RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NT5DC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000111696

Ensembl transcript IDs: ENST00000392876.8, ENST00000415849.1, ENST00000447799.5, ENST00000465502.1

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TACAGGCTTGTCAGGGAGAGGCACTGGGCTGTAATGTGGCCACAATaGGGTCTCACTGACCCCACAAGGGGCTCTGGAGCTGGGATGGCC +
Preference number: 1 (lower is better)
Translates to: YRLVRERHWAVMWPQ*GLTDPTRGSGAGMA
Trigger: GGCCATCCCAGCTCCAGAGCCCCTTGTGGGGTCAGTGAGACCTCATTGTGGCCACATTACAGCCCAGTGCCTCTCCCTGACAAGCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp CCATATGGAGCCGGTAAGGGTTACAGGCAGGAAGGGGGTATGATCTaGGGCAGGCAGGGCTCTTCAGCAGGGGAAACTCCTCATAAGGGC +
Preference number: 1 (lower is better)
Translates to: PYGAGKGYRQEGGMI*GRQGSSAGETPHKG
Trigger: GCCCTTATGAGGAGTTTCCCCTGCTGAAGAGCCCTGCCTGCCCCAGATCATACCCCCTTCCTGCCTGTAACCCTTACCGGCTCCATATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp GTTCACATGGGAATGACTGTGTTCGGCCCCGTTACCGCCACGACATaGGTCTACAGTCTGCAAGGTACACAGTCAGTGAGCCTTGGTGGC +
Preference number: 1 (lower is better)
Translates to: VHMGMTVFGPVTATT*VYSLQGTQSVSLGG
Trigger: GCCACCAAGGCTCACTGACTGTGTACCTTGCAGACTGTAGACCCATGTCGTGGCGGTAACGGGGCCGAACACAGTCATTCCCATGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp AGAAGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTaGAGAATGGCGTGCAGGAAGGTTCATAGGACAGTGCTGTGGGCT +
Preference number: 1 (lower is better)
Translates to: RSTVAGWVPRKQILR*RMACRKVHRTVLWA
Trigger: AGCCCACAGCACTGTCCTATGAACCTTCCTGCACGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 90 bp TTACCGCCACGACATGGGTCTACAGTCTGCAAGGTACACAGTCAGTaGGCCTTGGTGGCCCAGATGTCAGGCTTCTGTCACATGGGAGAT +
Preference number: 1 (lower is better)
Translates to: LPPRHGSTVCKVHSQ*ALVAQMSGFCHMGD
Trigger: ATCTCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTGTGTACCTTGCAGACTGTAGACCCATGTCGTGGCGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp CACTCGTTTCTTGCAGAAGGCTCTACAGAAGGCTGTTCCACTAGCTaGCAGGTTTTGACCAGAGCTCTCATCTCCTCTCTCCTGCCCTCC +
Preference number: 1 (lower is better)
Translates to: HSFLAEGSTEGCSTS*QVLTRALISSLLPS
Trigger: GGAGGGCAGGAGAGAGGAGATGAGAGCTCTGGTCAAAACCTGCCAGCTAGTGGAACAGCCTTCTGTAGAGCCTTCTGCAAGAAACGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR CCA 90 bp TCACAGCAGCGTTTTACCATTGTGGAGCCCACGAAATCAGCCTTCTaGAAGCAGCTAATCTTTGCCCATCACTGTGCCCCTGCAGTTCCC +
Preference number: 1 (lower is better)
Translates to: SQQRFTIVEPTKSAF*KQLIFAHHCAPAVP
Trigger: GGGAACTGCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTCCAGAAGGCTGATTTCGTGGGCTCCACAATGGTAAAACGCTGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR CCA 90 bp ACAGTCAGTGAGCCTTGGTGGCCCAGATGTCAGGCTTCTGTCACATaGGAGATCTCAACACTGCCAAGCTCAATGGCCCAGAGACTGAAA +
Preference number: 1 (lower is better)
Translates to: TVSEPWWPRCQASVT*EISTLPSSMAQRLK
Trigger: TTTCAGTCTCTGGGCCATTGAGCTTGGCAGTGTTGAGATCTCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp GACATGGGTCTACAGTCTGCAAGGTACACAGTCAGTGAGCCTTGGTaGCCCAGATGTCAGGCTTCTGTCACATGGGAGATCTCAACACTG +
Preference number: 1 (lower is better)
Translates to: DMGLQSARYTVSEPW*PRCQASVTWEISTL
Trigger: CAGTGTTGAGATCTCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTGTGTACCTTGCAGACTGTAGACCCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp CACGACATGGGTCTACAGTCTGCAAGGTACACAGTCAGTGAGCCTTaGTGGCCCAGATGTCAGGCTTCTGTCACATGGGAGATCTCAACA +
Preference number: 1 (lower is better)
Translates to: HDMGLQSARYTVSEP*WPRCQASVTWEIST
Trigger: TGTTGAGATCTCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTGTGTACCTTGCAGACTGTAGACCCATGTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 90 bp CATTGTGGAGCCCACGAAATCAGCCTTCTGGAAGCAGCTAATCTTTaGCCATCACTGTGCCCCTGCAGTTCCCAATGCATAGCCCGTAAA +
Preference number: 1 (lower is better)
Translates to: HCGAHEISLLEAANL*PSLCPCSSQCIARK
Trigger: TTTACGGGCTATGCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTCCAGAAGGCTGATTTCGTGGGCTCCACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR CCA 90 bp ACAGGAGTGAAATCTAAGAGAAGGCTGGACATGGCTAAGTTGTGGTaGCCATCTTCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTT +
Preference number: 1 (lower is better)
Translates to: TGVKSKRRLDMAKLW*PSSSSPGQSKHLSV
Trigger: AACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGAAGATGGCCACCACAACTTAGCCATGTCCAGCCTTCTCTTAGATTTCACTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp ATCACAGGAGTGAAATCTAAGAGAAGGCTGGACATGGCTAAGTTGTaGTGGCCATCTTCCTCCTCCCCTGGCCAATCCAAGCACCTCTCA +
Preference number: 1 (lower is better)
Translates to: ITGVKSKRRLDMAKL*WPSSSSPGQSKHLS
Trigger: TGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGAAGATGGCCACCACAACTTAGCCATGTCCAGCCTTCTCTTAGATTTCACTCCTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 90 bp GGATTAATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATaGCTGTGTTCGGCCCCGTTACCGCCACGACATGGGTCTACAGTC +
Preference number: 1 (lower is better)
Translates to: GLIIKWDVPPSFTWE*LCSAPLPPRHGSTV
Trigger: GACTGTAGACCCATGTCGTGGCGGTAACGGGGCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp GAAAAAGAAAATCAGCTGTGCAAGTCCCTTCCAAAGGGACCTCCATaGGCCTTGCTGGACTGTCATATTTGTGATGGCTGCTGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: EKENQLCKSLPKGPP*ALLDCHICDGCCPG
Trigger: TCCAGGGCAGCAGCCATCACAAATATGACAGTCCAGCAAGGCCCATGGAGGTCCCTTTGGAAGGGACTTGCACAGCTGATTTTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 90 bp GAAGCAGCTAATCTTTGCCCATCACTGTGCCCCTGCAGTTCCCAATaGATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAA +
Preference number: 1 (lower is better)
Translates to: EAANLCPSLCPCSSQ*IARKCSGNVPWRSQ
Trigger: TTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR GCA 90 bp ATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTaGCGCCAACACAATCCATTAGAGCAGGGGCTAGCAAGCCACAGC +
Preference number: 1 (lower is better)
Translates to: IRLFICMFSARESCH*RQHNPLEQGLASHS
Trigger: GCTGTGGCTTGCTAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 90 bp CCAGCTATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTaGCATTGCCGCCAACACAATCCATTAGAGCAGGGGCTAGCAAGC +
Preference number: 1 (lower is better)
Translates to: PAIRLFICMFSARES*HCRQHNPLEQGLAS
Trigger: GCTTGCTAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 90 bp AGGTTGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTaGAGAAACTCTTGGTCATTTCTCGCATCTCCTTCCTTTCCTTTT +
Preference number: 1 (lower is better)
Translates to: RLGSGLCGTGFQTGH*RNSWSFLASPSFPF
Trigger: AAAAGGAAAGGAAGGAGATGCGAGAAATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR TCA 90 bp TGTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTaGCCTGCTAGAATACAGACATGGCATCAAGTGGTCTCACCTATC +
Preference number: 1 (lower is better)
Translates to: CSGNVPWRSQEPFQA*PARIQTWHQVVSPI
Trigger: GATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR GCA 90 bp AAGGGACCTCCATGGGCCTTGCTGGACTGTCATATTTGTGATGGCTaGTGCCCTGGACTCATCATTGTTCACATAATTCTTAGAAAATCA +
Preference number: 1 (lower is better)
Translates to: KGPPWALLDCHICDG*CPGLIIVHIILRKS
Trigger: TGATTTTCTAAGAATTATGTGAACAATGATGAGTCCAGGGCAGCAGCCATCACAAATATGACAGTCCAGCAAGGCCCATGGAGGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 90 bp ACAGAACTTTCTCCTCTCTGCATCCCAGCTATAAGGTTATTCATCTaGATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAACACAAT +
Preference number: 1 (lower is better)
Translates to: TELSPLCIPAIRLFI*MFSARESCHCRQHN
Trigger: ATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATAGCTGGGATGCAGAGAGGAGAAAGTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 90 bp CAGATGAAACCAACTCAGGTGGTGTTTCCAGGTTTAACAAGCTCCTaGGAGACCTACCACAAATGTTTTGGTTCTTCAAACCCACTCGTT +
Preference number: 1 (lower is better)
Translates to: QMKPTQVVFPGLTSS*ETYHKCFGSSNPLV
Trigger: AACGAGTGGGTTTGAAGAACCAAAACATTTGTGGTAGGTCTCCCAGGAGCTTGTTAAACCTGGAAACACCACCTGAGTTGGTTTCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 90 bp ACAAACTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTaGAATCTAAGAGAAGGCTGGACATGGCTAAGTTGTGGTGGCCAT +
Preference number: 1 (lower is better)
Translates to: TNYTNSQIVAQTSQE*NLREGWTWLSCGGH
Trigger: ATGGCCACCACAACTTAGCCATGTCCAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 90 bp ATCTGTTCCAATAAGCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTaGATGTATTGCTCCGTGTTCATGATTTTGAGCTCAGATCTCAAC +
Preference number: 1 (lower is better)
Translates to: ICSNKPVKVCSQVMV*MYCSVFMILSSDLN
Trigger: GTTGAGATCTGAGCTCAAAATCATGAACACGGAGCAATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR TCA 90 bp TGTGTCTATATAATCTTCATGGAAATGACCAGTAGAAATGCAGACTaGCACGGGTGTGATTCACGACTCAAATACCAGGAGTGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: CVYIIFMEMTSRNAD*HGCDSRLKYQEWPP
Trigger: AGGAGGCCACTCCTGGTATTTGAGTCGTGAATCACACCCGTGTCAGTCTGCATTTCTACTGGTCATTTCCATGAAGATTATATAGACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR CCA 90 bp AATTTCGTCTTAGAGCATTCTAGACAAGGAGCCCCAAGTGGTCTTTaGCAGCAAATGAGCAGGCAGAAAAGTGGAATTCAGTTCCAGTAT +
Preference number: 1 (lower is better)
Translates to: NFVLEHSRQGAPSGL*QQMSRQKSGIQFQY
Trigger: ATACTGGAACTGAATTCCACTTTTCTGCCTGCTCATTTGCTGCCAAAGACCACTTGGGGCTCCTTGTCTAGAATGCTCTAAGACGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 90 bp AGAGGGAATACAGTGCACTTATTACCTACAGAACTTTCTCCTCTCTaGATCCCAGCTATAAGGTTATTCATCTGCATGTTCTCAGCAAGG +
Preference number: 1 (lower is better)
Translates to: RGNTVHLLPTELSPL*IPAIRLFICMFSAR
Trigger: CCTTGCTGAGAACATGCAGATGAATAACCTTATAGCTGGGATGCAGAGAGGAGAAAGTTCTGTAGGTAATAAGTGCACTGTATTCCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 90 bp CAGGATTCCAATTCAACTGGGTGGGTGGCATGGCATAGCATTTCATaGCAAAGATGCTTTTTCCTGGTTCATTTTCTTTCTTCCAATGAG +
Preference number: 1 (lower is better)
Translates to: QDSNSTGWVAWHSIS*QRCFFLVHFLSSNE
Trigger: CTCATTGGAAGAAAGAAAATGAACCAGGAAAAAGCATCTTTGTCATGAAATGCTATGCCATGCCACCCACCCAGTTGAATTGGAATCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 90 bp CAAATACCAGGAGTGGCCTCCTGTGGAGGATGTGCTCTTCTGAAATaGCGAACAATTCCTTATAAAGCTCTGAATAAGATGAAGTCAAAA +
Preference number: 1 (lower is better)
Translates to: QIPGVASCGGCALLK*RTIPYKALNKMKSK
Trigger: TTTTGACTTCATCTTATTCAGAGCTTTATAAGGAATTGTTCGTCATTTCAGAAGAGCACATCCTCCACAGGAGGCCACTCCTGGTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR TCA 90 bp TCACATGGGAGATCTCAACACTGCCAAGCTCAATGGCCCAGAGACTaGAATTCTTCTAACTGGGAATTGATTACAAAACTCATTATTCAT +
Preference number: 1 (lower is better)
Translates to: SHGRSQHCQAQWPRD*NSSNWELITKLIIH
Trigger: ATGAATAATGAGTTTTGTAATCAATTCCCAGTTAGAAGAATTTCAGTCTCTGGGCCATTGAGCTTGGCAGTGTTGAGATCTCCCATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACATGCCCTCCTCCATGCTaGGGAAGGACGCAGGAACCA +
Preference number: 2 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTCPPPC*GRTQEP
Trigger: TGGTTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCA...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR CCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCACAGTCAGTGAGCCTTaGTGGCCCAGATGTCAGGCT +
Preference number: 2 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVTVSEP*WPRCQA
Trigger: AGCCTGACATCTGGGCCACCAAGGCTCACTGACTGT...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCACACTCAGACCCACATaGAGTCAACCCCATCATGCC +
Preference number: 2 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVTLRPT*SQPHHA
Trigger: GGCATGATGGGGTTGACTTCATGTGGGTCTGAGTGT...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGCCATCACTGTGCCCCTaGAGTTCCCAATGCATAGCC +
Preference number: 2 (lower is better)
Translates to: MIWELAITWGTSLPLTAAPSLCP*SSQCIA
Trigger: GGCTATGCATTGGGAACTGCAGGGGCACAGTGATGG...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR CCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAGAAAGGCTGGAGGGGTaGGCTGCTAGCTCCTGTCTT +
Preference number: 2 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTERLEG*AASSCL
Trigger: AAGACAGGAGCTAGCAGCCCACCCCTCCAGCCTTTC...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR GCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACACAACCCCATCATGCCTaGCCAATCAGGGGCAGTTAC +
Preference number: 2 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTQPHHA*PIRGSY
Trigger: GTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTG...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR CCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGATGCCCTCCTCCATGCTaGGGAAGGACGCAGGAACCA +
Preference number: 2 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERCPPPC*GRTQEP
Trigger: TGGTTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCA...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGCTATCCCAGGAAACCTaGTGTTCCAGGACCTCAGTA +
Preference number: 2 (lower is better)
Translates to: STVAGWVPRKQILRWRMALSQET*CSRTSV
Trigger: TACTGAGGTCCTGGAACATCAGGTTTCCTGGGATAG...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCGTCTTTGGCAGCAAATaGGCAGGCAGAAAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVVFGSK*AGRKVE
Trigger: TTCCACTTTTCTGCCTGCTCATTTGCTGCCAAAGAC...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCAACCCACTCGTTTCTTaGAGAAGGCTCTACAGAAGG +
Preference number: 2 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVNPLVS*RRLYRR
Trigger: CCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGTT...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCCTCCATGGGCCTTGCTaGACTGTCATATTTGTGATG +
Preference number: 2 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVLHGPC*TVIFVM
Trigger: CATCACAAATATGACAGTCCAGCAAGGCCCATGGAG...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGACAACCCCATCATGCCTaGCCAATCAGGGGCAGTTAC +
Preference number: 2 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERQPHHA*PIRGSY
Trigger: GTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTG...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGCCCTGCAGTTCCCAATaGATAGCCCGTAAATGTTCA +
Preference number: 2 (lower is better)
Translates to: MIWELAITWGTSLPLTAAPCSSQ*IARKCS
Trigger: TGAACATTTACGGGCTATGCATTGGGAACTGCAGGG...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR GCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGACCTGGGGAACCTCTCTaGCACTCACAGCAGCGTTTT +
Preference number: 2 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERPGEPL*HSQQRF
Trigger: AAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGG...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp CCAGACACCAAATCTGCCGGCACCTTGATCTTGGACTTGCCAGCCTCCTGGGCAAAAGGGTCCAGGAGTTaGAGCTTCTCTTGTTCTTTC +
Preference number: 2 (lower is better)
Translates to: PDTKSAGTLILDLPASWAKGSRS*SFSCSF
Trigger: GAAAGAACAAGAGAAGCTGCAACTCCTGGACCCTTT...TGCCCAGGAGGCTGGCAAGTCCAAGATCAAGGTGCCGGCAGATTTGGTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR GCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCTCCTGCCCTCCTCCATaGTGGGGAAGGACGCAGGAA +
