Pregenerated sensors for NTF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000185652Ensembl transcript IDs: ENST00000331010.7, ENST00000423158.4, ENST00000535299.5, ENST00000541234.1, ENST00000543548.1, ENST00000544836.5
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAACAGATGGGAGAGGCCTaGGGGAAGGCAAGCACACTG | + |
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Preference number: 2 (lower is better) Translates to: NTGVHRFYRVTPESRITKQMGEA*GKASTL Trigger: CAGTGTGCTTGCCTTCCCTCAGGCCTCTCCCATCTG...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| 3UTR-3UTR TCA 90 bp | ACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACAGAGTGACTCCTaGGAGCCGGATCACAAAACA | + |
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Preference number: 2 (lower is better) Translates to: TTVMALTILNAKYWCTQILQSDS*EPDHKT Trigger: TGTTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAA...AATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACAACAAGTTTTAACAGATaGGAGAGGCCTGAGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SHGLDNTECKILVYTDFTTSFNR*ERPEGR Trigger: CCTTCCCTCAGGCCTCTCCCATCTGTTAAAACTTGT...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAACACCGGCTGGAATGCTaGCTTGGCGGGCCCTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: NTGVHRFYRVTPESRITKHRLEC*LGGPSP Trigger: CGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTG...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | AACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATGCTGGAATGCTGACTTaGCGGGCCCTCCCCGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: NNSHGLDNTECKILVYTDAGMLT*RALPAP Trigger: CGGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGC...ATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | ATGCAAAATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACCATGGCATCCGTGTaGCCGTTTCCAGGGACGTCG | + |
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Preference number: 4 (lower is better) Translates to: MQNTGVHRFYRVTPESRITMASV*PFPGTS Trigger: CGACGTCCCTGGAAACGGCCACACGGATGCCATGGT...GATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATTTTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | ATGCAAAATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCCCACGTAATCCTCCATaGGATACAAGGGCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MQNTGVHRFYRVTPESRIPRNPP*DTRAGA Trigger: AGCCCCCGCCCTTGTATCTCATGGAGGATTACGTGG...GATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATTTTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | ATGCAAAATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCGAGTACTCCCCTCGGTaGCTCTTATGCTCCGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MQNTGVHRFYRVTPESRIEYSPR*LLCSAY Trigger: GTACGCGGAGCATAAGAGTCACCGAGGGGAGTACTC...GATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATTTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR GCA 90 bp | ACTAAAACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACAGGGGCTCCAAGGGGGTaGTGTCGCTCAGCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: TKTTVMALTILNAKYWCTGAPRG*CRSAGP Trigger: GGGTCCTGCTGAGCGACAGCACCCCCTTGGAGCCCC...TGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTTTTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR GCA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAAAGAGAAGAAAGTAGTTaGGCCGGGCTGCGTCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTGVHRFYRVTPESRITKREESS*AGLRRG Trigger: CCCGCGACGCAGCCCGGCGCAACTACTTTCTTCTCT...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | ACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTCTCCCCCAGCACCGTaGCCTGGTGTCCCCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TTVMALTILNAKYWCTQISPPAP*PGVPEC Trigger: ACATTCGGGGACACCAGGTCACGGTGCTGGGGGAGA...AATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAAAATGTCGATGGCCGATaGCTTGTCGGTCACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGVHRFYRVTPESRITKNVDGR*LVGHPQ Trigger: CTGTGGGTGACCGACAAGTCATCGGCCATCGACATT...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR GCA 90 bp | ATGCAAAATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCCAGTTCGGTGTCCATTaGAATCACCGGCTGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: MQNTGVHRFYRVTPESRIQFGVH*NHRLEC Trigger: GCATTCCAGCCGGTGATTGCAATGGACACCGAACTG...GATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATTTTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAAATTGCAATCACCGGCTaGAATGCTGACTTGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTGVHRFYRVTPESRITKIAITG*NADLAG Trigger: GCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAAT...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAAGTCCCCGAATGTCGATaGCCGATGACTTGTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTGVHRFYRVTPESRITKVPECR*PMTCRS Trigger: TGACCGACAAGTCATCGGCCATCGACATTCGGGGAC...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | ACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTCCCAGCACCGTGACCTaGTGTCCCCGAATGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTVMALTILNAKYWCTQIPSTVT*CPRMSM Trigger: CATCGACATTCGGGGACACCAGGTCACGGTGCTGGG...AATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACACAGCAGGACCCGCGGTaGGTTGTAGCGTCTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHGLDNTECKILVYTDFTQQDPR*VVASLL Trigger: CAACAGAGACGCTACAACTCACCGCGGGTCCTGCTG...