RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NTNG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196358

Ensembl transcript IDs: ENST00000372179.7, ENST00000393229.4, ENST00000490694.1

Found 581 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTGCCGGGGTGGGGACACCACAGAGAAGCAACTTACGACGGCTGTaGAGACCAGCGTCCCTGCAGGGTCCAGCTTCTTTCTGGCGCCCT +
Preference number: 1 (lower is better)
Translates to: VAGVGTPQRSNLRRL*RPASLQGPASFWRP
Trigger: AGGGCGCCAGAAAGAAGCTGGACCCTGCAGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTCTCTGTGGTGTCCCCACCCCGGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 90 bp CGTAAGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATaGAGGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGG +
Preference number: 1 (lower is better)
Translates to: RKEECEGRDGPAAGG*RACRKALPGQQGAG
Trigger: CCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCTTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR GCA 90 bp TGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTCTCAGTTCCTaGAGCCGTCTGGCCACAATGGTCTGGGAGCCCTTCCAAGCAATG +
Preference number: 1 (lower is better)
Translates to: CQDGLAAPSTFPLSS*SRLATMVWEPFQAM
Trigger: CATTGCTTGGAAGGGCTCCCAGACCATTGTGGCCAGACGGCTGCAGGAACTGAGAGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 90 bp TGGGAGATAAGGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTaGCCCCAGCACCTTTCCTCTCAGTTCCTGCAGCCGTCTGGCCAC +
Preference number: 1 (lower is better)
Translates to: WEIRPVFGCMSGWPR*PQHLSSQFLQPSGH
Trigger: GTGGCCAGACGGCTGCAGGAACTGAGAGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCCTTATCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp GGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCTTTaGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTC +
Preference number: 1 (lower is better)
Translates to: GTTEAEAPLGDKASL*LHVRMASLPPAPFL
Trigger: GAGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp AGAATAGAAAACAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTaGAGGTCGGGGTCCGCCGCCGCCCGTGAGCCTGGCACAGGCCAG +
Preference number: 1 (lower is better)
Translates to: RIENRTKSATGIVGN*RSGSAAAREPGTGQ
Trigger: CTGGCCTGTGCCAGGCTCACGGGCGGCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTGTTTTCTATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 90 bp ACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTaGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGG +
Preference number: 1 (lower is better)
Translates to: TSQLGKNRCGGRSQC*EHLQVEQWQQLATR
Trigger: CCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR TCA 90 bp GTGAGTCCAGGTGAGAGCAGAGGCCCACTCCAGCACCCCCAGCCTTaGATACACGTGAATCCCTCCGTTGGAGGGGAGCGAGAATCAGGT +
Preference number: 1 (lower is better)
Translates to: VSPGESRGPLQHPQP*IHVNPSVGGERESG
Trigger: ACCTGATTCTCGCTCCCCTCCAACGGAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTGGAGTGGGCCTCTGCTCTCACCTGGACTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR TCA 90 bp CAGTGGCAGCAGTTAGCAACCAGGACCGGACCCCCGGCACTGCTCTaGAATAAACATAGGTGGACAGGAGGCTGGACCGAGGGGGAAGTG +
Preference number: 1 (lower is better)
Translates to: QWQQLATRTGPPALL*NKHRWTGGWTEGEV
Trigger: CACTTCCCCCTCGGTCCAGCCTCCTGTCCACCTATGTTTATTTCAGAGCAGTGCCGGGGGTCCGGTCCTGGTTGCTAACTGCTGCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR GCA 90 bp CCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCTTTGGCTaGATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTCTCAG +
Preference number: 1 (lower is better)
Translates to: PRRQKHHWEIRPVFG*MSGWPRCPQHLSSQ
Trigger: CTGAGAGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR TCA 90 bp GTGAGAGCAGAGGCCCACTCCAGCACCCCCAGCCTTGAATACACGTaGATCCCTCCGTTGGAGGGGAGCGAGAATCAGGTTTCCATGCCT +
Preference number: 1 (lower is better)
Translates to: VRAEAHSSTPSLEYT*IPPLEGSENQVSMP
Trigger: AGGCATGGAAACCTGATTCTCGCTCCCCTCCAACGGAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTGGAGTGGGCCTCTGCTCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp AAGCACCATTGGGAGATAAGGCCAGTCTTTGGCTGCATGTCAGGATaGCCTCGCTGCCCCCAGCACCTTTCCTCTCAGTTCCTGCAGCCG +
Preference number: 1 (lower is better)
Translates to: KHHWEIRPVFGCMSG*PRCPQHLSSQFLQP
Trigger: CGGCTGCAGGAACTGAGAGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCCTTATCTCCCAATGGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp CCCACTCCAGCACCCCCAGCCTTGAATACACGTGAATCCCTCCGTTaGAGGGGAGCGAGAATCAGGTTTCCATGCCTGTCTGTGGCAGAC +
Preference number: 1 (lower is better)
Translates to: PTPAPPALNTRESLR*RGARIRFPCLSVAD
Trigger: GTCTGCCACAGACAGGCATGGAAACCTGATTCTCGCTCCCCTCCAACGGAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTGGAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp AGCTTTGGGGACTCAAGGGAAGGACCCAGGTCTAAACCTCGCAGCTaGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACC +
Preference number: 1 (lower is better)
Translates to: SFGDSREGPRSKPRS*ERTGVVAEASAGST
Trigger: GGTGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTTTAGACCTGGGTCCTTCCCTTGAGTCCCCAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR GCA 90 bp CTGGCTGGGACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTaGCCTCTGGGAAGGATAAATCCTTTCAGACCCCTGGCACCTGCA +
Preference number: 1 (lower is better)
Translates to: LAGTRKNSPWSSSSW*PLGRINPFRPLAPA
Trigger: TGCAGGTGCCAGGGGTCTGAAAGGATTTATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGTCCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 90 bp CCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTATaGTCAGTGTCTCAAGAAGGCTCCTTCCCCATCCTGCTGACTGAA +
Preference number: 1 (lower is better)
Translates to: PPPAPPFTILRVTLL*SVSQEGSFPILLTE
Trigger: TTCAGTCAGCAGGATGGGGAAGGAGCCTTCTTGAGACACTGAGCATAACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 90 bp AGGAAGACGACTTTGGAAGCTGAACTGATCCCTGAATCCCCTGGCTaGGCTCAGGAACAGGTTGACCCAGGTGTCCTCAAGCCCCTTTGG +
Preference number: 1 (lower is better)
Translates to: RKTTLEAELIPESPG*AQEQVDPGVLKPLW
Trigger: CCAAAGGGGCTTGAGGACACCTGGGTCAACCTGTTCCTGAGCCCAGCCAGGGGATTCAGGGATCAGTTCAGCTTCCAAAGTCGTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp TCCCTGGCTGGGACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTaGTGCCCTCTGGGAAGGATAAATCCTTTCAGACCCCTGGCACCT +
Preference number: 1 (lower is better)
Translates to: SLAGTRKNSPWSSSS*CPLGRINPFRPLAP
Trigger: AGGTGCCAGGGGTCTGAAAGGATTTATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGTCCCAGCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp CTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTaGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATAAATCCTTTC +
Preference number: 1 (lower is better)
Translates to: LLEHPSLAGTRKNSP*SSSSWCPLGRINPF
Trigger: GAAAGGATTTATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 90 bp CTCTTTAATTCCCAACTTTGCACAATCTGCCCAGCCTCCCACGGCTaGCCTGGCACCAAGTCAGAAGCAGCTCTGCAAATGGATTCCTCT +
Preference number: 1 (lower is better)
Translates to: LFNSQLCTICPASHG*PGTKSEAALQMDSS
Trigger: AGAGGAATCCATTTGCAGAGCTGCTTCTGACTTGGTGCCAGGGCAGCCGTGGGAGGCTGGGCAGATTGTGCAAAGTTGGGAATTAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp AGAATTCTCAGAGTGACCCATGTCTTCCACCCCAAAGAGGATTCCTaGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCC +
Preference number: 1 (lower is better)
Translates to: RILRVTHVFHPKEDS*VRRLPGNPPIFWLA
Trigger: GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGGTGGAAGACATGGGTCACTCTGAGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR TCA 90 bp TCATCTGATATTGGACTTGAGGCTCCGGCTGCAACAGGTCTGAGATaGCACATCCATCGGAGGTGGCCACCGAGACACAGTATAAATCAG +
Preference number: 1 (lower is better)
Translates to: SSDIGLEAPAATGLR*HIHRRWPPRHSINQ
Trigger: CTGATTTATACTGTGTCTCGGTGGCCACCTCCGATGGATGTGTCATCTCAGACCTGTTGCAGCCGGAGCCTCAAGTCCAATATCAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR GCA 90 bp ACATGTGCGTGTGCATGCCTGTGTGTGTGCATGCATGTGTGTGTGTaGATGTGTGCACTTGCACATGTGATATGGAGAGTATCTGGCCTC +
Preference number: 1 (lower is better)
Translates to: TCACACLCVCMHVCV*MCALAHVIWRVSGL
Trigger: GAGGCCAGATACTCTCCATATCACATGTGCAAGTGCACACATGCACACACACACATGCATGCACACACACAGGCATGCACACGCACATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 90 bp GCAGCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTaGGTGTGCATGCCTGTGTGTGTGCATGCATGTGTGTGTGTGCAT +
Preference number: 1 (lower is better)
Translates to: AALQMDSSVCVCVYM*VCMPVCVHACVCVH
Trigger: ATGCACACACACACATGCATGCACACACACAGGCATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 90 bp CATCCATCGGAGGTGGCCACCGAGACACAGTATAAATCAGAGCATTaGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTTGG +
Preference number: 1 (lower is better)
Translates to: HPSEVATETQYKSEH*IQPLLGFSLSHFPW
Trigger: CCAAGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTTATACTGTGTCTCGGTGGCCACCTCCGATGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 90 bp GAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTaGGGCGTGGAGGAAGGGATGACTTTTAAGAACTTTCTGGAAGCC +
Preference number: 1 (lower is better)
Translates to: EREKPEPQTWTTEAL*GVEEGMTFKNFLEA
Trigger: GGCTTCCAGAAAGTTCTTAAAAGTCATCCCTTCCTCCACGCCCCACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR TCA 90 bp TCTCACGGAGCTGTGAGCCCAGAATACAATGATATGATGATACAATaGTACGAGCACAGCCCAGGAGAACTCACCCTCAGCTACTGCAAT +
Preference number: 1 (lower is better)
Translates to: SHGAVSPEYNDMMIQ*YEHSPGELTLSYCN
Trigger: ATTGCAGTAGCTGAGGGTGAGTTCTCCTGGGCTGTGCTCGTATCATTGTATCATCATATCATTGTATTCTGGGCTCACAGCTCCGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCGGGTGCTGGGCGCCATaGGGGCCCAGGCAGTGGACG +
Preference number: 2 (lower is better)
Translates to: AGLQGPRRQKHHWEIRPVGCWAP*GPRQWT
Trigger: CGTCCACTGCCTGGGCCCCCATGGCGCCCAGCACCC...GACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR TCA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTTCACCGGGCCTCCGGTaGGGCCTGGGGTCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVSPGLR*GLGSGG
Trigger: CCCACCAGACCCCAGGCCTCACCGGAGGCCCGGTGA...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGGTGTGGCCCCAGGGCTaGAGACACCAAGCGGAGATG +
Preference number: 2 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEVWPQG*RHQAEM
Trigger: CATCTCCGCTTGGTGTCTCCAGCCCTGGGGCCACAC...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR TCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTCATCGGCCCCCGCGGTaGCCAGTGCTCCCGCCCCGT +
Preference number: 2 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVHRPPR*PVLPPR
Trigger: ACGGGGCGGGAGCACTGGTCACCGCGGGGGCCGATG...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR GCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAAACAGGTGGGGCACCTaGAGCCTGGCCGCGGGGTGG +
Preference number: 2 (lower is better)
Translates to: APGLETPSGDGRTAGSSENRWGT*SLAAGW
Trigger: CCACCCCGCGGCCAGGCTGCAGGTGCCCCACCTGTT...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp AGAGCAGCACTGTCTTGCCGAGAGGGAGGGTGTGCCTTCTGCTCACTGAGGGGGCTGTGGTGGCCGCAGTaGCCACAGGGCCTTTGGGGT +
Preference number: 2 (lower is better)
Translates to: RAALSCREGGCAFCSLRGLWWPQ*PQGLWG
Trigger: ACCCCAAAGGCCCTGTGGCCACTGCGGCCACCACAG...CCCCCTCAGTGAGCAGAAGGCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTCCCCTGTCATGGCTGTaGTGGCCGCAGTGGCCACAG +
Preference number: 2 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPPLSWL*WPQWPQ
Trigger: CTGTGGCCACTGCGGCCACCACAGCCATGACAGGGG...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGTGTAAGCCCCACACCTaGCCACCGTCCCCAACACAG +
Preference number: 2 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQCKPHT*PPSPTQ
Trigger: CTGTGTTGGGGACGGTGGGCAGGTGTGGGGCTTACA...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAACTGCTGAGTAGCACCTaGGAGCACCTCGGGCCGCAC +
Preference number: 2 (lower is better)
Translates to: APGLETPSGDGRTAGSSELLSST*EHLGPH
Trigger: GTGCGGCCCGAGGTGCTCCCAGGTGCTACTCAGCAG...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp CAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGGACCGGAATTGTAGGCAACTaGAGGTCGGGGTCCGCCGCC +
Preference number: 2 (lower is better)
Translates to: QCWEHLQVEQWQQLATRTGIVGN*RSGSAA
Trigger: GGCGGCGGACCCCGACCTCCAGTTGCCTACAATTCC...GGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCGCCTCCGGTGAGGCCTaGGGTCTGGTGGGTTGCAGG +
Preference number: 2 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVASGEA*GLVGCR
Trigger: CCTGCAACCCACCAGACCCCAGGCCTCACCGGAGGC...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGGGGGGCACTGCCTGCTaGAATCCACAGAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQGGTAC*NPQKGP
Trigger: TGGGCCTTTCTGTGGATTCCAGCAGGCAGTGCCCCC...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR GCA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTGGAGGGGGCACTGCCTaGTGGAATCCACAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVGGGTA*WNPQKG
Trigger: GCCTTTCTGTGGATTCCAGCAGGCAGTGCCCCCTCC...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR GCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCCACGTCTGGGGTCTCTaGACTGCCCGCCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVHVWGL*TARLCP
Trigger: TGGGCAGAGGCGGGCAGTGCAGAGACCCCAGACGTG...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp ACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCTGGGGGCCCAGGCAGTaGACGTGGAGGGGACAGGAG +
Preference number: 2 (lower is better)
Translates to: TSSPNVLLLDTGLRVQSSWGPRQ*TWRGQE
Trigger: CTCCTGTCCCCTCCACGTCCACTGCCTGGGCCCCCA...GCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGACATTAGGGGAGGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CAA 90 bp GTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCACTGTCTaGCCGAGAGGGAGGGTGTGCCTTCTGCTCACTGAGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: VLLLDTGLRVQSSTV*PRGRVCLLLTEGVL
Trigger: CAGGACCCCCTCAGTGAGCAGAAGGCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATACCCACCTGTGGGCTGTaGGGTGCTGGGCGCCATGGG +
Preference number: 2 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRIPTCGL*GAGRHG
Trigger: CCCATGGCGCCCAGCACCCCACAGCCCACAGGTGGG...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GTGGCAGGCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTGCCGTCTGGCCACAATaGTCTGGGAGCCCTTCCAAG +
Preference number: 2 (lower is better)
Translates to: VAGYWSTPPWLGPGRIPLAVWPQ*SGSPSK
Trigger: CTTGGAAGGGCTCCCAGACCATTGTGGCCAGACGGC...AAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCAGGCTGCATGTCAGGATaGCCTCGCTGCCCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPGCMSG*PRCPQH
Trigger: GTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCC...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GTGGCAGGCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTCGTCTGGCCCTGGCCTaGCCTTGCACTACACACACA +
Preference number: 2 (lower is better)
Translates to: VAGYWSTPPWLGPGRIPLRLALA*PCTTHT
Trigger: TGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACG...AAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCAGGTGGACAGGAGGCTaGACCGAGGGGGAAGTGTGG +
Preference number: 2 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVRWTGG*TEGEVW
Trigger: CCACACTTCCCCCTCGGTCCAGCCTCCTGTCCACCT...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR TCA 90 bp GTGGCAGGCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTCAGCACCCCCAGCCTTaGATACACGTGAATCCCTCC +
Preference number: 2 (lower is better)
Translates to: VAGYWSTPPWLGPGRIPLQHPQP*IHVNPS
Trigger: GGAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTG...AAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR TCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAAGGCCGAGGCAGGAGCTaGTGGAGGGGACTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKGRGRS*WRGLCP
Trigger: AGGGCAGAGTCCCCTCCATCAGCTCCTGCCTCGGCC...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR TCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTGCCCACCTGGCCATCTaGAACTCTGGAAGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVAHLAI*NSGRRR
Trigger: CCGCCTCCTTCCAGAGTTTCAGATGGCCAGGTGGGC...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp AGCCCACGGTGTCCAAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGAGGGTCGGGGTCTTTCTaGGACCTGCTGATGCCTGGT +
Preference number: 2 (lower is better)
Translates to: SPRCPNSAPEAPFALLIRGSGSF*DLLMPG
Trigger: ACCAGGCATCAGCAGGTCCCAGAAAGACCCCGACCC...TCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTTGGACACCGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGGCCATCTGAAACTCTaGAAGGAGGCGGTGGCCGAA +
Preference number: 2 (lower is better)
Translates to: APGLETPSGDGRTAGSSEGHLKL*KEAVAE
Trigger: TTCGGCCACCGCCTCCTTCCAGAGTTTCAGATGGCC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR TCA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTCCCCCGGCACTGCTCTaGAATAAACATAGGTGGACA +
Preference number: 2 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVPPALL*NKHRWT
Trigger: TGTCCACCTATGTTTATTTCAGAGCAGTGCCGGGGG...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR GCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGCCACCAGGTCCTCCCTaGAGGGTGGCGGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGPPGPP*RVAGDR
Trigger: CCTGTCCCCCGCCACCCTGCAGGGAGGACCTGGTGG...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCTGGCCACAGGGCCTTTaGGGTCGGGGTCTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAWPQGL*GRGLSG
Trigger: CCCAGAAAGACCCCGACCCCAAAGGCCCTGTGGCCA...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCAGGACGTCTGGCCCTaGCCTGGCCTTGCACTACAC +
Preference number: 2 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAQDVWP*PGLALH
Trigger: GTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCCTG...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCAGCGGGGGACAGGGTGTaGCAGGCTATTGGAGCACCC +
Preference number: 2 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPAGDRV*QAIGAP
Trigger: GGGTGCTCCAATAGCCTGCCACACCCTGTCCCCCGC...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCTCTGGAAGGAGGCGGTaGCCGAATTGTGGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVSGRRR*PNCGFS
Trigger: GCTGAACCCACAATTCGGCCACCGCCTCCTTCCAGA...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR GCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCACTGCACTGCACAGAGTaGAGGGATACTCCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPLHCTE*RDTPQV
Trigger: CACCTGGGGAGTATCCCTGCACTCTGTGCAGTGCAG...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGCAGACCCCTGGCACCTaGACTGCACAGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQQTPGT*TAQSAG
Trigger: CCCTGCACTCTGTGCAGTGCAGGTGCCAGGGGTCTG...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTGGAGGGTGTGCCTTCTaGTCACTGAGGGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: DPLTCGTRKITASISRSCGGCAF*SLRGSW
Trigger: CCAGGACCCCCTCAGTGAGCAGAAGGCACACCCTCC...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCAAGAAGCAGGAGAGGGTaGGATGACAGGGGTCGCTGT +
Preference number: 2 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPRSRRG*DDRGRC
Trigger: ACAGCGACCCCTGTCATCCCACCCTCTCCTGCTTCT...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCATGGAGCACCCCTCCCTaGCTGGGACCAGGAAGAATT +
Preference number: 2 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPWSTPP*LGPGRI
Trigger: AATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCA...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAAGGTGTGGCAGGCTATTaGAGCACCCCTCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKGVAGY*STPPWL
Trigger: CAGCCAGGGAGGGGTGCTCCAATAGCCTGCCACACC...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGCTGTCATGGCTGTGGTaGCCGCAGTGGCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGLSWLW*PQWPQG
