCTTGCTCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS TCA 72 bp CATGCCAATGACCACAGTGTCGGGCCCGGCATCCAGTaGCGAGGGCGTGGTGATGCCGTGGTTGATGTGGTG +
Preference number: 6 (lower is better)
Translates to: HANDHSVGPGIQ*RGRGDAVVDVV
Trigger: CACCACATCAACCACGGCATCACCACGCCCTCGTCACTGGATGCCGGGCCCGACACTGTGGTCATTGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558306.1
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp CATACCCGAGGCGATCTGACTGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACCCTTGGCCTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: HTRGDLTGNVEH*GEPQLTLGLAW
Trigger: CCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGGGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp CAGGTACACCATACCCGAGGCGATCTGACTGGCAATGTGGAGCATTaGGGAGAGCCCCAGCTCACCCTTGGCCTGGCGTGGCTGTCCATC +
Preference number: 6 (lower is better)
Translates to: QVHHTRGDLTGNVEH*GEPQLTLGLAWLSI
Trigger: GATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGCCAGTCAGATCGCCTCGGGTATGGTGTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CCA 72 bp CATTTGGGAGAGCCCCAGCTCACCCTTGGCCTGGCGTaGCTGTCCATCCACAAGGATCATTGCATCTGGCCC +
Preference number: 6 (lower is better)
Translates to: HLGEPQLTLGLA*LSIHKDHCIWP
Trigger: GGGCCAGATGCAATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp GGGAAGAGGTTCCCATCGTCCGGCCGCCGGCAATTGATCTCAGTCTaGCTGCAGACACAATTTGCAGGGCAAGCCAGCACGGAGCCCACA +
Preference number: 6 (lower is better)
Translates to: GKRFPSSGRRQLISV*LQTQFAGQASTEPT
Trigger: TGTGGGCTCCGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGACGATGGGAACCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp CCTTCCAGGAGGGGGAAGAGGTTCCCATCGTCCGGCCGCCGGCAATaGATCTCAGTCTTGCTGCAGACACAATTTGCAGGGCAAGCCAGC +
Preference number: 6 (lower is better)
Translates to: PSRRGKRFPSSGRRQ*ISVLLQTQFAGQAS
Trigger: GCTGGCTTGCCCTGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGACGATGGGAACCTCTTCCCCCTCCTGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS TCA 72 bp GGGGGAAGAGGTTCCCATCGTCCGGCCGCCGGCAATTaGTCTCAGTCTTGCTGCAGACACAATTTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: GGRGSHRPAAGN*SQSCCRHNLQG
Trigger: GCCCTGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGACGATGGGAACCTCTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS GCA 72 bp TTAAAGAGTGTGGAAGCTGCCGTTGCTGCTAGCCTCTaGCGCTGCCACACCACACTGAACGGGCCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LKSVEAAVAASL*RCHTTLNGPFW
Trigger: CCAGAAGGGCCCGTTCAGTGTGGTGTGGCAGCGGCAGAGGCTAGCAGCAACGGCAGCTTCCACACTCTTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS CCA 72 bp TGGAGCATTTGGGAGAGCCCCAGCTCACCCTTGGCCTaGCGTGGCTGTCCATCCACAAGGATCATTGCATCT +
Preference number: 6 (lower is better)
Translates to: WSIWESPSSPLA*RGCPSTRIIAS
Trigger: AGATGCAATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CCA 72 bp CAATGTGGAGCATTTGGGAGAGCCCCAGCTCACCCTTaGCCTGGCGTGGCTGTCCATCCACAAGGATCATTG +
Preference number: 6 (lower is better)
Translates to: QCGAFGRAPAHP*PGVAVHPQGSL
Trigger: CAATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp TTCCCATCGTCCGGCCGCCGGCAATTGATCTCAGTCTaGCTGCAGACACAATTTGCAGGGCAAGCCAGCACG +
Preference number: 6 (lower is better)
Translates to: FPSSGRRQLISV*LQTQFAGQAST
Trigger: CGTGCTGGCTTGCCCTGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGACGATGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp AGGGGGAAGAGGTTCCCATCGTCCGGCCGCCGGCAATaGATCTCAGTCTTGCTGCAGACACAATTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: RGKRFPSSGRRQ*ISVLLQTQFAG