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | AACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATGTACCGTTTCCGCCGTaGTGTTCTGTTCGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNSHGLDNTECKILVYTDVPFPP*CSVRHH Trigger: GTGGTGGCGAACAGAACATCACGGCGGAAACGGTAC...ATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | ACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTCCAGGGACGTCGACATaGAGAGAAAGGTGGACGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TTVMALTILNAKYWCTQIPGTST*RERWTR Trigger: TCGCGTCCACCTTTCTCTTCATGTCGACGTCCCTGG...AATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACACAGATGGGAGAGGCCTaGGGGAAGGCAAGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SHGLDNTECKILVYTDFTQMGEA*GKASTL Trigger: CAGTGTGCTTGCCTTCCCTCAGGCCTCTCCCATCTG...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | AACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATGGGGAGCCTCAGCTTTaGGCAGGGTGCTCTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNSHGLDNTECKILVYTDGEPQL*AGCSGN Trigger: ATTACCAGAGCACCCTGCCCAAAGCTGAGGCTCCCC...ATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACACCCTGCAACCGTTTTTaGCCGGCCTGGCTTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SHGLDNTECKILVYTDFTPCNRF*PAWLPY Trigger: GTAAGGAAGCCAGGCCGGTCAAAAACGGTTGCAGGG...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | ATGCAAAATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAGTTTTAACAGATaGGAGAGGCCTGAGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: MQNTGVHRFYRVTPESRITSFNR*ERPEGR Trigger: CCTTCCCTCAGGCCTCTCCCATCTGTTAAAACTTGT...GATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATTTTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | ATGCAAAATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCATTGAGCGAGTCTTCTaGCAAACTCCTTTGATCCAT | + |
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Preference number: 4 (lower is better) Translates to: MQNTGVHRFYRVTPESRIIERVF*QTPLIH Trigger: ATGGATCAAAGGAGTTTGCCAGAAGACTCGCTCAAT...GATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATTTTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | AACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATGAGTTTATTGTTCTCTaGAGTCAGTGCTCGGACGTA | + |
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Preference number: 4 (lower is better) Translates to: NNSHGLDNTECKILVYTDEFIVL*SQCSDV Trigger: TACGTCCGAGCACTGACTTCAGAGAACAATAAACTC...ATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | ACTAAAACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACAACAGATTTTACAGAGTaGCTCCTGAGAGCCGGATCA | + |
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Preference number: 4 (lower is better) Translates to: TKTTVMALTILNAKYWCTTDFTE*LLRAGS Trigger: TGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGT...TGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTTTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR GCA 90 bp | AACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTGTTGTTACCTTGGATaGCACGGAGATAAGCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: NNSHGLDNTECKILVYTDCCYLG*HGDKRE Trigger: TTCTCGCTTATCTCCGTGGCATCCAAGGTAACAACA...ATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | ACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTGGGATGTTTTGCACTaGGAGTTCCAGTGTTTATCA | + |
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Preference number: 4 (lower is better) Translates to: TTVMALTILNAKYWCTQIWDVLH*EFQCLS Trigger: TGATAAACACTGGAACTCTCAGTGCAAAACATCCCA...AATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR GCA 90 bp | ACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTAGGTTTGGGATGTTTTaGACTGAGAGTTCCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: TTVMALTILNAKYWCTQIRFGMF*TESSSV Trigger: AACACTGGAACTCTCAGTGCAAAACATCCCAAACCT...AATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR GCA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACATTAACGTCCACCATCTaGTTGGAGAGCTTGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: SHGLDNTECKILVYTDFTLTSTI*LESLFF Trigger: GAAAAACAAGCTCTCCAAGCAGATGGTGGACGTTAA...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR GCA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAACTTGACAATACTGAATaGAAAATACTGGTGTACACA | + |
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Preference number: 4 (lower is better) Translates to: NTGVHRFYRVTPESRITKLDNTE*KILVYT Trigger: TGTGTACACCAGTATTTTGCATTCAGTATTGTCAAG...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR TCA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACACATAAAAATATTGTTTaGCGGGAGAGTTGCCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: SHGLDNTECKILVYTDFTHKNIV*RESCPF Trigger: AAACGGGCAACTCTCCCGTCAAACAATATTTTTATG...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | ACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTCACATAAAACAAGATaGACATCACCTTGTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: TTVMALTILNAKYWCTQISHKTR*TSPCSP Trigger: AGGTGAACAAGGTGATGTCCATCTTGTTTTATGTGA...AATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CCA 90 bp | ACTAAAACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACTGAATGCAAAATACTaGTGTACACAGATTTTACAG | + |
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Preference number: 4 (lower is better) Translates to: TKTTVMALTILNAKYWCTLNAKY*CTQILQ Trigger: CTGTAAAATCTGTGTACACCAGTATTTTGCATTCAG...TGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTTTTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS CCA 90 bp | GGTCTCCCGGCCTCCCACGCCACCGCTCAAAGTCCGAGAACAGGCTaGACGATACCGCAAGGAGATCCCCTGGGATGGCCGGGCCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: GLPASHATAQSPRTG*TIPQGDPLGWPGPG Trigger: ACCCGGGCCCGGCCATCCCAGGGGATCTCCTTGCGGTATCGTCCAGCCTGTTCTCGGACTTTGAGCGGTGGCGTGGGAGGCCGGGAGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543548.1 |