Trigger: GCCCTGTGGCCACTGCGGCCACCACAGCCATGACAG...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAAGGCCTGGGGTCTGGTaGGTTGCAGGAAAAATAAAG +
Preference number: 2 (lower is better)
Translates to: APGLETPSGDGRTAGSSERPGVW*VAGKIK
Trigger: CTTTATTTTTCCTGCAACCCACCAGACCCCAGGCCT...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CAA 90 bp AAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGAGACATTaGCTTTCTGGGCTAACCCTGCTCCATCCATCCCACCGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: KLSSRGSLCPADQRH*LSGLTLLHPSHRCA
Trigger: AGCACACCGGTGGGATGGATGGAGCAGGGTTAGCCCAGAAAGCAAATGTCTCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CAA 90 bp GCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTaGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATAAATCCTTT +
Preference number: 2 (lower is better)
Translates to: AIGAPLPGWDQEEFP*VIVFLVPSGKDKSF
Trigger: AAAGGATTTATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR TCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGCCACCGGTGTGCTGCTaGGGGGCTAAGGACAGAGAG +
Preference number: 2 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMPPVCC*GAKDRE
Trigger: CTCTCTGTCCTTAGCCCCTCAGCAGCACACCGGTGG...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR TCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGCCTGTCTGGGGAGCCTaGGTGTCCACCCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGPVWGA*VSTQQQ
Trigger: CTGTTGCTGGGTGGACACTCAGGCTCCCCAGACAGG...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGAGGCCAGTCTTTGGCTaGATGTCAGGATGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQRPVFG*MSGWPR
Trigger: GCGAGGCCATCCTGACATGCAGCCAAAGACTGGCCT...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGGCCCTGGCCTGGCCTTaGACTACACACACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMALAWP*TTHTAS
Trigger: GGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGC...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGTGCCCCCAGGGGAGCTaGTCTGGATGGCCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMCPQGS*SGWPRK
Trigger: CTTCCTAGGCCATCCAGAGCAGCTCCCCTGGGGGCA...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAACTTGGATCAGAGAGATaGAGGGCCAGGGCACTACCC +
Preference number: 2 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKLGSER*RARALP
Trigger: GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAG...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTAGGCAGGACGGGGTGTaGGGCGAGCAGCGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCRQDGV*GEQRFS
Trigger: GGAGAAACGCTGCTCGCCCCACACCCCGTCCTGCCT...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTCTGAGTCATTTCCCTTaGACTTCTGTAGAAAAGGGC +
Preference number: 2 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVLSHFP*TSVEKG
Trigger: GCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAG...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR TCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCTTTGGAAGCTGAACTaGTCCCTGAATCCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLALWKLN*SLNPLA
Trigger: AGCCAGGGGATTCAGGGATCAGTTCAGCTTCCAAAG...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTTCAGGATGGCCTCGCTaGCCCCAGCACCTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLSGWPR*PQHLSS
Trigger: AGAGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGA...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGGTTCCTGCAGCCGTCTaGCCACAATGGTCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGVPAAV*PQWSGS
Trigger: GCTCCCAGACCATTGTGGCCAGACGGCTGCAGGAAC...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATAATCCTTTCAGACCCCTaGCACCTGCACTGCACAGAG +
Preference number: 2 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRIILSDP*HLHCTE
Trigger: CTCTGTGCAGTGCAGGTGCCAGGGGTCTGAAAGGAT...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp ACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCAGGAAGAATTCCCCTTaGTCATCGTCTTCCTGGTGC +
Preference number: 2 (lower is better)
Translates to: TSSPNVLLLDTGLRVQSSRKNSP*SSSSWC
Trigger: GCACCAGGAAGACGATGACCAAGGGGAATTCTTCCT...GCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGACATTAGGGGAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTCAGGTCCCTTGTGGCTaGGCCAACCTATGTCTGAAG +
Preference number: 2 (lower is better)
Translates to: DPLTCGTRKITASISRSCQVPCG*ANLCLK
Trigger: CTTCAGACATAGGTTGGCCCAGCCACAAGGGACCTG...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTGACCAAGTCAGCGACTaGAATTGTAGGCAACTGGAG +
Preference number: 2 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVDQVSD*NCRQLE
Trigger: CTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTC...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAGAGGCTCCTAACAGGTaGGGCACCTGCAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: ARILPESFPLDFCRKGPIEAPNR*GTCSLA
Trigger: GGCCAGGCTGCAGGTGCCCCACCTGTTAGGAGCCTC...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR GCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTGCAGACCAGCGTCCCTaGAGGGTCCAGCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLADQRP*RVQLLS
Trigger: AGAAAGAAGCTGGACCCTGCAGGGACGCTGGTCTGC...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTAACTTACGACGGCTGTaGAGACCAGCGTCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLNLRRL*RPASLQ
Trigger: CTGCAGGGACGCTGGTCTGCACAGCCGTCGTAAGTT...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGAGAATCAGGTTTCCATaGCTGTCTGTGGCAGACCCC +
Preference number: 2 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQRIRFP*LSVADP
Trigger: GGGGTCTGCCACAGACAGGCATGGAAACCTGATTCT...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCATCATCGTCTTCCTGGTaGCCTCTGGGAAGGATAAAT +
Preference number: 2 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPSSSSW*PLGRIN
Trigger: ATTTATCCTTCCCAGAGGGCACCAGGAAGACGATGA...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGTGGTCATCGTCTTCCTaGTGCCCTCTGGGAAGGATA +
Preference number: 2 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQWSSSS*CPLGRI
Trigger: TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCA...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR TCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTGTGCACTTGCACATGTaGTATGGAGAGTATCTGGCC +
Preference number: 2 (lower is better)
Translates to: DPLTCGTRKITASISRSCVHLHM*YGEYLA
Trigger: GGCCAGATACTCTCCATATCACATGTGCAAGTGCAC...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCACCTGCCTCCTGTAAATaGCTCCTGCAGAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPPASCK*LLQKRK
Trigger: CTTCCTTTTCTGCAGGAGGCATTTACAGGAGGCAGG...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTTTTCCTCTCAGTTCCTaGAGCCGTCTGGCCACAATG +
Preference number: 2 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLFPLSS*SRLATM
Trigger: CATTGTGGCCAGACGGCTGCAGGAACTGAGAGGAAA...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR GCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGGTTTTTGCTTCTGTCTaGCCACCACAGGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMVFASV*PPQAQQ
Trigger: CTGCTGAGCCTGTGGTGGGCAGACAGAAGCAAAAAC...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGAGCCCTTCCAAGCAATaGCTTGAAGGGCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMSPSKQ*LEGQEE
Trigger: TTCCTCCTGCCCTTCAAGCCATTGCTTGGAAGGGCT...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGGAGACATTTGCTTTCTaGGCTAACCCTGCTCCATCC +
Preference number: 2 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGETFAF*ANPAPS
Trigger: GGATGGAGCAGGGTTAGCCCAGAAAGCAAATGTCTC...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CCA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTAAAGAACAGGTGTGGTaGCAGAAGCCAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCKEQVW*QKPVLG
Trigger: TCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTT...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CCA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTGCGGTGGCCGAATTGTaGGTTCAGCTTCATCTGATA +
Preference number: 2 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCAVAEL*VQLHLI
Trigger: TATCAGATGAAGCTGAACCCACAATTCGGCCACCGC...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR GCA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTTGTGTTGTAATCTCCTaGTGTCCCCAAGGCCAAGTT +
Preference number: 2 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCCVVIS*CPQGQV
Trigger: AACTTGGCCTTGGGGACAGCAGGAGATTACAACACA...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CAA 90 bp GCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTaGGACTTCTGTAGAAAAGGGCCAATACACTCCGGATTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: ALDSTSARILPESFP*DFCRKGPIHSGFLF
Trigger: AAAAAGAAATCCGGAGTGTATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR TCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACCTTGCAGGGGACAGTaGATACAAACAAAAATAGTT +
Preference number: 2 (lower is better)
Translates to: ARILPESFPLDFCRKGPIPCRGQ*IQTKIV
Trigger: AACTATTTTTGTTTGTATTCACTGTCCCCTGCAAGG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp GCAGGAGAGGGTGGGATGACAGGGGTCGCTGTACCCTaGCACCCACCTGTGGGCTGTGGGGTGCTGGGCGCC +
Preference number: 3 (lower is better)
Translates to: AGEGGMTGVAVP*HPPVGCGVLGA
Trigger: GGCGCCCAGCACCCCACAGCCCACAGGTGGGTGCCAGGGTACAGCGACCCCTGTCATCCCACCCTCTCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR TCA 72 bp GGCCAGGAGGGGCTGGTGTGTGGGCTCGGGACACTGTaGGTCCTATGCAGTGTCCCGTTGTGCCTCCCCCTC +
Preference number: 3 (lower is better)
Translates to: GQEGLVCGLGTL*VLCSVPLCLPL
Trigger: GAGGGGGAGGCACAACGGGACACTGCATAGGACTCACAGTGTCCCGAGCCCACACACCAGCCCCTCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp CCTGTCTGTGGCAGACCCCTGAGGGGGCAGGACGTCTaGCCCTGGCCTGGCCTTGCACTACACACACAGCCT +
Preference number: 3 (lower is better)
Translates to: PVCGRPLRGQDV*PWPGLALHTQP
Trigger: AGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCCTGCCCCCTCAGGGGTCTGCCACAGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 72 bp GGCCTCGCTGCCCCCAGCACCTTTCCTCTCAGTTCCTaGAGCCGTCTGGCCACAATGGTCTGGGAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: GLAAPSTFPLSS*SRLATMVWEPF
Trigger: GAAGGGCTCCCAGACCATTGTGGCCAGACGGCTGCAGGAACTGAGAGGAAAGGTGCTGGGGGCAGCGAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp AACAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTaGAGGTCGGGGTCCGCCGCCGCCCGTGAGCCTGGC +
Preference number: 3 (lower is better)
Translates to: NRTKSATGIVGN*RSGSAAAREPG
Trigger: GCCAGGCTCACGGGCGGCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp AGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTaGCAGCAGTTAGCAACCAGGACCGGACCCCCGGCA +
Preference number: 3 (lower is better)
Translates to: RSQCWEHLQVEQ*QQLATRTGPPA
Trigger: TGCCGGGGGTCCGGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR TCA 72 bp GGTGAGAGCAGAGGCCCACTCCAGCACCCCCAGCCTTaGATACACGTGAATCCCTCCGTTGGAGGGGAGCGA +
Preference number: 3 (lower is better)
Translates to: GESRGPLQHPQP*IHVNPSVGGER
Trigger: TCGCTCCCCTCCAACGGAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTGGAGTGGGCCTCTGCTCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 72 bp GAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATaGAGGGCCTGTCGGAAGGCACTTCCGGGTCAGCAG +
Preference number: 3 (lower is better)
Translates to: ECEGRDGPAAGG*RACRKALPGQQ
Trigger: CTGCTGACCCGGAAGTGCCTTCCGACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp AGGATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATaGAGGGCCAGGGCACTACCCAAGGGGCCAGGAGTC +
Preference number: 3 (lower is better)
Translates to: RISGAGLLGSER*RARALPKGPGV
Trigger: GACTCCTGGCCCCTTGGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGCCTGAGTCATTTCCCTaGGACTTCTGTAGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEPESFP*DFCRKG
Trigger: CCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGG...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR TCA 72 bp GAGGCCCACTCCAGCACCCCCAGCCTTGAATACACGTaGATCCCTCCGTTGGAGGGGAGCGAGAATCAGGTT +
Preference number: 3 (lower is better)
Translates to: EAHSSTPSLEYT*IPPLEGSENQV
Trigger: AACCTGATTCTCGCTCCCCTCCAACGGAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTGGAGTGGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 72 bp GTGGGGACACCACAGAGAAGCAACTTACGACGGCTGTaGAGACCAGCGTCCCTGCAGGGTCCAGCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: VGTPQRSNLRRL*RPASLQGPASF
Trigger: GAAAGAAGCTGGACCCTGCAGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTCTCTGTGGTGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp GAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCTTTaGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCA +
Preference number: 3 (lower is better)
Translates to: EAEAPLGDKASL*LHVRMASLPPA
Trigger: TGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCCTTATCTCCCAATGGTGCTTCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp CACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTaGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATA +
Preference number: 3 (lower is better)
Translates to: HPSLAGTRKNSP*SSSSWCPLGRI
Trigger: TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp AGGGTGTGGCAGGCTATTGGAGCACCCCTCCCTGGCTaGGACCAGGAAGAATTCCCCTTGGTCATCGTCTTC +
Preference number: 3 (lower is better)
Translates to: RVWQAIGAPLPG*DQEEFPLVIVF
Trigger: GAAGACGATGACCAAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCACACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp CTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTaGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTA +
Preference number: 3 (lower is better)
Translates to: LGKNRCGGRSQC*EHLQVEQWQQL
Trigger: TAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp CCAGGTCTAAACCTCGCAGCTGGGAAAGAACAGGTGTaGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: PGLNLAAGKEQV*WQKPVLGAPAG
Trigger: ACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTTTAGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CAA 90 bp CAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGGACCCAGCTTCATCTGATATaGGACTTGAGGCTCCGGCTG +
Preference number: 3 (lower is better)
Translates to: QCWEHLQVEQWQQLATRTQLHLI*DLRLRL
Trigger: CAGCCGGAGCCTCAAGTCCAATATCAGATGAAGCTG...GGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CAA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCGGGCTCAGGAACAGGTaGACCCAGGTGTCCTCAAGC +
Preference number: 3 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAGLRNR*TQVSSS
Trigger: GCTTGAGGACACCTGGGTCAACCTGTTCCTGAGCCC...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACCCAGCACCCCCAGCCTaGAATACACGTGAATCCCTC +
Preference number: 3 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHPAPPA*NTRESL
Trigger: GAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTGG...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTGAGGCGGTGGCCGAATaGTGGGTTCAGCTTCATCTG +
Preference number: 3 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVEAVAE*WVQLHL
Trigger: CAGATGAAGCTGAACCCACAATTCGGCCACCGCCTC...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR TCA 72 bp CAGTTAGCAACCAGGACCGGACCCCCGGCACTGCTCTaGAATAAACATAGGTGGACAGGAGGCTGGACCGAG +
Preference number: 3 (lower is better)
Translates to: QLATRTGPPALL*NKHRWTGGWTE
Trigger: CTCGGTCCAGCCTCCTGTCCACCTATGTTTATTTCAGAGCAGTGCCGGGGGTCCGGTCCTGGTTGCTAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR GCA 72 bp TCCCAACTTTGCACAATCTGCCCAGCCTCCCACGGCTaGCCTGGCACCAAGTCAGAAGCAGCTCTGCAAATG +
Preference number: 3 (lower is better)
Translates to: SQLCTICPASHG*PGTKSEAALQM
Trigger: CATTTGCAGAGCTGCTTCTGACTTGGTGCCAGGGCAGCCGTGGGAGGCTGGGCAGATTGTGCAAAGTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp TGGGAGATAAGGCCAGTCTTTGGCTGCATGTCAGGATaGCCTCGCTGCCCCCAGCACCTTTCCTCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: WEIRPVFGCMSG*PRCPQHLSSQF
Trigger: GAACTGAGAGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCCTTATCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp TCCTGCTTACATCTCACTGCCCAGAGCTGTGTCCCCTaGCCACTCCTATCCACAAGAAGCCCCAGAGAGGTG +
Preference number: 3 (lower is better)
Translates to: SCLHLTAQSCVP*PLLSTRSPREV
Trigger: CACCTCTCTGGGGCTTCTTGTGGATAGGAGTGGCCAGGGGACACAGCTCTGGGCAGTGAGATGTAAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CAA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGGTGGCCACAGGGCCTTaGGGGTCGGGGTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGVATGP*GSGSFW
Trigger: CCAGAAAGACCCCGACCCCAAAGGCCCTGTGGCCAC...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp GTGGCAGGCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTAGGAGGAAGACGACTTaGGAAGCTGAACTGATCCCT +
Preference number: 3 (lower is better)
Translates to: VAGYWSTPPWLGPGRIPLRRKTT*EAELIP
Trigger: AGGGATCAGTTCAGCTTCCAAAGTCGTCTTCCTCCT...AAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGGGCCCTGGCCTGGCCTaGCACTACACACACAGCCTC +
Preference number: 3 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGGPGLA*HYTHSL
Trigger: GAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCC...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR TCA 72 bp ATTGGACTTGAGGCTCCGGCTGCAACAGGTCTGAGATaGCACATCCATCGGAGGTGGCCACCGAGACACAGT +
Preference number: 3 (lower is better)
Translates to: IGLEAPAATGLR*HIHRRWPPRHS
Trigger: ACTGTGTCTCGGTGGCCACCTCCGATGGATGTGTCATCTCAGACCTGTTGCAGCCGGAGCCTCAAGTCCAAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR TCA 72 bp CTGATATTGGACTTGAGGCTCCGGCTGCAACAGGTCTaGGATGACACATCCATCGGAGGTGGCCACCGAGAC +
Preference number: 3 (lower is better)
Translates to: LILDLRLRLQQV*DDTSIGGGHRD
Trigger: GTCTCGGTGGCCACCTCCGATGGATGTGTCATCTCAGACCTGTTGCAGCCGGAGCCTCAAGTCCAATATCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR GCA 72 bp ATCTGGGCACTTTGGGTCCCAGGCAGTGGGGTTCTGTaGGTAAGGAAGAATGTGAGGGTAGAGATGGGCCAG +
Preference number: 3 (lower is better)
Translates to: IWALWVPGSGVL*VRKNVRVEMGQ
Trigger: CTGGCCCATCTCTACCCTCACATTCTTCCTTACGCACAGAACCCCACTGCCTGGGACCCAAAGTGCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp GCACCCCCAGCCTTGAATACACGTGAATCCCTCCGTTaGAGGGGAGCGAGAATCAGGTTTCCATGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: APPALNTRESLR*RGARIRFPCLS
Trigger: AGACAGGCATGGAAACCTGATTCTCGCTCCCCTCCAACGGAGGGATTCACGTGTATTCAAGGCTGGGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp TGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTaGCTAGCCCCTGCCTCCTGTAAATGCCTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: WVRRLPGNPPIF*LAPASCKCLLQ
Trigger: CTGCAGGAGGCATTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp ACTTTGCACAATCTGCCCAGCCTCCCACGGCTGCCCTaGCACCAAGTCAGAAGCAGCTCTGCAAATGGATTC +
Preference number: 3 (lower is better)
Translates to: TLHNLPSLPRLP*HQVRSSSANGF
Trigger: GAATCCATTTGCAGAGCTGCTTCTGACTTGGTGCCAGGGCAGCCGTGGGAGGCTGGGCAGATTGTGCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp GACTCAAGGGAAGGACCCAGGTCTAAACCTCGCAGCTaGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCT +
Preference number: 3 (lower is better)
Translates to: DSREGPRSKPRS*ERTGVVAEASA
Trigger: AGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTTTAGACCTGGGTCCTTCCCTTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp GGGACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTaGTGCCCTCTGGGAAGGATAAATCCTTTCAGACCC +
Preference number: 3 (lower is better)
Translates to: GTRKNSPWSSSS*CPLGRINPFRP
Trigger: GGGTCTGAAAGGATTTATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGCAGGAAGAATTCCCCTaGGTCATCGTCTTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLQEEFP*VIVFLV