Preference number: 2 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLASCPPP*WGRTQE
Trigger: TTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCAGGA...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCACGAAATCAGCCTTCTaGAAGCAGCTAATCTTTGCC +
Preference number: 2 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVTKSAF*KQLIFA
Trigger: GGCAAAGATTAGCTGCTTCCAGAAGGCTGATTTCGT...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGAGCCTTAGTACCAAATaGTTTGGGAACTGGCCATCA +
Preference number: 2 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKSLSTK*FGNWPS
Trigger: TGATGGCCAGTTCCCAAATCATTTGGTACTAAGGCT...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp CCAGACACCAAATCTGCCGGCACCTTGATCTTGGACTTGCCAGCCTCCTGGGCAAGGCTGTGTTCTATTTaGTGTGATGTGCCAGAATGT +
Preference number: 2 (lower is better)
Translates to: PDTKSAGTLILDLPASWARLCSI*CDVPEC
Trigger: ACATTCTGGCACATCACATCAAATAGAACACAGCCT...TGCCCAGGAGGCTGGCAAGTCCAAGATCAAGGTGCCGGCAGATTTGGTGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR TCA 90 bp GCCTTAGGAAGTAGGTTGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACTGGGGACTCAGCATCTCTGTaGACCTGCATCTGTTCCAAT +
Preference number: 2 (lower is better)
Translates to: ALGSRLGSGLCGTGFQTGDSASL*TCICSN
Trigger: ATTGGAACAGATGCAGGTTCACAGAGATGCTGAGTC...CCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCTACTTCCTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR-3UTR GCA 90 bp CCCATTAAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTCCTGCCCTCCTCCATaGTGGGGAAGGACGCAGGAA +
Preference number: 2 (lower is better)
Translates to: PIKCQPPIHPDGENTTNVSCPPP*WGRTQE
Trigger: TTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCAGGA...AACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTTAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR GCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGAACTCATTAAGTTTCTaGCATCTGGCAAGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKNSLSF*HLARSP
Trigger: TGGGCTCCTTGCCAGATGGCAGAAACTTAATGAGTT...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGGGTTTAACAAGCTCCTaGGAGACCTACCACAAATGT +
Preference number: 2 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKGLTSS*ETYHKC
Trigger: ACATTTGTGGTAGGTCTCCCAGGAGCTTGTTAAACC...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCAATCTAAGAGAAGGCTaGACATGGCTAAGTTGTGGT +
Preference number: 2 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVNLREG*TWLSCG
Trigger: ACCACAACTTAGCCATGTCCAGCCTTCTCTTAGATT...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAGAACCGTTTCAAGCTTaGCCTGCTAGAATACAGACA +
Preference number: 2 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTEPFQA*PARIQT
Trigger: TGTCTGTATTCTAGCAGGTCAAGCTTGAAACGGTTC...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR TCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCGTGCCAGATCCCAGTTaGGTCATGATAGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLAVPDPS*VMIGWA
Trigger: TGCCCAGCCTATCATGACTCAACTGGGATCTGGCAC...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp CTCGCATCTCCTTCCTTTCCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGATCTCAACTCTGGGATaGTTGCACCAGTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LASPSFPFSTPAKPAVTQISTLG*LHQSSS
Trigger: GCTGGAGGACTGGTGCAATCATCCCAGAGTTGAGAT...CTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGAAAGGAAGGAGATGCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR-3UTR GCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCCTTTGCCCATCACTGTaGCCCTGCAGTTCCCAATGC +
Preference number: 2 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLALCPSL*PCSSQC
Trigger: GCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAG...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGAAAGAAAATCAGCTGTaGAAGTCCCTTCCAAAGGGA +
Preference number: 2 (lower is better)
Translates to: STVAGWVPRKQILRWRMAKENQL*KSLPKG
Trigger: TCCCTTTGGAAGGGACTTGCACAGCTGATTTTCTTT...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAACGAAATCAGCCTTCTaGAAGCAGCTAATCTTTGCC +
Preference number: 2 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTTKSAF*KQLIFA
Trigger: GGCAAAGATTAGCTGCTTCCAGAAGGCTGATTTCGT...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR CCA 90 bp CCCATTAAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTGAACTGGCCATCACCTaGGGAACCTCTCTGCCACTC +
Preference number: 2 (lower is better)
Translates to: PIKCQPPIHPDGENTTNVELAIT*GTSLPL
Trigger: GAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTC...AACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTTAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR CAA 90 bp CAGGCCTCACCAGACACCAAATCTGCCGGCACCTTGATCTTGGACTaGCCAGCCTCCTGGGCAGTGAGAAGTAAATTTCTGTTGTTTATA +
Preference number: 2 (lower is better)
Translates to: QASPDTKSAGTLILD*PASWAVRSKFLLFI
Trigger: TATAAACAACAGAAATTTACTTCTCACTGCCCAGGAGGCTGGCAAGTCCAAGATCAAGGTGCCGGCAGATTTGGTGTCTGGTGAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR GCA 90 bp TGCAGTTCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTAAGTCAACCCCATCATaGCTGCCCAATCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: CSSQCIARKCSGNVPWRSKSTPS*LPNQGQ
Trigger: CTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTT...ACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR GCA 90 bp GCATCTGTTCCAATAAGCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTCAACTCTGGGATGATTaGACCAGTCCTCCAGCCATG +
Preference number: 2 (lower is better)
Translates to: ASVPISQSRSAARSWFECQLWDD*TSPPAM
Trigger: CATGGCTGGAGGACTGGTGCAATCATCCCAGAGTTG...ACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR-3UTR CCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGCTACCACAAATGTTTTaGTTCTTCAAACCCACTCGT +
Preference number: 2 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKLPQMF*FFKPTR
Trigger: ACGAGTGGGTTTGAAGAACCAAAACATTTGTGGTAG...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCGACACCGAGCAGTTCTaGGCGCAACACACACCCATT +
Preference number: 2 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGDTEQF*AQHTPI
Trigger: AATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp GAAGTAGGTTGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTGAATCTGCAGCCAGGTCATaGTTTGAATGTATTGCTCCG +
Preference number: 2 (lower is better)
Translates to: EVGWVLVCAEQASKLGIESAARS*FECIAP
Trigger: CGGAGCAATACATTCAAACCATGACCTGGCTGCAGA...TTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCTACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR CAA 90 bp TTTGATGTGATGTGCCAGAATGTCAAAGCCTTAGTACCAAATGATTaGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGC +
Preference number: 2 (lower is better)
Translates to: FDVMCQNVKALVPND*GTGHHLGNLSATHS
Trigger: GCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCATTTGGTACTAAGGCTTTGACATTCTGGCACATCACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR CAA 90 bp CCCAGCTATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTaGCCATTGCCGCCAACACAATCCATTAGAGCAGGGGCTAGCAAG +
Preference number: 2 (lower is better)
Translates to: PSYKVIHLHVLSKGI*PLPPTQSIRAGASK
Trigger: CTTGCTAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTAAGTCAACCCCATCATaGCTGCCCAATCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVKSTPS*LPNQGQ
Trigger: CTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTT...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR GCA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGATAGCACTCAGAGAGTaGAGTAAATATGCACTTTAC +
Preference number: 2 (lower is better)
Translates to: STVAGWVPRKQILRWRMAIALRE*SKYALY
Trigger: GTAAAGTGCATATTTACTGCACTCTCTGAGTGCTAT...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAATCTTCCTCCTCCCCTaGCCAATCCAAGCACCTCTC +
Preference number: 2 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPIFLLP*PIQAPL
Trigger: GAGAGGTGCTTGGATTGGCCAGGGGAGGAGGAAGAT...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCACAAGGAGCCCCAAGTaGTCTTTGGCAGCAAATGAG +
Preference number: 2 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLATRSPK*SLAANE
Trigger: CTCATTTGCTGCCAAAGACCACTTGGGGCTCCTTGT...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CAA 90 bp GGAGACCTACCACAAATGTTTTGGTTCTTCAAACCCACTCGTTTCTaGCAGAAGGCTCTACAGAAGGCTGTTCCACTAGCTGGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: GDLPQMFWFFKPTRF*QKALQKAVPLAGRF
Trigger: AAACCTGCCAGCTAGTGGAACAGCCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGTTTGAAGAACCAAAACATTTGTGGTAGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CAA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATaGCCGCCAACACAATCCATTAGAGCAGGGGCTAGCAAGCCACAG +
Preference number: 2 (lower is better)
Translates to: YKVIHLHVLSKGILP*PPTQSIRAGASKPQ
Trigger: CTGTGGCTTGCTAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTACACTCAGACCCACATaGAGTCAACCCCATCATGCC +
Preference number: 2 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVTLRPT*SQPHHA
Trigger: GGCATGATGGGGTTGACTTCATGTGGGTCTGAGTGT...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR GCA 90 bp ATGCAGGTGCAATTAAGGATTCTTCCCTCCAACAAAAGGAATACATGCCACTTGCCATCACTGTGCCCCTaGAGTTCCCAATGCATAGCC +
Preference number: 2 (lower is better)
Translates to: MQVQLRILPSNKRNTCHLPSLCP*SSQCIA
Trigger: GGCTATGCATTGGGAACTGCAGGGGCACAGTGATGG...CAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGAAGAACATACTACTGTaGCTTACTGTGTTCATAACA +
Preference number: 2 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKKNILL*LTVFIT
Trigger: TGTTATGAACACAGTAAGGCACAGTAGTATGTTCTT...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGATGCATTCATCAATGTaGACATCAGAGAACAAAACA +
Preference number: 2 (lower is better)
Translates to: STVAGWVPRKQILRWRMAMHSSM*TSENKT
Trigger: TGTTTTGTTCTCTGATGTGCACATTGATGAATGCAT...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp CCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGCATCTCTGTGAACCTGCACCAGTCCTCCAGCCATaGTTTAGGGTCAAATCTTTT +
Preference number: 2 (lower is better)
Translates to: PFSTPAKPAVTQHLCEPAPVLQP*FRVKSF
Trigger: AAAAGATTTGACCCTAAAGCATGGCTGGAGGACTGG...TGCAGGTTCACAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR-3UTR CCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCTCCAATTCAACTGGGTaGGTGGCATGGCATAGCATT +
Preference number: 2 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLASNSTG*VAWHSI
Trigger: AATGCTATGCCATGCCACCCACCCAGTTGAATTGGA...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCCAGGCTTCTGTCACATaGGAGATCTCAACACTGCCA +
Preference number: 2 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGQASVT*EISTLP
Trigger: TGGCAGTGTTGAGATCTCCCATGTGACAGAAGCCTG...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp TCCTTCCTTTCCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGCATCTCTGCTCAGATCTCAACTCTaGGATGATTGCACCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SFLSFFHSCKTSCDSASLLRSQL*DDCTSP
Trigger: AGGACTGGTGCAATCATCCCAGAGTTGAGATCTGAG...CAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGAAAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR CAA 90 bp GCGAAAACACCACAAATGTTTTGGTTCTTCAAACCCACTCGTTTCTaGCAGAAGGCTCTACAGAAGGCTGTTCCACTAGCTGGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: AKTPQMFWFFKPTRF*QKALQKAVPLAGRF
Trigger: AAACCTGCCAGCTAGTGGAACAGCCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGTTTGAAGAACCAAAACATTTGTGGTGTTTTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR TCA 90 bp CTCGCATCTCCTTCCTTTCCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGTTTGGCCCCAGCCTTTaGTCATTTCATTCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: LASPSFPFSTPAKPAVTQFGPSL*SFHSKK
Trigger: TTTCTTGGAATGAAATGATCAAAGGCTGGGGCCAAA...CTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGAAAGGAAGGAGATGCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR-3UTR GCA 90 bp CCCATTAAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTAACCCACTCGTTTCTTaGAGAAGGCTCTACAGAAGG +
Preference number: 2 (lower is better)
Translates to: PIKCQPPIHPDGENTTNVNPLVS*RRLYRR
Trigger: CCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGTT...AACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTTAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR CCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCAGCGTTTTACCATTGTaGAGCCCACGAAATCAGCCT +
Preference number: 2 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGSVLPL*SPRNQP
Trigger: AGGCTGATTTCGTGGGCTCCACAATGGTAAAACGCT...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATGGCTGTTCCACTAGCTaGCAGGTTTTGACCAGAGCT +
Preference number: 2 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHGCSTS*QVLTRA
Trigger: AGCTCTGGTCAAAACCTGCCAGCTAGTGGAACAGCC...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGGACATGGCTAAGTTGTaGTGGCCATCTTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLDMAKL*WPSSSS
Trigger: GGAGGAGGAAGATGGCCACCACAACTTAGCCATGTC...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAGAAGCAGCTAATCTTTaGCCATCACTGTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: LHKLPNSRTNITGVKSKREAANL*PSLCPC
Trigger: GCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTC...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCCTCCCCTCATGTTCCTaGCATCCTTTAGATTTAAGA +
Preference number: 2 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLALPSCS*HPLDLR
Trigger: TCTTAAATCTAAAGGATGGCAGGAACATGAGGGGAG...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAATGGCTAAGTTGTGGTaGCCATCTTCCTCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRMAKLW*PSSSSP
Trigger: AGGGGAGGAGGAAGATGGCCACCACAACTTAGCCAT...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGTTTGGAAGGCTGAGGTaGGCAGAACACTTGAGGCTA +
Preference number: 2 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQFGRLR*AEHLRL
Trigger: TAGCCTCAAGTGTTCTGCCCACCTCAGCCTTCCAAA...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCTGGCATAGCATTTCATaGCAAAGATGCTTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLAWHSIS*QRCFFL
Trigger: CAGGAAAAAGCATCTTTGTCATGAAATGCTATGCCA...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCGGAATACATGCCACTTaGATTGCCCCTAGAAAGAAA +
Preference number: 2 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGGIHAT*IAPRKK
Trigger: TTTCTTTCTAGGGGCAATGCAAGTGGCATGTATTCC...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR GCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCTCAGAGGGAATACAGTaGACTTATTACCTACAGAAC +
Preference number: 2 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLASEGIQ*TYYLQN
Trigger: GTTCTGTAGGTAATAAGTGCACTGTATTCCCTCTGA...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTGCTAGAATACAGACATaGCATCAAGTGGTCTCACCT +
Preference number: 2 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVARIQT*HQVVSP
Trigger: AGGTGAGACCACTTGATGCCATGTCTGTATTCTAGC...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR CCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGATTCAACTGGGTGGGTaGCATGGCATAGCATTTCAT +