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| CDS TCA 90 bp | TTGTCGCAGCAGTTCGGTGTCCATTGCAATCACCGGCTGGAATGCTaGCTTGGCGGGCCCTCCCCGCTCCGGCTCTCGGGGAGCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LSQQFGVHCNHRLEC*LGGPSPLRLSGSLS Trigger: GCTGAGGCTCCCCGAGAGCCGGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCGAACTGCTGCGACAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS TCA 90 bp | GGGCGGGGGCTCCAAGGGGGTGCTGTCGCTCAGCAGGACCCGCGGTaGGTTGTAGCGTCTCTGTTGTCGCAGCAGTTCGGTGTCCATTGC | + |
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Preference number: 5 (lower is better) Translates to: GRGLQGGAVAQQDPR*VVASLLSQQFGVHC Trigger: GCAATGGACACCGAACTGCTGCGACAACAGAGACGCTACAACTCACCGCGGGTCCTGCTGAGCGACAGCACCCCCTTGGAGCCCCCGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS CCA 90 bp | GCAGCAGTTCGGTGTCCATTGCAATCACCGGCTGGAATGCTGACTTaGCGGGCCCTCCCCGCTCCGGCTCTCGGGGAGCCTCAGCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: AAVRCPLQSPAGMLT*RALPAPALGEPQLW Trigger: CCAAAGCTGAGGCTCCCCGAGAGCCGGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCGAACTGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS CCA 90 bp | CTCAGGAGGTCCTTGTCCAGAACACAGTCCTTGCAAGCTTCCACGTaGGGGCGCAGCGTGCCAGCCGACGGTTCCGCGTCACCAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: LRRSLSRTQSLQAST*GRSVPADGSASPGT Trigger: GGTGCCTGGTGACGCGGAACCGTCGGCTGGCACGCTGCGCCCCCACGTGGAAGCTTGCAAGGACTGTGTTCTGGACAAGGACCTCCTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000541234.1 ENST00000544836.5 |
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| CDS GCA 90 bp | TGCAGCATGGGTGCCTCAGGAGGTCCTTGTCCAGAACACAGTCCTTaGAAGCTTCCACGTGGGGGCGCAGCGTGCCAGCCGACGGTTCCG | + |
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Preference number: 5 (lower is better) Translates to: CSMGASGGPCPEHSP*KLPRGGAACQPTVP Trigger: CGGAACCGTCGGCTGGCACGCTGCGCCCCCACGTGGAAGCTTGCAAGGACTGTGTTCTGGACAAGGACCTCCTGAGGCACCCATGCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541234.1 ENST00000544836.5 |
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| CDS CCA 90 bp | CGTCTCTGTTGTCGCAGCAGTTCGGTGTCCATTGCAATCACCGGCTaGAATGCTGACTTGGCGGGCCCTCCCCGCTCCGGCTCTCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: RLCCRSSSVSIAITG*NADLAGPPRSGSRG Trigger: TCCCCGAGAGCCGGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCGAACTGCTGCGACAACAGAGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS CCA 90 bp | GTGCAACCCAGACGCCCACACGTCCCGCAGCCGTCCTTAAGCCTCTaGGAACTGCAGCATGGGTGCCTCAGGAGGTCCTTGTCCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: VQPRRPHVPQPSLSL*ELQHGCLRRSLSRT Trigger: TGTTCTGGACAAGGACCTCCTGAGGCACCCATGCTGCAGTTCCCAGAGGCTTAAGGACGGCTGCGGGACGTGTGGGCGTCTGGGTTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS CCA 90 bp | ACCCAACCCAGACGCCCACACGTCCCGCAGCCGTCCTTAAGCCTCTaGGAACTGCAGCATGGGTGCCTCAGGAGGTCCTTGTCCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: TQPRRPHVPQPSLSL*ELQHGCLRRSLSRT Trigger: TGTTCTGGACAAGGACCTCCTGAGGCACCCATGCTGCAGTTCCCAGAGGCTTAAGGACGGCTGCGGGACGTGTGGGCGTCTGGGTTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544836.5 |
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| CDS CCA 90 bp | TCTCAACCCAGACGCCCACACGTCCCGCAGCCGTCCTTAAGCCTCTaGGAACTGCAGCATGGGTGCCTCAGGAGGTCCTTGTCCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: SQPRRPHVPQPSLSL*ELQHGCLRRSLSRT Trigger: TGTTCTGGACAAGGACCTCCTGAGGCACCCATGCTGCAGTTCCCAGAGGCTTAAGGACGGCTGCGGGACGTGTGGGCGTCTGGGTTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541234.1 |
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| CDS TCA 90 bp | GTACTCCCCTCGGTGACTCTTATGCTCCGCGTACCGTTTCCGCCGTaGTGTTCTGTTCGCCACCACGGGGCTGCCCACGTAATCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VLPSVTLMLRVPFPP*CSVRHHGAAHVILH Trigger: ATGGAGGATTACGTGGGCAGCCCCGTGGTGGCGAACAGAACATCACGGCGGAAACGGTACGCGGAGCATAAGAGTCACCGAGGGGAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS GCA 90 bp | CGAAGAGGATCGCCAGGAAGGGGTTACAGCAGGACAGTGACGGAGTaGCTGGGGAACTACGCTGGGTGGTCAGAGAAGGCATCCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: RRGSPGRGYSRTVTE*LGNYAGWSEKASLE Trigger: CTCCAAGGATGCCTTCTCTGACCACCCAGCGTAGTTCCCCAGGCACTCCGTCACTGTCCTGCTGTAACCCCTTCCTGGCGATCCTCTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544836.5 |
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| CDS TCA 90 bp | CTCCCCCAGCACCGTGACCTGGTGTCCCCGAATGTCGATGGCCGATaGCTTGTCGGTCACCCACAGACTCTCACTGTCACATACCGAGTA | + |
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Preference number: 5 (lower is better) Translates to: LPQHRDLVSPNVDGR*LVGHPQTLTVTYRV Trigger: TACTCGGTATGTGACAGTGAGAGTCTGTGGGTGACCGACAAGTCATCGGCCATCGACATTCGGGGACACCAGGTCACGGTGCTGGGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS CCA 90 bp | AAGGGGTTACAGCAGGACAGTGACGGAGTGCCTGGGGAACTACGCTaGGTGGTCAGAGAAGGCATCCTTGGAGAGGTGACCCAACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: KGLQQDSDGVPGELR*VVREGILGEVTQPR Trigger: TCTGGGTTGGGTCACCTCTCCAAGGATGCCTTCTCTGACCACCCAGCGTAGTTCCCCAGGCACTCCGTCACTGTCCTGCTGTAACCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544836.5 |