Trigger: CACCAGGAAGACGATGACCAAGGGGAATTCTTCCTG...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 72 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTaGCCTCTGGGAAGGATAAATCCTTTCAGACCCCTG +
Preference number: 3 (lower is better)
Translates to: TRKNSPWSSSSW*PLGRINPFRPL
Trigger: CAGGGGTCTGAAAGGATTTATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTCTATGCAGTGTCCCGTaGTGCCTCCCCCTCCTTTTC +
Preference number: 3 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCLCSVP*CLPLLF
Trigger: GAAAAGGAGGGGGAGGCACAACGGGACACTGCATAG...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR-3UTR CAA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTGAGGCAGAAGCACCATaGGGAGATAAGGCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLEAEAP*GDKASL
Trigger: AAGACTGGCCTTATCTCCCAATGGTGCTTCTGCCTC...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR TCA 72 bp CCAACACAGAAAGAAAACAGGCCGTGGAGGCAGCAGTaGGCAAACTCTTTACTCCTCGGATTCTCCACCATC +
Preference number: 3 (lower is better)
Translates to: PTQKENRPWRQQ*ANSLLLGFSTI
Trigger: GATGGTGGAGAATCCGAGGAGTAAAGAGTTTGCTCACTGCTGCCTCCACGGCCTGTTTTCTTTCTGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR GCA 72 bp TGTGTACATGTGCGTGTGCATGCCTGTGTGTGTGCATaGATGTGTGTGTGTGCATGTGTGCACTTGCACATG +
Preference number: 3 (lower is better)
Translates to: CVHVRVHACVCA*MCVCACVHLHM
Trigger: CATGTGCAAGTGCACACATGCACACACACACATGCATGCACACACACAGGCATGCACACGCACATGTACACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTGCTGATCAGAGACATTaGCTTTCTGGGCTAACCCTG +
Preference number: 3 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLADQRH*LSGLTL
Trigger: CAGGGTTAGCCCAGAAAGCAAATGTCTCTGATCAGC...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR TCA 72 bp GCCTCCATCTCACGGAGCTGTGAGCCCAGAATACAATaGTATGATGATACAATGATACGAGCACAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: ASISRSCEPRIQ*YDDTMIRAQPR
Trigger: CCTGGGCTGTGCTCGTATCATTGTATCATCATATCATTGTATTCTGGGCTCACAGCTCCGTGAGATGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR-3UTR CAA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACTCCGGATTTCTTTTTaGGGAAAGGAGGGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: ARILPESFPLDFCRKGPILRISF*GKEGGS
Trigger: GCTGCCTCCCTCCTTTCCCAAAAAAGAAATCCGGAG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR TCA 72 bp GCTGTGAGCCCAGAATACAATGATATGATGATACAATaGTACGAGCACAGCCCAGGAGAACTCACCCTCAGC +
Preference number: 3 (lower is better)
Translates to: AVSPEYNDMMIQ*YEHSPGELTLS
Trigger: GCTGAGGGTGAGTTCTCCTGGGCTGTGCTCGTATCATTGTATCATCATATCATTGTATTCTGGGCTCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR GCA 72 bp TGTGCATGCCTGTGTGTGTGCATGCATGTGTGTGTGTaGATGTGTGCACTTGCACATGTGATATGGAGAGTA +
Preference number: 3 (lower is better)
Translates to: CACLCVCMHVCV*MCALAHVIWRV
Trigger: TACTCTCCATATCACATGTGCAAGTGCACACATGCACACACACACATGCATGCACACACACAGGCATGCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CCA 72 bp CAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTTaGACTTCTGTAGAAAAGGGCCAATACACTCCGGAT +
Preference number: 3 (lower is better)
Translates to: QPLLGFSLSHFP*TSVEKGQYTPD
Trigger: ATCCGGAGTGTATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp GAGGTGGCCACCGAGACACAGTATAAATCAGAGCATTaGATTCAACCTCTGCTAGGATTCTCCCTGAGTCAT +
Preference number: 3 (lower is better)
Translates to: EVATETQYKSEH*IQPLLGFSLSH
Trigger: ATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTTATACTGTGTCTCGGTGGCCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CCA 72 bp AAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTaGGGCGTGGAGGAAGGGATGACTTTTAAGAACTTT +
Preference number: 3 (lower is better)
Translates to: KPEPQTWTTEAL*GVEEGMTFKNF
Trigger: AAAGTTCTTAAAAGTCATCCCTTCCTCCACGCCCCACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGCACCTGGGAGCACCTCGGGCCGCACCCTTCTCACCGCCCGGCCTCGGACGCCGCACGCGGTGCGCGCTaGAGGATGACATGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: STWEHLGPHPSHRPASDAARGAR*RMTCRG
Trigger: CCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGC...GGCGTCCGAGGCCGGGCGGTGAGAAGGGTGCGGCCCGAGGTGCTCCCAGGTGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGTCACCGGGCCTCCGGTaGGGCCTGGGGTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAESPGLR*GLGSGG
Trigger: CCCACCAGACCCCAGGCCTCACCGGAGGCCCGGTGA...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGCACCTGGGAGCACCTCGGGCCGCACCCTTCTCACCGCCCGGCCTCGGACGCCCACGTCTGGGGTCTCTaGACTGCCCGCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: STWEHLGPHPSHRPASDAHVWGL*TARLCP
Trigger: TGGGCAGAGGCGGGCAGTGCAGAGACCCCAGACGTG...GGCGTCCGAGGCCGGGCGGTGAGAAGGGTGCGGCCCGAGGTGCTCCCAGGTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGCACCTGGGAGCACCTCGGGCCGCACCCTTCTCACCGCCCGGCCTCGGACGCCGGGCCAGGTCCGGGTTaGAGGCGTCACACTCGTTGC +
Preference number: 4 (lower is better)
Translates to: STWEHLGPHPSHRPASDAGPGPG*RRHTRC
Trigger: GCAACGAGTGTGACGCCTCCAACCCGGACCTGGCCC...GGCGTCCGAGGCCGGGCGGTGAGAAGGGTGCGGCCCGAGGTGCTCCCAGGTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp AGCACCTGGGAGCACCTCGGGCCGCACCCTTCTCACCGCCCGGCCTCGGACGCCGCCCACCTGGCCATCTaGAACTCTGGAAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: STWEHLGPHPSHRPASDAAHLAI*NSGRRR
Trigger: CCGCCTCCTTCCAGAGTTTCAGATGGCCAGGTGGGC...GGCGTCCGAGGCCGGGCGGTGAGAAGGGTGCGGCCCGAGGTGCTCCCAGGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGATGAGCCTGGGCGGGTaGGCCAGGTCCGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWMSLGG*ARSGLE
Trigger: CTCCAACCCGGACCTGGCCCACCCGCCCAGGCTCAT...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGCACCTGGGAGCACCTCGGGCCGCACCCTTCTCACCGCCCGGCCTCGGACGCCGGCAGAAGCCAGTGCTaGGAGCACCTGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: STWEHLGPHPSHRPASDAGRSQC*EHLQVE
Trigger: CTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCC...GGCGTCCGAGGCCGGGCGGTGAGAAGGGTGCGGCCCGAGGTGCTCCCAGGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCATCGGCCCCCGCGGTaGCCAGTGCTCCCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQHRPPR*PVLPPR
Trigger: ACGGGGCGGGAGCACTGGTCACCGCGGGGGCCGATG...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGGCTCTGCCGAGCCGTTaGGGTAGTAGCCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEALPSR*GSSPAG
Trigger: GCCGGCTGGGCTACTACCGCAACGGCTCGGCAGAGC...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp AGCACCTGGGAGCACCTCGGGCCGCACCCTTCTCACCGCCCGGCCTCGGACGCCGCTCCACCTTCACCTTaGCGTAGTCCTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: STWEHLGPHPSHRPASDAAPPSP*RSPSGA
Trigger: TGCGCCTGAAGGACTACGTCAAGGTGAAGGTGGAGC...GGCGTCCGAGGCCGGGCGGTGAGAAGGGTGCGGCCCGAGGTGCTCCCAGGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp TCTCTGCCCAGGGCTGCCGACCCTCCCACCCCAAGAGAGGCAGGGACCCAGGCTGGTAGGGCTGCCAGGTaGGCCCGTTGTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SLPRAADPPTPREAGTQAGRAAR*ARCPGT
Trigger: AGTCCCTGGACAACGGGCGCACCTGGCAGCCCTACC...AGCCTGGGTCCCTGCCTCTCTTGGGGTGGGAGGGTCGGCAGCCCTGGGCAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGGGTAGGGCTGCCAGGTaGGCCCGTTGTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEGRAAR*ARCPGT
Trigger: AGTCCCTGGACAACGGGCGCACCTGGCAGCCCTACC...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCCCCGCTGCACATAGGTaGCGCCCAGCGCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: AGLQGPRRQKHHWEIRPVPAAHR*RPAPGA
Trigger: TGCGCCCGGCGCTGGGCGGCACCTATGTGCAGCGGG...GACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp TCTCTGCCCAGGGCTGCCGACCCTCCCACCCCAAGAGAGGCAGGGACCCAGGCTCAGTGGCACAGGCGTTaGGAGAGCCATGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLPRAADPPTPREAGTQAQWHRR*ESHGAA
Trigger: CGCTGCCCCATGGCTCTCCCAACGCCTGTGCCACTG...AGCCTGGGTCCCTGCCTCTCTTGGGGTGGGAGGGTCGGCAGCCCTGGGCAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGAGGCAGGACGGGGTGTaGGGCGAGCAGCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAERQDGV*GEQRFS
Trigger: GGAGAAACGCTGCTCGCCCCACACCCCGTCCTGCCT...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGGGAATTGTAGGCAACTaGAGGTCGGGGTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWGIVGN*RSGSAA
Trigger: GGCGGCGGACCCCGACCTCCAGTTGCCTACAATTCC...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGCCAGCAGATGCAGCATaGCTGCGCAGTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWPADAA*LRSLQR
Trigger: CCTCTGCAGACTGCGCAGCCATGCTGCATCTGCTGG...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGAGCAGCACTGTCTTGCCGAGAGGGAGGGTGTGCCTTCTGCTCACTGAGGGGGGGGTGCTGGGCGCCATaGGGGCCCAGGCAGTGGACG +
Preference number: 4 (lower is better)
Translates to: RAALSCREGGCAFCSLRGGCWAP*GPRQWT
Trigger: CGTCCACTGCCTGGGCCCCCATGGCGCCCAGCACCC...CCCCCTCAGTGAGCAGAAGGCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCT
68% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGTGCGCGCTGGAGGATaGCATGTCGCGGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEVRAGG*HVAGPA
Trigger: CGCCGGGCCCGCGACATGTCATCCTCCAGCGCGCAC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp TCTCTGCCCAGGGCTGCCGACCCTCCCACCCCAAGAGAGGCAGGGACCCAGGCTGGCTCAGGAACAGGTTaGCCCAGGTGTCCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SLPRAADPPTPREAGTQAGSGTG*PRCPQA
Trigger: GGCTTGAGGACACCTGGGTCAACCTGTTCCTGAGCC...AGCCTGGGTCCCTGCCTCTCTTGGGGTGGGAGGGTCGGCAGCCCTGGGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGGAGCACAGGTTGGCGTaGAGGTTGCACTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWEHRLA*RLHLHL
Trigger: CAGGTGCAAGTGCAACCTGCACGCCAACCTGTGCTC...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGGCATGGAGCACAGGTTaGCGTGCAGGTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWAWSTG*RAGCTC
Trigger: GCAAGTGCAACCTGCACGCCAACCTGTGCTCCATGC...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp TCTCTGCCCAGGGCTGCCGACCCTCCCACCCCAAGAGAGGCAGGGACCCAGGCTGGGTCTGCTCCCGGCTaGCTCTTTGACATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLPRAADPPTPREAGTQAGSAPG*LFDIGQ
Trigger: CTGGCCAATGTCAAAGAGCCAGCCGGGAGCAGACCC...AGCCTGGGTCCCTGCCTCTCTTGGGGTGGGAGGGTCGGCAGCCCTGGGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGCAGGGACCCGAGCACTaGAGCTTTGCAAACAGCGAG +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEQGPEH*SFANSE
Trigger: CTCGCTGTTTGCAAAGCTTCAGTGCTCGGGTCCCTG...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGTGCTCGCACTCGCACTaGAGGCTGCCCTCGCGCATG +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQCSHSH*RLPSRM
Trigger: CATGCGCGAGGGCAGCCTGCAGTGCGAGTGCGAGCA...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGGGGCCGGTGGTGTTGTaGTCGCACTCGCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQGPVVL*SHSHCR
Trigger: CCTGCAGTGCGAGTGCGAGCACAACACCACCGGCCC...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGAATTCTTCTTGCACTTaGCGCAGTCGGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAENSSCT*RSRGRW
Trigger: CCACCGGCCCCGACTGCGGCAAGTGCAAGAAGAATT...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCAGGGCTGCGAGCCGCTaGTCCTTCCCCGCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVRAASR*SFPAPL
Trigger: GAGCGGCGCGGGGAAGGAGCAGCGGCTCGCAGCCCT...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGCTCATCATCCAGCTCTaGCGAGCCGTTGCGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWLIIQL*RAVAVV
Trigger: TACTACCGCAACGGCTCGGCAGAGCTGGATGATGAG...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGTGCAGTGTCCCGTTGTaGCTCCCCCTCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWCSVPL*LPLLFC
Trigger: ACAGAAAAGGAGGGGGAGGCACAACGGGACACTGCA...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTGGAGGTCGGGGTCCGCCGCTCTACCAGGCGAGGGTaGCCGGGGTGTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QDQVSDWNCRQLEVGVRRSTRRG*PGCPRD
Trigger: GTCCCTGGGACACCCCGGCCACCCTCGCCTGGTAGA...GCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGCGTAGAACTCCCAGGTaGGGCCCTCATCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAERRTPR*GPHLWS
Trigger: TGACCACAGATGAGGGCCCCACCTGGGAGTTCTACG...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGCAAAGGAACCTGCAGTaGCACAGGCGTTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEQRNLQ*HRRWES
Trigger: GCTCTCCCAACGCCTGTGCCACTGCAGGTTCCTTTG...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCGCCCTCTCGGCTCACTaGCTTCCCAGCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ISGAGLLGSERWRARALPALSAH*LPSQGP
Trigger: GGGCCCCTGGCTGGGAAGCCAGTGAGCCGAGAGGGC...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTGGGCAGGCGCAGCGCTaGTTCTGCAGGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVGQAQR*FCRQVP
Trigger: AGGCACCTGCCTGCAGAACCAGCGCTGCGCCTGCCC...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTCCTCCTTGTCGAACATaGGCCTGGGCGGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPPPCRT*AWAGGP
Trigger: TGGCCCACCCGCCCAGGCTCATGTTCGACAAGGAGG...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCGGTAGCGGCTCCAGGTaGTGCTCTGCCAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGLQGPRRQKHHWEIRPVGSGSR*CSASRW
Trigger: CCACCTACTGGCAGAGCATCACCTGGAGCCGCTACC...GACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGACTTCTCCAGGACCATaGCCGTGGGCCGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQTSPGP*PWAGRT
Trigger: AGTACGGCCGGCCCACGGTCATGGTCCTGGAGAAGT...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGCGCAGGGATCCTGCATaGGGCTGGATCAGATTGCTT +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAERRDPA*GWIRLL
Trigger: AAGCAATCTGATCCAGCCTCATGCAGGATCCCTGCG...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGTGTTGTGCTTGCAGCTaGCGCAGGTCACCACATTCA +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWCCACS*RRSPHS
Trigger: TGAATGTGGTGACCTGCGTCAGCTGCAAGCACAACA...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGGTGCAGAGCACGCGGTaGGCGCTGGAGGATGACATG +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQVQSTR*ALEDDM
Trigger: CATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCAC...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTCCCGCTGCACATAGGTaGCGCCCAGCGCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVPAAHR*RPAPGA
Trigger: TGCGCCCGGCGCTGGGCGGCACCTATGTGCAGCGGG...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGAGCAGCACTGTCTTGCCGAGAGGGAGGGTGTGCCTTCTGCTCACTGAGGGGGTGCTCGCACTCGCACTaGAGGCTGCCCTCGCGCATG +
Preference number: 4 (lower is better)
Translates to: RAALSCREGGCAFCSLRGCSHSH*RLPSRM
Trigger: CATGCGCGAGGGCAGCCTGCAGTGCGAGTGCGAGCA...CCCCCTCAGTGAGCAGAAGGCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTGGGCCGGTGGTGTTGTaGTCGCACTCGCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPGPVVL*SHSHCR
Trigger: CCTGCAGTGCGAGTGCGAGCACAACACCACCGGCCC...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGCGTAGCATTCGCAGTTaGCAAAGGAACCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWRSIRS*QRNLQW
Trigger: CCACTGCAGGTTCCTTTGGCAACTGCGAATGCTACG...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCAAACAGGTGGGGCACCTaGAGCCTGGCCGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGANRWGT*SLAAGW
Trigger: CCACCCCGCGGCCAGGCTGCAGGTGCCCCACCTGTT...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCTCTACCAGGCGAGGGTaGCCGGGGTGTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ISGAGLLGSERWRARALPSTRRG*PGCPRD
Trigger: GTCCCTGGGACACCCCGGCCACCCTCGCCTGGTAGA...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCGCACGCGGTGCGCGCTaGAGGATGACATGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: ISGAGLLGSERWRARALPARGAR*RMTCRG
Trigger: CCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGC...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGGACCCAGTGGCACAGGCGTTaGGAGAGCCATGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: QCWEHLQVEQWQQLATRTQWHRR*ESHGAA
Trigger: CGCTGCCCCATGGCTCTCCCAACGCCTGTGCCACTG...GGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGAGCAGCACTGTCTTGCCGAGAGGGAGGGTGTGCCTTCTGCTCACTGAGGGGGGCGGGGGACAGGGTGTaGCAGGCTATTGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: RAALSCREGGCAFCSLRGAGDRV*QAIGAP
Trigger: GGGTGCTCCAATAGCCTGCCACACCCTGTCCCCCGC...CCCCCTCAGTGAGCAGAAGGCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTGGAGGTCGGGGTCCGCCGCGAGGCTCCTAACAGGTaGGGCACCTGCAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QDQVSDWNCRQLEVGVRREAPNR*GTCSLA
Trigger: GGCCAGGCTGCAGGTGCCCCACCTGTTAGGAGCCTC...GCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGACAACTGAGGCTTTGTaGGGCGTGGAGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAETTEAL*GVEEGM
Trigger: CATCCCTTCCTCCACGCCCCACAAAGCCTCAGTTGT...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GGACGTCTGGCCCTGGCCTGGCCTTGCACTACACACACAGCCTCCACATTCCCAGGGGGTCTCCACATGTaGTGCCTGAGGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GRLALAWPCTTHTASTFPGGLHM*CLRAPP
Trigger: AGGTGGAGCCCTCAGGCATCACATGTGGAGACCCCC...TGGGAATGTGGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCATCCTCCCCCAGACGGTaGGTTCCGTGGTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGASSPRR*VPWSPG
Trigger: GCCCGGTGACCACGGAACTCACCGTCTGGGGGAGGA...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp CAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGGACCACTCGCACTGCAGGCTaGCCTCGCGCATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: QCWEHLQVEQWQQLATRTTRTAG*PRAWST
Trigger: TGTGCTCCATGCGCGAGGGCAGCCTGCAGTGCGAGT...GGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTCAGACCCCTGGCACCTaGACTGCACAGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPQTPGT*TAQSAG
Trigger: CCCTGCACTCTGTGCAGTGCAGGTGCCAGGGGTCTG...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCACCACCAGGTCCTCCCTaGAGGGTGGCGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPPPGPP*RVAGDR
Trigger: CCTGTCCCCCGCCACCCTGCAGGGAGGACCTGGTGG...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTCCAGCCTCCCACGGCTaGCCTGGCACCAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPPASHG*PGTKSE
Trigger: TTCTGACTTGGTGCCAGGGCAGCCGTGGGAGGCTGG...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGAGCAGCACTGTCTTGCCGAGAGGGAGGGTGTGCCTTCTGCTCACTGAGGGGGCCGAGAGGGAGGGTGTaGCTTCTGCTCACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RAALSCREGGCAFCSLRGPRGRV*LLLTEG
Trigger: CCCCTCAGTGAGCAGAAGGCACACCCTCCCTCTCGG...CCCCCTCAGTGAGCAGAAGGCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCACCCACCTGTGGGCTGTaGGGTGCTGGGCGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPPTCGL*GAGRHG
Trigger: CCCATGGCGCCCAGCACCCCACAGCCCACAGGTGGG...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCGGCTGCATGTCAGGATaGCCTCGCTGCCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ISGAGLLGSERWRARALPGCMSG*PRCPQH
Trigger: GTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCC...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GGACGTCTGGCCCTGGCCTGGCCTTGCACTACACACACAGCCTCCACATTCCCAGCACCCCTCCCTGGCTaGGACCAGGAAGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: GRLALAWPCTTHTASTFPAPLPG*DQEEFP
Trigger: GGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGC...TGGGAATGTGGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTCTCCCACGGCTGCCCTaGCACCAAGTCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPLPRLP*HQVRSS
Trigger: GCTGCTTCTGACTTGGTGCCAGGGCAGCCGTGGGAG...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACGTCGTCGCACACGTTaGGGTAGCAGCCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGARRRTR*GSSPGA
Trigger: GGCGCCAGGGCTGCTACCCCAACGTGTGCGACGACG...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGAAAGAACAGGTGTGGTaGCAGAAGCCAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEKEQVW*QKPVLG