Trigger: CCCTGCAAATTGTGTCTGCAGCAAGACTGAGATCAATTGCCGGCGGCCGGACGATGGGAACCTCTTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp GCAATGTGGAGCATTTGGGAGAGCCCCAGCTCACCCTaGGCCTGGCGTGGCTGTCCATCCACAAGGATCATT +
Preference number: 6 (lower is better)
Translates to: AMWSIWESPSSP*AWRGCPSTRII
Trigger: AATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAGGGTGAGCTGGGGCTCTCCCAAATGCTCCACATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS GCA 72 bp TTGATACTGGCGTTCCCATTGCTGTTCCCTGAATCCTaGCCTTCCAGGAGGGGGAAGAGGTTCCCATCGTCC +
Preference number: 6 (lower is better)
Translates to: LILAFPLLFPES*PSRRGKRFPSS
Trigger: GGACGATGGGAACCTCTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS GCA 72 bp CTTGGCCTGGCGTGGCTGTCCATCCACAAGGATCATTaGATCTGGCCCATGGGCCCTGAGGAACTTATTCAG +
Preference number: 6 (lower is better)
Translates to: LGLAWLSIHKDH*IWPMGPEELIQ
Trigger: CTGAATAAGTTCCTCAGGGCCCATGGGCCAGATGCAATGATCCTTGTGGATGGACAGCCACGCCAGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558576.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS GCA 72 bp CACAGCAGGAAGCCATCATGGGCCAATCCGGAGTTATaGGTGTTCTTTTTCCTGGCAGCCCAGCATCAGCCC +
Preference number: 6 (lower is better)
Translates to: HSRKPSWANPEL*VFFFLAAQHQP
Trigger: GGGCTGATGCTGGGCTGCCAGGAAAAAGAACACGCATAACTCCGGATTGGCCCATGATGGCTTCCTGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS CAA 90 bp CCCTGCTCCTGCCAGAGCTGCATCCAGCGGATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAACTGCAATTCCCGAAGACTCAGCGTC +
Preference number: 6 (lower is better)
Translates to: PCSCQSCIQRMSQLQ*KKFCSNCNSRRLSV
Trigger: GACGCTGAGTCTTCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACATCCGCTGGATGCAGCTCTGGCAGGAGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559188.1
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp GGTGGGCTTGTTGAAGAGCAGGCAGCCCTCGGAAATCTCTCCCTCTaGGTAGTATTCCACATGGATGATCTTGGACTCCCGCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GGLVEEQAALGNLSL*VVFHMDDLGLPQRL
Trigger: CAGCCTCTGCGGGAGTCCAAGATCATCCATGTGGAATACTACCAAGAGGGAGAGATTTCCGAGGGCTGCCTGCTCTTCAACAAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS TCA 72 bp TCATGCCCACCACGTTCTCTGCAATGCACGTCAGGGTaGAGCCATTGTCCTCACTCGTCACATTCACCAGCG +
Preference number: 6 (lower is better)
Translates to: SCPPRSLQCTSG*SHCPHSSHSPA
Trigger: CGCTGGTGAATGTGACGAGTGAGGACAATGGCTTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS GCA 72 bp GGCAACACTGGCATTGCTCATGCCCACCACGTTCTCTaGAATGCACGTCAGGGTGAAGCCATTGTCCTCACT +
Preference number: 6 (lower is better)
Translates to: GNTGIAHAHHVL*NARQGEAIVLT
Trigger: AGTGAGGACAATGGCTTCACCCTGACGTGCATTGCAGAGAACGTGGTGGGCATGAGCAATGCCAGTGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS GCA 72 bp GGCCCTTCTGGCATGGCCCTTCCCTGTAATAATCCGTaGTGTAGACATCTCTGGACATGCCGAAGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: GPSGMALPCNNP*CRHLWTCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCACGGATTATTACAGGGAAGGGCCATGCCAGAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626019.2
CDS CCA 72 bp TTCTGCTCCAACTGCAATTCCCGAAGACTCAGCGTCTaGAAGAGCTGCCACGAGAGTGTGGTGAGCCGGTTA +
Preference number: 6 (lower is better)
Translates to: FCSNCNSRRLSV*KSCHESVVSRL
Trigger: TAACCGGCTCACCACACTCTCGTGGCAGCTCTTCCAGACGCTGAGTCTTCGGGAATTGCAGTTGGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559188.1
ENST00000626019.2