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| CDS TCA 90 bp | ATATCAGGCGAAGAGGATCGCCAGGAAGGGGTTACAGCAGGACAGTaGCGGAGTGCCTGGGGAACTACGCTGGGTGGTCAGAGAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: ISGEEDRQEGVTAGQ*RSAWGTTLGGQRRH Trigger: ATGCCTTCTCTGACCACCCAGCGTAGTTCCCCAGGCACTCCGTCACTGTCCTGCTGTAACCCCTTCCTGGCGATCCTCTTCGCCTGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544836.5 |
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| CDS TCA 90 bp | CAGTCCTTAGTCTCAGAACTTTGCTGCGGCCTGGGACCATGGACCTaGAGAGTGGGTGTCGCTGGCTGGGATGAGTGTGTACAGCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: QSLVSELCCGLGPWT*RVGVAGWDECVQLE Trigger: TTCCAGCTGTACACACTCATCCCAGCCAGCGACACCCACTCTTCAGGTCCATGGTCCCAGGCCGCAGCAAAGTTCTGAGACTAAGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS TCA 90 bp | GTCACCCACAGACTCTCACTGTCACATACCGAGTACTCCCCTCGGTaGCTCTTATGCTCCGCGTACCGTTTCCGCCGTGATGTTCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VTHRLSLSHTEYSPR*LLCSAYRFRRDVLF Trigger: GAACAGAACATCACGGCGGAAACGGTACGCGGAGCATAAGAGTCACCGAGGGGAGTACTCGGTATGTGACAGTGAGAGTCTGTGGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS TCA 90 bp | AAAGTAACCATGGCATCCGTGTGGCCGTTTCCAGGGACGTCGACATaGAGAGAAAGGTGGACGCGAGCTCGGTCATTCAAAGTCTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: KVTMASVWPFPGTST*RERWTRARSFKVSP Trigger: GGGGGAGACTTTGAATGACCGAGCTCGCGTCCACCTTTCTCTTCATGTCGACGTCCCTGGAAACGGCCACACGGATGCCATGGTTACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423158.4 ENST00000535299.5 |
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| CDS GCA 90 bp | TCAGCATGTCCATTCTCCAGAGATGTCACAGAGGATCCTGAGGTCTaGACTGGAGCTGCCACATCTTCTCCCTTGGCTTCAGGCAGACCG | + |
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Preference number: 5 (lower is better) Translates to: SACPFSRDVTEDPEV*TGAATSSPLASGRP Trigger: CGGTCTGCCTGAAGCCAAGGGAGAAGATGTGGCAGCTCCAGTGCAGACCTCAGGATCCTCTGTGACATCTCTGGAGAATGGACATGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS GCA 90 bp | AACCGAGGTCAGGGATGTTGGGAGGCCATTCCTGTGTCTCCAAGCTaGCTGGCAGCAACCATAATGGGCTTTGGTCTCAAGGCGCTTATC | + |
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Preference number: 5 (lower is better) Translates to: NRGQGCWEAIPVSPS*LAATIMGFGLKALI Trigger: GATAAGCGCCTTGAGACCAAAGCCCATTATGGTTGCTGCCAGGCAGCTTGGAGACACAGGAATGGCCTCCCAACATCCCTGACCTCGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541234.1 |
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| CDS CCA 90 bp | TCACGTCGTCTCAGAGTTCAACACCAGCACCATCCTGCTCTGTCCTaGAGCCTCTCCACCCTCAGTTTCTTCCCTCATGCAATGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SRRLRVQHQHHPALS*SLSTLSFFPHAMGN Trigger: GTTCCCCATTGCATGAGGGAAGAAACTGAGGGTGGAGAGGCTCCAGGACAGAGCAGGATGGTGCTGGTGTTGAACTCTGAGACGACGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS TCA 90 bp | CTGACTTTCAGCATGTCCATTCTCCAGAGATGTCACAGAGGATCCTaGGGTCTGCACTGGAGCTGCCACATCTTCTCCCTTGGCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTFSMSILQRCHRGS*GLHWSCHIFSLGFR Trigger: CCTGAAGCCAAGGGAGAAGATGTGGCAGCTCCAGTGCAGACCTCAGGATCCTCTGTGACATCTCTGGAGAATGGACATGCTGAAAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS TCA 90 bp | CCTTTCAACGCAGCAGCATGCCTGTCCAGGTCTCTCCCTTCCATCTaGCTTTCAGCATGTCCATTCTCCAGAGATGTCACAGAGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: PFNAAACLSRSLPSI*LSACPFSRDVTEDP Trigger: AGGATCCTCTGTGACATCTCTGGAGAATGGACATGCTGAAAGTCAGATGGAAGGGAGAGACCTGGACAGGCATGCTGCTGCGTTGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS TCA 90 bp | CGTGTCTATCCGTATCCACCGCCAGCCCACGAGTTTATTGTTCTCTaGAGTCAGTGCTCGGACGTAGGTTTGGGATGTTTTGCACTGAGA | + |
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Preference number: 5 (lower is better) Translates to: RVYPYPPPAHEFIVL*SQCSDVGLGCFALR Trigger: TCTCAGTGCAAAACATCCCAAACCTACGTCCGAGCACTGACTTCAGAGAACAATAAACTCGTGGGCTGGCGGTGGATACGGATAGACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | ACTAAAACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACAGGCTGGAATGCTGACTaGGCGGGCCCTCCCCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: TKTTVMALTILNAKYWCTGWNAD*AGPPRS Trigger: GGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCC...TGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTTTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS TCA 90 bp | GTTGGTTTAGTTCTTCTGAGCCCCACCTCCAACCTTGACCAGGGTTaGCTCGCCACAAAGCTAATGGAGCTTCAGCTTCAGGTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VGLVLLSPTSNLDQG*LATKLMELQLQVSS Trigger: TGAAGAAACCTGAAGCTGAAGCTCCATTAGCTTTGTGGCGAGTCAACCCTGGTCAAGGTTGGAGGTGGGGCTCAGAAGAACTAAACCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS TCA 90 bp | GGAAGTATCTGTTGGTTTAGTTCTTCTGAGCCCCACCTCCAACCTTaGCCAGGGTTGACTCGCCACAAAGCTAATGGAGCTTCAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GSICWFSSSEPHLQP*PGLTRHKANGASAS Trigger: TGAAGCTGAAGCTCCATTAGCTTTGTGGCGAGTCAACCCTGGTCAAGGTTGGAGGTGGGGCTCAGAAGAACTAAACCAACAGATACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS-3UTR CAA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAAGGAGAGTTGCCCGTTTaGATCTCCCCCAGCACCGTG | + |
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Preference number: 5 (lower is better) Translates to: NTGVHRFYRVTPESRITKGELPV*ISPSTV Trigger: CACGGTGCTGGGGGAGATCAAAACGGGCAACTCTCC...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS CCA 90 bp | AGGGATATCATTTACAAAGGTATCAAAAACCGAGGTCAGGGATGTTaGGAGGCCATTCCTGTGTCTCCAAGCTGCCTGGCAGCAACCATA | + |
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Preference number: 5 (lower is better) Translates to: RDIIYKGIKNRGQGC*EAIPVSPSCLAATI Trigger: TATGGTTGCTGCCAGGCAGCTTGGAGACACAGGAATGGCCTCCCAACATCCCTGACCTCGGTTTTTGATACCTTTGTAAATGATATCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541234.1 |