Preference number: 2 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLIQLGG*HGIAFH
Trigger: ATGAAATGCTATGCCATGCCACCCACCCAGTTGAAT...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR TCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAGAACCGTTTCAAGCTTaGCCTGCTAGAATACAGACA +
Preference number: 2 (lower is better)
Translates to: LHKLPNSRTNITGVKSKREPFQA*PARIQT
Trigger: TGTCTGTATTCTAGCAGGTCAAGCTTGAAACGGTTC...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATTCAGGAAATGTTCCATaGAGGAGTCAAGAACCGTTT +
Preference number: 2 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHSGNVP*RSQEPF
Trigger: AAACGGTTCTTGACTCCTCCATGGAACATTTCCTGA...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CCA 90 bp GTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATGGAAATGACCAGTAGGAGTGGCCTCCTGTaGAGGATGTGCTCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: VSTVLHTCVYIIFMEMTSRSGLL*RMCSSE
Trigger: TTCAGAAGAGCACATCCTCCACAGGAGGCCACTCCT...ACTGGTCATTTCCATGAAGATTATATAGACACACGTATGTAAGACTGTACTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR GCA 90 bp GTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATGGAAATGACCAGTTGGTTTACATATAGCTaGATTCTTCCTGAATCTGCT +
Preference number: 2 (lower is better)
Translates to: VSTVLHTCVYIIFMEMTSWFTYS*ILPESA
Trigger: AGCAGATTCAGGAAGAATGCAGCTATATGTAAACCA...ACTGGTCATTTCCATGAAGATTATATAGACACACGTATGTAAGACTGTACTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR CCA 72 bp TCTGGAGCTGGGATGGCCCCAGAGGGTTTCCCAAGTTaGGGTGAGGAGGCCAGCCCTTTGTACCCCATATGG +
Preference number: 3 (lower is better)
Translates to: SGAGMAPEGFPS*GEEASPLYPIW
Trigger: CCATATGGGGTACAAAGGGCTGGCCTCCTCACCCCAACTTGGGAAACCCTCTGGGGCCATCCCAGCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 72 bp GTCAGGGAGAGGCACTGGGCTGTAATGTGGCCACAATaGGGTCTCACTGACCCCACAAGGGGCTCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: VRERHWAVMWPQ*GLTDPTRGSGA
Trigger: AGCTCCAGAGCCCCTTGTGGGGTCAGTGAGACCTCATTGTGGCCACATTACAGCCCAGTGCCTCTCCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 72 bp GGTGGAGAATGGCGTGCAGGAAGGTTCATAGGACAGTaGTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCA +
Preference number: 3 (lower is better)
Translates to: GGEWRAGRFIGQ*CGLSRLGTGLS
Trigger: TGACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCTGCACGCCATTCTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCGCTGAGGCACGAAAATaGCTTGAACCTGGGAGGCAA +
Preference number: 3 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVAEARK*LEPGRQ
Trigger: TTGCCTCCCAGGTTCAAGCAATTTTCGTGCCTCAGC...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 72 bp GGAATGACTGTGTTCGGCCCCGTTACCGCCACGACATaGGTCTACAGTCTGCAAGGTACACAGTCAGTGAGC +
Preference number: 3 (lower is better)
Translates to: GMTVFGPVTATT*VYSLQGTQSVS
Trigger: GCTCACTGACTGTGTACCTTGCAGACTGTAGACCCATGTCGTGGCGGTAACGGGGCCGAACACAGTCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 72 bp ATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATaGCTGTGTTCGGCCCCGTTACCGCCACGACATGGG +
Preference number: 3 (lower is better)
Translates to: IKWDVPPSFTWE*LCSAPLPPRHG
Trigger: CCCATGTCGTGGCGGTAACGGGGCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 72 bp GTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGTaGAGGAAGGTTCATAGGACAGTGCTGTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: VPRKQILRWRMA*RKVHRTVLWAE
Trigger: CTCAGCCCACAGCACTGTCCTATGAACCTTCCTGCACGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 72 bp GGTCTACAGTCTGCAAGGTACACAGTCAGTGAGCCTTaGTGGCCCAGATGTCAGGCTTCTGTCACATGGGAG +
Preference number: 3 (lower is better)
Translates to: GLQSARYTVSEP*WPRCQASVTWE
Trigger: CTCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTGTGTACCTTGCAGACTGTAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 72 bp GTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTaGAGAATGGCGTGCAGGAAGGTTCATAGGACAGTG +
Preference number: 3 (lower is better)
Translates to: VAGWVPRKQILR*RMACRKVHRTV
Trigger: CACTGTCCTATGAACCTTCCTGCACGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCAGCCCACAGCTTGTCTaGGTAAATCAAGTTGTGCTG +
Preference number: 3 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVSPQLV*VNQVVL
Trigger: CAGCACAACTTGATTTACCAAGACAAGCTGTGGGCT...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 72 bp CTACAGTCTGCAAGGTACACAGTCAGTGAGCCTTGGTaGCCCAGATGTCAGGCTTCTGTCACATGGGAGATC +
Preference number: 3 (lower is better)
Translates to: LQSARYTVSEPW*PRCQASVTWEI
Trigger: GATCTCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTGTGTACCTTGCAGACTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAAGCAGCGTTTTACCATaGTGGAGCCCACGAAATCAG +
Preference number: 3 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTSSVLP*WSPRNQ
Trigger: CTGATTTCGTGGGCTCCACAATGGTAAAACGCTGCT...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR TCA 72 bp GGGACCTCCATGGGCCTTGCTGGACTGTCATATTTGTaGTGGCTGCTGCCCTGGACTCATCATTGTTCACAT +
Preference number: 3 (lower is better)
Translates to: GTSMGLAGLSYL*WLLPWTHHCSH
Trigger: ATGTGAACAATGATGAGTCCAGGGCAGCAGCCATCACAAATATGACAGTCCAGCAAGGCCCATGGAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 72 bp CTTGCAGAAGGCTCTACAGAAGGCTGTTCCACTAGCTaGCAGGTTTTGACCAGAGCTCTCATCTCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: LAEGSTEGCSTS*QVLTRALISSL
Trigger: GAGAGAGGAGATGAGAGCTCTGGTCAAAACCTGCCAGCTAGTGGAACAGCCTTCTGTAGAGCCTTCTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR CCA 72 bp AATCAGCTGTGCAAGTCCCTTCCAAAGGGACCTCCATaGGCCTTGCTGGACTGTCATATTTGTGATGGCTGC +
Preference number: 3 (lower is better)
Translates to: NQLCKSLPKGPP*ALLDCHICDGC
Trigger: GCAGCCATCACAAATATGACAGTCCAGCAAGGCCCATGGAGGTCCCTTTGGAAGGGACTTGCACAGCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 72 bp GTATGTCCTTCAGTCTGGAAAGGTCATCCGGGCAGCTaGGCTCAGCACCCAGCACTAGCACAATTACAAACT +
Preference number: 3 (lower is better)
Translates to: VCPSVWKGHPGS*AQHPALAQLQT
Trigger: AGTTTGTAATTGTGCTAGTGCTGGGTGCTGAGCTCAGCTGCCCGGATGACCTTTCCAGACTGAAGGACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 72 bp CTGGAAGCAGCTAATCTTTGCCCATCACTGTGCCCCTaGAGTTCCCAATGCATAGCCCGTAAATGTTCAGGA +
Preference number: 3 (lower is better)
Translates to: LEAANLCPSLCP*SSQCIARKCSG
Trigger: TCCTGAACATTTACGGGCTATGCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR GCA 72 bp AGCCTTCTGGAAGCAGCTAATCTTTGCCCATCACTGTaGCCCTGCAGTTCCCAATGCATAGCCCGTAAATGT +
Preference number: 3 (lower is better)
Translates to: SLLEAANLCPSL*PCSSQCIARKC
Trigger: ACATTTACGGGCTATGCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTCCAGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR-3UTR CAA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCACTAGCTGGCAGGTTTaGACCAGAGCTCTCATCTCC +
Preference number: 3 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLATSWQV*TRALIS
Trigger: GGAGATGAGAGCTCTGGTCAAAACCTGCCAGCTAGT...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATACCTACCACAAATGTTTaGGTTCTTCAAACCCACTCG +
Preference number: 3 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIPTTNV*VLQTHS
Trigger: CGAGTGGGTTTGAAGAACCAAAACATTTGTGGTAGG...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 72 bp TCTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTaGAGAAACTCTTGGTCATTTCTCGCATCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: SGLCGTGFQTGH*RNSWSFLASPS
Trigger: GGAAGGAGATGCGAGAAATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR GCA 72 bp AGCAACACTCAGACCCACATGAAGTCAACCCCATCATaGCTGCCCAATCAGGGGCAGTTACAGTTTCTAGTT +
Preference number: 3 (lower is better)
Translates to: SNTQTHMKSTPS*LPNQGQLQFLV
Trigger: AACTAGAAACTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGAGTGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR GCA 72 bp TTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTaGCGCCAACACAATCCATTAGAGCAGGGGCTAGCA +
Preference number: 3 (lower is better)
Translates to: FICMFSARESCH*RQHNPLEQGLA
Trigger: TGCTAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 72 bp GTTGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACTaGGCATTGAAGAAACTCTTGGTCATTTCTCGCATC +
Preference number: 3 (lower is better)
Translates to: VGFWSVRNRLPN*ALKKLLVISRI
Trigger: GATGCGAGAAATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR-3UTR CAA 90 bp CTCGCATCTCCTTCCTTTCCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGCAGCCAGGTCATGGTTaGAATGTATTGCTCCGTGTT +
Preference number: 3 (lower is better)
Translates to: LASPSFPFSTPAKPAVTQQPGHG*NVLLRV
Trigger: AACACGGAGCAATACATTCAAACCATGACCTGGCTG...CTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGAAAGGAAGGAGATGCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR GCA 72 bp AGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTaGCATTGCCGCCAACACAATCCATTAGAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: RLFICMFSARES*HCRQHNPLEQG
Trigger: CCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGCTGGACATGGCTAAGTaGTGGTGGCCATCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQLDMAK*WWPSSS
Trigger: GGAGGAAGATGGCCACCACAACTTAGCCATGTCCAG...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp GAAGTAGGTTGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTGAAATTTGGCCCCAGCCTTaGATCATTTCATTCCAAGAA +
Preference number: 3 (lower is better)
Translates to: EVGWVLVCAEQASKLGIEIWPQP*IISFQE
Trigger: TTCTTGGAATGAAATGATCAAAGGCTGGGGCCAAAT...TTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCTACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR-3UTR CAA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAAGCAGCGTTTTACCATaGTGGAGCCCACGAAATCAG +
Preference number: 3 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPSSVLP*WSPRNQ
Trigger: CTGATTTCGTGGGCTCCACAATGGTAAAACGCTGCT...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGAGGCACGAAAATTGCTaGAACCTGGGAGGCAAGAGG +
Preference number: 3 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQRHENC*NLGGKR
Trigger: CCTCTTGCCTCCCAGGTTCAAGCAATTTTCGTGCCT...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 72 bp CTAGACAAGGAGCCCCAAGTGGTCTTTGGCAGCAAATaGGCAGGCAGAAAAGTGGAATTCAGTTCCAGTATT +
Preference number: 3 (lower is better)
Translates to: LDKEPQVVFGSK*AGRKVEFSSSI
Trigger: AATACTGGAACTGAATTCCACTTTTCTGCCTGCTCATTTGCTGCCAAAGACCACTTGGGGCTCCTTGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 72 bp CCATGGGCCTTGCTGGACTGTCATATTTGTGATGGCTaGTGCCCTGGACTCATCATTGTTCACATAATTCTT +
Preference number: 3 (lower is better)
Translates to: PWALLDCHICDG*CPGLIIVHIIL
Trigger: AAGAATTATGTGAACAATGATGAGTCCAGGGCAGCAGCCATCACAAATATGACAGTCCAGCAAGGCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 72 bp CATGGCATCAAGTGGTCTCACCTATCCCAGGAAACCTaGTGTTCCAGGACCTCAGTAAACAAAAAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: HGIKWSHLSQET*CSRTSVNKKAK
Trigger: TTTTGCCTTTTTGTTTACTGAGGTCCTGGAACATCAGGTTTCCTGGGATAGGTGAGACCACTTGATGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR TCA 72 bp AATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTaGCCTGCTAGAATACAGACATGGCATCAAGTGGTC +
Preference number: 3 (lower is better)
Translates to: NVPWRSQEPFQA*PARIQTWHQVV
Trigger: GACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR GCA 72 bp TGGGCCTTGCTGGACTGTCATATTTGTGATGGCTGCTaGCCTGGACTCATCATTGTTCACATAATTCTTAGA +
Preference number: 3 (lower is better)
Translates to: WALLDCHICDGC*PGLIIVHIILR
Trigger: TCTAAGAATTATGTGAACAATGATGAGTCCAGGGCAGCAGCCATCACAAATATGACAGTCCAGCAAGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CCA 72 bp CCAACTCAGGTGGTGTTTCCAGGTTTAACAAGCTCCTaGGAGACCTACCACAAATGTTTTGGTTCTTCAAAC +
Preference number: 3 (lower is better)
Translates to: PTQVVFPGLTSS*ETYHKCFGSSN
Trigger: GTTTGAAGAACCAAAACATTTGTGGTAGGTCTCCCAGGAGCTTGTTAAACCTGGAAACACCACCTGAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTTTAGTACCAAATGATTaGGGAACTGGCCATCACCTG +
Preference number: 3 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVLVPND*GTGHHL
Trigger: CAGGTGATGGCCAGTTCCCAAATCATTTGGTACTAA...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR CAA 90 bp CCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGCATCTCTGTGAACCTGCACATGGTTTGAATGTATaGCTCCGTGTTCATGATTTT +
Preference number: 3 (lower is better)
Translates to: PFSTPAKPAVTQHLCEPAHGLNV*LRVHDF
Trigger: AAAATCATGAACACGGAGCAATACATTCAAACCATG...TGCAGGTTCACAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR TCA 72 bp GGAGTGGCCTCCTGTGGAGGATGTGCTCTTCTGAAATaGCGAACAATTCCTTATAAAGCTCTGAATAAGATG +
Preference number: 3 (lower is better)
Translates to: GVASCGGCALLK*RTIPYKALNKM
Trigger: CATCTTATTCAGAGCTTTATAAGGAATTGTTCGTCATTTCAGAAGAGCACATCCTCCACAGGAGGCCACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR-3UTR CAA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGTTAGTACCAAATGATTaGGGAACTGGCCATCACCTG +
Preference number: 3 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLLVPND*GTGHHL
Trigger: CAGGTGATGGCCAGTTCCCAAATCATTTGGTACTAA...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 72 bp ATAATCTTCATGGAAATGACCAGTAGAAATGCAGACTaGCACGGGTGTGATTCACGACTCAAATACCAGGAG +
Preference number: 3 (lower is better)
Translates to: IIFMEMTSRNAD*HGCDSRLKYQE
Trigger: CTCCTGGTATTTGAGTCGTGAATCACACCCGTGTCAGTCTGCATTTCTACTGGTCATTTCCATGAAGATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR GCA 72 bp TCCTTCCAGGGAGGCTGTGTTCTATTTGATGTGATGTaGCAGAATGTCAAAGCCTTAGTACCAAATGATTTG +
Preference number: 3 (lower is better)
Translates to: SFQGGCVLFDVM*QNVKALVPNDL
Trigger: CAAATCATTTGGTACTAAGGCTTTGACATTCTGGCACATCACATCAAATAGAACACAGCCTCCCTGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR CCA 72 bp CTGCCATCTGGCAAGGAGCCCATGGAATGCCAGACTTaGATTTCATCAATAGATGGTTACATACATTTATCA +
Preference number: 3 (lower is better)
Translates to: LPSGKEPMECQT*ISSIDGYIHLS
Trigger: TGATAAATGTATGTAACCATCTATTGATGAAATCCAAGTCTGGCATTCCATGGGCTCCTTGCCAGATGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR TCA 72 bp AGATCTCAACACTGCCAAGCTCAATGGCCCAGAGACTaGAATTCTTCTAACTGGGAATTGATTACAAAACTC +
Preference number: 3 (lower is better)
Translates to: RSQHCQAQWPRD*NSSNWELITKL
Trigger: GAGTTTTGTAATCAATTCCCAGTTAGAAGAATTTCAGTCTCTGGGCCATTGAGCTTGGCAGTGTTGAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 72 bp ATTAAGTTTCTGCCATCTGGCAAGGAGCCCATGGAATaGCAGACTTGGATTTCATCAATAGATGGTTACATA +
Preference number: 3 (lower is better)
Translates to: IKFLPSGKEPME*QTWISSIDGYI
Trigger: TATGTAACCATCTATTGATGAAATCCAAGTCTGGCATTCCATGGGCTCCTTGCCAGATGGCAGAAACTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 72 bp ATTCATTTCCCTTGTACCAATATGCATTCATCAATGTaGACATCAGAGAACAAAACACCCAGTGCAGTGTGC +
Preference number: 3 (lower is better)
Translates to: IHFPCTNMHSSM*TSENKTPSAVC