Trigger: TCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTT...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGGTAGCGGCTCCAGGTaGTGCTCTGCCAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEGSGSR*CSASRW
Trigger: CCACCTACTGGCAGAGCATCACCTGGAGCCGCTACC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTGTGCGCGCTGGAGGATaGCATGTCGCGGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: DPLTCGTRKITASISRSCVRAGG*HVAGPA
Trigger: CGCCGGGCCCGCGACATGTCATCCTCCAGCGCGCAC...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCAAGAGCGCCAGCAGATaGAGCATGGCTGCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: AGLQGPRRQKHHWEIRPVKSASR*SMAAQS
Trigger: AGACTGCGCAGCCATGCTGCATCTGCTGGCGCTCTT...GACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGGACCAGAGGTTGTCCATGTTaGGCAGGTCGGGGCCGGCAA +
Preference number: 4 (lower is better)
Translates to: QCWEHLQVEQWQQLATRTRGCPC*AGRGRQ
Trigger: TTGCCGGCCCCGACCTGCGCAACATGGACAACCTCT...GGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCCCGCCAGGACCGGGTaGGGAAATTCTTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQPARTG*GNSSCT
Trigger: AGTGCAAGAAGAATTTCCGCACCCGGTCCTGGCGGG...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGAATCCGCAGGGATCCTaGATGAGGCTGGATCAGATT +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAENPQGS*MRLDQI
Trigger: AATCTGATCCAGCCTCATGCAGGATCCCTGCGGATT...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGCGGGGAGGGGGCACTaGCTGCTGGAATCCACAGAA +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEAGRGH*LLESTE
Trigger: TTCTGTGGATTCCAGCAGGCAGTGCCCCCTCCCCGC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAACCAGCTGCAGGAGGATaGAGGGCCTGTCGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEPAAGG*RACRKA
Trigger: TGCCTTCCGACAGGCCCTGCATCCTCCTGCAGCTGG...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp ACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCGGCCCAGAGAAGCCCTaGAGAGGCAGCGACGGGGTC +
Preference number: 4 (lower is better)
Translates to: TSSPNVLLLDTGLRVQSSGPEKP*RGSDGV
Trigger: GACCCCGTCGCTGCCTCTCCAGGGCTTCTCTGGGCC...GCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGACATTAGGGGAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACCGGGGCCGGCAAAGATaGCGAAGCGGTCCCGCACCT +
Preference number: 4 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHRGRQR*RSGPAP
Trigger: AGGTGCGGGACCGCTTCGCCATCTTTGCCGGCCCCG...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGCCCACGGTGTCCAAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGAGGCTGCCCTCGCGCATaGAGCACAGGTTGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: SPRCPNSAPEAPFALLIRGCPRA*STGWRA
Trigger: TGCACGCCAACCTGTGCTCCATGCGCGAGGGCAGCC...TCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTTGGACACCGTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCGGCTGCCCTCGCGCATaGAGCACAGGTTGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVGCPRA*STGWRA
Trigger: TGCACGCCAACCTGTGCTCCATGCGCGAGGGCAGCC...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGCCCACGGTGTCCAAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGACCGGGAGGGACAACTTaGGTGGGATGTGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPRCPNSAPEAPFALLIRPGGTT*VGCGAP
Trigger: TGGGGCCCCACATCCCACCCAAGTTGTCCCTCCCGG...TCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTTGGACACCGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGCCCACGGTGTCCAAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGACCCCTGTCATGGCTGTaGTGGCCGCAGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SPRCPNSAPEAPFALLIRPLSWL*WPQWPQ
Trigger: CTGTGGCCACTGCGGCCACCACAGCCATGACAGGGG...TCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTTGGACACCGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GGACGTCTGGCCCTGGCCTGGCCTTGCACTACACACACAGCCTCCACATTCCCACGTCTGGCCCTGGCCTaGCCTTGCACTACACACACA +
Preference number: 4 (lower is better)
Translates to: GRLALAWPCTTHTASTFPRLALA*PCTTHT
Trigger: TGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACG...TGGGAATGTGGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTTTCCATGCCTGTCTGTaGCAGACCCCTGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPFHACL*QTPEGA
Trigger: TGCCCCCTCAGGGGTCTGCCACAGACAGGCATGGAA...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCGGTGTGGCAGGCTATTaGAGCACCCCTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ISGAGLLGSERWRARALPGVAGY*STPPWL
Trigger: CAGCCAGGGAGGGGTGCTCCAATAGCCTGCCACACC...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCCTTGGATCAGAGAGATaGAGGGCCAGGGCACTACCC +
Preference number: 4 (lower is better)
Translates to: AGLQGPRRQKHHWEIRPVLGSER*RARALP
Trigger: GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAG...GACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGTGCACGGAGCCTATCTaGTTGCAGTTACACTCAATG +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWCTEPI*LQLHSM
Trigger: CATTGAGTGTAACTGCAACCAGATAGGCTCCGTGCA...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGTTCTGGCACAGCAGCTaGTCGTCGTCGCACACGTTG +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQFWHSS*SSSHTL
Trigger: CAACGTGTGCGACGACGACCAGCTGCTGTGCCAGAA...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTGCCTCCGGTGAGGCCTaGGGTCTGGTGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVASGEA*GLVGCR
Trigger: CCTGCAACCCACCAGACCCCAGGCCTCACCGGAGGC...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTGGGGGCACTGCCTGCTaGAATCCACAGAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVGGTAC*NPQKGP
Trigger: TGGGCCTTTCTGTGGATTCCAGCAGGCAGTGCCCCC...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGTGTGGCCCCAGGGCTaGAGACACCAAGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEVWPQG*RHQAEM
Trigger: CATCTCCGCTTGGTGTCTCCAGCCCTGGGGCCACAC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAAGGTGGACAGGAGGCTaGACCGAGGGGGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSERWTGG*TEGEVW
Trigger: CCACACTTCCCCCTCGGTCCAGCCTCCTGTCCACCT...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CAA 72 bp GGCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATaGGGAGATAAGGCCAGTCTTTGGCTGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: GGAPGTTEAEAP*GDKASLWLHVR
Trigger: CCTGACATGCAGCCAAAGACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp CAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTGGAGGTCGGGGTCCGCCGCTGTTCCACGAAAGGGTaGTGTTGGCTTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QDQVSDWNCRQLEVGVRRCSTKG*CWLPAG
Trigger: GCCCGCTGGAAGCCAACATCACCCTTTCGTGGAACA...GCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGTACCGAAGGCCTCCATaGAGTCCTCGGCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQYRRPP*SPRRRT
Trigger: AGTTCTACGCCGAGGACTGCATGGAGGCCTTCGGTA...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GGACGTCTGGCCCTGGCCTGGCCTTGCACTACACACACAGCCTCCACATTCCCACCAGGGGGAGGGGTTTaGAAGGTGCCAAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: GRLALAWPCTTHTASTFPPGGGV*KVPKEP
Trigger: AGGTTCCTTTGGCACCTTGCAAACCCCTCCCCCTGG...TGGGAATGTGGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTCCCTGGCACCTGCACTaGACAGAGTGCAGGGATACT +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPPWHLH*TECRDT
Trigger: AGTATCCCTGCACTCTGTGCAGTGCAGGTGCCAGGG...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGGAGGGGGCACTGCCTaGTGGAATCCACAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEGGGTA*WNPQKG
Trigger: GCCTTTCTGTGGATTCCAGCAGGCAGTGCCCCCTCC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGTGTGTTGTAATCTCCTaGTGTCCCCAAGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAECVVIS*CPQGQV
Trigger: AACTTGGCCTTGGGGACAGCAGGAGATTACAACACA...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCTGCTTACATCTCACTaGCCAGAGCTGTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQLLTSH*PELCPL
Trigger: CAGGGGACACAGCTCTGGGCAGTGAGATGTAAGCAG...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAAGCAGTGCAGAGGTTaGAGCCAAGGCAGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVKQCRG*SQGRCP
Trigger: GGGACACCTGCCTTGGCTGCAACCTCTGCACTGCTT...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GGACGTCTGGCCCTGGCCTGGCCTTGCACTACACACACAGCCTCCACATTCCCACAAAGGAACCTGCAGTaGCACAGGCGTTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GRLALAWPCTTHTASTFPQRNLQ*HRRWES
Trigger: GCTCTCCCAACGCCTGTGCCACTGCAGGTTCCTTTG...TGGGAATGTGGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTAGGGGGAAGGATCAGTaGGGCAGGTCTCCTTGGATC +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPRGKDQ*GRSPWI
Trigger: GATCCAAGGAGACCTGCCCCACTGATCCTTCCCCCT...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCAGGAGGGGCTGGTGTGTaGGCTCGGGACACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGAGGAGV*ARDTVS
Trigger: ACTCACAGTGTCCCGAGCCCACACACCAGCCCCTCC...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTGGAGGTCGGGGTCCGCCGCAGTAAGACAGGCAGGTaGTGCGGTGGCTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: QDQVSDWNCRQLEVGVRRSKTGR*CGGSCL
Trigger: CAGGCATGAGCCACCGCACCACCTGCCTGTCTTACT...GCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CAA 72 bp GCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTaGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: APLPGWDQEEFP*VIVFLVPSGKD
Trigger: ATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGACGTCTGGCCCTGGCCTGGCCTTGCACTACACACACAGCCTCCACATTCCCAGCCTCAGCATGGAAATaGCACATCTACCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GRLALAWPCTTHTASTFPASAWK*HIYQAR
Trigger: CCTCGCCTGGTAGATGTGGCATTTCCATGCTGAGGC...TGGGAATGTGGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGACGTCTGGCCCTGGCCTGGCCTTGCACTACACACACAGCCTCCACATTCCCATACCGAAGGCCTCCATaGAGTCCTCGGCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: GRLALAWPCTTHTASTFPYRRPP*SPRRRT
Trigger: AGTTCTACGCCGAGGACTGCATGGAGGCCTTCGGTA...TGGGAATGTGGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCGAGTACTCCTCGGTaGAGAGCACGCGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLASTPR*RARGAR
Trigger: GCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGC...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGTGGGGACACCACAGAGAAGCAACTTACGACGGCTGTGCAGACCAGCGTCCCTGAGCACAGGTTGGCGTaGAGGTTGCACTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: GGDTTEKQLTTAVQTSVPEHRLA*RLHLHL
Trigger: CAGGTGCAAGTGCAACCTGCACGCCAACCTGTGCTC...AGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTCTCTGTGGTGTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCAACTCGCACTGCAGGCTaGCCTCGCGCATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPTRTAG*PRAWST
Trigger: TGTGCTCCATGCGCGAGGGCAGCCTGCAGTGCGAGT...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTGGAGGTCGGGGTCCGCCGCTGCGGAAATTCTTCTTaGACTTGCCGCAGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: QDQVSDWNCRQLEVGVRRCGNSS*TCRSRG
Trigger: GCCCCGACTGCGGCAAGTGCAAGAAGAATTTCCGCA...GCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACGCCCTGGCCTGGCCTTaGACTACACACACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHALAWP*TTHTAS
Trigger: GGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGC...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCGTTTTTGCTTCTGTCTaGCCACCACAGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGLQGPRRQKHHWEIRPVVFASV*PPQAQQ
Trigger: CTGCTGAGCCTGTGGTGGGCAGACAGAAGCAAAAAC...GACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCCAACTTTGCACAATCTaGCCAGCCTCCCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: ISGAGLLGSERWRARALPQLCTI*PASHGC
Trigger: GCAGCCGTGGGAGGCTGGGCAGATTGTGCAAAGTTG...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGTTGCCAAAGGAACCTaGAGTGGCACAGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEVAKGT*SGTGVG
Trigger: CCCAACGCCTGTGCCACTGCAGGTTCCTTTGGCAAC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGGACCCTCGCGGCCTCAGCATaGAAATGCCACATCTACCAG +
Preference number: 4 (lower is better)
Translates to: QCWEHLQVEQWQQLATRTLAASA*KCHIYQ
Trigger: CTGGTAGATGTGGCATTTCCATGCTGAGGCCGCGAG...GGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCGGGCCAGGTCCGGGTTaGAGGCGTCACACTCGTTGC +
Preference number: 4 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAGPGPG*RRHTRC
Trigger: GCAACGAGTGTGACGCCTCCAACCCGGACCTGGCCC...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAAATGAGCCTGGGCGGGTaGGCCAGGTCCGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKMSLGG*ARSGLE
Trigger: CTCCAACCCGGACCTGGCCCACCCGCCCAGGCTCAT...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGCCCACGGTGTCCAAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGACGTGCTTCTCCTTCTTaGAGCCTGCCCAGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: SPRCPNSAPEAPFALLIRRASPS*SLPSAS
Trigger: ACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACG...TCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTTGGACACCGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GTGGCAGGCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTGCATGGAGCACAGGTTaGCGTGCAGGTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: VAGYWSTPPWLGPGRIPLAWSTG*RAGCTC
Trigger: GCAAGTGCAACCTGCACGCCAACCTGTGCTCCATGC...AAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAAGCCTCGCAGAGCAGATaGCGACCTCCCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKASQSR*RPPRGR
Trigger: CCTCCCCCTGGGAGGTCGCCATCTGCTCTGCGAGGC...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGCCCACAGAGCCCTGGTaGAGGGTGACGGTGCACCCC +
Preference number: 4 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQPTEPW*RVTVHP
Trigger: GGGGTGCACCGTCACCCTCCACCAGGGCTCTGTGGG...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTGGCCCCACAGAGCCCTaGTGGAGGGTGACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: DPLTCGTRKITASISRSCGPTEP*WRVTVH
Trigger: GTGCACCGTCACCCTCCACCAGGGCTCTGTGGGGCC...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAATGGGGGCCCAGGCAGTaGACGTGGAGGGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKWGPRQ*TWRGQE
Trigger: CTCCTGTCCCCTCCACGTCCACTGCCTGGGCCCCCA...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATAAGGGGGCAGGACGTCTaGCCCTGGCCTGGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRIRGQDV*PWPGLA
Trigger: TGCAAGGCCAGGCCAGGGCCAGACGTCCTGCCCCCT...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCCCCAAAGAGGATTCCTaGGTCAGGAGGCTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: ISGAGLLGSERWRARALPPKEDS*VRRLPG
Trigger: TCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGG...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTCAGGTGCCTCCGTTCTaGCACAGCAGCTGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVQVPPF*HSSWSS
Trigger: CGACGACCAGCTGCTGTGCCAGAACGGAGGCACCTG...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTAGCCTGGCCGCGGGGTaGAAAACTCTGCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVSLAAG*KTLPAK
Trigger: CTTGGCTGGCAGAGTTTTCCACCCCGCGGCCAGGCT...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GTGGCAGGCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTAGCCTTGAATACACGTaGATCCCTCCGTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VAGYWSTPPWLGPGRIPLSLEYT*IPPLEG
Trigger: CCCCTCCAACGGAGGGATTCACGTGTATTCAAGGCT...AAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACGGGATACTCCCCAGGTaGGTCCAGGTGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHGILPR*VQVRAE
Trigger: CTCTGCTCTCACCTGGACTCACCTGGGGAGTATCCC...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGCAACAGGTCTGAGATaGCACATCCATCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEATGLR*HIHRRW
Trigger: CCACCTCCGATGGATGTGTCATCTCAGACCTGTTGC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATACATGGCTGCGCAGTCTaGAGAGGCGCGGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRIHGCAV*RGAAQR
Trigger: TCTCTGGGCCGCGCCTCTGCAGACTGCGCAGCCATG...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGAGGCGTCACACTCGTTaGTGCATAGGTAGGGATTCT +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQRRHTR*CIGRDS
Trigger: AGAATCCCTACCTATGCAGCAACGAGTGTGACGCCT...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTTGTAAGCCCCACACCTaGCCACCGTCCCCAACACAG +
Preference number: 4 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVCKPHT*PPSPTQ
Trigger: CTGTGTTGGGGACGGTGGGCAGGTGTGGGGCTTACA...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp ACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCCCAGCAGATGCAGCATaGCTGCGCAGTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TSSPNVLLLDTGLRVQSSPADAA*LRSLQR
Trigger: CCTCTGCAGACTGCGCAGCCATGCTGCATCTGCTGG...GCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGACATTAGGGGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTCGTGCTTCTCCTTCTTaGAGCCTGCCCAGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVRASPS*SLPSAS
Trigger: ACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACG...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACGGGTCGGGGTCTTTCTaGGACCTGCTGATGCCTGGT +
Preference number: 4 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHGSGSF*DLLMPG
Trigger: ACCAGGCATCAGCAGGTCCCAGAAAGACCCCGACCC...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGCTGTCATGGCTGTGGTaGCCGCAGTGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLLSWLW*PQWPQG
Trigger: GCCCTGTGGCCACTGCGGCCACCACAGCCATGACAG...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACGTTCCTGCAGCCGTCTaGCCACAATGGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHVPAAV*PQWSGS
Trigger: GCTCCCAGACCATTGTGGCCAGACGGCTGCAGGAAC...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCATCCTTTCAGACCCCTaGCACCTGCACTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ISGAGLLGSERWRARALPILSDP*HLHCTE
Trigger: CTCTGTGCAGTGCAGGTGCCAGGGGTCTGAAAGGAT...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GGTGGGGACACCACAGAGAAGCAACTTACGACGGCTGTGCAGACCAGCGTCCCTAGCCAAACCCCTGTTTaGAGACAGGCACAGCACCCA +
Preference number: 4 (lower is better)
Translates to: GGDTTEKQLTTAVQTSVPSQTPV*RQAQHP
Trigger: TGGGTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCT...AGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTCTCTGTGGTGTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCGGCTGTAGGGGCCACTaGCTGTCACATTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSSPNVLLLDTGLRVQSSGCRGH*LSHWSH
Trigger: GTGGCTCCAATGTGACAGCCAGTGGCCCCTACAGCC...GCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGACATTAGGGGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGGCGGTGGCCGAATTGTaGGTTCAGCTTCATCTGATA +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQAVAEL*VQLHLI
Trigger: TATCAGATGAAGCTGAACCCACAATTCGGCCACCGC...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACTGTTCCACGAAAGGGTaGTGTTGGCTTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHCSTKG*CWLPAG
Trigger: GCCCGCTGGAAGCCAACATCACCCTTTCGTGGAACA...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCAACTTGCACCTGCCGATaGCCTCGATGTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGATCTCR*PRCWRW
Trigger: CCATCTCCAACATCGAGGTCATCGGCAGGTGCAAGT...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATACCACCGGTGTGCTGCTaGGGGGCTAAGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRIPPVCC*GAKDRE
Trigger: CTCTCTGTCCTTAGCCCCTCAGCAGCACACCGGTGG...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGGGCCGAGGCAGGAGCTaGTGGAGGGGACTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGGRGRS*WRGLCP
Trigger: AGGGCAGAGTCCCCTCCATCAGCTCCTGCCTCGGCC...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTGGGCCAACCTATGTCTaGAGTCCAGAATTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPGPTYV*SPEFSE