ENST00000629765.2
CDS CCA 72 bp GGAAAGGGCTCCTTGAGGAAGTGGCCATTGATGGTCTaGTTGGCTGTGCCCAGTGGGTTTTTGGCAATGAGG +
Preference number: 6 (lower is better)
Translates to: GKGSLRKWPLMV*LAVPSGFLAMR
Trigger: CCTCATTGCCAAAAACCCACTGGGCACAGCCAACCAGACCATCAATGGCCACTTCCTCAAGGAGCCCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS CCA 72 bp CATGGGCCAATCCGGAGTTATGCGTGTTCTTTTTCCTaGCAGCCCAGCATCAGCCCAGTCAAGACAGCTCAC +
Preference number: 6 (lower is better)
Translates to: HGPIRSYACSFS*QPSISPVKTAH
Trigger: GTGAGCTGTCTTGACTGGGCTGATGCTGGGCTGCCAGGAAAAAGAACACGCATAACTCCGGATTGGCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS CAA 72 bp GTGATAACAGCGTTGTCACCCTCTCGTACGGTCAGGTaGACGTGGCTCACGCTGATCTCAGGAAGGTCACAC +
Preference number: 6 (lower is better)
Translates to: VITALSPSRTVR*TWLTLISGRSH
Trigger: GTGTGACCTTCCTGAGATCAGCGTGAGCCACGTCAACCTGACCGTACGAGAGGGTGACAACGCTGTTATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp AGGGGTGATCCAGAGCCATTGCAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTCAGGTTGACGTGGCTC +
Preference number: 6 (lower is better)
Translates to: RGDPEPLQVITA*SPSRTVRLTWL
Trigger: GAGCCACGTCAACCTGACCGTACGAGAGGGTGACAACGCTGTTATCACTTGCAATGGCTCTGGATCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp ACATCAGGAAGGGGTGATCCAGAGCCATTGCAAGTGATAACAGCGTaGTCACCCTCTCGTACGGTCAGGTTGACGTGGCTCACGCTGATC +
Preference number: 6 (lower is better)
Translates to: TSGRGDPEPLQVITA*SPSRTVRLTWLTLI
Trigger: GATCAGCGTGAGCCACGTCAACCTGACCGTACGAGAGGGTGACAACGCTGTTATCACTTGCAATGGCTCTGGATCACCCCTTCCTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp GGACTCACTTCGTCAACTGGAAAGGGCTCCTTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTGCCCAGTGGGTTTTTGGCAATGAGG +
Preference number: 6 (lower is better)
Translates to: GLTSSTGKGSLRKWP*MVWLAVPSGFLAMR
Trigger: CCTCATTGCCAAAAACCCACTGGGCACAGCCAACCAGACCATCAATGGCCACTTCCTCAAGGAGCCCTTTCCAGTTGACGAAGTGAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000557856.5
ENST00000558676.5
CDS TCA 72 bp TTTGAAGTCCGGTGTAGAGCTCCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCCAGTTCTCTATGTGTC +
Preference number: 6 (lower is better)
Translates to: FEVRCRAPCPRR*ACEDCASSLCV
Trigger: GACACATAGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGTGGACATGGAGCTCTACACCGGACTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542733.6
ENST00000559188.1
CDS GCA 72 bp CCGATCGCTGCTTCTTTGAAACGCCGAGCGATCAGATaGAAAATCCTTCAGCGTCTGAAACCATCGCGGACG +
Preference number: 6 (lower is better)
Translates to: PIAASLKRRAIR*KILQRLKPSRT
Trigger: CGTCCGCGATGGTTTCAGACGCTGAAGGATTTTGCATCTGATCGCTCGGCGTTTCAAAGAAGCAGCGATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
CDS GCA 72 bp GGAGCATGGTGTGTCCTCCCACCCTGTAATAATCCGTaGTGTAGACATCTCTGGACATGCCGAAGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: GAWCVLPPCNNP*CRHLWTCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCACGGATTATTACAGGGTGGGAGGACACACCATGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355254.6
ENST00000394480.6
ENST00000557856.5
CDS CAA 90 bp CCAGTGACTATCCAGTCCACATCAGGAAGGGGTGATCCAGAGCCATaGCAAGTGATAACAGCGTTGTCACCCTCTCGTACGGTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: PVTIQSTSGRGDPEP*QVITALSPSRTVRL
Trigger: CAACCTGACCGTACGAGAGGGTGACAACGCTGTTATCACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTGGACTGGATAGTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp AAGTTATCCGTGCTCTCTGGAAAGGGCTCCTTGAGGAAGTGGCCATaGATGGTCTGGTTGGCTGTGCCCAGTGGGTTTTTGGCAATGAGG +