Trigger: GCACACTGCACTGGGTGTTTTGTTCTCTGATGTGCACATTGATGAATGCATATTGGTACAAGGGAAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 72 bp ACAGTGCACTTATTACCTACAGAACTTTCTCCTCTCTaGATCCCAGCTATAAGGTTATTCATCTGCATGTTC +
Preference number: 3 (lower is better)
Translates to: TVHLLPTELSPL*IPAIRLFICMF
Trigger: GAACATGCAGATGAATAACCTTATAGCTGGGATGCAGAGAGGAGAAAGTTCTGTAGGTAATAAGTGCACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR-3UTR CAA 90 bp TCTGTTCCAATAAGCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTATTTTAATTAAAACCTATTaGGCCCCAGCCTTTGATCAT +
Preference number: 3 (lower is better)
Translates to: SVPISQSRSAARSWFECILIKTY*APAFDH
Trigger: ATGATCAAAGGCTGGGGCCAAATAGGTTTTAATTAA...AATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415849.1
3UTR CCA 72 bp TCATGTTTTAACAGGATTCCAATTCAACTGGGTGGGTaGCATGGCATAGCATTTCATGACAAAGATGCTTTT +
Preference number: 3 (lower is better)
Translates to: SCFNRIPIQLGG*HGIAFHDKDAF
Trigger: AAAAGCATCTTTGTCATGAAATGCTATGCCATGCCACCCACCCAGTTGAATTGGAATCCTGTTAAAACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR GCA 72 bp ATGGCTGAAAACAGATTCATTTCCCTTGTACCAATATaGATTCATCAATGTGCACATCAGAGAACAAAACAC +
Preference number: 3 (lower is better)
Translates to: MAENRFISLVPI*IHQCAHQRTKH
Trigger: GTGTTTTGTTCTCTGATGTGCACATTGATGAATGCATATTGGTACAAGGGAAATGAATCTGTTTTCAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGCCGCTGCCATGGTCATaGCTGCTGCCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKPLPWS*LLPAAA
Trigger: GGCGGCAGCAGGCAGCAGGCATGACCATGGCAGCGG...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGGCGGGCAGTTCGTGCTaGAGTGGAGTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: STVAGWVPRKQILRWRMAAGSSC*SGVLRG
Trigger: CCCCCGGAGGACTCCACTGCAGCACGAACTGCCCGC...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TCAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGCGGGCAGTTCGTGCTaGAGTGGAGTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SDPHEVNPIMPAQSGAVTAGSSC*SGVLRG
Trigger: CCCCCGGAGGACTCCACTGCAGCACGAACTGCCCGC...TGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp AAGCCAAGAACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCAGGCGGGCAGTTCGTaGTGCAGTGGAGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KPRTPAHSFRTPTPSSSGQAGSS*CSGVLR
Trigger: CCGGAGGACTCCACTGCAGCACGAACTGCCCGCCTG...CCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCGAAAGGCTGGAGGGGTaGGCTGCTAGCTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVERLEG*AASSCL
Trigger: AAGACAGGAGCTAGCAGCCCACCCCTCCAGCCTTTC...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGCATAGGACAGTGCTGTaGGCTGAGCCGGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAAHRTVL*AEPAGY
Trigger: GTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATG...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCCAGTTTGGCCAACACTaGGCGGGTCTGCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVQFGQH*AGLLSI
Trigger: TATGCTGAGCAGACCCGCGCAGTGTTGGCCAAACTG...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp CAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGTCCTGCCCTCCTCCATaGTGGGGAAGGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QTHMKSTPSCLPNQGQLQSCPPP*WGRTQE
Trigger: TTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCAGGA...CTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATAGAGGGGTTCCGAAGGTaGGGGGCCTTTCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIEGFRR*GAFLTR
Trigger: CCTGGTCAGAAAGGCCCCCCACCTTCGGAACCCCTC...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCGTCAGTGAGCCTTGGTaGCCCAGATGTCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVVSEPW*PRCQAS
Trigger: AGAAGCCTGACATCTGGGCCACCAAGGCTCACTGAC...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGTTTCCCAAGTTGGGGTaGGGAGGCCAGCCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKFPKLG*GGQPFV
Trigger: TACAAAGGGCTGGCCTCCTCACCCCAACTTGGGAAA...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp CAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGGGGGGAGGGGCATCCTaGAAGGGATTAGTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: QTHMKSTPSCLPNQGQLQGGGAS*KGLVPL
Trigger: TAAGGGCACTAATCCCTTTCAGGATGCCCCTCCCCC...CTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR GCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGCTTTGCCCATCACTGTaGCCCTGCAGTTCCCAATGC +
Preference number: 4 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKLCPSL*PCSSQC
Trigger: GCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAG...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGCTTTGCCCATCACTGTaGCCCTGCAGTTCCCAATGC +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAALCPSL*PCSSQC
Trigger: GCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAG...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGCCAAAGGGACCTCCATaGGCCTTGCTGGACTGTCAT +
Preference number: 4 (lower is better)
Translates to: STVAGWVPRKQILRWRMAPKGPP*ALLDCH
Trigger: ATGACAGTCCAGCAAGGCCCATGGAGGTCCCTTTGG...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CAA 72 bp AAACAGGCCTCACCAGACACCAAATCTGCCGGCACCTaGATCTTGGACTTGCCAGCCTCCTGGGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KQASPDTKSAGT*ILDLPASWAVR
Trigger: TCTCACTGCCCAGGAGGCTGGCAAGTCCAAGATCAAGGTGCCGGCAGATTTGGTGTCTGGTGAGGCCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR TCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGCATCAGGGACAACACTaGGGCCTCTGTAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKHQGQH*GLCRQF
Trigger: GAACTGTCTACAGAGGCCTCAGTGTTGTCCCTGATG...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGGGACTGTCATATTTGTaGTGGCTGCTGCCCTGGACT +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAAGLSYL*WLLPWT
Trigger: AGTCCAGGGCAGCAGCCATCACAAATATGACAGTCC...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCGAACCAATTCTTCTGTaGTTCTCTTCGCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVEPILL*FSSPPG
Trigger: ACCGGGAGGCGAAGAGAAGCACAGAAGAATTGGTTC...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp CAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGCCATCACTGTGCCCCTaGAGTTCCCAATGCATAGCC +
Preference number: 4 (lower is better)
Translates to: QTHMKSTPSCLPNQGQLQPSLCP*SSQCIA
Trigger: GGCTATGCATTGGGAACTGCAGGGGCACAGTGATGG...CTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATACAGTTCGTGCTGCAGTaGAGTCCTCCGGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIQFVLQ*SPPGVE
Trigger: TTCTACCCCCGGAGGACTCCACTGCAGCACGAACTG...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATAGAACTGGCCATCACCTaGGGAACCTCTCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIELAIT*GTSLPL
Trigger: GAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTC...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGACCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERPGGGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTCCAACCTCCGCCTCCTGG...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGAGGAGTGGCCTCCTGTaGAGGATGTGCTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAARSGLL*RMCSSE
Trigger: TTCAGAAGAGCACATCCTCCACAGGAGGCCACTCCT...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR CAA 72 bp GGGAACCTCTCTGCCACTCACAGCAGCGTTTTACCATaGTGGAGCCCACGAAATCAGCCTTCTGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GNLSATHSSVLP*WSPRNQPSGSS
Trigger: GCTGCTTCCAGAAGGCTGATTTCGTGGGCTCCACAATGGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
3UTR CAA 72 bp GCCTCACCAGACACCAAATCTGCCGGCACCTTGATCTaGGACTTGCCAGCCTCCTGGGCAGTGAGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: ASPDTKSAGTLI*DLPASWAVRSK
Trigger: TTTACTTCTCACTGCCCAGGAGGCTGGCAAGTCCAAGATCAAGGTGCCGGCAGATTTGGTGTCTGGTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR TCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCGGGAGAAGATGTCCATaGACTGCTTCATCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVGRRCP*TASSCF
Trigger: GAAACACGATGAAGCAGTTCATGGACATCTTCTCCC...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp CAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGGGTAGAAAGTGTGGCTaGCGTCATAGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QTHMKSTPSCLPNQGQLQGRKCG*RHSSGG
Trigger: GCCTCCTGAACTATGACGTCAGCCACACTTTCTACC...CTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGCTATCCCAGGAAACCTaGTGTTCCAGGACCTCAGTA +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAALSQET*CSRTSV
Trigger: TACTGAGGTCCTGGAACATCAGGTTTCCTGGGATAG...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp GGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGTTTTACCCTTCCAATGAGCAGATaGAACCAACTCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GNWPSPGEPLCHSQQRFTLPMSR*NQLRWC
Trigger: ACACCACCTGAGTTGGTTTCATCTGCTCATTGGAAG...GGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AAGCCAAGAACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCAACCCCATCATGCCTaGCCAATCAGGGGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: KPRTPAHSFRTPTPSSSGQPHHA*PIRGSY
Trigger: GTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTG...CCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp AAGCCAAGAACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGAAGTCAACCCCATCATaGCTGCCCAATCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KPRTPAHSFRTPTPSSSGKSTPS*LPNQGQ
Trigger: CTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTT...CCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGAAGTGAGCCAAGATCGTaGCATTGCACTCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERSEPRS*HCTPAW
Trigger: CCAGGCCGGAGTGCAATGGCACGATCTTGGCTCACT...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGAGGTGGAGAATGGCGTaGAGGAAGGTTCATAGGACA +
Preference number: 4 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKRWRMA*RKVHRT
Trigger: TGTCCTATGAACCTTCCTGCACGCCATTCTCCACCT...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TCAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACATGCTCCAAGGGCACGTaGGACCCCTCGTACATTTCA +
Preference number: 4 (lower is better)
Translates to: SDPHEVNPIMPAQSGAVTCSKGT*DPSYIS
Trigger: TGAAATGTACGAGGGGTCCCACGTGCCCTTGGAGCA...TGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATACATGATCAGCCAGTTTaGCCAACACTGCGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIHDQPV*PTLRGS
Trigger: AGACCCGCGCAGTGTTGGCCAAACTGGCTGATCATG...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGCTGGCAAGGAGCCCATaGAATGCCAGACTTGGATTT +
Preference number: 4 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKLARSP*NARLGF
Trigger: AAATCCAAGTCTGGCATTCCATGGGCTCCTTGCCAG...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp CTGGAGGGGTGGGCTGCTAGCTCCTGTCTTAACCATTGGGAGAATTATTCTCCGGACACCGAGCAGTTCTaGGCGCAACACACACCCATT +
Preference number: 4 (lower is better)
Translates to: LEGWAASSCLNHWENYSPDTEQF*AQHTPI
Trigger: AATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC...CGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGGACTCAGCATCTCTGTaGACCTGCATCTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAADSASL*TCICSN
Trigger: ATTGGAACAGATGCAGGTTCACAGAGATGCTGAGTC...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp TCAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACATTGAGGCTAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SDPHEVNPIMPAQSGAVTLRLGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTAGCCTCAA...TGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGGTCTTTGGCAGCAAATaGGCAGGCAGAAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKVFGSK*AGRKVE
Trigger: TTCCACTTTTCTGCCTGCTCATTTGCTGCCAAAGAC...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAGCCTCCAATACACCCTaGTGGCGAAAACACCACAAA +
Preference number: 4 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTASNTP*WRKHHK
Trigger: TTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGC...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR GCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGCATGGTCATGCCTGCTaGCTGCTGCCGCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLHGHAC*LLPPPP
Trigger: CGGCGGTGGCGGCAGCAGGCAGCAGGCATGACCATG...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACACTGAGGCACGAAAATTaGTTGAACCTGGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTLRHEN*LNLGGK
Trigger: CTTGCCTCCCAGGTTCAAGCAATTTTCGTGCCTCAG...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCCATATTTGTGATGGCTaGTGCCCTGGACTCATCATT +
Preference number: 4 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVHICDG*CPGLII
Trigger: AATGATGAGTCCAGGGCAGCAGCCATCACAAATATG...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GCCTTAGGAAGTAGGTTGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACTGGGGTGAGTCACAACCCCTaGAGAAACACTAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ALGSRLGSGLCGTGFQTGVSHNP*RNTRSG
Trigger: TCCAGACCTAGTGTTTCTGCAGGGGTTGTGACTCAC...CCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCTACTTCCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CCA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATCCGCCGCCGCTGCCATaGTCATGCCTGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHPPPLP*SCLLPA
Trigger: AGCAGGCAGCAGGCATGACCATGGCAGCGGCGGCGG...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATATCTAGTTTTTGCCCTTaGCTACTTGGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPISSFCP*LLGLGL
Trigger: GAGGCCCAGGCCAAGTAGCCAAGGGCAAAAACTAGA...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp CTGGAGGGGTGGGCTGCTAGCTCCTGTCTTAACCATTGGGAGAATTATTCTCCGTCTAGTTTTTGCCCTTaGCTACTTGGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LEGWAASSCLNHWENYSPSSFCP*LLGLGL
Trigger: GAGGCCCAGGCCAAGTAGCCAAGGGCAAAAACTAGA...CGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGAGCGTTTTACCATTGTaGAGCCCACGAAATCAGCCT +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAASVLPL*SPRNQP
Trigger: AGGCTGATTTCGTGGGCTCCACAATGGTAAAACGCT...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCGCTCTGGAGCTGGGATaGCCCCAGAGGGTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLAALELG*PQRVSQ
Trigger: TTGGGAAACCCTCTGGGGCCATCCCAGCTCCAGAGC...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CAA 72 bp CCAGACACCAAATCTGCCGGCACCTTGATCTTGGACTaGCCAGCCTCCTGGGCAGTGAGAAGTAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: PDTKSAGTLILD*PASWAVRSKFL
Trigger: CAGAAATTTACTTCTCACTGCCCAGGAGGCTGGCAAGTCCAAGATCAAGGTGCCGGCAGATTTGGTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR TCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAAGCCAGGTCATGGTTTaGATGTATTGCTCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTSQVMV*MYCSVF
Trigger: GAACACGGAGCAATACATTCAAACCATGACCTGGCT...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAGACTCAGCATCTCTGTaGACCTGCATCTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTDSASL*TCICSN
Trigger: ATTGGAACAGATGCAGGTTCACAGAGATGCTGAGTC...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp CTGGAGGGGTGGGCTGCTAGCTCCTGTCTTAACCATTGGGAGAATTATTCTCCGTCCAAAGCAGAAACTTaGAGCCAAGAACACCAGCGC +