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| CDS CCA 90 bp | CTTGGATGCCACGGAGATAAGCGAGAAATATCACATAAAACAAGATaGACATCACCTTGTTCACCTGTAAGATCTGGCTGGCTGCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: LGCHGDKREISHKTR*TSPCSPVRSGWLRG Trigger: CCCGCGCAGCCAGCCAGATCTTACAGGTGAACAAGGTGATGTCCATCTTGTTTTATGTGATATTTCTCGCTTATCTCCGTGGCATCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543548.1 |
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| CDS-3UTR CAA 90 bp | ATGCAAAATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCTGTTTGACGGGAGAGTaGCCCGTTTTGATCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: MQNTGVHRFYRVTPESRICLTGE*PVLISP Trigger: GGGGGAGATCAAAACGGGCAACTCTCCCGTCAAACA...GATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATTTTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAACCCCTGCAACCGTTTTaGACCGGCCTGGCTTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: NTGVHRFYRVTPESRITKPLQPF*TGLASL Trigger: TAAGGAAGCCAGGCCGGTCAAAAACGGTTGCAGGGG...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAAGTTGTAGCGTCTCTGTaGTCGCAGCAGTTCGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NTGVHRFYRVTPESRITKVVASL*SQQFGV Trigger: GACACCGAACTGCTGCGACAACAGAGACGCTACAAC...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS GCA 90 bp | TATTCACGTGGTTATTATACGGTTTTAACAGTTCTTCTCCAAACCTaGCTTTCAACGCAGCAGCATGCCTGTCCAGGTCTCTCCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: YSRGYYTVLTVLLQT*LSTQQHACPGLSLP Trigger: TGGAAGGGAGAGACCTGGACAGGCATGCTGCTGCGTTGAAAGGCAGGTTTGGAGAAGAACTGTTAAAACCGTATAATAACCACGTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS-3UTR CAA 90 bp | AACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTCGATGGCCGATGACTaGTCGGTCACCCACAGACTC | + |
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Preference number: 5 (lower is better) Translates to: NNSHGLDNTECKILVYTDSMADD*SVTHRL Trigger: GAGTCTGTGGGTGACCGACAAGTCATCGGCCATCGA...ATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS GCA 90 bp | TATTGTTCTCTGAAGTCAGTGCTCGGACGTAGGTTTGGGATGTTTTaGACTGAGAGTTCCAGTGTTTATCATCAATACCCCTGCAACCGT | + |
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Preference number: 5 (lower is better) Translates to: YCSLKSVLGRRFGMF*TESSSVYHQYPCNR Trigger: ACGGTTGCAGGGGTATTGATGATAAACACTGGAACTCTCAGTGCAAAACATCCCAAACCTACGTCCGAGCACTGACTTCAGAGAACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | ACTAAAACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACAGCAGTTCGGTGTCCATaGCAATCACCGGCTGGAATG | + |
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Preference number: 5 (lower is better) Translates to: TKTTVMALTILNAKYWCTAVRCP*QSPAGM Trigger: CATTCCAGCCGGTGATTGCAATGGACACCGAACTGC...TGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTTTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS GCA 90 bp | GCGAGTCTTCTGGCAAACTCCTTTGATCCATGTTGTTACCTTGGATaGCACGGAGATAAGCGAGAAATATCACATAAAACAAGATGGACA | + |
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Preference number: 5 (lower is better) Translates to: ASLLANSFDPCCYLG*HGDKREISHKTRWT Trigger: TGTCCATCTTGTTTTATGTGATATTTCTCGCTTATCTCCGTGGCATCCAAGGTAACAACATGGATCAAAGGAGTTTGCCAGAAGACTCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS GCA 90 bp | CTTAACGTCCACCATCTGCTTGGAGAGCTTGTTTTTCAAAATATCTaGCTGGATCAGCTTAATAATGAGGGAATTGAGCGAGTCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LNVHHLLGELVFQNI*LDQLNNEGIERVFW Trigger: CCAGAAGACTCGCTCAATTCCCTCATTATTAAGCTGATCCAGGCAGATATTTTGAAAAACAAGCTCTCCAAGCAGATGGTGGACGTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS-3UTR CAA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAAAAGATGGACATCACCTaGTTCACCTGTAAGATCGTG | + |
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Preference number: 5 (lower is better) Translates to: NTGVHRFYRVTPESRITKKMDIT*FTCKIV Trigger: CACGATCTTACAGGTGAACAAGGTGATGTCCATCTT...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | AATACTGGTGTACACAGATTTTACAGAGTGACTCCTGAGAGCCGGATCACAAAATTCTGGCAAACTCCTTaGATCCATGTTGTTACCTTG | + |
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Preference number: 5 (lower is better) Translates to: NTGVHRFYRVTPESRITKFWQTP*IHVVTL Trigger: CAAGGTAACAACATGGATCAAAGGAGTTTGCCAGAA...TTTTGTGATCCGGCTCTCAGGAGTCACTCTGTAAAATCTGTGTACACCAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACATGCTCGGACGTAGGTTaGGGATGTTTTGCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHGLDNTECKILVYTDFTCSDVG*GCFALR Trigger: TCTCAGTGCAAAACATCCCAAACCTACGTCCGAGCA...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | AACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATCAGCCCACGAGTTTATaGTTCTCTGAAGTCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NNSHGLDNTECKILVYTDQPTSL*FSEVSA Trigger: AGCACTGACTTCAGAGAACAATAAACTCGTGGGCTG...ATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS CCA 90 bp | CTTGGATGCCACGGAGATAAGCGAGAAATATCACATAAAACAAGATaGACATCACCTTGTTCACCTGTAAGATCTGAAAAGGAAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LGCHGDKREISHKTR*TSPCSPVRSEKETQ Trigger: CTGTGTTTCCTTTTCAGATCTTACAGGTGAACAAGGTGATGTCCATCTTGTTTTATGTGATATTTCTCGCTTATCTCCGTGGCATCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331010.7 |