Preference number: 6 (lower is better)
Translates to: KLSVLSGKGSLRKWP*MVWLAVPSGFLAMR
Trigger: CCTCATTGCCAAAAACCCACTGGGCACAGCCAACCAGACCATCAATGGCCACTTCCTCAAGGAGCCCTTTCCAGAGAGCACGGATAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317501.7
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp GAATTCAGGGAAGTTGTACCAAGAGGGCAGAGGTATGATGGGCACTaGAAGGCTGAGAGGTTTGGCAACCTGGCTTTTGGGGGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: EFREVVPRGQRYDGH*KAERFGNLAFGGEA
Trigger: AGCCTCTCCCCCAAAAGCCAGGTTGCCAAACCTCTCAGCCTTCAAGTGCCCATCATACCTCTGCCCTCTTGGTACAACTTCCCTGAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS TCA 72 bp TTTGAAGTCCGGTGTAGAGCTCCATGTCCACGGCGTTaGGCGTGTGAAGACTGCGCCAGTTCTCTATGTGTA +
Preference number: 6 (lower is better)
Translates to: FEVRCRAPCPRR*ACEDCASSLCV
Trigger: TACACATAGAGAACTGGCGCAGTCTTCACACGCTCAACGCCGTGGACATGGAGCTCTACACCGGACTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS TCA 72 bp CAGCCCAGTGACTATCCAGTCCACATCAGGAAGGGGTaGTCCAGAGCCATTGCAAGTGATAACAGCGTTGTC +
Preference number: 6 (lower is better)
Translates to: QPSDYPVHIRKG*SRAIASDNSVV
Trigger: GACAACGCTGTTATCACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTGGACTGGATAGTCACTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS TCA 72 bp CGGAAATCTCTCCCTCTTGGTAGTATTCCACATGGATaGTCTTGGACTCCCGCAGAGGCTGCCCATTGTGCA +
Preference number: 6 (lower is better)
Translates to: RKSLPLGSIPHG*SWTPAEAAHCA
Trigger: TGCACAATGGGCAGCCTCTGCGGGAGTCCAAGATCATCCATGTGGAATACTACCAAGAGGGAGAGATTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS TCA 72 bp AAGTTGTACCAAGAGGGCAGAGGTATGATGGGCACTTaGAGGCTGAGAGGTTTGGCAACCTGGCTTTTGGGG +
Preference number: 6 (lower is better)
Translates to: KLYQEGRGMMGT*RLRGLATWLLG
Trigger: CCCCAAAAGCCAGGTTGCCAAACCTCTCAGCCTTCAAGTGCCCATCATACCTCTGCCCTCTTGGTACAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS CAA 72 bp ATCCAGTCCACATCAGGAAGGGGTGATCCAGAGCCATaGCAAGTGATAACAGCGTTGTCACCCTCTCGTACG +
Preference number: 6 (lower is better)
Translates to: IQSTSGRGDPEP*QVITALSPSRT
Trigger: CGTACGAGAGGGTGACAACGCTGTTATCACTTGCAATGGCTCTGGATCACCCCTTCCTGATGTGGACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp ACCACGTTCTCTGCAATGCACGTCAGGGTGAAGCCATaGTCCTCACTCGTCACATTCACCAGCGTCAAGTTG +
Preference number: 6 (lower is better)
Translates to: TTFSAMHVRVKP*SSLVTFTSVKL
Trigger: CAACTTGACGCTGGTGAATGTGACGAGTGAGGACAATGGCTTCACCCTGACGTGCATTGCAGAGAACGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp GTTGAAGAGCAGGCAGCCCTCGGAAATCTCTCCCTCTaGGTAGTATTCCACATGGATGATCTTGGACTCCCG +
Preference number: 6 (lower is better)
Translates to: VEEQAALGNLSL*VVFHMDDLGLP
Trigger: CGGGAGTCCAAGATCATCCATGTGGAATACTACCAAGAGGGAGAGATTTCCGAGGGCTGCCTGCTCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp ACGCTTCCCAGCAAGAAAATCCGCCAGAAACTACACTaGGCTGGGCAAAGAGAGACATCCATCTCCGATCGC +
Preference number: 6 (lower is better)
Translates to: TLPSKKIRQKLH*AGQRETSISDR
Trigger: GCGATCGGAGATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCGGATTTTCTTGCTGGGAAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000629765.2
CDS CAA 72 bp GAAGTTGTACCAAGAGGGCAGAGGTATGATGGGCACTaGAAGGCTGAGAGGTTTGGCAACCTGGCTTTTGGG +
Preference number: 6 (lower is better)
Translates to: EVVPRGQRYDGH*KAERFGNLAFG