Preference number: 4 (lower is better)
Translates to: LEGWAASSCLNHWENYSPSKAET*SQEHQR
Trigger: GCGCTGGTGTTCTTGGCTTCAAGTTTCTGCTTTGGA...CGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAGGTCATCCGGGCAGCTaGGCTCAGCACCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEGHPGS*AQHPAL
Trigger: TAGTGCTGGGTGCTGAGCTCAGCTGCCCGGATGACC...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGAGTAATGTGGCCACAATaGGGTCTCACTGACCCCACA +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERVMWPQ*GLTDPT
Trigger: TGTGGGGTCAGTGAGACCTCATTGTGGCCACATTAC...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATCAGGCGGGCAGTTCGTaGTGCAGTGGAGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHQAGSS*CSGVLR
Trigger: CCGGAGGACTCCACTGCAGCACGAACTGCCCGCCTG...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTATCCTGCCCTCCTCCATaGTGGGGAAGGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLSCPPP*WGRTQE
Trigger: TTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCAGGA...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp TCAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGAACAAAACACCCAGTaGAGTGTGCCAGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SDPHEVNPIMPAQSGAVTEQNTQ*SVPDPS
Trigger: ACTGGGATCTGGCACACTGCACTGGGTGTTTTGTTC...TGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGTTTTACCAACAGGCTTCCAAACTaGGCATTGAAGAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: GNWPSPGEPLCHSQQRFTNRLPN*ALKKLL
Trigger: CAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTT...GGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTGAGGGGTTCCGAAGGTaGGGGGCCTTTCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVEGFRR*GAFLTR
Trigger: CCTGGTCAGAAAGGCCCCCCACCTTCGGAACCCCTC...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CCA 90 bp GGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGTTTTACCTCAGGAAATGTTCCATaGAGGAGTCAAGAACCGTTT +
Preference number: 4 (lower is better)
Translates to: GNWPSPGEPLCHSQQRFTSGNVP*RSQEPF
Trigger: AAACGGTTCTTGACTCCTCCATGGAACATTTCCTGA...GGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCGAACTGGCCATCACCTaGGGAACCTCTCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLAELAIT*GTSLPL
Trigger: GAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTC...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp CCCATTAAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTGCCCTCCTCCATGCTaGGGAAGGACGCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: PIKCQPPIHPDGENTTNVCPPPC*GRTQEP
Trigger: TGGTTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCA...AACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTTAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCCTTGGCCAGGCCTGGTaGCATGTACCAGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLALGQAW*HVPVVP
Trigger: TGGGACTACTGGTACATGCCACCAGGCCTGGCCAAG...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp CTGGAGGGGTGGGCTGCTAGCTCCTGTCTTAACCATTGGGAGAATTATTCTCCGTTTGGAAGGCTGAGGTaGGCAGAACACTTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LEGWAASSCLNHWENYSPFGRLR*AEHLRL
Trigger: TAGCCTCAAGTGTTCTGCCCACCTCAGCCTTCCAAA...CGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TCCACTCCTGCAAAACCAGCTGTGACTCAGCATCTCTGTGAACCTGCATCTGTTTCTCAGCCTGAACAATaGCCACATCGAACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: STPAKPAVTQHLCEPASVSQPEQ*PHRTGP
Trigger: GGGACCTGTTCGATGTGGTCATTGTTCAGGCTGAGA...AACAGATGCAGGTTCACAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR TCA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCTTCCAAACTGGGCATTaGAGAAACTCTTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVFQTGH*RNSWSF
Trigger: AAATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAA...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAAGCCTTAGTACCAAATaGTTTGGGAACTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTSLSTK*FGNWPS
Trigger: TGATGGCCAGTTCCCAAATCATTTGGTACTAAGGCT...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGAGCCTCCAATACACCCTaGTGGCGAAAACACCTAGAA +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERASNTP*WRKHLE
Trigger: TTCTAGGTGTTTTCGCCATCAGGGTGTATTGGAGGC...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp AAGCTTGACCTGCTAGAATACAGACATGGCATCAAGTGGTCTCACCTATCCCAGAAGGTACACAGTCAGTaGGCCTTGGTGGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: KLDLLEYRHGIKWSHLSQKVHSQ*ALVAQM
Trigger: CATCTGGGCCACCAAGGCTCACTGACTGTGTACCTT...CTGGGATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTATTGCTCCGTGTTCATCAACTCTGGGATGATTaGACCAGTCCTCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: ASQGLQPGHGLNVLLRVHQLWDD*TSPPAM
Trigger: CATGGCTGGAGGACTGGTGCAATCATCCCAGAGTTG...ATGAACACGGAGCAATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR GCA 90 bp AAGCCAAGAACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCCCTGCAGTTCCCAATaGATAGCCCGTAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: KPRTPAHSFRTPTPSSSGPCSSQ*IARKCS
Trigger: TGAACATTTACGGGCTATGCATTGGGAACTGCAGGG...CCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACAAAAGGGTCCAGGAGTTaGAGCTTCTCTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTKGSRS*SFSCSF
Trigger: GAAAGAACAAGAGAAGCTGCAACTCCTGGACCCTTT...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGGAACTTTCTCCTCTCTaGATCCCAGCTATAAGGTTA +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAAELSPL*IPAIRL
Trigger: TAACCTTATAGCTGGGATGCAGAGAGGAGAAAGTTC...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTAGAAAGGCTGGAGGGGTaGGCTGCTAGCTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLERLEG*AASSCL
Trigger: AAGACAGGAGCTAGCAGCCCACCCCTCCAGCCTTTC...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATAAGCGTTTTACCATTGTaGAGCCCACGAAATCAGCCT +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPISVLPL*SPRNQP
Trigger: AGGCTGATTTCGTGGGCTCCACAATGGTAAAACGCT...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCATGCCCTCCTCCATGCTaGGGAAGGACGCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPCPPPC*GRTQEP
Trigger: TGGTTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCA...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGACAGGCTTCTGTCACATaGGAGATCTCAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERQASVT*EISTLP
Trigger: TGGCAGTGTTGAGATCTCCCATGTGACAGAAGCCTG...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCATCTCAACTCTGGGATaGTTGCACCAGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLAISTLG*LHQSSS
Trigger: GCTGGAGGACTGGTGCAATCATCCCAGAGTTGAGAT...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp AAGCCAAGAACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGGAACCGTTTCAAGCTTaGCCTGCTAGAATACAGACA +
Preference number: 4 (lower is better)
Translates to: KPRTPAHSFRTPTPSSSGEPFQA*PARIQT
Trigger: TGTCTGTATTCTAGCAGGTCAAGCTTGAAACGGTTC...CCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp TGCAGTTCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTGCAGGAACCACACACTaGGGACAAAAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSSQCIARKCSGNVPWRSAGTTH*GQKGPG
Trigger: TCCTGGACCCTTTTGTCCTCAGTGTGTGGTTCCTGC...ACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACATTAAGTGCTATGGTCTaGATGTTTGTGACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTLSAMV*MFVTPK
Trigger: TTTGGGGGTCACAAACATTCAGACCATAGCACTTAA...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR GCA 90 bp TCAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGATGAGAAGGTCCCGTaGAGCATTAAATATCAGCGT +
Preference number: 4 (lower is better)
Translates to: SDPHEVNPIMPAQSGAVTDEKVP*SIKYQR
Trigger: ACGCTGATATTTAATGCTGCACGGGACCTTCTCATC...TGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATATCCTTTTTCCACTCCTaGAAAACCAGCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPISFFHS*KTSCDS
Trigger: TGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGA...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp AAGCCAAGAACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGACAGTTTCTAGTTTTTaGCCTTGGCTACTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KPRTPAHSFRTPTPSSSGTVSSF*PWLLGL
Trigger: CAGGCCAAGTAGCCAAGGGCAAAAACTAGAAACTGT...CCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp AGAGGTATATTCAACAAGTGTCTGAGCCTGATGGCTCAAGTACACACACTGGCCCCGAGATCACACCACTaGACTCCAGAATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RGIFNKCLSLMAQVHTLAPRSHH*TPEWAT
Trigger: TGTTGCCCATTCTGGAGTGCAGTGGTGTGATCTCGG...GGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGTCAGAGGGAATACAGTaGACTTATTACCTACAGAAC +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAASEGIQ*TYYLQN
Trigger: GTTCTGTAGGTAATAAGTGCACTGTATTCCCTCTGA...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp CAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGCTTCCTGATTTCTGCTaGATACCGGTGTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: QTHMKSTPSCLPNQGQLQLPDFC*IPVFID
Trigger: ATCAATGAACACCGGTATCCAGCAGAAATCAGGAAG...CTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATACCCTGCTTGTATATCTaGCCTTTCTGCAACTTATGG +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIPCLYI*PFCNLW
Trigger: CCATAAGTTGCAGAAAGGCCAGATATACAAGCAGGG...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATAGCTAGAATACAGACATaGCATCAAGTGGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIARIQT*HQVVSP
Trigger: AGGTGAGACCACTTGATGCCATGTCTGTATTCTAGC...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp CTGGAGGGGTGGGCTGCTAGCTCCTGTCTTAACCATTGGGAGAATTATTCTCCGGCTAGAATACAGACATaGCATCAAGTGGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: LEGWAASSCLNHWENYSPARIQT*HQVVSP
Trigger: AGGTGAGACCACTTGATGCCATGTCTGTATTCTAGC...CGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGATCCAATTCAACTGGGTaGGTGGCATGGCATAGCATT +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERSNSTG*VAWHSI
Trigger: AATGCTATGCCATGCCACCCACCCAGTTGAATTGGA...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TGCAGTTCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTGACACCGAGCAGTTCTaGGCGCAACACACACCCATT +
Preference number: 4 (lower is better)
Translates to: CSSQCIARKCSGNVPWRSDTEQF*AQHTPI
Trigger: AATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC...ACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGACTCCATGGGCCTTGCTaGACTGTCATATTTGTGATG +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERLHGPC*TVIFVM
Trigger: CATCACAAATATGACAGTCCAGCAAGGCCCATGGAG...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CAA 72 bp CACAGCCTGAGGACCAAATACAGCCCACAGCTTGTCTaGGTAAATCAAGTTGTGCTGGAACACAGCCATGAC +
Preference number: 4 (lower is better)
Translates to: HSLRTKYSPQLV*VNQVVLEHSHD
Trigger: GTCATGGCTGTGTTCCAGCACAACTTGATTTACCAAGACAAGCTGTGGGCTGTATTTGGTCCTCAGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CAA 72 bp ATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATaGCCGCCAACACAATCCATTAGAGCAGGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: IHLHVLSKGILP*PPTQSIRAGAS
Trigger: GCTAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATACCTCGTACATTTCAATaGCTTCTTCATCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIPRTFQ*LLHQGQ
Trigger: TTGTCCCTGATGAAGAAGTCATTGAAATGTACGAGG...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp CTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTGAAGAAACTCTTGGTCATGACTCAGCATCTCTGTaGACCTGCATCTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LVCAEQASKLGIEETLGHDSASL*TCICSN
Trigger: ATTGGAACAGATGCAGGTTCACAGAGATGCTGAGTC...ATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR TCA 90 bp TGCAGTTCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTGGTAGAAAGTGTGGCTaGCGTCATAGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CSSQCIARKCSGNVPWRSGRKCG*RHSSGG
Trigger: GCCTCCTGAACTATGACGTCAGCCACACTTTCTACC...ACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCACACTCAGACCCACATaGAGTCAACCCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGTLRPT*SQPHHA
Trigger: GGCATGATGGGGTTGACTTCATGTGGGTCTGAGTGT...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp CAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGTGGCATAGCATTTCATaGCAAAGATGCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QTHMKSTPSCLPNQGQLQWHSIS*QRCFFL
Trigger: CAGGAAAAAGCATCTTTGTCATGAAATGCTATGCCA...CTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACATGCATTAATTGTGCCTaGTATCATACAGGCACAATC +
Preference number: 4 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTCINCA*YHTGTI
Trigger: GATTGTGCCTGTATGATATCAGGCACAATTAATGCA...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TGCAGTTCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTTCAATCATGGCTCACTaGAGCCTCAACCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSSQCIARKCSGNVPWRSSIMAH*SLNLLG
Trigger: GCCCAGAAGGTTGAGGCTTCAGTGAGCCATGATTGA...ACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR GCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCATCACTGTGCCCCTaGAGTTCCCAATGCATAGCC +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEPSLCP*SSQCIA
Trigger: GGCTATGCATTGGGAACTGCAGGGGCACAGTGATGG...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTAGAAGCAGCTAATCTTTaGCCATCACTGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLEAANL*PSLCPC
Trigger: GCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTC...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGAAAGGAGCCCATGGAATaGCAGACTTGGATTTCATCA +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERKEPME*QTWISS
Trigger: TGATGAAATCCAAGTCTGGCATTCCATGGGCTCCTT...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTAACACCCAGTGCAGTGTaGCAGATCCCAGTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLTPSAV*QIPVES
Trigger: TGACTCAACTGGGATCTGGCACACTGCACTGGGTGT...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGAAGGGAATCTTGCCATTaGCGCCAACACAATCCATTA +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERRESCH*RQHNPL
Trigger: TAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCT...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTATTGCTCCGTGTTCATTCTGCAGCCAGGTCATaGTTTGAATGTATTGCTCCG +
Preference number: 4 (lower is better)
Translates to: ASQGLQPGHGLNVLLRVHSAARS*FECIAP
Trigger: CGGAGCAATACATTCAAACCATGACCTGGCTGCAGA...ATGAACACGGAGCAATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CCA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGCAGTTCGTGCTGCAGTaGAGTCCTCCGGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQQFVLQ*SPPGVE
Trigger: TTCTACCCCCGGAGGACTCCACTGCAGCACGAACTG...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp ATGCAGGTGCAATTAAGGATTCTTCCCTCCAACAAAAGGAATACATGCCACTTGAGGGCTGGAAGTAAATaGCCAGCCAGCAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: MQVQLRILPSNKRNTCHLRAGSK*PASSTP