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| CDS-3UTR CAA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACAATCCATGTTGTTACCTaGGATGCCACGGAGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHGLDNTECKILVYTDFTIHVVT*DATEIS Trigger: GCTTATCTCCGTGGCATCCAAGGTAACAACATGGAT...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | AGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTTACAACGTCCACCATCTGCTaGGAGAGCTTGTTTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SHGLDNTECKILVYTDFTTSTIC*ESLFFK Trigger: TTTGAAAAACAAGCTCTCCAAGCAGATGGTGGACGT...TGTAAAATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS-3UTR CAA 90 bp | AACAACAGTCATGGCCTTGACAATACTGAATGCAAAATACTGGTGTACACAGATTTAATAATGAGGGAATaGAGCGAGTCTTCTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: NNSHGLDNTECKILVYTDLIMRE*SESSGK Trigger: TTTGCCAGAAGACTCGCTCAATTCCCTCATTATTAA...ATCTGTGTACACCAGTATTTTGCATTCAGTATTGTCAAGGCCATGACTGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423158.4 |
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| CDS CCA 72 bp | ACAGGCTGGACGATACCGCAAGGAGATCCCCTGGGATaGCCGGGCCCGGGTGCCCGCCGCTCCCCGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGWTIPQGDPLG*PGPGARRSPEG Trigger: CCCCTCCGGGGAGCGGCGGGCACCCGGGCCCGGCCATCCCAGGGGATCTCCTTGCGGTATCGTCCAGCCTGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543548.1 |
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| CDS CCA 72 bp | CGAGAACAGGCTGGACGATACCGCAAGGAGATCCCCTaGGATGGCCGGGCCCGGGTGCCCGCCGCTCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: REQAGRYRKEIP*DGRARVPAAPR Trigger: CCGGGGAGCGGCGGGCACCCGGGCCCGGCCATCCCAGGGGATCTCCTTGCGGTATCGTCCAGCCTGTTCTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543548.1 |
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| CDS GCA 72 bp | CCCGCCGCTCCCCGGAGGGGTCCCAGATGTGCGGGCTaGGTACGGAGCTCCAACATCTGCGCAAAGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAAPRRGPRCAG*VRSSNICAKAQ Trigger: CTGGGCCTTTGCGCAGATGTTGGAGCTCCGTACGCAGCCCGCACATCTGGGACCCCTCCGGGGAGCGGCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543548.1 |
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| CDS GCA 72 bp | CCCAGATGTGCGGGCTGCGTACGGAGCTCCAACATCTaGGCAAAGGCCCAGGGTGGGGTGGCCACCGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRCAGCVRSSNI*AKAQGGVATGW Trigger: CCACCCGGTGGCCACCCCACCCTGGGCCTTTGCGCAGATGTTGGAGCTCCGTACGCAGCCCGCACATCTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543548.1 |
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| CDS CCA 72 bp | CGGTGTCCATTGCAATCACCGGCTGGAATGCTGACTTaGCGGGCCCTCCCCGCTCCGGCTCTCGGGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RCPLQSPAGMLT*RALPAPALGEP Trigger: AGGCTCCCCGAGAGCCGGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS TCA 72 bp | CAGTTCGGTGTCCATTGCAATCACCGGCTGGAATGCTaGCTTGGCGGGCCCTCCCCGCTCCGGCTCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QFGVHCNHRLEC*LGGPSPLRLSG Trigger: CCCCGAGAGCCGGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCGAACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS GCA 72 bp | CCTTGTTCACCTGTAAGATCTGGCTGGCTGCGCGGGTaGCCAGGTCTCCCGGCCTCCCACGCCACCGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PCSPVRSGWLRG*PGLPASHATAQ Trigger: TTGAGCGGTGGCGTGGGAGGCCGGGAGACCTGGGCACCCGCGCAGCCAGCCAGATCTTACAGGTGAACAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543548.1 |
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| CDS CAA 90 bp | CGCAGCAGTTCGGTGTCCATTGCAATCACCGGCTGGAATGCTGACTaGGCGGGCCCTCCCCGCTCCGGCTCTCGGGGAGCCTCAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSSVSIAITGWNAD*AGPPRSGSRGASAL Trigger: CAAAGCTGAGGCTCCCCGAGAGCCGGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCGAACTGCTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS GCA 72 bp | AAGAAAGTAGTTGCGCCGGGCTGCGTCGCGGGGCGGTaGGCGGAGCTGTTCGGAAGGGAGAGGAGCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: KKVVAPGCVAGR*AELFGRERSFN Trigger: GTTGAAGCTCCTCTCCCTTCCGAACAGCTCCGCGCACCGCCCCGCGACGCAGCCCGGCGCAACTACTTTCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423158.4 ENST00000535299.5 |
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| CDS GCA 72 bp | GGTGCCTCAGGAGGTCCTTGTCCAGAACACAGTCCTTaGAAGCTTCCACGTGGGGGCGCAGCGTGCCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GASGGPCPEHSP*KLPRGGAACQP Trigger: CGGCTGGCACGCTGCGCCCCCACGTGGAAGCTTGCAAGGACTGTGTTCTGGACAAGGACCTCCTGAGGCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541234.1 ENST00000544836.5 |
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| CDS CCA 72 bp | TGTCGCAGCAGTTCGGTGTCCATTGCAATCACCGGCTaGAATGCTGACTTGGCGGGCCCTCCCCGCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CRSSSVSIAITG*NADLAGPPRSG Trigger: GCCGGAGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCGAACTGCTGCGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS CCA 72 bp | GCCTCCCACGCCACCGCTCAAAGTCCGAGAACAGGCTaGACGATACCGCAAGGAGATCCCCTGGGATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: ASHATAQSPRTG*TIPQGDPLGWP Trigger: CGGCCATCCCAGGGGATCTCCTTGCGGTATCGTCCAGCCTGTTCTCGGACTTTGAGCGGTGGCGTGGGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543548.1 |
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| CDS CAA 72 bp | GGGTGCCTCAGGAGGTCCTTGTCCAGAACACAGTCCTaGCAAGCTTCCACGTGGGGGCGCAGCGTGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GCLRRSLSRTQS*QASTWGRSVPA Trigger: GGCTGGCACGCTGCGCCCCCACGTGGAAGCTTGCAAGGACTGTGTTCTGGACAAGGACCTCCTGAGGCACCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541234.1 ENST00000544836.5 |