Trigger: CCCAAAAGCCAGGTTGCCAAACCTCTCAGCCTTCAAGTGCCCATCATACCTCTGCCCTCTTGGTACAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS CAA 90 bp GTGATATTCCTTGAGATGTCCGTGATGTTGATACTGGCGTTCCCATaGCTGTTCCCTGAATCCTGCCCTTCCAGGAGGGGGAAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: VIFLEMSVMLILAFP*LFPESCPSRRGKRF
Trigger: GAACCTCTTCCCCCTCCTGGAAGGGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTATCAACATCACGGACATCTCAAGGAATATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000559067.1
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp TCCAGCCAGACGCTTCCCAGCAAGAAAATCCGCCAGAAACTACACTaGGCTGGGCAAAGAGAGACATCCATCTCCGATCGCTGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: SSQTLPSKKIRQKLH*AGQRETSISDRCFF
Trigger: AAAGAAGCAGCGATCGGAGATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCGGATTTTCTTGCTGGGAAGCGTCTGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
CDS TCA 72 bp CTTGGCAAAGGCTCTGGGCTGAATGCTCCGAAGTCCTaGGTTCTTGATGGTCAGCTTTTGAAGTCCGGTGTA +
Preference number: 6 (lower is better)
Translates to: LGKGSGLNAPKS*VLDGQLLKSGV
Trigger: TACACCGGACTTCAAAAGCTGACCATCAAGAACTCAGGACTTCGGAGCATTCAGCCCAGAGCCTTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559188.1
ENST00000626019.2
ENST00000629765.2
CDS TCA 72 bp GCCCCAGATAGCGGGCCAGCTATGGCGAGGTTGGAGTaGGGCCTAGAGAACGTGTTAACATCTTTATTAACA +
Preference number: 6 (lower is better)
Translates to: APDSGPAMARLE*GLENVLTSLLT
Trigger: TGTTAATAAAGATGTTAACACGTTCTCTAGGCCTCACTCCAACCTCGCCATAGCTGGCCCGCTATCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560739.1
CDS GCA 72 bp TCAGTCCTCATGCCTGCACAACCCTGTAATAATCCGTaGTGTAGACATCTCTGGACATGCCGAAGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: SVLMPAQPCNNP*CRHLWTCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCACGGATTATTACAGGGTTGTGCAGGCATGAGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542733.6
CDS CCA 72 bp TCCCAGCAAGAAAATCCGCCAGAAACTACACTTGGCTaGGCAAAGAGAGACATCCATCTCCGATCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SQQENPPETTLG*AKRDIHLRSLL
Trigger: AAGCAGCGATCGGAGATGGATGTCTCTCTTTGCCCAGCCAAGTGTAGTTTCTGGCGGATTTTCTTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000629765.2
CDS CAA 72 bp TGCCAGAGCTGCATCCAGCGGATGTCACAGCTGCAGTaGAAAAAGTTCTGCTCCAACTGCAATTCCCGAAGA +
Preference number: 6 (lower is better)
Translates to: CQSCIQRMSQLQ*KKFCSNCNSRR
Trigger: TCTTCGGGAATTGCAGTTGGAGCAGAACTTTTTCAACTGCAGCTGTGACATCCGCTGGATGCAGCTCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559188.1
ENST00000626019.2
ENST00000629765.2
CDS TCA 72 bp GACTCAGCGTCTGGAAGAGCTGCCACGAGAGTGTGGTaGGCCGGTTACTTGACAGGTTTATATAACGCAAAT +
Preference number: 6 (lower is better)
Translates to: DSASGRAATRVW*AGYLTGLYNAN
Trigger: ATTTGCGTTATATAAACCTGTCAAGTAACCGGCTCACCACACTCTCGTGGCAGCTCTTCCAGACGCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559188.1
ENST00000626019.2
ENST00000629765.2
CDS GCA 72 bp CCCTGTAATAATCCGTGCTGTAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCACTAGCAGATTCGCTC +
Preference number: 6 (lower is better)
Translates to: PCNNPCCRHLWT*RSPQSSLADSL
Trigger: GAGCGAATCTGCTAGTGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCACGGATTATTACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355254.6
ENST00000394480.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
CDS GCA 72 bp GCCTGTAATAATCCGTGCTGTAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCACTAGCAGATTCGCTC +
Preference number: 6 (lower is better)
Translates to: ACNNPCCRHLWT*RSPQSSLADSL
Trigger: GAGCGAATCTGCTAGTGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCACGGATTATTACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357724.6
ENST00000360948.6
ENST00000629765.2
CDS GCA 72 bp AAACTACACTTGGCTTTGAAACGCCGAGCGATCAGATaGAAAATCCTTCAGCGTCTGAAACCATCGCGGACG +
Preference number: 6 (lower is better)
Translates to: KLHLALKRRAIR*KILQRLKPSRT
Trigger: CGTCCGCGATGGTTTCAGACGCTGAAGGATTTTGCATCTGATCGCTCGGCGTTTCAAAGCCAAGTGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559067.1
CDS GCA 72 bp GCAGCTGGGAAAGTCACTTTACCCTGTAATAATCCGTaGTGTAGACATCTCTGGACATGCCGAAGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: AAGKVTLPCNNP*CRHLWTCRSPQ
Trigger: TTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCACGGATTATTACAGGGTAAAGTGACTTTCCCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558676.5
CDS CCA 72 bp CTGGAGAGCACAGGGCTGAAAGAGCATTGTAGTGGGTaGTGTGTAAGCCTTGGTTTTTCCAGAATAGAGGCT +
Preference number: 6 (lower is better)
Translates to: LESTGLKEHCSG*CVSLGFSRIEA
Trigger: AGCCTCTATTCTGGAAAAACCAAGGCTTACACACCACCCACTACAATGCTCTTTCAGCCCTGTGCTCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560739.1
CDS CAA 72 bp TGTGAGAGGCTCCAGGGAGGTGACCGGTACAGTGTATaGGGCAGCTTATTAGTAGAAAGATGGCAGCAACTT +
Preference number: 6 (lower is better)
Translates to: CERLQGGDRYSV*GSLLVERWQQL
Trigger: AAGTTGCTGCCATCTTTCTACTAATAAGCTGCCCAATACACTGTACCGGTCACCTCCCTGGAGCCTCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560739.1
CDS CAA 90 bp GCAAGTCCAACTGCTATGGATACCCCAAAAGTGTCTTCTTCTGGTTaGTGGGTCACAGTGATAGGAGGTGTGGGACTCACTTCGTCAAAC +
Preference number: 6 (lower is better)
Translates to: ASPTAMDTPKVSSSG*WVTVIGGVGLTSSN
Trigger: GTTTGACGAAGTGAGTCCCACACCTCCTATCACTGTGACCCACAAACCAGAAGAAGACACTTTTGGGGTATCCATAGCAGTTGGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317501.7
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp GCAAGTCCAACTGCTATGGATACCCCAAAAGTGTCTTCTTCTGGTTaGTGGGTCACAGTGATAGGAGGTGTGGGACTCACTTCGTCAACT +
Preference number: 6 (lower is better)
Translates to: ASPTAMDTPKVSSSG*WVTVIGGVGLTSST
Trigger: AGTTGACGAAGTGAGTCCCACACCTCCTATCACTGTGACCCACAAACCAGAAGAAGACACTTTTGGGGTATCCATAGCAGTTGGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355254.6
ENST00000357724.6
ENST00000557856.5
ENST00000558676.5
CDS CAA 90 bp GCAAGTCCAACTGCTATGGATACCCCAAAAGTGTCTTCTTCTGGTTaGTGGGTCACAGTGATAGGAGGTGTGGGACTCACTTCGTCAAAG +
Preference number: 6 (lower is better)
Translates to: ASPTAMDTPKVSSSG*WVTVIGGVGLTSSK
Trigger: CTTTGACGAAGTGAGTCCCACACCTCCTATCACTGTGACCCACAAACCAGAAGAAGACACTTTTGGGGTATCCATAGCAGTTGGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560017.1
CDS GCA 72 bp ACCTGTAATAATCCGTGCTGTAGACATCTCTGGACATaGCGAAGTCCCCAATCTTCACTAGCAGATTCGCTC +
Preference number: 6 (lower is better)
Translates to: TCNNPCCRHLWT*RSPQSSLADSL
Trigger: GAGCGAATCTGCTAGTGAAGATTGGGGACTTCGGCATGTCCAGAGATGTCTACAGCACGGATTATTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558576.5
CDS CCA 72 bp TCCAACTGCTATGGATACCCCAAAAGTGTCTTCTTCTaGTTTGTGGGTCACAGTGATAGGAGGTGTGGGACT +
Preference number: 6 (lower is better)
Translates to: SNCYGYPKSVFF*FVGHSDRRCGT
Trigger: AGTCCCACACCTCCTATCACTGTGACCCACAAACCAGAAGAAGACACTTTTGGGGTATCCATAGCAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000560017.1
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp CCACTGATGACAGCCACGGGACCCTTCATTCCAAATTaGGACCGTCGACCATATTTGTTGATCATGACGAAG +
Preference number: 6 (lower is better)
Translates to: PLMTATGPFIPN*DRRPYLLIMTK