Trigger: CTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCC...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGTGCAGAGCACGCGGTaGGCGCTGGAGGATGACATG +
Preference number: 4 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLVQSTR*ALEDDM
Trigger: CATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCAC...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGCCCACGGTGTCCAAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGATGCGGAAATTCTTCTTaGACTTGCCGCAGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SPRCPNSAPEAPFALLIRCGNSS*TCRSRG
Trigger: GCCCCGACTGCGGCAAGTGCAAGAAGAATTTCCGCA...TCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTTGGACACCGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTCCAGTCCTCTCCTGCTaGCTCGCAGAGCAGATGGCG +
Preference number: 4 (lower is better)
Translates to: DPLTCGTRKITASISRSCPVLSC*LAEQMA
Trigger: CGCCATCTGCTCTGCGAGGCAGCAGGAGAGGACTGG...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCTGGCCAGTCCTCTCCTaGTGCCTCGCAGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAWPVLS*CLAEQM
Trigger: CATCTGCTCTGCGAGGCAGCAGGAGAGGACTGGCCA...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCAGCAGACCAGCGTCCCTaGAGGGTCCAGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPADQRP*RVQLLS
Trigger: AGAAAGAAGCTGGACCCTGCAGGGACGCTGGTCTGC...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp ACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCAACTTACGACGGCTGTaGAGACCAGCGTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSSPNVLLLDTGLRVQSSNLRRL*RPASLQ
Trigger: CTGCAGGGACGCTGGTCTGCACAGCCGTCGTAAGTT...GCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGACATTAGGGGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAATGCCCCCAGGGGAGCTaGTCTGGATGGCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKCPQGS*SGWPRK
Trigger: CTTCCTAGGCCATCCAGAGCAGCTCCCCTGGGGGCA...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATAGGAGGGTGTGCCTTCTaGTCACTGAGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRIGGCAF*SLRGSW
Trigger: CCAGGACCCCCTCAGTGAGCAGAAGGCACACCCTCC...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGGAAGTCAATGTAGCTaGAGCGGTTGGAGTGACCGT +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEGSQCS*SGWSDR
Trigger: ACGGTCACTCCAACCGCTGCAGCTACATTGACTTCC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCGGAGCCTATCTGGTTaGAGTTACACTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: RCGGRSQCWEHLQVEQWQRSLSG*SYTQCR
Trigger: TCTGCATTGAGTGTAACTGCAACCAGATAGGCTCCG...CTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAACCGGACCCCCGGCACTaGTCTGAAATAAACATAGGT +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSEPDPRH*SEINIG
Trigger: ACCTATGTTTATTTCAGAGCAGTGCCGGGGGTCCGG...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp ACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCCGTAGAACTCCCAGGTaGGGCCCTCATCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TSSPNVLLLDTGLRVQSSRRTPR*GPHLWS
Trigger: TGACCACAGATGAGGGCCCCACCTGGGAGTTCTACG...GCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGACATTAGGGGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGTGCTCTGCCAGTAGGTaGCCAGGCCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQCSASR*PGPPPP
Trigger: AGGAGGAGGAGGGCCTGGCCACCTACTGGCAGAGCA...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTCAGCCAGGGGCCCCCTaGGTCCGGGAGGGACAACTT +
Preference number: 4 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLQPGAP*VREGQL
Trigger: AAGTTGTCCCTCCCGGACCCAGGGGGCCCCTGGCTG...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTTGGCCACAGGGCCTTTaGGGTCGGGGTCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DPLTCGTRKITASISRSCWPQGL*GRGLSG
Trigger: CCCAGAAAGACCCCGACCCCAAAGGCCCTGTGGCCA...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCACAGGACGTCTGGCCCTaGCCTGGCCTTGCACTACAC +
Preference number: 4 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPQDVWP*PGLALH
Trigger: GTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCCTG...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTGACCAAGTCAGCGACTaGAATTGTAGGCAACTGGAG +
Preference number: 4 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVDQVSD*NCRQLE
Trigger: CTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTC...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGTATAAATCAGAGCATTaGATTCAACCTCTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWYKSEH*IQPLLG
Trigger: TCCTAGCAGAGGTTGAATCCAATGCTCTGATTTATA...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCTTGGGTCCCAGGCAGTaGGGTTCTGTGCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVLGPRQ*GSVRKE
Trigger: TTCCTTACGCACAGAACCCCACTGCCTGGGACCCAA...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCAGGGACCCGAGCACTaGAGCTTTGCAAACAGCGAG +
Preference number: 4 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAQGPEH*SFANSE
Trigger: CTCGCTGTTTGCAAAGCTTCAGTGCTCGGGTCCCTG...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCAGCACCCCCAGCCTTaGATACACGTGAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAQHPQP*IHVNPS
Trigger: GGAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTG...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GTGGCAGGCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTGTGCACTTGCACATGTaGTATGGAGAGTATCTGGCC +
Preference number: 4 (lower is better)
Translates to: VAGYWSTPPWLGPGRIPLVHLHM*YGEYLA
Trigger: GGCCAGATACTCTCCATATCACATGTGCAAGTGCAC...AAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCACAAACTTGGACAACTaGGGCTTTGTGGGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVTNLDN*GFVGRG
Trigger: TCCACGCCCCACAAAGCCTCAGTTGTCCAAGTTTGT...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTGGTGCCAAAGGAACCTaGAGTGGCACAGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: DPLTCGTRKITASISRSCGAKGT*SGTGVG
Trigger: CCCAACGCCTGTGCCACTGCAGGTTCCTTTGGCACC...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGCCCACGGTGTCCAAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGATTTCCTCTCAGTTCCTaGAGCCGTCTGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: SPRCPNSAPEAPFALLIRFPLSS*SRLATM
Trigger: CATTGTGGCCAGACGGCTGCAGGAACTGAGAGGAAA...TCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTTGGACACCGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGAGAGCAGCACTGTCTTaGCGAGAGGGAGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLRAALS*REGGCA
Trigger: GGCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCT...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCGGCAGTGGGGTTCTGTaGGTAAGGAAGAATGTGAGG +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVGSGVL*VRKNVR
Trigger: CCTCACATTCTTCCTTACGCACAGAACCCCACTGCC...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCACTCGCGGCCTCAGCATaGAAATGCCACATCTACCAG +
Preference number: 4 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPLAASA*KCHIYQ
Trigger: CTGGTAGATGTGGCATTTCCATGCTGAGGCCGCGAG...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCAGGTCCAGCTTCTTTCTaGCGCCCTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPGPASF*RPLGSL
Trigger: CAGTGAGCCGAGAGGGCGCCAGAAAGAAGCTGGACC...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTCTGTGGTGGCCGCAGTaGCCACAGGGCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLLWWPQ*PQGLWG
Trigger: ACCCCAAAGGCCCTGTGGCCACTGCGGCCACCACAG...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAAGCCGTCTGGCCACAATaGTCTGGGAGCCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKAVWPQ*SGSPSK
Trigger: CTTGGAAGGGCTCCCAGACCATTGTGGCCAGACGGC...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCAGGATGTAGAAAGAGGTaGGGTGTGCTGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPGCRKR*GVLPPG
Trigger: CCCTGGGGGCAGCACACCCCACCTCTTTCTACATCC...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCCACATCCATCGGAGGTaGCCACCGAGACACAGTATA +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVHIHRR*PPRHSI
Trigger: TATACTGTGTCTCGGTGGCCACCTCCGATGGATGTG...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAATCTAAACCTCGCAGCTaGGAAAGAACAGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: APGLETPSGDGRTAGSSESKPRS*ERTGVV
Trigger: CACCACACCTGTTCTTTCCCAGCTGCGAGGTTTAGA...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAAGCTCCACCTTCACCTTaGCGTAGTCCTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKAPPSP*RSPSGA
Trigger: TGCGCCTGAAGGACTACGTCAAGGTGAAGGTGGAGC...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGACTTCTCCAGGACCATaGCCGTGGGCCGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMTSPGP*PWAGRT
Trigger: AGTACGGCCGGCCCACGGTCATGGTCCTGGAGAAGT...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTCCTGTCTGGGGAGCCTaGGTGTCCACCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLPVWGA*VSTQQQ
Trigger: CTGTTGCTGGGTGGACACTCAGGCTCCCCAGACAGG...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCTGGTCACCCAGGATTTaGAGATGTCATAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVWSPRI*RCHSPQ
Trigger: CTGGGGACTATGACATCTGCAAATCCTGGGTGACCA...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GGTGGGGACACCACAGAGAAGCAACTTACGACGGCTGTGCAGACCAGCGTCCCTCGTCACACTCGTTGCTaGATAGGTAGGGATTCTCAT +
Preference number: 4 (lower is better)
Translates to: GGDTTEKQLTTAVQTSVPRHTRC*IGRDSH
Trigger: ATGAGAATCCCTACCTATGCAGCAACGAGTGTGACG...AGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTCTCTGTGGTGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATAAATTCTTCTTGCACTTaGCGCAGTCGGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRINSSCT*RSRGRW
Trigger: CCACCGGCCCCGACTGCGGCAAGTGCAAGAAGAATT...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGCCCGCCAGGACCGGGTaGGGAAATTCTTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQPARTG*GNSSCT
Trigger: AGTGCAAGAAGAATTTCCGCACCCGGTCCTGGCGGG...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTGCGCAGCGCTGGTTCTaGAGGCAGGTGCCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCAQRWF*RQVPPF
Trigger: GAACGGAGGCACCTGCCTGCAGAACCAGCGCTGCGC...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGTCAGGCGCATCACCTTaGGCTGGCAGGCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLSGASP*AGRRRT
Trigger: AGTTCTACGCCTGCCAGCCCAAGGTGATGCGCCTGA...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACGGGGCCGGCAAAGATaGCGAAGCGGTCCCGCACCT +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIRGRQR*RSGPAP
Trigger: AGGTGCGGGACCGCTTCGCCATCTTTGCCGGCCCCG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTGGAGGTCGGGGTCCGCCGCCCTCGATGTTGGAGATaGCGTAGAAGTACTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QDQVSDWNCRQLEVGVRRPRCWR*RRSTCR
Trigger: TCTACAAGTACTTCTACGCCATCTCCAACATCGAGG...GCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAACGTGAATCCCTCCGTTaGAGGGGAGCGAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKRESLR*RGARIR
Trigger: CCTGATTCTCGCTCCCCTCCAACGGAGGGATTCACG...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATATGGAGCACCCCTCCCTaGCTGGGACCAGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRIWSTPP*LGPGRI
Trigger: AATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCA...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AGCCCACGGTGTCCAAACTCAGCTCCAGAGGCTCCCTTTGCCCTGCTGATCAGAAATCCTCCAATCTTTTaGCTAGCCCCTGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SPRCPNSAPEAPFALLIRNPPIF*LAPASC
Trigger: ACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATT...TCTGATCAGCAGGGCAAAGGGAGCCTCTGGAGCTGAGTTTGGACACCGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCAGGTCCCTTGTGGCTaGGCCAACCTATGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAQVPCG*ANLCLK
Trigger: CTTCAGACATAGGTTGGCCCAGCCACAAGGGACCTG...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCAAGGCCTGGGGTCTGGTaGGTTGCAGGAAAAATAAAG +
Preference number: 4 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGARPGVW*VAGKIK
Trigger: CTTTATTTTTCCTGCAACCCACCAGACCCCAGGCCT...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTCAGGGCCGGCACGTCTaGGGTCTCTGCACTGCCCGC +
Preference number: 4 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPQGRHV*GLCTAR
Trigger: GCGGGCAGTGCAGAGACCCCAGACGTGCCGGCCCTG...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACCTCCTTGTCGAACATaGGCCTGGGCGGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIPPCRT*AWAGGP
Trigger: TGGCCCACCCGCCCAGGCTCATGTTCGACAAGGAGG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCGCGTGGAGGAAGGGATaGCTTTTAAGAACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVAWRKG*LLRTFW
Trigger: CCAGAAAGTTCTTAAAAGTCATCCCTTCCTCCACGC...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCCGAGCACTGAAGCTTTaGAAACAGCGAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVRALKL*KQRGTC
Trigger: ACAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCG...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTGCGAGTACTCCTCGGTaGAGAGCACGCGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPASTPR*RARGAR
Trigger: GCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGC...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCAACCTCGAAGCGCACGTaGTTCTCCTTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPTSKRT*FSFLEP
Trigger: AGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGT...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCACTTTCTCTCAGCATTTaGCCCTGTCTGGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPLSLSI*PCLGSL
Trigger: CAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAG...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTGACCCTCACCTCCCCTaGATTTCCCACTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLDPHLP*ISHSGL
Trigger: GAGGCCAGAGTGGGAAATGCAGGGGAGGTGAGGGTC...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GTGGCAGGCTATTGGAGCACCCCTCCCTGGCTGGGACCAGGAAGAATTCCCCTTCCTCGATGTTGGAGATaGCGTAGAAGTACTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VAGYWSTPPWLGPGRIPLPRCWR*RRSTCR
Trigger: TCTACAAGTACTTCTACGCCATCTCCAACATCGAGG...AAGGGGAATTCTTCCTGGTCCCAGCCAGGGAGGGGTGCTCCAATAGCCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp ACAGCCCAGGAGAACTCACCCTCAGCTACTGCAATGATCGTTTTCATTAATGGGAACTTGGGTGGGATGTaGGGCCCCACAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TAQENSPSATAMIVFINGNLGGM*GPTEPW
Trigger: CCAGGGCTCTGTGGGGCCCCACATCCCACCCAAGTT...CCCATTAATGAAAACGATCATTGCAGTAGCTGAGGGTGAGTTCTCCTGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
3UTR CAA 72 bp TATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTaGGAGACAGGCACAGCACCCACCACCACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: YGEYLASQPNPC*ETGTAPTTTVF
Trigger: AAAAACAGTGGTGGTGGGTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGCCCCAGAAGCATCTCTaGGATTTGGGGTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMPQKHL*DLGSAP
Trigger: GGGAGCAGACCCCAAATCTCAGAGATGCTTCTGGGG...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTCCAGAATTCTCAGAGTaGCCCATGTCTTCCACCCCA +
Preference number: 4 (lower is better)
Translates to: DPLTCGTRKITASISRSCPEFSE*PMSSTP
Trigger: TGGGGTGGAAGACATGGGTCACTCTGAGAATTCTGG...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAGGGCTCGGGACACTGTaGGTCCTATGCAGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIGLGTL*VLCSVP
Trigger: CGGGACACTGCATAGGACTCACAGTGTCCCGAGCCC...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACCGAGCACTGAAGCTTTaGAAACAGCGAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHRALKL*KQRGTC
Trigger: ACAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCG...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp ACAGCCCAGGAGAACTCACCCTCAGCTACTGCAATGATCGTTTTCATTAATGGGCTCCTTCTTGGAGCCTaGCCAGCGCGAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: TAQENSPSATAMIVFINGLLLGA*PARVLL
Trigger: GAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAG...CCCATTAATGAAAACGATCATTGCAGTAGCTGAGGGTGAGTTCTCCTGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp ACAGCCCAGGAGAACTCACCCTCAGCTACTGCAATGATCGTTTTCATTAATGGGAGAGGTTGTCCATGTTaGGCAGGTCGGGGCCGGCAA +
Preference number: 4 (lower is better)
Translates to: TAQENSPSATAMIVFINGRGCPC*AGRGRQ
Trigger: TTGCCGGCCCCGACCTGCGCAACATGGACAACCTCT...CCCATTAATGAAAACGATCATTGCAGTAGCTGAGGGTGAGTTCTCCTGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGAGGCCAGTCTTTGGCTaGATGTCAGGATGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGRPVFG*MSGWPR
Trigger: GCGAGGCCATCCTGACATGCAGCCAAAGACTGGCCT...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTCTGCACTGCACAGAGTaGAGGGATACTCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLLHCTE*RDTPQV
Trigger: CACCTGGGGAGTATCCCTGCACTCTGTGCAGTGCAG...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTATCATAAAATCCAGCTaGTTCTTCCTAAGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPIIKSS*FFLSLD
Trigger: ATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGAT...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAAGAAGCCGGTCTCGTTaGACCGGTCGTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIRSRSR*TGRARS
Trigger: GCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCT...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGAGCATCTCTGAGATTTaGGGTCTGCTCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMSISEI*GLLPAG
Trigger: GCCAGCCGGGAGCAGACCCCAAATCTCAGAGATGCT...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGAGCCCTTCCAAGCAATaGCTTGAAGGGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQSPSKQ*LEGQEE
Trigger: TTCCTCCTGCCCTTCAAGCCATTGCTTGGAAGGGCT...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCGAGACATTTGCTTTCTaGGCTAACCCTGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAETFAF*ANPAPS
Trigger: GGATGGAGCAGGGTTAGCCCAGAAAGCAAATGTCTC...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCAGATATGGAGAGTATCTaGCCTCCCAGCCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPDMESI*PPSQTP
Trigger: AGGGGTTTGGCTGGGAGGCCAGATACTCTCCATATC...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTGGCGCCAGTAGTGCGTaGGGAGGCAGTCGTCGCACT +
Preference number: 4 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPGASSA*GGSRRT
Trigger: AGTGCGACGACTGCCTCCCCACGCACTACTGGCGCC...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACTGAGTCATTTCCCTTaGACTTCTGTAGAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGALSHFP*TSVEKG
Trigger: GCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAG...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGACTTGCACCTGCCGATaGCCTCGATGTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGTCTCR*PRCWRW
Trigger: CCATCTCCAACATCGAGGTCATCGGCAGGTGCAAGT...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAACTCCCTTTGCCCTGCTaGTCAGAGACATTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKLPLPC*SETFAF
Trigger: GAAAGCAAATGTCTCTGATCAGCAGGGCAAAGGGAG...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACTCCTTCTTGGAGCCTaGCCAGCGCGAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPILLLGA*PARVLL
Trigger: GAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATACCTGCCTCCTGTAAATaGCTCCTGCAGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRIPASCK*LLQKRK
Trigger: CTTCCTTTTCTGCAGGAGGCATTTACAGGAGGCAGG...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTTCAGGCGCATCACCTTaGGCTGGCAGGCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCSGASP*AGRRRT
Trigger: AGTTCTACGCCTGCCAGCCCAAGGTGATGCGCCTGA...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTTGCTCTGCCAGTAGGTaGCCAGGCCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPCSASR*PGPPPP
Trigger: AGGAGGAGGAGGGCCTGGCCACCTACTGGCAGAGCA...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCAAGGAAGAATTCCCCTTaGTCATCGTCTTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPRKNSP*SSSSWC