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| CDS CCA 72 bp | AGACGCCCACACGTCCCGCAGCCGTCCTTAAGCCTCTaGGAACTGCAGCATGGGTGCCTCAGGAGGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RRPHVPQPSLSL*ELQHGCLRRSL Trigger: CAAGGACCTCCTGAGGCACCCATGCTGCAGTTCCCAGAGGCTTAAGGACGGCTGCGGGACGTGTGGGCGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000535299.5 ENST00000541234.1 ENST00000544836.5 |
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| CDS CCA 72 bp | TCCTTGTCCAGAACACAGTCCTTGCAAGCTTCCACGTaGGGGCGCAGCGTGCCAGCCGACGGTTCCGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSRTQSLQAST*GRSVPADGSAS Trigger: TGACGCGGAACCGTCGGCTGGCACGCTGCGCCCCCACGTGGAAGCTTGCAAGGACTGTGTTCTGGACAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000541234.1 ENST00000544836.5 |
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| CDS TCA 72 bp | CTCCAAGGGGGTGCTGTCGCTCAGCAGGACCCGCGGTaGGTTGTAGCGTCTCTGTTGTCGCAGCAGTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: LQGGAVAQQDPR*VVASLLSQQFG Trigger: ACCGAACTGCTGCGACAACAGAGACGCTACAACTCACCGCGGGTCCTGCTGAGCGACAGCACCCCCTTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS CAA 90 bp | GCGGTGAGTTGTAGCGTCTCTGTTGTCGCAGCAGTTCGGTGTCCATaGCAATCACCGGCTGGAATGCTGACTTGGCGGGCCCTCCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: AVSCSVSVVAAVRCP*QSPAGMLTWRALPA Trigger: AGCGGGGAGGGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCGAACTGCTGCGACAACAGAGACGCTACAACTCACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS TCA 72 bp | TCGGTGACTCTTATGCTCCGCGTACCGTTTCCGCCGTaGTGTTCTGTTCGCCACCACGGGGCTGCCCACGTA | + |
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Preference number: 6 (lower is better) Translates to: SVTLMLRVPFPP*CSVRHHGAAHV Trigger: TACGTGGGCAGCCCCGTGGTGGCGAACAGAACATCACGGCGGAAACGGTACGCGGAGCATAAGAGTCACCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS TCA 72 bp | GAAGAGGATCGCCAGGAAGGGGTTACAGCAGGACAGTaGCGGAGTGCCTGGGGAACTACGCTGGGTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: EEDRQEGVTAGQ*RSAWGTTLGGQ Trigger: CTGACCACCCAGCGTAGTTCCCCAGGCACTCCGTCACTGTCCTGCTGTAACCCCTTCCTGGCGATCCTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544836.5 |
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| CDS GCA 72 bp | TCGCCAGGAAGGGGTTACAGCAGGACAGTGACGGAGTaGCTGGGGAACTACGCTGGGTGGTCAGAGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SPGRGYSRTVTE*LGNYAGWSEKA Trigger: TGCCTTCTCTGACCACCCAGCGTAGTTCCCCAGGCACTCCGTCACTGTCCTGCTGTAACCCCTTCCTGGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544836.5 |
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| CDS CCA 72 bp | AACTTTGCTGCGGCCTGGGACCATGGACCTGAAGAGTaGGTGTCGCTGGCTGGGATGAGTGTGTACAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: NFAAAWDHGPEE*VSLAGMSVYSW Trigger: CCAGCTGTACACACTCATCCCAGCCAGCGACACCCACTCTTCAGGTCCATGGTCCCAGGCCGCAGCAAAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS CAA 90 bp | CCCAGCACCGTGACCTGGTGTCCCCGAATGTCGATGGCCGATGACTaGTCGGTCACCCACAGACTCTCACTGTCACATACCGAGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: PSTVTWCPRMSMADD*SVTHRLSLSHTEYS Trigger: GGAGTACTCGGTATGTGACAGTGAGAGTCTGTGGGTGACCGACAAGTCATCGGCCATCGACATTCGGGGACACCAGGTCACGGTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS TCA 72 bp | CACCGTGACCTGGTGTCCCCGAATGTCGATGGCCGATaGCTTGTCGGTCACCCACAGACTCTCACTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: HRDLVSPNVDGR*LVGHPQTLTVT Trigger: TGTGACAGTGAGAGTCTGTGGGTGACCGACAAGTCATCGGCCATCGACATTCGGGGACACCAGGTCACGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS TCA 72 bp | GTCTCAGAACTTTGCTGCGGCCTGGGACCATGGACCTaGAGAGTGGGTGTCGCTGGCTGGGATGAGTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: VSELCCGLGPWT*RVGVAGWDECV Trigger: TACACACTCATCCCAGCCAGCGACACCCACTCTTCAGGTCCATGGTCCCAGGCCGCAGCAAAGTTCTGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS GCA 72 bp | CAGCCGTCCTTAAGCCTCTGGGAACTGCAGCATGGGTaGCTCAGGAGGTCCTTGTCCAGAACACAGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: QPSLSLWELQHG*LRRSLSRTQSL Trigger: CAAGGACTGTGTTCTGGACAAGGACCTCCTGAGGCACCCATGCTGCAGTTCCCAGAGGCTTAAGGACGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000541234.1 ENST00000544836.5 |
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| CDS CAA 72 bp | TGTAGCGTCTCTGTTGTCGCAGCAGTTCGGTGTCCATaGCAATCACCGGCTGGAATGCTGACTTGGCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: CSVSVVAAVRCP*QSPAGMLTWRA Trigger: GGCCCGCCAAGTCAGCATTCCAGCCGGTGATTGCAATGGACACCGAACTGCTGCGACAACAGAGACGCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS GCA 72 bp | CAGCCGTCCTTAAGCCTCTGGGAACTGCAGCATGGGTaGCTCAGGAGGTCCTTGTCCAGAACACAGTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: QPSLSLWELQHG*LRRSLSRTQSL Trigger: TAAGGACTGTGTTCTGGACAAGGACCTCCTGAGGCACCCATGCTGCAGTTCCCAGAGGCTTAAGGACGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS CAA 72 bp | GTGACCTGGTGTCCCCGAATGTCGATGGCCGATGACTaGTCGGTCACCCACAGACTCTCACTGTCACATACC | + |
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Preference number: 6 (lower is better) Translates to: VTWCPRMSMADD*SVTHRLSLSHT Trigger: GGTATGTGACAGTGAGAGTCTGTGGGTGACCGACAAGTCATCGGCCATCGACATTCGGGGACACCAGGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS TCA 72 bp | AGACTCTCACTGTCACATACCGAGTACTCCCCTCGGTaGCTCTTATGCTCCGCGTACCGTTTCCGCCGTGAT | + |
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Preference number: 6 (lower is better) Translates to: RLSLSHTEYSPR*LLCSAYRFRRD Trigger: ATCACGGCGGAAACGGTACGCGGAGCATAAGAGTCACCGAGGGGAGTACTCGGTATGTGACAGTGAGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS TCA 72 bp | ATGGCATCCGTGTGGCCGTTTCCAGGGACGTCGACATaGAGAGAAAGGTGGACGCGAGCTCGGTCATTCAAA | + |