Trigger: GGGAGTGCTGCTGGCTGGCCATTTACTTCCAGCCCT...CAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAATCTCAGCCTGAACAATaGCCACATCGAACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQESQPEQ*PHRTGP
Trigger: GGGACCTGTTCGATGTGGTCATTGTTCAGGCTGAGA...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TCTGTTCCAATAAGCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTATTATCTCAACTCTGGGATaGTTGCACCAGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVPISQSRSAARSWFECIISTLG*LHQSSS
Trigger: GCTGGAGGACTGGTGCAATCATCCCAGAGTTGAGAT...AATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR TCA 90 bp GCATCTGTTCCAATAAGCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTAGCCAGGTCATGGTTTaGATGTATTGCTCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: ASVPISQSRSAARSWFECSQVMV*MYCSVF
Trigger: GAACACGGAGCAATACATTCAAACCATGACCTGGCT...ACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR TCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAACACTCAGACCCACATaGAGTCAACCCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQETLRPT*SQPHHA
Trigger: GGCATGATGGGGTTGACTTCATGTGGGTCTGAGTGT...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGGCAGGAACCACACACTaGGGACAAAAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQAGTTH*GQKGPG
Trigger: TCCTGGACCCTTTTGTCCTCAGTGTGTGGTTCCTGC...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCATCGTTCACATGGGAATaGCTGTGTTCGGCCCCGTTA +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPSFTWE*LCSAPL
Trigger: TAACGGGGCCGAACACAGTCATTCCCATGTGAACGA...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp ATGCAGGTGCAATTAAGGATTCTTCCCTCCAACAAAAGGAATACATGCCACTTGGTGCCAGATCCCAGTTaGGTCATGATAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MQVQLRILPSNKRNTCHLVPDPS*VMIGWA
Trigger: TGCCCAGCCTATCATGACTCAACTGGGATCTGGCAC...CAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATAATACTTCCTGATTTCTaGTGGATACCGGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIILPDF*WIPVFI
Trigger: AATGAACACCGGTATCCAGCAGAAATCAGGAAGTAT...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp CTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTGAAGAAACTCTTGGTCATTCCTTTTTCCACTCCTaGAAAACCAGCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: LVCAEQASKLGIEETLGHSFFHS*KTSCDS
Trigger: TGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGA...ATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR GCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAGAAGCAGCTAATCTTTaGCCATCACTGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEEAANL*PSLCPC
Trigger: GCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTC...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR GCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGCCTGGGGAACCTCTCTaGCACTCACAGCAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLPGEPL*HSQQRF
Trigger: AAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGG...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGAGGAATACATGCCACTTaGATTGCCCCTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERGIHAT*IAPRKK
Trigger: TTTCTTTCTAGGGGCAATGCAAGTGGCATGTATTCC...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATTGGGAGGCAAGAGGTTaGAGTGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHWEARG*SEPRSH
Trigger: GTGTGATCTCGGCTCACTGCAACCTCTTGCCTCCCA...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp CGCATCTCCTTCCTTTCCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGCAAGTTCTGGAAATAATTaGCGTGAGTCACAACCCCTG +
Preference number: 4 (lower is better)
Translates to: RISFLSFFHSCKTSCDSASSGNN*RESQPL
Trigger: CAGGGGTTGTGACTCACGGCAATTATTTCCAGAACT...TGCTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGAAAGGAAGGAGATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR GCA 90 bp GCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTATTGCTCCGTGTTCATCCAGTCCTCCAGCCATaGTTTAGGGTCAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: ASQGLQPGHGLNVLLRVHPVLQP*FRVKSF
Trigger: AAAAGATTTGACCCTAAAGCATGGCTGGAGGACTGG...ATGAACACGGAGCAATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR GCA 90 bp CAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGTGGTTTACATATAGCTaGATTCTTCCTGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: QTHMKSTPSCLPNQGQLQWFTYS*ILPESA
Trigger: AGCAGATTCAGGAAGAATGCAGCTATATGTAAACCA...CTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR GCA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTAGCCTCCCAAGTAGCTaGTGCTATAGGCACCCATCA +
Preference number: 4 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVSLPSS*CYRHPS
Trigger: TGATGGGTGCCTATAGCAGCAGCTACTTGGGAGGCT...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CCA 90 bp GCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTATTGCTCCGTGTTCATCCCTGCTTGTATATCTaGCCTTTCTGCAACTTATGG +
Preference number: 4 (lower is better)
Translates to: ASQGLQPGHGLNVLLRVHPCLYI*PFCNLW
Trigger: CCATAAGTTGCAGAAAGGCCAGATATACAAGCAGGG...ATGAACACGGAGCAATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CCA 90 bp AAGCTTGACCTGCTAGAATACAGACATGGCATCAAGTGGTCTCACCTATCCCAGTCTGCAGCCAGGTCATaGTTTGAATGTATTGCTCCG +
Preference number: 4 (lower is better)
Translates to: KLDLLEYRHGIKWSHLSQSAARS*FECIAP
Trigger: CGGAGCAATACATTCAAACCATGACCTGGCTGCAGA...CTGGGATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp CTGGAGGGGTGGGCTGCTAGCTCCTGTCTTAACCATTGGGAGAATTATTCTCCGCTACCACAAATGTTTTaGTTCTTCAAACCCACTCGT +
Preference number: 4 (lower is better)
Translates to: LEGWAASSCLNHWENYSPLPQMF*FFKPTR
Trigger: ACGAGTGGGTTTGAAGAACCAAAACATTTGTGGTAG...CGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAATGGCTAAGTTGTGGTaGCCATCTTCCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPMAKLW*PSSSSP
Trigger: AGGGGAGGAGGAAGATGGCCACCACAACTTAGCCAT...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGGAAATGAGAAAAGCTTaGTTAGCTAGGTCATATCTA +
Preference number: 4 (lower is better)
Translates to: MIWELAITWGTSLPLTAAEMRKA*LARSYL
Trigger: TAGATATGACCTAGCTAACCAAGCTTTTCTCATTTC...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGACAGTCAGTGAGCCTTaGTGGCCCAGATGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQTVSEP*WPRCQA
Trigger: AGCCTGACATCTGGGCCACCAAGGCTCACTGACTGT...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAGTTACCGCCACGACATaGGTCTACAGTCTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEVTATT*VYSLQG
Trigger: ACCTTGCAGACTGTAGACCCATGTCGTGGCGGTAAC...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGGCCCCAAGTGGTCTTTaGCAGCAAATGAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLAPSGL*QQMSRQ
Trigger: CTGCCTGCTCATTTGCTGCCAAAGACCACTTGGGGC...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTCTCAAATACCAGGAGTaGCCTCCTGTGGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVLKYQE*PPVEDV
Trigger: CACATCCTCCACAGGAGGCCACTCCTGGTATTTGAG...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CCA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTGAGCCTGTAAGCCTTTaGGAGGTGATTAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVEPVSL*EVIKGE
Trigger: CTCCCCCTTAATCACCTCCCAAAGGCTTACAGGCTC...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR TCA 90 bp CCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGCATCTCTGTGAACCTGCATTTGGCCCCAGCCTTTaGTCATTTCATTCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PFSTPAKPAVTQHLCEPAFGPSL*SFHSKK
Trigger: TTTCTTGGAATGAAATGATCAAAGGCTGGGGCCAAA...TGCAGGTTCACAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR GCA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGCAACTCTGGGATGATTaGACCAGTCCTCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQQLWDD*TSPPAM
Trigger: CATGGCTGGAGGACTGGTGCAATCATCCCAGAGTTG...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGACAACCCCATCATGCCTaGCCAATCAGGGGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRQPHHA*PIRGSY
Trigger: GTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTG...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTAAACCCACTCGTTTCTTaGAGAAGGCTCTACAGAAGG +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLNPLVS*RRLYRR
Trigger: CCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGTT...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGGGCTGTTCCACTAGCTaGCAGGTTTTGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLGCSTS*QVLTRA
Trigger: AGCTCTGGTCAAAACCTGCCAGCTAGTGGAACAGCC...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAATCTTCCTCCTCCCCTaGCCAATCCAAGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRIFLLP*PIQAPL
Trigger: GAGAGGTGCTTGGATTGGCCAGGGGAGGAGGAAGAT...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAACAAGGAGCCCCAAGTaGTCTTTGGCAGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPTRSPK*SLAANE
Trigger: CTCATTTGCTGCCAAAGACCACTTGGGGCTCCTTGT...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CAA 72 bp AAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTaGCCATTGCCGCCAACACAATCCATTAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KVIHLHVLSKGI*PLPPTQSIRAG
Trigger: CCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTAGAACCGTTTCAAGCTTaGCCTGCTAGAATACAGACA +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLEPFQA*PARIQT
Trigger: TGTCTGTATTCTAGCAGGTCAAGCTTGAAACGGTTC...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp ATGCAGGTGCAATTAAGGATTCTTCCCTCCAACAAAAGGAATACATGCCACTTGTCCAAAGCAGAAACTTaGAGCCAAGAACACCAGCGC +
Preference number: 4 (lower is better)
Translates to: MQVQLRILPSNKRNTCHLSKAET*SQEHQR
Trigger: GCGCTGGTGTTCTTGGCTTCAAGTTTCTGCTTTGGA...CAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAGCAACACCTACTTCCTaGATCTGCTTCTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEATPTS*ICFSKA
Trigger: TGCTTTGGAGAAGCAGATTCAGGAAGTAGGTGTTGC...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCCAATGGCCCAGAGACTaGAATTCTTCTAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGQWPRD*NSSNWE
Trigger: TTCCCAGTTAGAAGAATTTCAGTCTCTGGGCCATTG...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGAAGGTTCTCTATTAGTTaGACAGAACAATCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERRFSIS*TEQSRN
Trigger: GTTCCTTGATTGTTCTGTTCAACTAATAGAGAACCT...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCACAGTTTCTAGTTTTTaGCCTTGGCTACTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGTVSSF*PWLLGL
Trigger: CAGGCCAAGTAGCCAAGGGCAAAAACTAGAAACTGT...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTAAACTCATTAAGTTTCTaGCATCTGGCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLNSLSF*HLARSP
Trigger: TGGGCTCCTTGCCAGATGGCAGAAACTTAATGAGTT...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TCAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAAAGAACATACTACTGTaGCTTACTGTGTTCATAACA +
Preference number: 4 (lower is better)
Translates to: SDPHEVNPIMPAQSGAVTKNILL*LTVFIT
Trigger: TGTTATGAACACAGTAAGGCACAGTAGTATGTTCTT...TGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGATCCCTTGTACCAATATaGATTCATCAATGTGCACAT +
Preference number: 4 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERSLVPI*IHQCAH
Trigger: ATGTGCACATTGATGAATGCATATTGGTACAAGGGA...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGGACCTCCATGGGCCTTaGTGGACTGTCATATTTGTG +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLDLHGP*WTVIFV
Trigger: CACAAATATGACAGTCCAGCAAGGCCCATGGAGGTC...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TTGCACCAGTCCTCCAGCCATGCTTTAGGGTCAAATCTTTTTGATGGTAATGGTCTCAGATCTCAACTCTaGGATGATTGCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LHQSSSHALGSNLFDGNGLRSQL*DDCTSP
Trigger: AGGACTGGTGCAATCATCCCAGAGTTGAGATCTGAG...ACCATTACCATCAAAAAGATTTGACCCTAAAGCATGGCTGGAGGACTGGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTAACGAAATCAGCCTTCTaGAAGCAGCTAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLTKSAF*KQLIFA
Trigger: GGCAAAGATTAGCTGCTTCCAGAAGGCTGATTTCGT...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAGACATGGCTAAGTTGTaGTGGCCATCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRDMAKL*WPSSSS
Trigger: GGAGGAGGAAGATGGCCACCACAACTTAGCCATGTC...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCAAGGAACCCTGTGTCTaGCCAAATTTCGTCTTAGAG +
Preference number: 4 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGKEPCV*PNFVLE
Trigger: CTCTAAGACGAAATTTGGCCAGACACAGGGTTCCTT...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp AAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTTTGGTTGACTTGCCAGCCTCCTaGGCAGTGAGAAGTAAATTT +
Preference number: 4 (lower is better)
Translates to: KCQPPIHPDGENTTNVLVDLPAS*AVRSKF
Trigger: AAATTTACTTCTCACTGCCCAGGAGGCTGGCAAGTC...AACCAAAACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR TCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCACATACTCATACTTCCTaGTTTCTGCTGGATACCGGT +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPHTHTS*FLLDTG
Trigger: ACCGGTATCCAGCAGAAATCAGGAAGTATGAGTATG...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp CCCATTAAGTGTCAGCCTCCAATACACCCTGATGGCGAAAACACCACAAATGTTAGGCTGTGTTCTATTTaGTGTGATGTGCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: PIKCQPPIHPDGENTTNVRLCSI*CDVPEC
Trigger: ACATTCTGGCACATCACATCAAATAGAACACAGCCT...AACATTTGTGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTTAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR TCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAATTAGGTCACCTAACGTaGACACTCATGGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQELGHLT*TLMETG
Trigger: ACCTGTTTCCATGAGTGTTCACGTTAGGTGACCTAA...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTACCAAAATTCCTGTGTTaGAATCTTTACCCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLPKFLC*NLYPQG
Trigger: ACCTTGGGGGTAAAGATTTCAACACAGGAATTTTGG...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR GCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTACTCCCCTCATGTTCCTaGCATCCTTTAGATTTAAGA +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLLPSCS*HPLDLR
Trigger: TCTTAAATCTAAAGGATGGCAGGAACATGAGGGGAG...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TGCAGTTCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTAAAGAAAATCAGCTGTaGAAGTCCCTTCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: CSSQCIARKCSGNVPWRSKENQL*KSLPKG
Trigger: TCCCTTTGGAAGGGACTTGCACAGCTGATTTTCTTT...ACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGTCAGCAAGGGAATCTTaGCATTGCCGCCAACACAAT +
Preference number: 4 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQSARES*HCRQHN
Trigger: ATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGA...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAGTCAGAGTTCAAACCTaGAGGACTGAAAACACACAG +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEVRVQT*RTENTQ
Trigger: CTGTGTGTTTTCAGTCCTGCAGGTTTGAACTCTGAC...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GAAGTAGGTTGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTGAAATCATTAAAGAAGTTTaGCTTCTCAGCCTGAACAAT +