Trigger: GCACCAGGAAGACGATGACCAAGGGGAATTCTTCCT...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGCTTTGGAAGCTGAACTaGTCCCTGAATCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMLWKLN*SLNPLA
Trigger: AGCCAGGGGATTCAGGGATCAGTTCAGCTTCCAAAG...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAAAGAGCGCCAGCAGATaGAGCATGGCTGCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIKSASR*SMAAQS
Trigger: AGACTGCGCAGCCATGCTGCATCTGCTGGCGCTCTT...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTACCTCGAAGCGCACGTaGTTCTCCTTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCTSKRT*FSFLEP
Trigger: AGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGT...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTAGAATCAGGTTTCCATaGCTGTCTGTGGCAGACCCC +
Preference number: 4 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLRIRFP*LSVADP
Trigger: GGGGTCTGCCACAGACAGGCATGGAAACCTGATTCT...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGTCATCGTCTTCCTGGTaGCCTCTGGGAAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQSSSSW*PLGRIN
Trigger: ATTTATCCTTCCCAGAGGGCACCAGGAAGACGATGA...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCATGCATGTGTGTGTGTaGATGTGTGCACTTGCACAT +
Preference number: 4 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAMHVCV*MCALAH
Trigger: ATGTGCAAGTGCACACATGCACACACACACATGCAT...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTTGCAGTTACACTCAATaGAGACGTTCTCATCATCCA +
Preference number: 4 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVCSYTQ*RRSHHP
Trigger: TGGATGATGAGAACGTCTGCATTGAGTGTAACTGCA...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTGATAAGGCCAGTCTTTaGCTGCATGTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLDKASL*LHVRMA
Trigger: GGCCATCCTGACATGCAGCCAAAGACTGGCCTTATC...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAGGCCATCTGAAACTCTaGAAGGAGGCGGTGGCCGAA +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIGHLKL*KEAVAE
Trigger: TTCGGCCACCGCCTCCTTCCAGAGTTTCAGATGGCC...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp CTGGCTGTCACATTGGAGCCACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGCCTCAGCTACTGCAATaGTCGTTTTCATTAATGGGG +
Preference number: 4 (lower is better)
Translates to: LAVTLEPPPPLMSCFLIQPQLLQ*SFSLMG
Trigger: CCCCATTAATGAAAACGATCATTGCAGTAGCTGAGG...CTGTATCAAGAAGCAGGACATTAGGGGAGGAGGTGGCTCCAATGTGACAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR TCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAAGGGCTCTTAATGGGTaGCGTGCTCAACACAACGGC +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIRALNG*RAQHNG
Trigger: GCCGTTGTGTTGAGCACGTCACCCATTAAGAGCCCT...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACCGTGGAGGCAGCAGTaGGCAAACTCTTTACTCCTC +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIPWRQQ*ANSLLL
Trigger: GAGGAGTAAAGAGTTTGCTCACTGCTGCCTCCACGG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAGCCTCAGCATGGAAATaGCACATCTACCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIASAWK*HIYQAR
Trigger: CCTCGCCTGGTAGATGTGGCATTTCCATGCTGAGGC...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR GCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGTGGTCACCCAGGATTTaGAGATGTCATAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMWSPRI*RCHSPQ
Trigger: CTGGGGACTATGACATCTGCAAATCCTGGGTGACCA...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGAGGCGTCACACTCGTTaGTGCATAGGTAGGGATTCT +
Preference number: 4 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMRRHTR*CIGRDS
Trigger: AGAATCCCTACCTATGCAGCAACGAGTGTGACGCCT...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGCACCACCACTGTTTTTaGTTCTGTCTGCCCACCACA +
Preference number: 4 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGHHHCF*FCLPTT
Trigger: TGTGGTGGGCAGACAGAAGCAAAAACAGTGGTGGTG...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGTGCATGTGTGCACTTaGACATGTGATATGGAGAGT +
Preference number: 4 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLVHVCT*TCDMES
Trigger: ACTCTCCATATCACATGTGCAAGTGCACACATGCAC...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTTCGTTGCACCGGTCGTaGACGGAGCCTATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPSLHRS*TEPIWL
Trigger: CAACCAGATAGGCTCCGTGCACGACCGGTGCAACGA...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp ACAGCCCAGGAGAACTCACCCTCAGCTACTGCAATGATCGTTTTCATTAATGGGTGGTCATCGTCTTCCTaGTGCCCTCTGGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: TAQENSPSATAMIVFINGWSSSS*CPLGRI
Trigger: TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCA...CCCATTAATGAAAACGATCATTGCAGTAGCTGAGGGTGAGTTCTCCTGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCAAATTGTGACAGTGGATaGAAATGGGATAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGANCDSG*KWDKEK
Trigger: TTTCTCCTTATCCCATTTCCATCCACTGTCACAATT...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTTCTGGAAGGAGGCGGTaGCCGAATTGTGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPSGRRR*PNCGFS
Trigger: GCTGAACCCACAATTCGGCCACCGCCTCCTTCCAGA...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAGACACCAAGCGGAGATaGGAGAACTGCTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIDTKRR*ENCWIL
Trigger: GAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTC...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAGGGAAAGAACAGGTGTaGTGGCAGAAGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIGKEQV*WQKPVL
Trigger: CAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCC...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTCGGCTGCAACAGGTCTaGGATGACACATCCATCGGA +
Preference number: 4 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPRLQQV*DDTSIG
Trigger: TCCGATGGATGTGTCATCTCAGACCTGTTGCAGCCG...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACCCCCGGCACTGCTCTaGAATAAACATAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIPPALL*NKHRWT
Trigger: TGTCCACCTATGTTTATTTCAGAGCAGTGCCGGGGG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTCTGCATTTCCCACTCTaGCCTCTGACTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLLHFPL*PLTFPL
Trigger: AAGAGGAAAAGTCAGAGGCCAGAGTGGGAAATGCAG...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATATTTATCTGGGCACTTTaGGTCCCAGGCAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIFIWAL*VPGSGV
Trigger: AACCCCACTGCCTGGGACCCAAAGTGCCCAGATAAA...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
3UTR CAA 72 bp TCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTaGGACTTCTGTAGAAAAGGGCCAATACACTCCGGA +
Preference number: 4 (lower is better)
Translates to: STSARILPESFP*DFCRKGPIHSG
Trigger: TCCGGAGTGTATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp ACAGCCCAGGAGAACTCACCCTCAGCTACTGCAATGATCGTTTTCATTAATGGGCTTGCACATGTGATATaGAGAGTATCTGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TAQENSPSATAMIVFINGLAHVI*RVSGLP
Trigger: TGGGAGGCCAGATACTCTCCATATCACATGTGCAAG...CCCATTAATGAAAACGATCATTGCAGTAGCTGAGGGTGAGTTCTCCTGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CCA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGAAGCAGCTCTGCAAATaGATTCCTCTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGKQLCK*IPLCVC
Trigger: ACACACACACAGAGGAATCCATTTGCAGAGCTGCTT...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR GCA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACGTCACACTCGTTGCTaGATAGGTAGGGATTCTCAT +
Preference number: 4 (lower is better)
Translates to: ARILPESFPLDFCRKGPIRHTRC*IGRDSH
Trigger: ATGAGAATCCCTACCTATGCAGCAACGAGTGTGACG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR TCA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTCCTTGCAGGGGACAGTaGATACAAACAAAAATAGTT +
Preference number: 4 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCPCRGQ*IQTKIV
Trigger: AACTATTTTTGTTTGTATTCACTGTCCCCTGCAAGG...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CCA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTGTGTTTTATTTTATCTaGGCACTTTGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPVFYFI*ALWVPG
Trigger: GCCTGGGACCCAAAGTGCCCAGATAAAATAAAACAC...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 90 bp CGTCGTCGCACACGTTGGGGTAGCAGCCCTGGCGCCAGTAGTGCGTaGGGAGGCAGTCGTCGCACTTGGGGCCCGCCGCGCCCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: RRRTRWGSSPGASSA*GGSRRTWGPPRPRG
Trigger: GCCGCGAGGGCGCGGCGGGCCCCAAGTGCGACGACTGCCTCCCCACGCACTACTGGCGCCAGGGCTGCTACCCCAACGTGTGCGACGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393229.4
ENST00000490694.1
CDS CCA 90 bp AGCAGCCCTGGCGCCAGTAGTGCGTGGGGAGGCAGTCGTCGCACTTaGGGCCCGCCGCGCCCTCGCGGCACTCGCAGAAGCCGGTCTCGT +
Preference number: 5 (lower is better)
Translates to: SSPGASSAWGGSRRT*GPPRPRGTRRSRSR
Trigger: ACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGGCGGGCCCCAAGTGCGACGACTGCCTCCCCACGCACTACTGGCGCCAGGGCTGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393229.4
ENST00000490694.1
CDS CCA 90 bp CACTCTGGACGGACACGGGCACGGGCGCGCGGTCAGGGCTACGTGTaGGCGCCGTCTTCTCGGACCCCCACTCTCCCGGCCTCGCAGGGA +
Preference number: 5 (lower is better)
Translates to: HSGRTRARARGQGYV*APSSRTPTLPASQG
Trigger: TCCCTGCGAGGCCGGGAGAGTGGGGGTCCGAGAAGACGGCGCCCACACGTAGCCCTGACCGCGCGCCCGTGCCCGTGTCCGTCCAGAGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS CCA 90 bp GCAGCATGGCTGCGCAGTCTGCAGAGGCGCGGCCCAGAGAAGCCCTaGAGAGGCAGCGACGGGGTCAGGCGGGACTCGCGGCCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: AAWLRSLQRRGPEKP*RGSDGVRRDSRPQH
Trigger: ATGCTGAGGCCGCGAGTCCCGCCTGACCCCGTCGCTGCCTCTCCAGGGCTTCTCTGGGCCGCGCCTCTGCAGACTGCGCAGCCATGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 90 bp CTGCCCAGCGCGAGTACTCCTCGGTGCAGAGCACGCGGTGCGCGCTaGAGGATGACATGTCGCGGGCCCGGCGGGCGGACATACCGAAGG +
Preference number: 5 (lower is better)
Translates to: LPSASTPRCRARGAR*RMTCRGPGGRTYRR
Trigger: CCTTCGGTATGTCCGCCCGCCGGGCCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS TCA 90 bp GCGCGAGTACTCCTCGGTGCAGAGCACGCGGTGCGCGCTGGAGGATaGCATGTCGCGGGCCCGGCGGGCGGACATACCGAAGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: ARVLLGAEHAVRAGG*HVAGPAGGHTEGLH
Trigger: ATGGAGGCCTTCGGTATGTCCGCCCGCCGGGCCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 90 bp AGGCAGCGACGGGGTCAGGCGGGACTCGCGGCCTCAGCATGGAAATaGCACATCTACCAGGCGAGGGTGGCCGGGGTGTCCCAGGGACCC +
Preference number: 5 (lower is better)
Translates to: RQRRGQAGLAASAWK*HIYQARVAGVSQGP
Trigger: GGGTCCCTGGGACACCCCGGCCACCCTCGCCTGGTAGATGTGGCATTTCCATGCTGAGGCCGCGAGTCCCGCCTGACCCCGTCGCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 90 bp TTGGAGCCTGCCCAGCGCGAGTACTCCTCGGTGCAGAGCACGCGGTaGGCGCTGGAGGATGACATGTCGCGGGCCCGGCGGGCGGACATA +
Preference number: 5 (lower is better)
Translates to: LEPAQREYSSVQSTR*ALEDDMSRARRADI
Trigger: TATGTCCGCCCGCCGGGCCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGGCAGTGGCACAGGCGTaGGGAGAGCCATGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEAVAQA*GEPWGS
Trigger: GCTGCCCCATGGCTCTCCCAACGCCTGTGCCACTGC...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS GCA 90 bp GCGGTCCCGCACCTCGAAGCGCACGTGCTTCTCCTTCTTGGAGCCTaGCCAGCGCGAGTACTCCTCGGTGCAGAGCACGCGGTGCGCGCT +
Preference number: 5 (lower is better)
Translates to: AVPHLEAHVLLLLGA*PARVLLGAEHAVRA
Trigger: AGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 90 bp CTGGAGAGGCAGCGACGGGGTCAGGCGGGACTCGCGGCCTCAGCATaGAAATGCCACATCTACCAGGCGAGGGTGGCCGGGGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LERQRRGQAGLAASA*KCHIYQARVAGVSQ
Trigger: CTGGGACACCCCGGCCACCCTCGCCTGGTAGATGTGGCATTTCCATGCTGAGGCCGCGAGTCCCGCCTGACCCCGTCGCTGCCTCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 90 bp ATGACATGTCGCGGGCCCGGCGGGCGGACATACCGAAGGCCTCCATaGAGTCCTCGGCGTAGAACTGGTAGGGCTGCCAGGTGCGCCCGT +
Preference number: 5 (lower is better)
Translates to: MTCRGPGGRTYRRPP*SPRRRTGRAARCAR
Trigger: ACGGGCGCACCTGGCAGCCCTACCAGTTCTACGCCGAGGACTGCATGGAGGCCTTCGGTATGTCCGCCCGCCGGGCCCGCGACATGTCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 90 bp CGTGCTTCTCCTTCTTGGAGCCTGCCCAGCGCGAGTACTCCTCGGTaGAGAGCACGCGGTGCGCGCTGGAGGATGACATGTCGCGGGCCC +
Preference number: 5 (lower is better)
Translates to: RASPSWSLPSASTPR*RARGARWRMTCRGP
Trigger: GGGCCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 90 bp TGGGGCCCGCCGCGCCCTCGCGGCACTCGCAGAAGCCGGTCTCGTTaGACCGGTCGTGCACGGAGCCTATCTGGTTGCAGTTACACTCTG +
Preference number: 5 (lower is better)
Translates to: WGPPRPRGTRRSRSR*TGRARSLSGCSYTL
Trigger: CAGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGGCGGGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS-3UTR CAA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGAGGGTGAAGAACTCCTaGAGGCCCTTGGCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWRVKNS*RPLALS
Trigger: GGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCCT...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS TCA 90 bp TGCTCTGCCAGTAGGTGGCCAGGCCCTCCTCCTCCTTGTCGAACATaGGCCTGGGCGGGTGGGCCAGGTCCGGGTTGGAGGCGTCACACT +
Preference number: 5 (lower is better)
Translates to: CSASRWPGPPPPCRT*AWAGGPGPGWRRHT
Trigger: AGTGTGACGCCTCCAACCCGGACCTGGCCCACCCGCCCAGGCTCATGTTCGACAAGGAGGAGGAGGGCCTGGCCACCTACTGGCAGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 90 bp GGGCCGGCAAAGATGGCGAAGCGGTCCCGCACCTCGAAGCGCACGTaGTTCTCCTTCTTGGAGCCTGCCCAGCGCGAGTACTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GPAKMAKRSRTSKRT*FSFLEPAQREYSSV
Trigger: CACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACCGCTTCGCCATCTTTGCCGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 90 bp TGGGGCCCGCCGCGCCCTCGCGGCACTCGCAGAAGCCGGTCTCGTTaGACCGGTCGTGCACGGAGCCTATCTGGTTGCAGTTACACTCAA +
Preference number: 5 (lower is better)
Translates to: WGPPRPRGTRRSRSR*TGRARSLSGCSYTQ
Trigger: TTGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGGCGGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 90 bp GTGGCCAGGCCCTCCTCCTCCTTGTCGAACATGAGCCTGGGCGGGTaGGCCAGGTCCGGGTTGGAGGCGTCACACTCGTTGCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: VARPSSSLSNMSLGG*ARSGLEASHSLLHR
Trigger: CCTATGCAGCAACGAGTGTGACGCCTCCAACCCGGACCTGGCCCACCCGCCCAGGCTCATGTTCGACAAGGAGGAGGAGGGCCTGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 90 bp TGGCGAAGCGGTCCCGCACCTCGAAGCGCACGTGCTTCTCCTTCTTaGAGCCTGCCCAGCGCGAGTACTCCTCGGTGCAGAGCACGCGGT +
Preference number: 5 (lower is better)
Translates to: WRSGPAPRSARASPS*SLPSASTPRCRARG
Trigger: ACCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACCGCTTCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 90 bp GTTGCACCGGTCGTGCACGGAGCCTATCTGGTTGCAGTTACACTCTaGACGGACACGGGCACGGGCGCGCGGTCAGGGCTACGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: VAPVVHGAYLVAVTL*TDTGTGARSGLRVG
Trigger: GCCCACACGTAGCCCTGACCGCGCGCCCGTGCCCGTGTCCGTCCAGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS-3UTR CAA 90 bp TCTCTGCCCAGGGCTGCCGACCCTCCCACCCCAAGAGAGGCAGGGACCCAGGCTGGGCTCAGGAACAGGTaGACCCAGGTGTCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: SLPRAADPPTPREAGTQAGLRNR*TQVSSS
Trigger: GCTTGAGGACACCTGGGTCAACCTGTTCCTGAGCCC...AGCCTGGGTCCCTGCCTCTCTTGGGGTGGGAGGGTCGGCAGCCCTGGGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS GCA 90 bp AGAAGCCGGTCTCGTTGCACCGGTCGTGCACGGAGCCTATCTGGTTaGAGTTACACTCTGGACGGACACGGGCACGGGCGCGCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: RSRSRCTGRARSLSG*SYTLDGHGHGRAVR
Trigger: CCTGACCGCGCGCCCGTGCCCGTGTCCGTCCAGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS CCA 90 bp TCGCAGAAGCCGGTCTCGTTGCACCGGTCGTGCACGGAGCCTATCTaGTTGCAGTTACACTCTGGACGGACACGGGCACGGGCGCGCGGT +
Preference number: 5 (lower is better)
Translates to: SQKPVSLHRSCTEPI*LQLHSGRTRARARG
Trigger: ACCGCGCGCCCGTGCCCGTGTCCGTCCAGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS-3UTR CAA 90 bp TCTCTGCCCAGGGCTGCCGACCCTCCCACCCCAAGAGAGGCAGGGACCCAGGCTAAATTCTTCTTGCACTaGCCGCAGTCGGGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: SLPRAADPPTPREAGTQAKFFLH*PQSGPV
Trigger: CACCGGCCCCGACTGCGGCAAGTGCAAGAAGAATTT...AGCCTGGGTCCCTGCCTCTCTTGGGGTGGGAGGGTCGGCAGCCCTGGGCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GGCCAGTCTTTGGCTGCATGTCAGGATGGCCTCGCTGCCCCCAGCACCTTTCCTGCAGTGGCACAGGCGTaGGGAGAGCCATGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GQSLAACQDGLAAPSTFPAVAQA*GEPWGS
Trigger: GCTGCCCCATGGCTCTCCCAACGCCTGTGCCACTGC...AGGAAAGGTGCTGGGGGCAGCGAGGCCATCCTGACATGCAGCCAAAGACTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS GCA 90 bp GCCTGGGCGGGTGGGCCAGGTCCGGGTTGGAGGCGTCACACTCGTTaGTGCATAGGTAGGGATTCTCATGGGAGCAGAACCTCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: AWAGGPGPGWRRHTR*CIGRDSHGSRTSQG
Trigger: CCCCTGAGAGGTTCTGCTCCCATGAGAATCCCTACCTATGCAGCAACGAGTGTGACGCCTCCAACCCGGACCTGGCCCACCCGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 90 bp TCCCAGGGTGGCCAGGCCTGGAGAGAAGACTCTGGCTTCCTTCCTTaGGATCAAACACGTCCCAGCCCCACCTTCCCCGCCCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: SQGGQAWREDSGFLP*DQTRPSPTFPALAL
Trigger: CAGTGCCAGGGCGGGGAAGGTGGGGCTGGGACGTGTTTGATCCCAAGGAAGGAAGCCAGAGTCTTCTCTCCAGGCCTGGCCACCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS-3UTR CAA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTTGGGCCAGGTCCGGGTaGGAGGCGTCACACTCGTTG +
Preference number: 5 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVWARSG*EASHSL
Trigger: CAACGAGTGTGACGCCTCCAACCCGGACCTGGCCCA...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAACTCCTTGAGGCCCTaGGCGCTCTCCAGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVNSLRP*ALSSRV
Trigger: CACGCGGCTGGAGAGCGCCAAGGGCCTCAAGGAGTT...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGTTTTATCTGGGCACTTaGGGTCCCAGGCAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEFYLGT*GPRQWG
Trigger: ACCCCACTGCCTGGGACCCAAAGTGCCCAGATAAAA...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 90 bp GCGTGTAGAGGTTGTCCATGTTGCGCAGGTCGGGGCCGGCAAAGATaGCGAAGCGGTCCCGCACCTCGAAGCGCACGTGCTTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: ACRGCPCCAGRGRQR*RSGPAPRSARASPS
Trigger: AGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACCGCTTCGCCATCTTTGCCGGCCCCGACCTGCGCAACATGGACAACCTCTACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS-3UTR CAA 90 bp CAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTGGAGGTCGGGGTCCGCCGCCACGAAAGGGTGATGTaGGCTTCCAGCGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QDQVSDWNCRQLEVGVRRHERVM*ASSGLG
Trigger: CCCCAGCCCGCTGGAAGCCAACATCACCCTTTCGTG...GCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp TGGTGGCAGAAGCCAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTACGTGCTTCTCCTTCTaGGAGCCTGCCCAGCGCGAG +
Preference number: 5 (lower is better)
Translates to: WWQKPVLGAPAGGAVAAVTCFSF*EPAQRE
Trigger: CTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGT...AACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTGGCTTCTGCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCTCGGGGCCGGTGGTGTaGTGCTCGCACTCGCACTGC +
Preference number: 5 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVSGPVV*CSHSHC
Trigger: GCAGTGCGAGTGCGAGCACAACACCACCGGCCCCGA...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp GGTGGGGACACCACAGAGAAGCAACTTACGACGGCTGTGCAGACCAGCGTCCCTGGCCCTGGCCTGGCCTaGCACTACACACACAGCCTC +
Preference number: 5 (lower is better)
Translates to: GGDTTEKQLTTAVQTSVPGPGLA*HYTHSL
Trigger: GAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCC...AGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTCTCTGTGGTGTCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCCCACTGGCTGTCACATaGGAGCCACCTCCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: AGLQGPRRQKHHWEIRPVPLAVT*EPPPPL