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Preference number: 6 (lower is better) Translates to: MASVWPFPGTST*RERWTRARSFK Trigger: TTTGAATGACCGAGCTCGCGTCCACCTTTCTCTTCATGTCGACGTCCCTGGAAACGGCCACACGGATGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423158.4 ENST00000535299.5 |
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| CDS GCA 72 bp | CAGGGATGTTGGGAGGCCATTCCTGTGTCTCCAAGCTaGCTGGCAGCAACCATAATGGGCTTTGGTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: QGCWEAIPVSPS*LAATIMGFGLK Trigger: CTTGAGACCAAAGCCCATTATGGTTGCTGCCAGGCAGCTTGGAGACACAGGAATGGCCTCCCAACATCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541234.1 |
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| CDS TCA 72 bp | GTTCTTCTGAGCCCCACCTCCAACCTTGACCAGGGTTaGCTCGCCACAAAGCTAATGGAGCTTCAGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: VLLSPTSNLDQG*LATKLMELQLQ Trigger: CTGAAGCTGAAGCTCCATTAGCTTTGTGGCGAGTCAACCCTGGTCAAGGTTGGAGGTGGGGCTCAGAAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS CCA 72 bp | GTCTCCAAGCTGCCTGGCAGCAACCATAATGGGCTTTaGTCTCAAGGCGCTTATCTATGGGCAGGTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSKLPGSNHNGL*SQGAYLWAGCP Trigger: AGGACAACCTGCCCATAGATAAGCGCCTTGAGACCAAAGCCCATTATGGTTGCTGCCAGGCAGCTTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541234.1 |
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| CDS TCA 72 bp | CCGTATCCACCGCCAGCCCACGAGTTTATTGTTCTCTaGAGTCAGTGCTCGGACGTAGGTTTGGGATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: PYPPPAHEFIVL*SQCSDVGLGCF Trigger: AAAACATCCCAAACCTACGTCCGAGCACTGACTTCAGAGAACAATAAACTCGTGGGCTGGCGGTGGATACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS TCA 72 bp | TGTTGGTTTAGTTCTTCTGAGCCCCACCTCCAACCTTaGCCAGGGTTGACTCGCCACAAAGCTAATGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: CWFSSSEPHLQP*PGLTRHKANGA Trigger: AGCTCCATTAGCTTTGTGGCGAGTCAACCCTGGTCAAGGTTGGAGGTGGGGCTCAGAAGAACTAAACCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS CAA 72 bp | CGGCCTGGCTTCCTTACATCGCGTTTCATAAAAATATaGTTTGACGGGAGAGTTGCCCGTTTTGATCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RPGFLTSRFIKI*FDGRVARFDLP Trigger: GGGGAGATCAAAACGGGCAACTCTCCCGTCAAACAATATTTTTATGAAACGCGATGTAAGGAAGCCAGGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS GCA 72 bp | CTGAAGTCAGTGCTCGGACGTAGGTTTGGGATGTTTTaGACTGAGAGTTCCAGTGTTTATCATCAATACCCC | + |
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Preference number: 6 (lower is better) Translates to: LKSVLGRRFGMF*TESSSVYHQYP Trigger: GGGGTATTGATGATAAACACTGGAACTCTCAGTGCAAAACATCCCAAACCTACGTCCGAGCACTGACTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS GCA 72 bp | GGTTATTATACGGTTTTAACAGTTCTTCTCCAAACCTaGCTTTCAACGCAGCAGCATGCCTGTCCAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GYYTVLTVLLQT*LSTQQHACPGL Trigger: GAGACCTGGACAGGCATGCTGCTGCGTTGAAAGGCAGGTTTGGAGAAGAACTGTTAAAACCGTATAATAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS TCA 72 bp | TCCAGTGTTTATCATCAATACCCCTGCAACCGTTTTTaGCCGGCCTGGCTTCCTTACATCGCGTTTCATAAA | + |
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Preference number: 6 (lower is better) Translates to: SSVYHQYPCNRF*PAWLPYIAFHK Trigger: TTTATGAAACGCGATGTAAGGAAGCCAGGCCGGTCAAAAACGGTTGCAGGGGTATTGATGATAAACACTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331010.7 ENST00000423158.4 |
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| CDS GCA 72 bp | AAAAGAACAGACACGGACTCTGCTCTTAAGGGACTTTaGATTTTCATGAGCAGAGCTCATCCATCAGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: KRTDTDSALKGL*IFMSRAHPSVS Trigger: GCTCACTGATGGATGAGCTCTGCTCATGAAAATGCAAAGTCCCTTAAGAGCAGAGTCCGTGTCTGTTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544836.5 |
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| CDS CCA 72 bp | CCAAAGACTGCAGGGCATCCTAGCAAGGTATTCACGTaGTTATTATACGGTTTTAACAGTTCTTCTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PKTAGHPSKVFT*LLYGFNSSSPN Trigger: GTTTGGAGAAGAACTGTTAAAACCGTATAATAACCACGTGAATACCTTGCTAGGATGCCCTGCAGTCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535299.5 |
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| CDS CAA 72 bp | GTCTTCTGGCAAACTCCTTTGATCCATGTTGTTACCTaGGATGCCACGGAGATAAGCGAGAAATATCACATA | + |
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Preference number: 6 (lower is better) Translates to: VFWQTPLIHVVT*DATEISEKYHI Trigger: TATGTGATATTTCTCGCTTATCTCCGTGGCATCCAAGGTAACAACATGGATCAAAGGAGTTTGCCAGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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| CDS CAA 72 bp | ACTAATAAAATATACGTATTGAATGCACAATCTCGGTaGGGCACTCTTCTCTGTGCAGGTAACAGTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TNKIYVLNAQSR*GTLLCAGNSAA Trigger: GGCTGCACTGTTACCTGCACAGAGAAGAGTGCCCAACCGAGATTGTGCATTCAATACGTATATTTTATTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544836.5 |
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| CDS CAA 90 bp | ATTGAGCGAGTCTTCTGGCAAACTCCTTTGATCCATGTTGTTACCTaGGATGCCACGGAGATAAGCGAGAAATATCACATAAAACAAGAT | + |
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Preference number: 6 (lower is better) Translates to: IERVFWQTPLIHVVT*DATEISEKYHIKQD Trigger: ATCTTGTTTTATGTGATATTTCTCGCTTATCTCCGTGGCATCCAAGGTAACAACATGGATCAAAGGAGTTTGCCAGAAGACTCGCTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331010.7 ENST00000423158.4 ENST00000543548.1 |
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