Preference number: 4 (lower is better)
Translates to: EVGWVLVCAEQASKLGIEIIKEV*LLSLNN
Trigger: ATTGTTCAGGCTGAGAAGCCAAACTTCTTTAATGAT...TTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCTACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCAACAGGCTTCCAAACTaGGCATTGAAGAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGNRLPN*ALKKLL
Trigger: CAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTT...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAGGTTTAACAAGCTCCTaGGAGACCTACCACAAATGT +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEGLTSS*ETYHKC
Trigger: ACATTTGTGGTAGGTCTCCCAGGAGCTTGTTAAACC...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp AAGCTTGACCTGCTAGAATACAGACATGGCATCAAGTGGTCTCACCTATCCCAGATTCCACGAGATAACTaGAAAAGTCTCCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: KLDLLEYRHGIKWSHLSQIPRDN*KSLQSQ
Trigger: CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAAT...CTGGGATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp AAGCTTGACCTGCTAGAATACAGACATGGCATCAAGTGGTCTCACCTATCCCAGACACCACAAATGTTTTaGTTCTTCAAACCCACTCGT +
Preference number: 4 (lower is better)
Translates to: KLDLLEYRHGIKWSHLSQTPQMF*FFKPTR
Trigger: ACGAGTGGGTTTGAAGAACCAAAACATTTGTGGTGT...CTGGGATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
3UTR CAA 72 bp AGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTATaGCTCCGTGTTCATGATTTTGAGCTCAGATCTCAA +
Preference number: 4 (lower is better)
Translates to: SQGLQPGHGLNV*LRVHDFELRSQ
Trigger: TTGAGATCTGAGCTCAAAATCATGAACACGGAGCAATACATTCAAACCATGACCTGGCTGCAGACCTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR TCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAAGTCGATGTTGTTCTTaGGGAAGTATTCATTCACGC +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPSRCCS*GSIHSR
Trigger: GCGTGAATGAATACTTCCTCAAGAACAACATCGACT...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAGTGGACGTCTCGAATTaGATCCTTGACATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEVDVSN*ILDIFV
Trigger: TACAAAGATGTCAAGGATTCAATTCGAGACGTCCAC...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGAGCCTTAGTACCAAATaGTTTGGGAACTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLSLSTK*FGNWPS
Trigger: TGATGGCCAGTTCCCAAATCATTTGGTACTAAGGCT...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGATCAAACCTGCAGGACTaGAAACACACAGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRSNLQD*KHTEAL
Trigger: CAGTGCTTCTGTGTGTTTTCAGTCCTGCAGGTTTGA...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATTCCTTTTTCCACTCCTaGAAAACCAGCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHSFFHS*KTSCDS
Trigger: TGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGA...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp ATGGACTCAGACAGTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATCCTGGGGAACCTCTCTaGCACTCACAGCAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: MDSDSKYSLTYVCLYNLHPGEPL*HSQQRF
Trigger: AAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGG...ATGAAGATTATATAGACACACGTATGTAAGACTGTACTTACTGTCTGAGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR GCA 90 bp ATGCAGGTGCAATTAAGGATTCTTCCCTCCAACAAAAGGAATACATGCCACTTGAAAGGGTCCAGGAGTTaGAGCTTCTCTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: MQVQLRILPSNKRNTCHLKGSRS*SFSCSF
Trigger: GAAAGAACAAGAGAAGCTGCAACTCCTGGACCCTTT...CAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAACCCACTCGTTTCTTaGAGAAGGCTCTACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRNPLVS*RRLYRR
Trigger: CCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGTT...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGATTTGTGATGGCTGCTaGCCTGGACTCATCATTGTT +
Preference number: 4 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQICDGC*PGLIIV
Trigger: AACAATGATGAGTCCAGGGCAGCAGCCATCACAAAT...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGACTCAGATCTCAACTCTaGGATGATTGCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRLRSQL*DDCTSP
Trigger: AGGACTGGTGCAATCATCCCAGAGTTGAGATCTGAG...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TCTGTTCCAATAAGCCAGTCAAGGTCTGCAGCCAGGTCATGGTTTGAATGTATTAACAGGCTTCCAAACTaGGCATTGAAGAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: SVPISQSRSAARSWFECINRLPN*ALKKLL
Trigger: CAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTT...AATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CCA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATACGAAATCAGCCTTCTaGAAGCAGCTAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHTKSAF*KQLIFA
Trigger: GGCAAAGATTAGCTGCTTCCAGAAGGCTGATTTCGT...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAAATCTAAGAGAAGGCTaGACATGGCTAAGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPNLREG*TWLSCG
Trigger: ACCACAACTTAGCCATGTCCAGCCTTCTCTTAGATT...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GTTCAGGAAATGTTCCATGGAGGAGTCAAGAACCGTTTCAAGCTTGACCTGCTAAAAACACCCTATAACTaGCACCTGGTAGGTAATCAA +
Preference number: 4 (lower is better)
Translates to: VQEMFHGGVKNRFKLDLLKTPYN*HLVGNQ
Trigger: TTGATTACCTACCAGGTGCCAGTTATAGGGTGTTTT...TAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392876.8
3UTR CAA 72 bp TCTGCCATCTGGCAAGGAGCCCATGGAATGCCAGACTaGGATTTCATCAATAGATGGTTACATACATTTATC +
Preference number: 4 (lower is better)
Translates to: SAIWQGAHGMPD*DFINRWLHTFI
Trigger: GATAAATGTATGTAACCATCTATTGATGAAATCCAAGTCTGGCATTCCATGGGCTCCTTGCCAGATGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGACGTGTGGAGGTGCTTTaGATAAAACACCAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRRVEVL*IKHQGV
Trigger: TACACCTTGGTGTTTTATTCAAAGCACCTCCACACG...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCACTCGAATTGAATCCTTaGCATCTTTGTACAGATGCA +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPLELNP*HLCTDA
Trigger: TGCATCTGTACAAAGATGTCAAGGATTCAATTCGAG...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp TTGCACCAGTCCTCCAGCCATGCTTTAGGGTCAAATCTTTTTGATGGTAATGGTTTCCAAACTGGGCATTaGAGAAACTCTTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: LHQSSSHALGSNLFDGNGFQTGH*RNSWSF
Trigger: AAATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAA...ACCATTACCATCAAAAAGATTTGACCCTAAAGCATGGCTGGAGGACTGGTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR TCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAATTCCAAACTGGGCATTaGAGAAACTCTTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEFQTGH*RNSWSF
Trigger: AAATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAA...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR TCA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATAGGCTGTGTTCTATTTaGTGTGATGTGCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHRLCSI*CDVPEC
Trigger: ACATTCTGGCACATCACATCAAATAGAACACAGCCT...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp AAGCTTGACCTGCTAGAATACAGACATGGCATCAAGTGGTCTCACCTATCCCAGACGAATTGCAAAATTTaGGTCATACTCATACTTCCT +
Preference number: 4 (lower is better)
Translates to: KLDLLEYRHGIKWSHLSQTNCKI*VILILP
Trigger: AGGAAGTATGAGTATGACCCAAATTTTGCAATTCGT...CTGGGATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGTCAGGAAATGTTCCATaGAGGAGTCAAGAACCGTTT +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLSGNVP*RSQEPF
Trigger: AAACGGTTCTTGACTCCTCCATGGAACATTTCCTGA...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp GTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATGGAAATGACCAGTGGCTGTTCCACTAGCTaGCAGGTTTTGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VSTVLHTCVYIIFMEMTSGCSTS*QVLTRA
Trigger: AGCTCTGGTCAAAACCTGCCAGCTAGTGGAACAGCC...ACTGGTCATTTCCATGAAGATTATATAGACACACGTATGTAAGACTGTACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CCA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAATTCAACTGGGTGGGTaGCATGGCATAGCATTTCAT +
Preference number: 4 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRIQLGG*HGIAFH
Trigger: ATGAAATGCTATGCCATGCCACCCACCCAGTTGAAT...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGTGTACATTATTCCTTTaGTGTGGACGTCTCGAATTG +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLCTLFL*CGRLEL
Trigger: CAATTCGAGACGTCCACATCAAAGGAATAATGTACA...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR TCA 90 bp GTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATGGAAATGACCAGTCTATCCCAGGAAACCTaGTGTTCCAGGACCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VSTVLHTCVYIIFMEMTSLSQET*CSRTSV
Trigger: TACTGAGGTCCTGGAACATCAGGTTTCCTGGGATAG...ACTGGTCATTTCCATGAAGATTATATAGACACACGTATGTAAGACTGTACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR GCA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAATGAAGTCCACGAATTaGAAAATTTGGGTCATACTC +
Preference number: 4 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPMKSTN*KIWVIL
Trigger: GAGTATGACCCAAATTTTGCAATTCGTGGACTTCAT...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCTATATCTGGCCTTTCTaGAACTTATGGATTTTATCC +
Preference number: 4 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGYIWPF*NLWILS
Trigger: GGATAAAATCCATAAGTTGCAGAAAGGCCAGATATA...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TTGCACCAGTCCTCCAGCCATGCTTTAGGGTCAAATCTTTTTGATGGTAATGGTTATATCTGGCCTTTCTaGAACTTATGGATTTTATCC +
Preference number: 4 (lower is better)
Translates to: LHQSSSHALGSNLFDGNGYIWPF*NLWILS
Trigger: GGATAAAATCCATAAGTTGCAGAAAGGCCAGATATA...ACCATTACCATCAAAAAGATTTGACCCTAAAGCATGGCTGGAGGACTGGTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR GCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGATAGCACTCAGAGAGTaGAGTAAATATGCACTTTAC +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLIALRE*SKYALY
Trigger: GTAAAGTGCATATTTACTGCACTCTCTGAGTGCTAT...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAATGCATTCATCAATGTaGACATCAGAGAACAAAACA +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEMHSSM*TSENKT
Trigger: TGTTTTGTTCTCTGATGTGCACATTGATGAATGCAT...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp GTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATGGAAATGACCAGTCTCCTGTGGAGGATGTaGTCTTCTGAAATGACGAAC +
Preference number: 4 (lower is better)
Translates to: VSTVLHTCVYIIFMEMTSLLWRM*SSEMTN
Trigger: GTTCGTCATTTCAGAAGAGCACATCCTCCACAGGAG...ACTGGTCATTTCCATGAAGATTATATAGACACACGTATGTAAGACTGTACTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CCA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAATCATTAAAGAAGTTTaGCTTCTCAGCCTGAACAAT +
Preference number: 4 (lower is better)
Translates to: SQCIARKCSGNVPWRSQEIIKEV*LLSLNN
Trigger: ATTGTTCAGGCTGAGAAGCCAAACTTCTTTAATGAT...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CCA 90 bp ATGCAGGTGCAATTAAGGATTCTTCCCTCCAACAAAAGGAATACATGCCACTTGATGGAATGCCAGACTTaGATTTCATCAATAGATGGT +
Preference number: 4 (lower is better)
Translates to: MQVQLRILPSNKRNTCHLMECQT*ISSIDG
Trigger: ACCATCTATTGATGAAATCCAAGTCTGGCATTCCAT...CAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR GCA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGGTACTTTTCAATGTCTaGTTCAATTGCTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLVLFNV*FNCSVH
Trigger: ATGTACAGAGCAATTGAAGCAGACATTGAAAAGTAC...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS GCA 90 bp TGTCGCTGCCCTCGCCCCGGCCCCGCGTGCCACCACCGCCGCCGCTaGCATGGTCATGCCTGCTGCCTGCTGCCGCCACCGCCGCCGCGC +
Preference number: 5 (lower is better)
Translates to: CRCPRPGPACHHRRR*HGHACCLLPPPPPR
Trigger: GCGCGGCGGCGGTGGCGGCAGCAGGCAGCAGGCATGACCATGGCAGCGGCGGCGGTGGTGGCACGCGGGGCCGGGGCGAGGGCAGCGACA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS GCA 90 bp CCGCGTGCCACCACCGCCGCCGCTGCCATGGTCATGCCTGCTGCCTaGTGCCGCCACCGCCGCCGCGCCGCTCTGCGACTGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PRATTAAAAMVMPAA*CRHRRRAALRLLLP
Trigger: GGGCAGCAGCAGTCGCAGAGCGGCGCGGCGGCGGTGGCGGCAGCAGGCAGCAGGCATGACCATGGCAGCGGCGGCGGTGGTGGCACGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACATTTGCCCTTGGCTACTaGGCCTGGGCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTFALGY*AWASCR
Trigger: CCTGCAGGAGGCCCAGGCCAAGTAGCCAAGGGCAAA...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CAA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCGCCTTAGGAAGTAGGTaGGGTTCTGGTCTGTGCGGA +
Preference number: 5 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVALGSR*GSGLCG
Trigger: TCCGCACAGACCAGAACCCAACCTACTTCCTAAGGC...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AGGAAGGTTCATAGGACAGTGCTGTGGGCTGAGCCGGCTGGGTACAGGCTTGTCAGCAGCGTTTTACCATaGTGGAGCCCACGAAATCAG +
Preference number: 5 (lower is better)
Translates to: RKVHRTVLWAEPAGYRLVSSVLP*WSPRNQ
Trigger: CTGATTTCGTGGGCTCCACAATGGTAAAACGCTGCT...GACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGACTAGCTGGCAGGTTTaGACCAGAGCTCTCATCTCC +
Preference number: 5 (lower is better)
Translates to: STVAGWVPRKQILRWRMATSWQV*TRALIS
Trigger: GGAGATGAGAGCTCTGGTCAAAACCTGCCAGCTAGT...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGGGACCTCCATGGGCCTaGCTGGACTGTCATATTTGT +
Preference number: 5 (lower is better)
Translates to: MIWELAITWGTSLPLTAAGPPWA*LDCHIC
Trigger: ACAAATATGACAGTCCAGCAAGGCCCATGGAGGTCC...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp TCAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGCCTTAGGAAGTAGGTaGGGTTCTGGTCTGTGCGGA +
Preference number: 5 (lower is better)
Translates to: SDPHEVNPIMPAQSGAVTALGSR*GSGLCG
Trigger: TCCGCACAGACCAGAACCCAACCTACTTCCTAAGGC...TGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CAA 90 bp GGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGTTTTACCTGGGGAGAAGCCTTATaGGATCTAAAGGGTCACCTT +
Preference number: 5 (lower is better)
Translates to: GNWPSPGEPLCHSQQRFTWGEAL*DLKGHL
Trigger: AAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCA...GGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp GGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGTTTTACCAGCCCACAGCTTGTCTaGGTAAATCAAGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GNWPSPGEPLCHSQQRFTSPQLV*VNQVVL
Trigger: CAGCACAACTTGATTTACCAAGACAAGCTGTGGGCT...GGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGCAGCCAGGTCATGGTTaGAATGTATTGCTCCGTGTT +
Preference number: 5 (lower is better)
Translates to: STVAGWVPRKQILRWRMAQPGHG*NVLLRV
Trigger: AACACGGAGCAATACATTCAAACCATGACCTGGCTG...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp GAAGTAGGTTGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTGAAGCCTTAGGAAGTAGGTaGGGTTCTGGTCTGTGCGGA +
Preference number: 5 (lower is better)
Translates to: EVGWVLVCAEQASKLGIEALGSR*GSGLCG
Trigger: TCCGCACAGACCAGAACCCAACCTACTTCCTAAGGC...TTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCTACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CAA 90 bp CAGACCCACATGAAGTCAACCCCATCATGCCTGCCCAATCAGGGGCAGTTACAGAGCAGCGTTTTACCATaGTGGAGCCCACGAAATCAG +
Preference number: 5 (lower is better)
Translates to: QTHMKSTPSCLPNQGQLQSSVLP*WSPRNQ