Trigger: TAGGGGAGGAGGTGGCTCCAATGTGACAGCCAGTGG...GACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp CAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGGACCCCTCGCGTGTTGTGCTaGCAGCTGACGCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: QCWEHLQVEQWQQLATRTPRVLC*QLTQVT
Trigger: GGTGACCTGCGTCAGCTGCAAGCACAACACGCGAGG...GGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp CCCCAGACGGTGAGTTCCGTGGTCACCGGGCCTCCGGTGAGGCCTGGGGTCTGGTCCCCAAGGCCAAGTTaGTTCCACTTGGTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: PQTVSSVVTGPPVRPGVWSPRPS*FHLVLA
Trigger: AGCTAAGACCAAGTGGAACAAACTTGGCCTTGGGGA...CCAGACCCCAGGCCTCACCGGAGGCCCGGTGACCACGGAACTCACCGTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS GCA 90 bp GCGCCCTCGCGGCACTCGCAGAAGCCGGTCTCGTTGCACCGGTCGTaGACGGAGCCTATCTGGTTGCAGTTACACTCAATGCAGACGTTC +
Preference number: 5 (lower is better)
Translates to: APSRHSQKPVSLHRS*TEPIWLQLHSMQTF
Trigger: GAACGTCTGCATTGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 90 bp GACTCGCGGCCTCAGCATGGAAATGCCACATCTACCAGGCGAGGGTaGCCGGGGTGTCCCAGGGACCCGAGCACTGAAGCTTTGCAAACA +
Preference number: 5 (lower is better)
Translates to: DSRPQHGNATSTRRG*PGCPRDPSTEALQT
Trigger: TGTTTGCAAAGCTTCAGTGCTCGGGTCCCTGGGACACCCCGGCCACCCTCGCCTGGTAGATGTGGCATTTCCATGCTGAGGCCGCGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS-3UTR CAA 90 bp TCTCTGCCCAGGGCTGCCGACCCTCCCACCCCAAGAGAGGCAGGGACCCAGGCTACAGCGAGGAACTTGTaGTTTCCAAAAGGCCGACAC +
Preference number: 5 (lower is better)
Translates to: SLPRAADPPTPREAGTQATARNL*FPKGRH
Trigger: GTGTCGGCCTTTTGGAAACAACAAGTTCCTCGCTGT...AGCCTGGGTCCCTGCCTCTCTTGGGGTGGGAGGGTCGGCAGCCCTGGGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCACGTGCTTCTCCTTCTaGGAGCCTGCCCAGCGCGAG +
Preference number: 5 (lower is better)
Translates to: ISGAGLLGSERWRARALPTCFSF*EPAQRE
Trigger: CTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGT...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GGTGGGGACACCACAGAGAAGCAACTTACGACGGCTGTGCAGACCAGCGTCCCTGCGTGCAGGTTGCACTaGCACCTGCCGATGACCTCG +
Preference number: 5 (lower is better)
Translates to: GGDTTEKQLTTAVQTSVPACRLH*HLPMTS
Trigger: CGAGGTCATCGGCAGGTGCAAGTGCAACCTGCACGC...AGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTCTCTGTGGTGTCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GGACGTCTGGCCCTGGCCTGGCCTTGCACTACACACACAGCCTCCACATTCCCAAGGTTGGCGTGCAGGTaGCACTTGCACCTGCCGATG +
Preference number: 5 (lower is better)
Translates to: GRLALAWPCTTHTASTFPRLACR*HLHLPM
Trigger: CATCGGCAGGTGCAAGTGCAACCTGCACGCCAACCT...TGGGAATGTGGAGGCTGTGTGTGTAGTGCAAGGCCAGGCCAGGGCCAGACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp CAGTGCTGGGAGCACCTGCAGGTGGAGCAGTGGCAGCAGTTAGCAACCAGGACCAGGTTGGCGTGCAGGTaGCACTTGCACCTGCCGATG +
Preference number: 5 (lower is better)
Translates to: QCWEHLQVEQWQQLATRTRLACR*HLHLPM
Trigger: CATCGGCAGGTGCAAGTGCAACCTGCACGCCAACCT...GGTCCTGGTTGCTAACTGCTGCCACTGCTCCACCTGCAGGTGCTCCCAGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp CAGGACCAAGTCAGCGACTGGAATTGTAGGCAACTGGAGGTCGGGGTCCGCCGCTGGACAACTGAGGCTTaGTGGGGCGTGGAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: QDQVSDWNCRQLEVGVRRWTTEA*WGVEEG
Trigger: CCCTTCCTCCACGCCCCACAAAGCCTCAGTTGTCCA...GCGGCGGACCCCGACCTCCAGTTGCCTACAATTCCAGTCGCTGACTTGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS TCA 90 bp CACAGAGCCCTGGTGGAGGGTGACGGTGCACCCCAGAAGCATCTCTaGGATTTGGGGTCTGCTCCCGGCTGGCTCTTTGACATTGGCCAG +
Preference number: 5 (lower is better)
Translates to: HRALVEGDGAPQKHL*DLGSAPGWLFDIGQ
Trigger: CTGGCCAATGTCAAAGAGCCAGCCGGGAGCAGACCCCAAATCTCAGAGATGCTTCTGGGGTGCACCGTCACCCTCCACCAGGGCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS GCA 90 bp CACCACAGAGAAGCAACTTACGACGGCTGTGCAGACCAGCGTCCCTaGAGGGTCCAGCTTCTTTCTGGCGCCCTCTCGGCTCACTGGCTT +
Preference number: 5 (lower is better)
Translates to: HHREATYDGCADQRP*RVQLLSGALSAHWL
Trigger: AAGCCAGTGAGCCGAGAGGGCGCCAGAAAGAAGCTGGACCCTGCAGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTCTCTGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS CCA 90 bp CCTTGGGCTGGCAGGCGTAGAACTCCCAGGTGGGGCCCTCATCTGTaGTCACCCAGGATTTGCAGATGTCATAGTCCCCAGAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: PWAGRRRTPRWGPHL*SPRICRCHSPQRPE
Trigger: CTCTGGCCTCTGGGGACTATGACATCTGCAAATCCTGGGTGACCACAGATGAGGGCCCCACCTGGGAGTTCTACGCCTGCCAGCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGAAGGCACTTCCGGGTCAGCAGGGTGCTGGGGGTGGGAGCAGAGCAAACAGCGAGGAACTaGTTGTTTCCAAAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: GPVGRHFRVSRVLGVGAEQTARN*LFPKGR
Trigger: TCGGCCTTTTGGAAACAACAAGTTCCTCGCTGTTTG...CTCTGCTCCCACCCCCAGCACCCTGCTGACCCGGAAGTGCCTTCCGACAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACTGGGCCAGGTCCGGGTaGGAGGCGTCACACTCGTTG +
Preference number: 5 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHWARSG*EASHSL
Trigger: CAACGAGTGTGACGCCTCCAACCCGGACCTGGCCCA...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCAGGGTGAAGAACTCCTaGAGGCCCTTGGCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ISGAGLLGSERWRARALPRVKNS*RPLALS
Trigger: GGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCCT...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp AGAGCAGCACTGTCTTGCCGAGAGGGAGGGTGTGCCTTCTGCTCACTGAGGGGGGCTGGCTCTTTGACATaGGCCAGTCCTCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: RAALSCREGGCAFCSLRGAGSLT*ASPLLL
Trigger: CAGCAGGAGAGGACTGGCCAATGTCAAAGAGCCAGC...CCCCCTCAGTGAGCAGAAGGCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTCAGAAGCCGGTCTCGTaGCACCGGTCGTGCACGGAG +
Preference number: 5 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVQKPVS*HRSCTE
Trigger: CTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTG...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS TCA 90 bp CCAGAAGCATCTCTGAGATTTGGGGTCTGCTCCCGGCTGGCTCTTTaGCATTGGCCAGTCCTCTCCTGCTGCCTCGCAGAGCAGATGGCG +
Preference number: 5 (lower is better)
Translates to: PEASLRFGVCSRLAL*HWPVLSCCLAEQMA
Trigger: CGCCATCTGCTCTGCGAGGCAGCAGGAGAGGACTGGCCAATGTCAAAGAGCCAGCCGGGAGCAGACCCCAAATCTCAGAGATGCTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS TCA 90 bp GCCGGCAGTGCTGGCAGTGCTGACCTCGCGTGTTGTGCTTGCAGCTaGCGCAGGTCACCACATTCAGGAAGTCAATGTAGCTGCAGCGGT +
Preference number: 5 (lower is better)
Translates to: AGSAGSADLACCACS*RRSPHSGSQCSCSG
Trigger: ACCGCTGCAGCTACATTGACTTCCTGAATGTGGTGACCTGCGTCAGCTGCAAGCACAACACGCGAGGTCAGCACTGCCAGCACTGCCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp ACCAGGAAGAATTCCCCTTGGTCATCGTCTTCCTGGTGCCCTCTGGGAAGGATATCGGGGCCGGTGGTGTaGTGCTCGCACTCGCACTGC +
Preference number: 5 (lower is better)
Translates to: TRKNSPWSSSSWCPLGRISGPVV*CSHSHC
Trigger: GCAGTGCGAGTGCGAGCACAACACCACCGGCCCCGA...TATCCTTCCCAGAGGGCACCAGGAAGACGATGACCAAGGGGAATTCTTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATCCGGGAGGGACAACTaGGGTGGGATGTGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPSGRDN*GGMWGP
Trigger: GGGGCCCCACATCCCACCCAAGTTGTCCCTCCCGGA...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp AGGAGGAGGTCTTTCTCTCAGCATTTGCCCCTGTCTGGGGAGCCTGAGTGTCCACAGAGCAGCACTGTCTaGCCGAGAGGGAGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RRRSFSQHLPLSGEPECPQSSTV*PRGRVC
Trigger: GCACACCCTCCCTCTCGGCAAGACAGTGCTGCTCTG...TGGACACTCAGGCTCCCCAGACAGGGGCAAATGCTGAGAGAAAGACCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAGAGGCGGTGGCCGAATaGTGGGTTCAGCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: APGLETPSGDGRTAGSSEEAVAE*WVQLHL
Trigger: CAGATGAAGCTGAACCCACAATTCGGCCACCGCCTC...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS TCA 90 bp ATCTACCAGGCGAGGGTGGCCGGGGTGTCCCAGGGACCCGAGCACTaGAGCTTTGCAAACAGCGAGGAACTTGTTGTTTCCAAAAGGCCG +
Preference number: 5 (lower is better)
Translates to: IYQARVAGVSQGPEH*SFANSEELVVSKRP
Trigger: CGGCCTTTTGGAAACAACAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCGGGTCCCTGGGACACCCCGGCCACCCTCGCCTGGTAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 90 bp CCTTCAGGCGCATCACCTTGGGCTGGCAGGCGTAGAACTCCCAGGTaGGGCCCTCATCTGTGGTCACCCAGGATTTGCAGATGTCATAGT +
Preference number: 5 (lower is better)
Translates to: PSGASPWAGRRRTPR*GPHLWSPRICRCHS
Trigger: ACTATGACATCTGCAAATCCTGGGTGACCACAGATGAGGGCCCCACCTGGGAGTTCTACGCCTGCCAGCCCAAGGTGATGCGCCTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS-3UTR CAA 90 bp AGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCCTGCCTCCTGTAAAAACTCCTTGAGGCCCTaGGCGCTCTCCAGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: RRLPGNPPIFWLAPASCKNSLRP*ALSSRV
Trigger: CACGCGGCTGGAGAGCGCCAAGGGCCTCAAGGAGTT...TTTACAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp CCCTTGTGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCAGTGGCCACAGGGCCTTaGGGGTCGGGGTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: PLWLGQPMSEVQNSQSDPVATGP*GSGSFW
Trigger: CCAGAAAGACCCCGACCCCAAAGGCCCTGTGGCCAC...TGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GCGGGGCTCCAGGGACCACGGAGGCAGAAGCACCATTGGGAGATAAGGCCAGTCAGGAGGAAGACGACTTaGGAAGCTGAACTGATCCCT +
Preference number: 5 (lower is better)
Translates to: AGLQGPRRQKHHWEIRPVRRKTT*EAELIP
Trigger: AGGGATCAGTTCAGCTTCCAAAGTCGTCTTCCTCCT...GACTGGCCTTATCTCCCAATGGTGCTTCTGCCTCCGTGGTCCCTGGAGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTGGGTGTGGCAGGCTATaGGAGCACCCCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: DPLTCGTRKITASISRSCGCGRL*EHPSLA
Trigger: AGCCAGGGAGGGGTGCTCCAATAGCCTGCCACACCC...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp ATCAGTGGGGCAGGTCTCCTTGGATCAGAGAGATGGAGGGCCAGGGCACTACCCCCACCACCACTGTTTTaGCTTCTGTCTGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: ISGAGLLGSERWRARALPPPPLF*LLSAHH
Trigger: GTGGTGGGCAGACAGAAGCAAAAACAGTGGTGGTGG...GGGTAGTGCCCTGGCCCTCCATCTCTCTGATCCAAGGAGACCTGCCCCACTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAAGGCAGTCGTCGCACTaGGGGCCCGCCGCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: ARILPESFPLDFCRKGPIRQSSH*GPAAPS
Trigger: CGAGGGCGCGGCGGGCCCCAAGTGCGACGACTGCCT...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACTATGCAGTGTCCCGTaGTGCCTCCCCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGALCSVP*CLPLLF
Trigger: GAAAAGGAGGGGGAGGCACAACGGGACACTGCATAG...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp GATCCCCTCACCTGTGGGACTAGGAAAATAACAGCCTCCATCTCACGGAGCTGTCACGAAAGGGTGATGTaGGCTTCCAGCGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: DPLTCGTRKITASISRSCHERVM*ASSGLG
Trigger: CCCCAGCCCGCTGGAAGCCAACATCACCCTTTCGTG...ACAGCTCCGTGAGATGGAGGCTGTTATTTTCCTAGTCCCACAGGTGAGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp AGGAAGAATGTGAGGGTAGAGATGGGCCAGCTGCAGGAGGATGCAGGGCCTGTCGTCAGCTCCACGGTCTaGTTCCACGAAAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RKNVRVEMGQLQEDAGPVVSSTV*FHERVM
Trigger: CATCACCCTTTCGTGGAACAAGACCGTGGAGCTGAC...GACAGGCCCTGCATCCTCCTGCAGCTGGCCCATCTCTACCCTCACATTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCCAGCCAAACCCCTGTTaGGAGACAGGCACAGCACCC +
Preference number: 5 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAQPNPC*ETGTAP
Trigger: GGGTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTG...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAACAGCTTCATCTGATATaGGACTTGAGGCTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: APGLETPSGDGRTAGSSEQLHLI*DLRLRL
Trigger: CAGCCGGAGCCTCAAGTCCAATATCAGATGAAGCTG...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGCGCATGGAGCACAGGTaGGCGTGCAGGTTGCACTTG +
Preference number: 5 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLRMEHR*ACRLHL
Trigger: CAAGTGCAACCTGCACGCCAACCTGTGCTCCATGCG...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GCCCCAGGGCTGGAGACACCAAGCGGAGATGGGAGAACTGCTGGATCCTCTGAAACGGAGCCTATCTGGTaGCAGTTACACTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: APGLETPSGDGRTAGSSETEPIW*QLHSMQ
Trigger: CTGCATTGAGTGTAACTGCAACCAGATAGGCTCCGT...TTCAGAGGATCCAGCAGTTCTCCCATCTCCGCTTGGTGTCTCCAGCCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp ATGGAGAGTATCTGGCCTCCCAGCCAAACCCCTGTTTGGAGACAGGCACAGCACCCGAGCACTGAAGCTTaGCAAACAGCGAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: MESIWPPSQTPVWRQAQHPSTEA*QTARNL
Trigger: CAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCGG...GTGCTGTGCCTGTCTCCAAACAGGGGTTTGGCTGGGAGGCCAGATACTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GCTCTGCAAATGGATTCCTCTGTGTGTGTGTGTGTGTACATGTGCGTGTGCATGCCCAGGGGGAGGGGTTaGCAAGGTGCCAAAGGAACC +
Preference number: 5 (lower is better)
Translates to: ALQMDSSVCVCVYMCVCMPRGRG*QGAKGT
Trigger: GGTTCCTTTGGCACCTTGCAAACCCCTCCCCCTGGG...CATGCACACGCACATGTACACACACACACACACAGAGGAATCCATTTGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp TCTGCAACTTCCACCCCCGGCTCCACCCTTCACTATCCTGAGGGTGACACTGTTACAGCGAGGAACTTGTaGTTTCCAAAAGGCCGACAC +
Preference number: 5 (lower is better)
Translates to: SATSTPGSTLHYPEGDTVTARNL*FPKGRH
Trigger: GTGTCGGCCTTTTGGAAACAACAAGTTCCTCGCTGT...AACAGTGTCACCCTCAGGATAGTGAAGGGTGGAGCCGGGGGTGGAAGTTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGCTCCCGGCTGGCTCTTaGACATTGGCCAGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGLPAGS*TLASPL
Trigger: GAGAGGACTGGCCAATGTCAAAGAGCCAGCCGGGAG...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp ACCTCCTCCCCTAATGTCCTGCTTCTTGATACAGGGCTGAGGGTGCAGAGCAGCGCTGATCAGAGACATTaGCTTTCTGGGCTAACCCTG +
Preference number: 5 (lower is better)
Translates to: TSSPNVLLLDTGLRVQSSADQRH*LSGLTL
Trigger: CAGGGTTAGCCCAGAAAGCAAATGTCTCTGATCAGC...GCTGCTCTGCACCCTCAGCCCTGTATCAAGAAGCAGGACATTAGGGGAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGGCTAGCCAAATCCTCCAATCTTTaGGCTAGCCCCTGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: EDSWVRRLPGNPPIFWLAKSSNL*ASPCLL
Trigger: CAGGAGGCAGGGGCTAGCCAAAAGATTGGAGGATTT...GGCTAGCCAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp AACCTCGCAGCTGGGAAAGAACAGGTGTGGTGGCAGAAGCCAGTGCTGGGAGCACCTGAGTCATTTCCCTaGGACTTCTGTAGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: NLAAGKEQVWWQKPVLGAPESFP*DFCRKG
Trigger: CCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGG...TGCTCCCAGCACTGGCTTCTGCCACCACACCTGTTCTTTCCCAGCTGCGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATAGCGTGCAGGTTGCACTaGCACCTGCCGATGACCTCG +
Preference number: 5 (lower is better)
Translates to: ARILPESFPLDFCRKGPIACRLH*HLPMTS
Trigger: CGAGGTCATCGGCAGGTGCAAGTGCAACCTGCACGC...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTCCAGCACCCCCAGCCTaGAATACACGTGAATCCCTC +
Preference number: 5 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLPAPPA*NTRESL
Trigger: GAGGGATTCACGTGTATTCAAGGCTGGGGGTGCTGG...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTGTCAGCTCCACGGTCTaGTTCCACGAAAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLVSSTV*FHERVM
Trigger: CATCACCCTTTCGTGGAACAAGACCGTGGAGCTGAC...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp CCCCAAAGAGGATTCCTGGGTCAGGAGGCTTCCCGGAAATCCTCCAATCTTTTGCAAACAGCGAGGAACTaGTTGTTTCCAAAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: PQRGFLGQEASRKSSNLLQTARN*LFPKGR
Trigger: TCGGCCTTTTGGAAACAACAAGTTCCTCGCTGTTTG...CAAAAGATTGGAGGATTTCCGGGAAGCCTCCTGACCCAGGAATCCTCTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTCGCATGGAGCACAGGTaGGCGTGCAGGTTGCACTTG +
Preference number: 5 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPRMEHR*ACRLHL
Trigger: CAAGTGCAACCTGCACGCCAACCTGTGCTCCATGCG...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp CATATCATAAAATCCAGCTGCTTCTTCCTAAGCCTCGATCCCCTCACCTGTGGGGAGGCAGAAGCACCATaGGGAGATAAGGCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: HIIKSSCFFLSLDPLTCGEAEAP*GDKASL
Trigger: AAGACTGGCCTTATCTCCCAATGGTGCTTCTGCCTC...CCCACAGGTGAGGGGATCGAGGCTTAGGAAGAAGCAGCTGGATTTTATGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GGAGGGATGAGAGAGAAAAACCAGAGCCACAAACTTGGACAACTGAGGCTTTGTCCGAGCACTGAAGCTTaGCAAACAGCGAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GGMREKNQSHKLGQLRLCPSTEA*QTARNL
Trigger: CAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCGG...ACAAAGCCTCAGTTGTCCAAGTTTGTGGCTCTGGTTTTTCTCTCTCATCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTAAATTCTTCTTGCACTaGCCGCAGTCGGGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPKFFLH*PQSGPV
Trigger: CACCGGCCCCGACTGCGGCAAGTGCAAGAAGAATTT...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp ACAGCCCAGGAGAACTCACCCTCAGCTACTGCAATGATCGTTTTCATTAATGGGCAGGAAGAATTCCCCTaGGTCATCGTCTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TAQENSPSATAMIVFINGQEEFP*VIVFLV
Trigger: CACCAGGAAGACGATGACCAAGGGGAATTCTTCCTG...CCCATTAATGAAAACGATCATTGCAGTAGCTGAGGGTGAGTTCTCCTGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp TGGCTGGGCCAACCTATGTCTGAAGTCCAGAATTCTCAGAGTGACCCATGTCTTGGACAGATCAGAAAGTaGCTGAGATCTCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: WLGQPMSEVQNSQSDPCLGQIRK*LRSQLS
Trigger: TGAGAGCTGAGATCTCAGCAACTTTCTGATCTGTCC...AAGACATGGGTCACTCTGAGAATTCTGGACTTCAGACATAGGTTGGCCCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS-3UTR CAA 90 bp GCTAGGATTCTCCCTGAGTCATTTCCCTTGGACTTCTGTAGAAAAGGGCCAATACATCTGATATTGGACTaGAGGCTCCGGCTGCAACAG +
Preference number: 5 (lower is better)
Translates to: ARILPESFPLDFCRKGPIHLILD*RLRLQQ
Trigger: CTGTTGCAGCCGGAGCCTCAAGTCCAATATCAGATG...TATTGGCCCTTTTCTACAGAAGTCCAAGGGAAATGACTCAGGGAGAATCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTGGTCTTAGCTTAGCTTaGGGGACTCAAGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPGLSLA*GTQGKD
Trigger: GTCCTTCCCTTGAGTCCCCAAAGCTAAGCTAAGACC...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS-3UTR CAA 90 bp AAATCAGAGCATTGGATTCAACCTCTGCTAGGATTCTCCCTGAGTCATTTCCCTGGACAGATCAGAAAGTaGCCCATAACTTCACGTCCT +
Preference number: 5 (lower is better)
Translates to: KSEHWIQPLLGFSLSHFPGQIRK*PITSRP
Trigger: AGGACGTGAAGTTATGGGCAACTTTCTGATCTGTCC...AGGGAAATGACTCAGGGAGAATCCTAGCAGAGGTTGAATCCAATGCTCTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 72 bp CGGACACGGGCACGGGCGCGCGGTCAGGGCTACGTGTaGGCGCCGTCTTCTCGGACCCCCACTCTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: RTRARARGQGYV*APSSRTPTLPA
Trigger: GGCCGGGAGAGTGGGGGTCCGAGAAGACGGCGCCCACACGTAGCCCTGACCGCGCGCCCGTGCCCGTGTCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS CCA 72 bp GGCGCCAGTAGTGCGTGGGGAGGCAGTCGTCGCACTTaGGGCCCGCCGCGCCCTCGCGGCACTCGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: GASSAWGGSRRT*GPPRPRGTRRS
Trigger: GCTTCTGCGAGTGCCGCGAGGGCGCGGCGGGCCCCAAGTGCGACGACTGCCTCCCCACGCACTACTGGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393229.4
ENST00000490694.1
CDS GCA 72 bp GCCCAGCGCGAGTACTCCTCGGTGCAGAGCACGCGGTaGGCGCTGGAGGATGACATGTCGCGGGCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: AQREYSSVQSTR*ALEDDMSRARR
Trigger: CCGCCGGGCCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp CTGCGCAGTCTGCAGAGGCGCGGCCCAGAGAAGCCCTaGAGAGGCAGCGACGGGGTCAGGCGGGACTCGCGG +
Preference number: 6 (lower is better)
Translates to: LRSLQRRGPEKP*RGSDGVRRDSR
Trigger: CCGCGAGTCCCGCCTGACCCCGTCGCTGCCTCTCCAGGGCTTCTCTGGGCCGCGCCTCTGCAGACTGCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp GCGAGTACTCCTCGGTGCAGAGCACGCGGTGCGCGCTaGAGGATGACATGTCGCGGGCCCGGCGGGCGGACA +
Preference number: 6 (lower is better)
Translates to: ASTPRCRARGAR*RMTCRGPGGRT
Trigger: TGTCCGCCCGCCGGGCCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp ACACGTTGGGGTAGCAGCCCTGGCGCCAGTAGTGCGTaGGGAGGCAGTCGTCGCACTTGGGGCCCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: TRWGSSPGASSA*GGSRRTWGPPR