Trigger: CTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGGTCCCGTGGCTGTCATCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp ACAGCCACGGGACCCTTCATTCCAAATTTGGACCGTCGACCATATTaGTTGATCATGACGAAGAGAACCACCAACAGGACACAGGCAAAA +
Preference number: 6 (lower is better)
Translates to: TATGPFIPNLDRRPY*LIMTKRTTNRTQAK
Trigger: TTTTGCCTGTGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGGTCCCGTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp TTCTCTATGTGTATGGAAGTGATATTCCTTGAGATGTCCGTGATGTaGATACTGGCGTTCCCATTGCTGTTCCCTGAATCCTGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: FSMCMEVIFLEMSVM*ILAFPLLFPESCPS
Trigger: GGAAGGGCAGGATTCAGGGAACAGCAATGGGAACGCCAGTATCAACATCACGGACATCTCAAGGAATATCACTTCCATACACATAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 90 bp AGCTCCAGGCCATCCTTCATTCCAAATTTGGACCGTCGACCATATTaGTTGATCATGACGAAGAGAACCACCAACAGGACACAGGCAAAA +
Preference number: 6 (lower is better)
Translates to: SSRPSFIPNLDRRPY*LIMTKRTTNRTQAK
Trigger: TTTTGCCTGTGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGATGGCCTGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560017.1
CDS TCA 72 bp CATTGTCCTCACTCGTCACATTCACCAGCGTCAAGTTaGTGGCATGAACATTGGTCCAGTTCAGATTGGTCT +
Preference number: 6 (lower is better)
Translates to: HCPHSSHSPASS*WHEHWSSSDWS
Trigger: AGACCAATCTGAACTGGACCAATGTTCATGCCATCAACTTGACGCTGGTGAATGTGACGAGTGAGGACAATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000559764.2
ENST00000626019.2
ENST00000629765.2
CDS TCA 72 bp CTCATAGAGAGAATCCTTCACAGTATTCTCGCGATCTaGCAAATCAGAGCATTCCTCCAAGGCCTTAGCCGA +
Preference number: 6 (lower is better)
Translates to: LIERILHSILAI*QIRAFLQGLSR
Trigger: TCGGCTAAGGCCTTGGAGGAATGCTCTGATTTGTCAGATCGCGAGAATACTGTGAAGGATTCTCTCTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558576.5
CDS GCA 72 bp TCTCTATGTGTCTTCAAACTCTATCTTGCCAGCCAATaGAGTACAGACACTGTCCACATAGGATCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: SLCVFKLYLASQ*STDTVHIGSGE
Trigger: CTCCCCAGATCCTATGTGGACAGTGTCTGTACTGCATTGGCTGGCAAGATAGAGTTTGAAGACACATAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559188.1
CDS CAA 90 bp CAAGACAGCTCACCCTTCATTCCAAATTTGGACCGTCGACCATATTaGTTGATCATGACGAAGAGAACCACCAACAGGACACAGGCAAAA +
Preference number: 6 (lower is better)
Translates to: QDSSPFIPNLDRRPY*LIMTKRTTNRTQAK
Trigger: TTTTGCCTGTGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGGTGAGCTGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS TCA 72 bp GCGCCAGTTCTCTATGTGTATGGAAGTGATATTCCTTaGGATGTCCGTGATGTTGATACTGGCGTTCCCATT +
Preference number: 6 (lower is better)
Translates to: APVLYVYGSDIP*DVRDVDTGVPI
Trigger: AATGGGAACGCCAGTATCAACATCACGGACATCTCAAGGAATATCACTTCCATACACATAGAGAACTGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp TGTATGGAAGTGATATTCCTTGAGATGTCCGTGATGTaGATACTGGCGTTCCCATTGCTGTTCCCTGAATCC +
Preference number: 6 (lower is better)
Translates to: CMEVIFLEMSVM*ILAFPLLFPES
Trigger: GGATTCAGGGAACAGCAATGGGAACGCCAGTATCAACATCACGGACATCTCAAGGAATATCACTTCCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp CCCTTCATTCCAAATTTGGACCGTCGACCATATTTGTaGATCATGACGAAGAGAACCACCAACAGGACACAG +
Preference number: 6 (lower is better)
Translates to: PFIPNLDRRPYL*IMTKRTTNRTQ
Trigger: CTGTGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000557897.1
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp GGACCCTTCATTCCAAATTTGGACCGTCGACCATATTaGTTGATCATGACGAAGAGAACCACCAACAGGACA +
Preference number: 6 (lower is better)
Translates to: GPFIPNLDRRPY*LIMTKRTTNRT
Trigger: TGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317501.7
ENST00000355254.6
ENST00000357724.6
ENST00000360948.6
ENST00000394480.6
ENST00000540489.6
ENST00000542733.6
ENST00000557856.5
ENST00000558676.5
ENST00000626019.2
ENST00000629765.2
CDS CAA 72 bp ACAGCCAAAAGCTCCAGGCCATCCTTCATTCCAAATTaGGACCGTCGACCATATTTGTTGATCATGACGAAG +
Preference number: 6 (lower is better)
Translates to: TAKSSRPSFIPN*DRRPYLLIMTK
Trigger: CTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGATGGCCTGGAGCTTTTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560017.1
CDS CAA 90 bp GATCTCTATTGTCCTTCAAGTTTAATATCCCATGATTGTCTATGTTaGAAAAGACCCACGTGTCCGGCTTGTGGCAGTTGTGTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: DLYCPSSLISHDCLC*KRPTCPACGSCVPD
Trigger: GTCAGGGACACAACTGCCACAAGCCGGACACGTGGGTCTTTTCAAACATAGACAATCATGGGATATTAAACTTGAAGGACAATAGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000540489.6
CDS CCA 72 bp ATTGGGCAGCTTATTAGTAGAAAGATGGCAGCAACTTaGAAGGAATTCACAGAACCAGGGAAAGCCGTCAAA +
Preference number: 6 (lower is better)
Translates to: IGQLISRKMAAT*KEFTEPGKAVK
Trigger: TTTGACGGCTTTCCCTGGTTCTGTGAATTCCTTCCAAGTTGCTGCCATCTTTCTACTAATAAGCTGCCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560739.1
CDS CAA 72 bp TCACCCTTCATTCCAAATTTGGACCGTCGACCATATTaGTTGATCATGACGAAGAGAACCACCAACAGGACA +
Preference number: 6 (lower is better)
Translates to: SPFIPNLDRRPY*LIMTKRTTNRT
Trigger: TGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS CAA 72 bp TCCTTCATTCCAAATTTGGACCGTCGACCATATTTGTaGATCATGACGAAGAGAACCACCAACAGGACACAG +
Preference number: 6 (lower is better)
Translates to: SFIPNLDRRPYL*IMTKRTTNRTQ
Trigger: CTGTGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560017.1
CDS CAA 72 bp CCATCCTTCATTCCAAATTTGGACCGTCGACCATATTaGTTGATCATGACGAAGAGAACCACCAACAGGACA +
Preference number: 6 (lower is better)
Translates to: PSFIPNLDRRPY*LIMTKRTTNRT
Trigger: TGTCCTGTTGGTGGTTCTCTTCGTCATGATCAACAAATATGGTCGACGGTCCAAATTTGGAATGAAGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560017.1
CDS TCA 72 bp ACAGTTAATGCACAATTTGATGAGACACCCTTGGTTTaGAGAATTCAGGGAAGTTGTACCAAGAGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: TVNAQFDETPLV*RIQGSCTKRAE
Trigger: CTCTGCCCTCTTGGTACAACTTCCCTGAATTCTTCAAACCAAGGGTGTCTCATCAAATTGTGCATTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557897.1
CDS CAA 72 bp TGTCCTTCAAGTTTAATATCCCATGATTGTCTATGTTaGAAAAGACCCACGTGTCCGGCTTGTGGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: CPSSLISHDCLC*KRPTCPACGSC
Trigger: ACAACTGCCACAAGCCGGACACGTGGGTCTTTTCAAACATAGACAATCATGGGATATTAAACTTGAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000540489.6
CDS CAA 72 bp CACTCTGGACCTCAGGTTCCTCATATATATAGTGAGTaGATGGGACTAGATGATCTCTATTGTCCTTCAAGT +
Preference number: 6 (lower is better)
Translates to: HSGPQVPHIYSE*MGLDDLYCPSS
Trigger: ACTTGAAGGACAATAGAGATCATCTAGTCCCATCAACTCACTATATATATGAGGAACCTGAGGTCCAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000540489.6
CDS CAA 90 bp ACACTTCCCCACTCTGGACCTCAGGTTCCTCATATATATAGTGAGTaGATGGGACTAGATGATCTCTATTGTCCTTCAAGTTTAATATCC +
Preference number: 6 (lower is better)
Translates to: TLPHSGPQVPHIYSE*MGLDDLYCPSSLIS
Trigger: GGATATTAAACTTGAAGGACAATAGAGATCATCTAGTCCCATCAACTCACTATATATATGAGGAACCTGAGGTCCAGAGTGGGGAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317501.7
ENST00000540489.6