Trigger: GCGCGGCGGGCCCCAAGTGCGACGACTGCCTCCCCACGCACTACTGGCGCCAGGGCTGCTACCCCAACGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393229.4
ENST00000490694.1
CDS TCA 72 bp CTCCTCGGTGCAGAGCACGCGGTGCGCGCTGGAGGATaGCATGTCGCGGGCCCGGCGGGCGGACATACCGAA +
Preference number: 6 (lower is better)
Translates to: LLGAEHAVRAGG*HVAGPAGGHTE
Trigger: TTCGGTATGTCCGCCCGCCGGGCCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp CGCGGGCCCGGCGGGCGGACATACCGAAGGCCTCCATaGAGTCCTCGGCGTAGAACTGGTAGGGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RGPGGRTYRRPP*SPRRRTGRAAR
Trigger: CCTGGCAGCCCTACCAGTTCTACGCCGAGGACTGCATGGAGGCCTTCGGTATGTCCGCCCGCCGGGCCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp CGGGGTCAGGCGGGACTCGCGGCCTCAGCATGGAAATaGCACATCTACCAGGCGAGGGTGGCCGGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: RGQAGLAASAWK*HIYQARVAGVS
Trigger: GGACACCCCGGCCACCCTCGCCTGGTAGATGTGGCATTTCCATGCTGAGGCCGCGAGTCCCGCCTGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp GCCAGAGGGAGGCAGTGCAGGAAGAGCGCCAGCAGATaGAGCATGGCTGCGCAGTCTGCAGAGGCGCGGCCC +
Preference number: 6 (lower is better)
Translates to: ARGRQCRKSASR*SMAAQSAEARP
Trigger: GGGCCGCGCCTCTGCAGACTGCGCAGCCATGCTGCATCTGCTGGCGCTCTTCCTGCACTGCCTCCCTCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp CAGCGACGGGGTCAGGCGGGACTCGCGGCCTCAGCATaGAAATGCCACATCTACCAGGCGAGGGTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: QRRGQAGLAASA*KCHIYQARVAG
Trigger: CCCGGCCACCCTCGCCTGGTAGATGTGGCATTTCCATGCTGAGGCCGCGAGTCCCGCCTGACCCCGTCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 72 bp GCCGCGCCCTCGCGGCACTCGCAGAAGCCGGTCTCGTaGCACCGGTCGTGCACGGAGCCTATCTGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: AAPSRHSQKPVS*HRSCTEPIWLQ
Trigger: CTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393229.4
ENST00000490694.1
CDS TCA 72 bp AGTAGGTGGCCAGGCCCTCCTCCTCCTTGTCGAACATaGGCCTGGGCGGGTGGGCCAGGTCCGGGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: SRWPGPPPPCRT*AWAGGPGPGWR
Trigger: CCTCCAACCCGGACCTGGCCCACCCGCCCAGGCTCATGTTCGACAAGGAGGAGGAGGGCCTGGCCACCTACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp GGCCGGTGGTGTTGTGCTCGCACTCGCACTGCAGGCTaGCCTCGCGCATGGAGCACAGGTTGGCGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: GRWCCARTRTAG*PRAWSTGWRAG
Trigger: ACCTGCACGCCAACCTGTGCTCCATGCGCGAGGGCAGCCTGCAGTGCGAGTGCGAGCACAACACCACCGGCC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp CCGCGCCCTCGCGGCACTCGCAGAAGCCGGTCTCGTTaGACCGGTCGTGCACGGAGCCTATCTGGTTGCAGT +
Preference number: 6 (lower is better)
Translates to: PRPRGTRRSRSR*TGRARSLSGCS
Trigger: ACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393229.4
ENST00000490694.1
CDS CAA 90 bp ATGGCGAAGCGGTCCCGCACCTCGAAGCGCACGTGCTTCTCCTTCTaGGAGCCTGCCCAGCGCGAGTACTCCTCGGTGCAGAGCACGCGG +
Preference number: 6 (lower is better)
Translates to: MAKRSRTSKRTCFSF*EPAQREYSSVQSTR
Trigger: CCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACCGCTTCGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 90 bp TTGGGGCCCGCCGCGCCCTCGCGGCACTCGCAGAAGCCGGTCTCGTaGCACCGGTCGTGCACGGAGCCTATCTGGTTGCAGTTACACTCA +
Preference number: 6 (lower is better)
Translates to: LGPAAPSRHSQKPVS*HRSCTEPIWLQLHS
Trigger: TGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGGCGGGCCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CAA 90 bp TTGGGGCCCGCCGCGCCCTCGCGGCACTCGCAGAAGCCGGTCTCGTaGCACCGGTCGTGCACGGAGCCTATCTGGTTGCAGTTACACTCT +
Preference number: 6 (lower is better)
Translates to: LGPAAPSRHSQKPVS*HRSCTEPIWLQLHS
Trigger: AGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGGCGGGCCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS TCA 72 bp TGTTGGCTTCCAGCGGGCTGGGGTAGCGGCTCCAGGTaGTGCTCTGCCAGTAGGTGGCCAGGCCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: CWLPAGWGSGSR*CSASRWPGPPP
Trigger: AGGAGGAGGGCCTGGCCACCTACTGGCAGAGCATCACCTGGAGCCGCTACCCCAGCCCGCTGGAAGCCAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp GAAGAGCGCCAGCAGATGCAGCATGGCTGCGCAGTCTaGAGAGGCGCGGCCCAGAGAAGCCCTGGAGAGGCA +
Preference number: 6 (lower is better)
Translates to: EERQQMQHGCAV*RGAAQRSPGEA
Trigger: TGCCTCTCCAGGGCTTCTCTGGGCCGCGCCTCTGCAGACTGCGCAGCCATGCTGCATCTGCTGGCGCTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp TTCTTGCACTTGCCGCAGTCGGGGCCGGTGGTGTTGTaGTCGCACTCGCACTGCAGGCTGCCCTCGCGCATG +
Preference number: 6 (lower is better)
Translates to: FLHLPQSGPVVL*SHSHCRLPSRM
Trigger: CATGCGCGAGGGCAGCCTGCAGTGCGAGTGCGAGCACAACACCACCGGCCCCGACTGCGGCAAGTGCAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp AGCCGGCCCGCCAGGACCGGGTGCGGAAATTCTTCTTaGACTTGCCGCAGTCGGGGCCGGTGGTGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: SRPARTGCGNSS*TCRSRGRWCCA
Trigger: AGCACAACACCACCGGCCCCGACTGCGGCAAGTGCAAGAAGAATTTCCGCACCCGGTCCTGGCGGGCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp GGAGGCAGTGCAGGAAGAGCGCCAGCAGATGCAGCATaGCTGCGCAGTCTGCAGAGGCGCGGCCCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: GGSAGRAPADAA*LRSLQRRGPEK
Trigger: CTTCTCTGGGCCGCGCCTCTGCAGACTGCGCAGCCATGCTGCATCTGCTGGCGCTCTTCCTGCACTGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp GGTTGTCCATGTTGCGCAGGTCGGGGCCGGCAAAGATaGCGAAGCGGTCCCGCACCTCGAAGCGCACGTGCT +
Preference number: 6 (lower is better)
Translates to: GCPCCAGRGRQR*RSGPAPRSARA
Trigger: AGCACGTGCGCTTCGAGGTGCGGGACCGCTTCGCCATCTTTGCCGGCCCCGACCTGCGCAACATGGACAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp TGCAGACCAGCGTCCCTGCAGGGTCCAGCTTCTTTCTaGCGCCCTCTCGGCTCACTGGCTTCCCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: CRPASLQGPASF*RPLGSLASQPG
Trigger: CCCTGGCTGGGAAGCCAGTGAGCCGAGAGGGCGCCAGAAAGAAGCTGGACCCTGCAGGGACGCTGGTCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS CAA 72 bp CGGTCCCGCACCTCGAAGCGCACGTGCTTCTCCTTCTaGGAGCCTGCCCAGCGCGAGTACTCCTCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: RSRTSKRTCFSF*EPAQREYSSVQ
Trigger: CTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 90 bp CAGAAGCCGGTCTCGTTGCACCGGTCGTGCACGGAGCCTATCTGGTaGCAGTTACACTCTGGACGGACACGGGCACGGGCGCGCGGTCAG +
Preference number: 6 (lower is better)
Translates to: QKPVSLHRSCTEPIW*QLHSGRTRARARGQ
Trigger: CTGACCGCGCGCCCGTGCCCGTGTCCGTCCAGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS GCA 72 bp CCTTCTTGGAGCCTGCCCAGCGCGAGTACTCCTCGGTaGAGAGCACGCGGTGCGCGCTGGAGGATGACATGT +
Preference number: 6 (lower is better)
Translates to: PSWSLPSASTPR*RARGARWRMTC
Trigger: ACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp CACCTCGAAGCGCACGTGCTTCTCCTTCTTGGAGCCTaGCCAGCGCGAGTACTCCTCGGTGCAGAGCACGCG +
Preference number: 6 (lower is better)
Translates to: HLEAHVLLLLGA*PARVLLGAEHA
Trigger: CGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp AGAAGTACTTGTAGAGGTTCTCCCGCTGCACATAGGTaGCGCCCAGCGCCGGGCGCAGCAGCCGCATGCGCA +
Preference number: 6 (lower is better)
Translates to: RSTCRGSPAAHR*RPAPGAAAACA
Trigger: TGCGCATGCGGCTGCTGCGCCCGGCGCTGGGCGGCACCTATGTGCAGCGGGAGAACCTCTACAAGTACTTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp GGTCCCGCACCTCGAAGCGCACGTGCTTCTCCTTCTTaGAGCCTGCCCAGCGCGAGTACTCCTCGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: GPAPRSARASPS*SLPSASTPRCR
Trigger: TCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp TGTGCTCGCACTCGCACTGCAGGCTGCCCTCGCGCATaGAGCACAGGTTGGCGTGCAGGTTGCACTTGCACC +
Preference number: 6 (lower is better)
Translates to: CARTRTAGCPRA*STGWRAGCTCT
Trigger: GGTGCAAGTGCAACCTGCACGCCAACCTGTGCTCCATGCGCGAGGGCAGCCTGCAGTGCGAGTGCGAGCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp ATTGGCCAGTCCTCTCCTGCTGCCTCGCAGAGCAGATaGCGACCTCCCAGGGGGAGGGGTTTGCAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: IGQSSPAASQSR*RPPRGRGLQGA
Trigger: GGCACCTTGCAAACCCCTCCCCCTGGGAGGTCGCCATCTGCTCTGCGAGGCAGCAGGAGAGGACTGGCCAAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS CCA 72 bp GTCGTGCACGGAGCCTATCTGGTTGCAGTTACACTCTaGACGGACACGGGCACGGGCGCGCGGTCAGGGCTA +
Preference number: 6 (lower is better)
Translates to: VVHGAYLVAVTL*TDTGTGARSGL
Trigger: TAGCCCTGACCGCGCGCCCGTGCCCGTGTCCGTCCAGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS TCA 72 bp CGTCGGTCAGCTCCACGGTCTTGTTCCACGAAAGGGTaGTGTTGGCTTCCAGCGGGCTGGGGTAGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: RRSAPRSCSTKG*CWLPAGWGSGS
Trigger: GGAGCCGCTACCCCAGCCCGCTGGAAGCCAACATCACCCTTTCGTGGAACAAGACCGTGGAGCTGACCGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS TCA 72 bp AGGTGCGCCCGTTGTCCAGGGACTTCTCCAGGACCATaGCCGTGGGCCGGCCGTACTCGAAGGTCATCACCA +
Preference number: 6 (lower is better)
Translates to: RCARCPGTSPGP*PWAGRTRRSSP
Trigger: TGGTGATGACCTTCGAGTACGGCCGGCCCACGGTCATGGTCCTGGAGAAGTCCCTGGACAACGGGCGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp AAGATGGCGAAGCGGTCCCGCACCTCGAAGCGCACGTaGTTCTCCTTCTTGGAGCCTGCCCAGCGCGAGTAC +
Preference number: 6 (lower is better)
Translates to: KMAKRSRTSKRT*FSFLEPAQREY
Trigger: GTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACCGCTTCGCCATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp TGCAGGCTGCCCTCGCGCATGGAGCACAGGTTGGCGTaGAGGTTGCACTTGCACCTGCCGATGACCTCGATG +
Preference number: 6 (lower is better)
Translates to: CRLPSRMEHRLA*RLHLHLPMTSM
Trigger: CATCGAGGTCATCGGCAGGTGCAAGTGCAACCTGCACGCCAACCTGTGCTCCATGCGCGAGGGCAGCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp CAGATGGCGACCTCCCAGGGGGAGGGGTTTGCAAGGTaGCAAAGGAACCTGCAGTGGCACAGGCGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: QMATSQGEGFAR*QRNLQWHRRWE
Trigger: CTCCCAACGCCTGTGCCACTGCAGGTTCCTTTGGCACCTTGCAAACCCCTCCCCCTGGGAGGTCGCCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS CCA 72 bp CCTCAGCATGGAAATGCCACATCTACCAGGCGAGGGTaGCCGGGGTGTCCCAGGGACCCGAGCACTGAAGCT +
Preference number: 6 (lower is better)
Translates to: PQHGNATSTRRG*PGCPRDPSTEA
Trigger: AGCTTCAGTGCTCGGGTCCCTGGGACACCCCGGCCACCCTCGCCTGGTAGATGTGGCATTTCCATGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp CCGGTCTCGTTGCACCGGTCGTGCACGGAGCCTATCTaGTTGCAGTTACACTCTGGACGGACACGGGCACGG +
Preference number: 6 (lower is better)
Translates to: PVSLHRSCTEPI*LQLHSGRTRAR
Trigger: CCGTGCCCGTGTCCGTCCAGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS CAA 72 bp GTCTCGTTGCACCGGTCGTGCACGGAGCCTATCTGGTaGCAGTTACACTCTGGACGGACACGGGCACGGGCG +
Preference number: 6 (lower is better)
Translates to: VSLHRSCTEPIW*QLHSGRTRARA
Trigger: CGCCCGTGCCCGTGTCCGTCCAGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS CAA 90 bp TGCTCGCACTCGCACTGCAGGCTGCCCTCGCGCATGGAGCACAGGTaGGCGTGCAGGTTGCACTTGCACCTGCCGATGACCTCGATGTTG +
Preference number: 6 (lower is better)
Translates to: CSHSHCRLPSRMEHR*ACRLHLHLPMTSML
Trigger: CAACATCGAGGTCATCGGCAGGTGCAAGTGCAACCTGCACGCCAACCTGTGCTCCATGCGCGAGGGCAGCCTGCAGTGCGAGTGCGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 90 bp TTCCCAGGGTGGCCAGGCCTGGAGAGAAGACTCTGGCTTCCTTCCTaGGGATCAAACACGTCCCAGCCCCACCTTCCCCGCCCTGGCACT +
Preference number: 6 (lower is better)
Translates to: FPGWPGLERRLWLPS*GSNTSQPHLPRPGT
Trigger: AGTGCCAGGGCGGGGAAGGTGGGGCTGGGACGTGTTTGATCCCAAGGAAGGAAGCCAGAGTCTTCTCTCCAGGCCTGGCCACCCTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS GCA 72 bp CCCAGGTGGGGCCCTCATCTGTGGTCACCCAGGATTTaGAGATGTCATAGTCCCCAGAGGCCAGAGGGAGGC +
Preference number: 6 (lower is better)
Translates to: PRWGPHLWSPRI*RCHSPQRPEGG
Trigger: GCCTCCCTCTGGCCTCTGGGGACTATGACATCTGCAAATCCTGGGTGACCACAGATGAGGGCCCCACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp GAAGCAACTTACGACGGCTGTGCAGACCAGCGTCCCTaGAGGGTCCAGCTTCTTTCTGGCGCCCTCTCGGCT +
Preference number: 6 (lower is better)
Translates to: EATYDGCADQRP*RVQLLSGALSA
Trigger: AGCCGAGAGGGCGCCAGAAAGAAGCTGGACCCTGCAGGGACGCTGGTCTGCACAGCCGTCGTAAGTTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS CAA 72 bp TGGCCAGGCCTGGAGAGAAGACTCTGGCTTCCTTCCTaGGGATCAAACACGTCCCAGCCCCACCTTCCCCGC +
Preference number: 6 (lower is better)
Translates to: WPGLERRLWLPS*GSNTSQPHLPR
Trigger: GCGGGGAAGGTGGGGCTGGGACGTGTTTGATCCCAAGGAAGGAAGCCAGAGTCTTCTCTCCAGGCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490694.1
CDS TCA 72 bp CTGGTGGAGGGTGACGGTGCACCCCAGAAGCATCTCTaGGATTTGGGGTCTGCTCCCGGCTGGCTCTTTGAC +
Preference number: 6 (lower is better)
Translates to: LVEGDGAPQKHL*DLGSAPGWLFD
Trigger: GTCAAAGAGCCAGCCGGGAGCAGACCCCAAATCTCAGAGATGCTTCTGGGGTGCACCGTCACCCTCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS GCA 72 bp GGTGGGCCAGGTCCGGGTTGGAGGCGTCACACTCGTTaGTGCATAGGTAGGGATTCTCATGGGAGCAGAACC +
Preference number: 6 (lower is better)
Translates to: GGPGPGWRRHTR*CIGRDSHGSRT
Trigger: GGTTCTGCTCCCATGAGAATCCCTACCTATGCAGCAACGAGTGTGACGCCTCCAACCCGGACCTGGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp GGAGTGACCGTAGCATTCGCAGTTGCCAAAGGAACCTaGAGTGGCACAGGCGTTGGGAGAGCCATGGGGCAG +
Preference number: 6 (lower is better)
Translates to: GVTVAFAVAKGT*SGTGVGRAMGQ
Trigger: CTGCCCCATGGCTCTCCCAACGCCTGTGCCACTGCAGGTTCCTTTGGCAACTGCGAATGCTACGGTCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 72 bp GCATCACCTTGGGCTGGCAGGCGTAGAACTCCCAGGTaGGGCCCTCATCTGTGGTCACCCAGGATTTGCAGA +
Preference number: 6 (lower is better)
Translates to: ASPWAGRRRTPR*GPHLWSPRICR
Trigger: TCTGCAAATCCTGGGTGACCACAGATGAGGGCCCCACCTGGGAGTTCTACGCCTGCCAGCCCAAGGTGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 90 bp AGCATCTCTGAGATTTGGGGTCTGCTCCCGGCTGGCTCTTTGACATaGGCCAGTCCTCTCCTGCTGCCTCGCAGAGCAGATGGCGACCTC +
Preference number: 6 (lower is better)
Translates to: SISEIWGLLPAGSLT*ASPLLLPRRADGDL
Trigger: GAGGTCGCCATCTGCTCTGCGAGGCAGCAGGAGAGGACTGGCCAATGTCAAAGAGCCAGCCGGGAGCAGACCCCAAATCTCAGAGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS TCA 72 bp TCTCTGAGATTTGGGGTCTGCTCCCGGCTGGCTCTTTaGCATTGGCCAGTCCTCTCCTGCTGCCTCGCAGAG +
Preference number: 6 (lower is better)
Translates to: SLRFGVCSRLAL*HWPVLSCCLAE
Trigger: CTCTGCGAGGCAGCAGGAGAGGACTGGCCAATGTCAAAGAGCCAGCCGGGAGCAGACCCCAAATCTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS GCA 72 bp GGGCCAGGTCCGGGTTGGAGGCGTCACACTCGTTGCTaGATAGGTAGGGATTCTCATGGGAGCAGAACCTCT +
Preference number: 6 (lower is better)
Translates to: GPGPGWRRHTRC*IGRDSHGSRTS
Trigger: AGAGGTTCTGCTCCCATGAGAATCCCTACCTATGCAGCAACGAGTGTGACGCCTCCAACCCGGACCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS GCA 72 bp AGCTGCAGCGGTTGGAGTGACCGTAGCATTCGCAGTTaGCAAAGGAACCTGCAGTGGCACAGGCGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: SCSGWSDRSIRS*QRNLQWHRRWE
Trigger: CTCCCAACGCCTGTGCCACTGCAGGTTCCTTTGGCAACTGCGAATGCTACGGTCACTCCAACCGCTGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS GCA 72 bp CGGCACTCGCAGAAGCCGGTCTCGTTGCACCGGTCGTaGACGGAGCCTATCTGGTTGCAGTTACACTCAATG +
Preference number: 6 (lower is better)
Translates to: RHSQKPVSLHRS*TEPIWLQLHSM
Trigger: CATTGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGGCTTCTGCGAGTGCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 72 bp GGCAGGCGTAGAACTCCCAGGTGGGGCCCTCATCTGTaGTCACCCAGGATTTGCAGATGTCATAGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GRRRTPRWGPHL*SPRICRCHSPQ
Trigger: CTGGGGACTATGACATCTGCAAATCCTGGGTGACCACAGATGAGGGCCCCACCTGGGAGTTCTACGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CCA 72 bp AGGGTGACGGTGCACCCCAGAAGCATCTCTGAGATTTaGGGTCTGCTCCCGGCTGGCTCTTTGACATTGGCC +
Preference number: 6 (lower is better)
Translates to: RVTVHPRSISEI*GLLPAGSLTLA
Trigger: GGCCAATGTCAAAGAGCCAGCCGGGAGCAGACCCCAAATCTCAGAGATGCTTCTGGGGTGCACCGTCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS CAA 72 bp GAGATTTGGGGTCTGCTCCCGGCTGGCTCTTTGACATaGGCCAGTCCTCTCCTGCTGCCTCGCAGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: EIWGLLPAGSLT*ASPLLLPRRAD
Trigger: ATCTGCTCTGCGAGGCAGCAGGAGAGGACTGGCCAATGTCAAAGAGCCAGCCGGGAGCAGACCCCAAATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS TCA 72 bp GCTGGCAGTGCTGACCTCGCGTGTTGTGCTTGCAGCTaGCGCAGGTCACCACATTCAGGAAGTCAATGTAGC +
Preference number: 6 (lower is better)
Translates to: AGSADLACCACS*RRSPHSGSQCS
Trigger: GCTACATTGACTTCCTGAATGTGGTGACCTGCGTCAGCTGCAAGCACAACACGCGAGGTCAGCACTGCCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 72 bp CCGGTCTCGTTGCACCGGTCGTGCACGGAGCCTATCTaGTTGCAGTTACACTCAATGCAGACGTTCTCATCA +
Preference number: 6 (lower is better)
Translates to: PVSLHRSCTEPI*LQLHSMQTFSS
Trigger: TGATGAGAACGTCTGCATTGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGACCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CAA 72 bp GTCTCGTTGCACCGGTCGTGCACGGAGCCTATCTGGTaGCAGTTACACTCAATGCAGACGTTCTCATCATCC +
Preference number: 6 (lower is better)
Translates to: VSLHRSCTEPIW*QLHSMQTFSSS
Trigger: GGATGATGAGAACGTCTGCATTGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGGTGCAACGAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CAA 90 bp CCCAGGGACCCGAGCACTGAAGCTTTGCAAACAGCGAGGAACTTGTaGTTTCCAAAAGGCCGACACGGAAAATTCAGAGCCAGCGTTTCT +
Preference number: 6 (lower is better)
Translates to: PRDPSTEALQTARNL*FPKGRHGKFRASVS
Trigger: AGAAACGCTGGCTCTGAATTTTCCGTGTCGGCCTTTTGGAAACAACAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCGGGTCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 90 bp TGTCCCAGGGACCCGAGCACTGAAGCTTTGCAAACAGCGAGGAACTaGTTGTTTCCAAAAGGCCGACACGGAAAATTCAGAGCCAGCGTT +
Preference number: 6 (lower is better)
Translates to: CPRDPSTEALQTARN*LFPKGRHGKFRASV
Trigger: AACGCTGGCTCTGAATTTTCCGTGTCGGCCTTTTGGAAACAACAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCGGGTCCCTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 90 bp TTCAGAGCCAGCGTTTCTCAGACTGCTGATGGACAGATCAGAAAGTaGCCCATAACTTCACGTCCTCCTAACCCTGGTATCACACCTCCC +
Preference number: 6 (lower is better)
Translates to: FRASVSQTADGQIRK*PITSRPPNPGITPP
Trigger: GGGAGGTGTGATACCAGGGTTAGGAGGACGTGAAGTTATGGGCAACTTTCTGATCTGTCCATCAGCAGTCTGAGAAACGCTGGCTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CAA 72 bp CCGAGCACTGAAGCTTTGCAAACAGCGAGGAACTTGTaGTTTCCAAAAGGCCGACACGGAAAATTCAGAGCC +
Preference number: 6 (lower is better)
Translates to: PSTEALQTARNL*FPKGRHGKFRA
Trigger: GGCTCTGAATTTTCCGTGTCGGCCTTTTGGAAACAACAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 72 bp GACCCGAGCACTGAAGCTTTGCAAACAGCGAGGAACTaGTTGTTTCCAAAAGGCCGACACGGAAAATTCAGA +
Preference number: 6 (lower is better)
Translates to: DPSTEALQTARN*LFPKGRHGKFR
Trigger: TCTGAATTTTCCGTGTCGGCCTTTTGGAAACAACAAGTTCCTCGCTGTTTGCAAAGCTTCAGTGCTCGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372179.7
ENST00000393229.4
CDS CAA 72 bp AGCGTTTCTCAGACTGCTGATGGACAGATCAGAAAGTaGCCCATAACTTCACGTCCTCCTAACCCTGGTATC +
Preference number: 6 (lower is better)
Translates to: SVSQTADGQIRK*PITSRPPNPGI
Trigger: GATACCAGGGTTAGGAGGACGTGAAGTTATGGGCAACTTTCTGATCTGTCCATCAGCAGTCTGAGAAACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS TCA 72 bp ACACGGAAAATTCAGAGCCAGCGTTTCTCAGACTGCTaGTGGACAGATCAGAAAGTTGCTGAGATCTCAGCT +
Preference number: 6 (lower is better)
Translates to: TRKIQSQRFSDC*WTDQKVAEISA
Trigger: AGCTGAGATCTCAGCAACTTTCTGATCTGTCCATCAGCAGTCTGAGAAACGCTGGCTCTGAATTTTCCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372179.7
CDS TCA 72 bp ACACGGAAAATTCAGAGCCAGCGTTTCTCAGACTGCTaGTGGACAGATCAGAAAGTTGCCCATAACTTCACG +
Preference number: 6 (lower is better)
Translates to: TRKIQSQRFSDC*WTDQKVAHNFT
Trigger: CGTGAAGTTATGGGCAACTTTCTGATCTGTCCATCAGCAGTCTGAGAAACGCTGGCTCTGAATTTTCCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4
CDS CCA 72 bp ATCAAATCAGGCAGATTCTCAAATTGTGACAGTGGATaGAAATGGGATAAGGAGAAAATCCGCAGGGATCCT +
Preference number: 6 (lower is better)
Translates to: IKSGRFSNCDSG*KWDKEKIRRDP
Trigger: AGGATCCCTGCGGATTTTCTCCTTATCCCATTTCCATCCACTGTCACAATTTGAGAATCTGCCTGATTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393229.4