Trigger: CTGATTTCGTGGGCTCCACAATGGTAAAACGCTGCT...CTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CAA 90 bp AAGCCAAGAACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGACTAGCTGGCAGGTTTaGACCAGAGCTCTCATCTCC +
Preference number: 5 (lower is better)
Translates to: KPRTPAHSFRTPTPSSSGTSWQV*TRALIS
Trigger: GGAGATGAGAGCTCTGGTCAAAACCTGCCAGCTAGT...CCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CAA 90 bp CCAGACACCAAATCTGCCGGCACCTTGATCTTGGACTTGCCAGCCTCCTGGGCACCCAAAATTCCTGTGTaGAAATCTTTACCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: PDTKSAGTLILDLPASWAPKIPV*KSLPPR
Trigger: CCTTGGGGGTAAAGATTTCAACACAGGAATTTTGGG...TGCCCAGGAGGCTGGCAAGTCCAAGATCAAGGTGCCGGCAGATTTGGTGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS GCA 90 bp ATCAGGGACAACACTGAGGCCTCTCAACACCCTTCTCAGCAGCGATaGAACAGTGAACTTCCCTACAGCCTCATTCTGAACGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: IRDNTEASQHPSQQR*NSELPYSLILNAPS
Trigger: AGAAGGAGCGTTCAGAATGAGGCTGTAGGGAAGTTCACTGTTGCATCGCTGCTGAGAAGGGTGTTGAGAGGCCTCAGTGTTGTCCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465502.1
CDS-3UTR CAA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGAGGATACCGGTGTTCATaGATGAGAAGGTCCCGTGCA +
Preference number: 5 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERGYRCS*MRRSRA
Trigger: TGCACGGGACCTTCTCATCAATGAACACCGGTATCC...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGTTAGTACCAAATGATTaGGGAACTGGCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKLVPND*GTGHHL
Trigger: CAGGTGATGGCCAGTTCCCAAATCATTTGGTACTAA...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp TCCTCCTCCCCTGGCCAATCCAAGCACCTCTCAGTTGGTAACTCATTAGAGAGACTCAGCAAGGGAATCTaGCCATTGCCGCCAACACAA +
Preference number: 5 (lower is better)
Translates to: SSSPGQSKHLSVGNSLERLSKGI*PLPPTQ
Trigger: TTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAG...TCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGCGGCTGGGTACAGGCTaGTCAGGGAGAGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQRLGTG*SGRGTG
Trigger: CCCAGTGCCTCTCCCTGACAAGCCTGTACCCAGCCG...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AGCACTGTCGCAGGTTGGGTTCCCCGAAAGCAGATACTGAGGTGGAGAATGGCGTCTGGATTCAACAAGTaGCTCATAATGGAAGGAACC +
Preference number: 5 (lower is better)
Translates to: STVAGWVPRKQILRWRMASGFNK*LIMEGT
Trigger: GGTTCCTTCCATTATGAGCAACTTGTTGAATCCAGA...CGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AAGCCAAGAACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGATTCCCTACCCTTTCTaGAACGCACTAGCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: KPRTPAHSFRTPTPSSSGIPYPF*NALAVS
Trigger: TGACACTGCTAGTGCGTTCAAGAAAGGGTAGGGAAT...CCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp ATGATTTGGGAACTGGCCATCACCTGGGGAACCTCTCTGCCACTCACAGCAGCGCACGAATTGCAAAATTaGGGTCATACTCATACTTCC +
Preference number: 5 (lower is better)
Translates to: MIWELAITWGTSLPLTAAHELQN*GHTHTS
Trigger: GGAAGTATGAGTATGACCCAAATTTTGCAATTCGTG...CGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp GCCAGCCAGCAGCACTCCCAGCTGTTAGGGGAGTATGTCCTTCAGTCTGGAAAGTCTCGAATTGAATCCTaGACATCTTTGTACAGATGC +
Preference number: 5 (lower is better)
Translates to: ASQQHSQLLGEYVLQSGKSRIES*TSLYRC
Trigger: GCATCTGTACAAAGATGTCAAGGATTCAATTCGAGA...CTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp CTGGAGGGGTGGGCTGCTAGCTCCTGTCTTAACCATTGGGAGAATTATTCTCCGAAGCTACTGGGGCTATaGGTGATGAGAAACATCTTC +
Preference number: 5 (lower is better)
Translates to: LEGWAASSCLNHWENYSPKLLGL*VMRNIF
Trigger: GAAGATGTTTCTCATCACCAATAGCCCCAGTAGCTT...CGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp CTGGAGGGGTGGGCTGCTAGCTCCTGTCTTAACCATTGGGAGAATTATTCTCCGCCTACCACAAATGTTTaGGTTCTTCAAACCCACTCG +
Preference number: 5 (lower is better)
Translates to: LEGWAASSCLNHWENYSPPTTNV*VLQTHS
Trigger: CGAGTGGGTTTGAAGAACCAAAACATTTGTGGTAGG...CGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp ACACCAGCGCATTCTTTTAGAACCCCGACACCGAGCAGTTCTGGGCGCAACACATACATGCCACTTGCATaGCCCCTAGAAAGAAATGAA +
Preference number: 5 (lower is better)
Translates to: TPAHSFRTPTPSSSGRNTYMPLA*PLERNE
Trigger: TTCATTTCTTTCTAGGGGCAATGCAAGTGGCATGTA...TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp ATACAGGCACAATCTGTCATTCCACGAGATAACTGGAAAAGTCTCCAAAGTCAGGCCAAGATCGTGCCATaGCACTCCGGCCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: IQAQSVIPRDNWKSLQSQAKIVP*HSGLGK
Trigger: TTTGCCCAGGCCGGAGTGCAATGGCACGATCTTGGC...CTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCTGTGCCAGATCCCAGTaGAGTCATGATAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGCARSQ*SHDRLG
Trigger: GCCCAGCCTATCATGACTCAACTGGGATCTGGCACA...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCAGCCCCAAGTGGTCTTaGGCAGCAAATGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGSPKWS*AANEQA
Trigger: TGCCTGCTCATTTGCTGCCAAAGACCACTTGGGGCT...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAAACCTTGATCTTGGACTaGCCAGCCTCCTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SQCIARKCSGNVPWRSQETLILD*PASWAV
Trigger: CACTGCCCAGGAGGCTGGCAAGTCCAAGATCAAGGT...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CAA 90 bp CTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTGAAGAAACTCTTGGTCATCAGCCAGGTCATGGTTaGAATGTATTGCTCCGTGTT +
Preference number: 5 (lower is better)
Translates to: LVCAEQASKLGIEETLGHQPGHG*NVLLRV
Trigger: AACACGGAGCAATACATTCAAACCATGACCTGGCTG...ATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CAA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCAGGCACGAAAATTGCTaGAACCTGGGAGGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGRHENC*NLGGKR
Trigger: CCTCTTGCCTCCCAGGTTCAAGCAATTTTCGTGCCT...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS TCA 90 bp AACAGTGAACTTCCCTACAGCCTCATTCTGAACGCTCCTTCTCCCTaGATGCCTCATACACTGTCCATACTCCTTGACACAATGGACAGT +
Preference number: 5 (lower is better)
Translates to: NSELPYSLILNAPSP*MPHTLSILLDTMDS
Trigger: ACTGTCCATTGTGTCAAGGAGTATGGACAGTGTATGAGGCATTCAGGGAGAAGGAGCGTTCAGAATGAGGCTGTAGGGAAGTTCACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465502.1
CDS-3UTR CAA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATCTGGACATGGCTAAGTaGTGGTGGCCATCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHLDMAK*WWPSSS
Trigger: GGAGGAAGATGGCCACCACAACTTAGCCATGTCCAG...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp GACACCGAGCAGTTCTGGGCGCAACACACACCCATTAAGTGTCAGCCTCCAATACAATGTCTGCTTCAATaGCTCTGTACATTATTCCTT +
Preference number: 5 (lower is better)
Translates to: DTEQFWAQHTPIKCQPPIQCLLQ*LCTLFL
Trigger: AAGGAATAATGTACAGAGCAATTGAAGCAGACATTG...TATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp CTGGTCTGTGCGGAACAGGCTTCCAAACTGGGCATTGAAGAAACTCTTGGTCATCTTCCAAACTGGGCATaGAAGAAACTCTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: LVCAEQASKLGIEETLGHLPNWA*KKLLVI
Trigger: AATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAG...ATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CAA 90 bp GTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATGGAAATGACCAGTTTTGCCCTTGGCTACTaGGCCTGGGCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VSTVLHTCVYIIFMEMTSFALGY*AWASCR
Trigger: CCTGCAGGAGGCCCAGGCCAAGTAGCCAAGGGCAAA...ACTGGTCATTTCCATGAAGATTATATAGACACACGTATGTAAGACTGTACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CAA 90 bp ATGCAGGTGCAATTAAGGATTCTTCCCTCCAACAAAAGGAATACATGCCACTTGGCTGAGGCACGAAAATaGCTTGAACCTGGGAGGCAA +
Preference number: 5 (lower is better)
Translates to: MQVQLRILPSNKRNTCHLAEARK*LEPGRQ
Trigger: TTGCCTCCCAGGTTCAAGCAATTTTCGTGCCTCAGC...CAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS GCA 90 bp AAGAAAGTTTCAGTTCTGGAAATAATTGCCGTGAGTCACAACCCCTaGAGAAACACTAGGTCTGGAATCATTAACCATGGTCGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: KKVSVLEIIAVSHNP*RNTRSGIINHGRQV
Trigger: GACCTGGCGACCATGGTTAATGATTCCAGACCTAGTGTTTCTGCAGGGGTTGTGACTCACGGCAATTATTTCCAGAACTGAAACTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CAA 90 bp TGCAGTTCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTTTAGTACCAAATGATTaGGGAACTGGCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: CSSQCIARKCSGNVPWRSLVPND*GTGHHL
Trigger: CAGGTGATGGCCAGTTCCCAAATCATTTGGTACTAA...ACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS-3UTR CAA 90 bp AAGCTTGACCTGCTAGAATACAGACATGGCATCAAGTGGTCTCACCTATCCCAGCATGGAATGCCAGACTaGGATTTCATCAATAGATGG +
Preference number: 5 (lower is better)
Translates to: KLDLLEYRHGIKWSHLSQHGMPD*DFINRW
Trigger: CCATCTATTGATGAAATCCAAGTCTGGCATTCCATG...CTGGGATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp TATAAGGTTATTCATCTGCATGTTCTCAGCAAGGGAATCTTGCCATTGCCGCCAAAGGGAATCTTGCCATaGCCGCCAACACAATCCATT +
Preference number: 5 (lower is better)
Translates to: YKVIHLHVLSKGILPLPPKGILP*PPTQSI
Trigger: AATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTT...TGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp TTGCACCAGTCCTCCAGCCATGCTTTAGGGTCAAATCTTTTTGATGGTAATGGTAAGCTACTGGGGCTATaGGTGATGAGAAACATCTTC +
Preference number: 5 (lower is better)
Translates to: LHQSSSHALGSNLFDGNGKLLGL*VMRNIF
Trigger: GAAGATGTTTCTCATCACCAATAGCCCCAGTAGCTT...ACCATTACCATCAAAAAGATTTGACCCTAAAGCATGGCTGGAGGACTGGTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CAA 90 bp TCCTTCCTTTCCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGCATCTCTGTATAAATTACCCTGCTaGTATATCTGGCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: SFLSFFHSCKTSCDSASLYKLPC*YIWPFC
Trigger: GCAGAAAGGCCAGATATACAAGCAGGGTAATTTATA...CAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGAAAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS-3UTR CAA 90 bp CCTTTTTCCACTCCTGCAAAACCAGCTGTGACTCAGCATCTCTGTGAACCTGCATTAATTAAAACCTATTaGGCCCCAGCCTTTGATCAT +
Preference number: 5 (lower is better)
Translates to: PFSTPAKPAVTQHLCEPALIKTY*APAFDH
Trigger: ATGATCAAAGGCTGGGGCCAAATAGGTTTTAATTAA...TGCAGGTTCACAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS TCA 90 bp GAACGCTCCTTCTCCCTGAATGCCTCATACACTGTCCATACTCCTTaGCACAATGGACAGTGTATATACAAGAAACAAGGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: ERSFSLNASYTVHTP*HNGQCIYKKQGNSS
Trigger: AGAAGAATTGCCTTGTTTCTTGTATATACACTGTCCATTGTGTCAAGGAGTATGGACAGTGTATGAGGCATTCAGGGAGAAGGAGCGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465502.1
CDS CCA 90 bp TACTGCCCGCTGTACATCATAATGAAGTCCACGAATTGCAAAATTTaGGTCATACTCATACTTCCTGATTTCTGCTGGATACCGGTGTTC +
Preference number: 5 (lower is better)
Translates to: YCPLYIIMKSTNCKI*VILILPDFCWIPVF
Trigger: GAACACCGGTATCCAGCAGAAATCAGGAAGTATGAGTATGACCCAAATTTTGCAATTCGTGGACTTCATTATGATGTACAGCGGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS TCA 90 bp GAGAAGGTCCCGTGCAGCATTAAATATCAGCGTGTGGAGGTGCTTTaGATAAAACACCAAGGTGTAATCATAATCGAAGCCATAGATTTC +
Preference number: 5 (lower is better)
Translates to: EKVPCSIKYQRVEVL*IKHQGVIIIEAIDF
Trigger: GAAATCTATGGCTTCGATTATGATTACACCTTGGTGTTTTATTCAAAGCACCTCCACACGCTGATATTTAATGCTGCACGGGACCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS CCA 90 bp CTTCTCCCTGAATGCCTCATACACTGTCCATACTCCTTGACACAATaGACAGTGTATATACAAGAAACAAGGCAATTCTTCTCCTGTGAA +
Preference number: 5 (lower is better)
Translates to: LLPECLIHCPYSLTQ*TVYIQETRQFFSCE
Trigger: TTCACAGGAGAAGAATTGCCTTGTTTCTTGTATATACACTGTCCATTGTGTCAAGGAGTATGGACAGTGTATGAGGCATTCAGGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465502.1
CDS-3UTR CAA 90 bp AATAATAAAGTGGGATGTGCCTCCATCGTTCACATGGGAATGACTGTGTTCGGCAATGAAGTCCACGAATaGCAAAATTTGGGTCATACT +
Preference number: 5 (lower is better)
Translates to: NNKVGCASIVHMGMTVFGNEVHE*QNLGHT
Trigger: AGTATGACCCAAATTTTGCAATTCGTGGACTTCATT...GCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp TCCCAATGCATAGCCCGTAAATGTTCAGGAAATGTTCCATGGAGGAGTCAAGAACTGTACATTATTCCTTaGATGTGGACGTCTCGAATT +
Preference number: 5 (lower is better)
Translates to: SQCIARKCSGNVPWRSQELYIIP*MWTSRI
Trigger: AATTCGAGACGTCCACATCAAAGGAATAATGTACAG...TTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGACTTCCAAACTGGGCATaGAAGAAACTCTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRLPNWA*KKLLVI
Trigger: AATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAG...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGTGCTTAAAAGGCCTTTaGAGAAGAGGACAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLCLKGL*RRGQKK
Trigger: TTTCTTCTGTCCTCTTCTCAAAAGGCCTTTTAAGCA...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp CTACACAAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGATATAAATTACCCTGCTaGTATATCTGGCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LHKLPNSRTNITGVKSKRYKLPC*YIWPFC
Trigger: GCAGAAAGGCCAGATATACAAGCAGGGTAATTTATA...TCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp ATGCAGGTGCAATTAAGGATTCTTCCCTCCAACAAAAGGAATACATGCCACTTGCATGGTTTGAATGTATaGCTCCGTGTTCATGATTTT +
Preference number: 5 (lower is better)
Translates to: MQVQLRILPSNKRNTCHLHGLNV*LRVHDF
Trigger: AAAATCATGAACACGGAGCAATACATTCAAACCATG...CAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AAATGTAGAAGATGGGGAGAAGCCTTATTGGATCTAAAGGGTCACCTTCACCATACAGATTCATTTCCCTaGTACCAATATGCATTCATC +
Preference number: 5 (lower is better)
Translates to: KCRRWGEALLDLKGHLHHTDSFP*YQYAFI
Trigger: GATGAATGCATATTGGTACAAGGGAAATGAATCTGT...ATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp AAACTCCCAAATAGTCGCACAAACATCACAGGAGTGAAATCTAAGAGAAGGCTGGAAAAGCCACTTAGTTaGCCCAAAGCTAAATTAACT +
Preference number: 5 (lower is better)
Translates to: KLPNSRTNITGVKSKRRLEKPLS*PKAKLT
Trigger: AGTTAATTTAGCTTTGGGCAAACTAAGTGGCTTTTC...CAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS-3UTR CAA 90 bp GTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATGGAAATGACCAGTCTTCCAAACTGGGCATaGAAGAAACTCTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: VSTVLHTCVYIIFMEMTSLPNWA*KKLLVI
Trigger: AATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAG...ACTGGTCATTTCCATGAAGATTATATAGACACACGTATGTAAGACTGTACTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS-3UTR CAA 90 bp GTAAGTACAGTCTTACATACGTGTGTCTATATAATCTTCATGGAAATGACCAGTAACACCACAAATGTTTaGGTTCTTCAAACCCACTCG +
Preference number: 5 (lower is better)
Translates to: VSTVLHTCVYIIFMEMTSNTTNV*VLQTHS
Trigger: CGAGTGGGTTTGAAGAACCAAAACATTTGTGGTGTT...ACTGGTCATTTCCATGAAGATTATATAGACACACGTATGTAAGACTGTACTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447799.5
CDS GCA 72 bp CCTCGCCCCGGCCCCGCGTGCCACCACCGCCGCCGCTaGCATGGTCATGCCTGCTGCCTGCTGCCGCCACCG +
Preference number: 6 (lower is better)
Translates to: PRPGPACHHRRR*HGHACCLLPPP
Trigger: CGGTGGCGGCAGCAGGCAGCAGGCATGACCATGGCAGCGGCGGCGGTGGTGGCACGCGGGGCCGGGGCGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS GCA 72 bp CTGCTGCCTGCTGCCGCCACCGCCGCCGCGCCGCTCTaGGACTGCTGCTGCCCGGCCCAAGATCTACCCGCG +
Preference number: 6 (lower is better)
Translates to: LLPAAATAAAPL*DCCCPAQDLPA
Trigger: CGCGGGTAGATCTTGGGCCGGGCAGCAGCAGTCGCAGAGCGGCGCGGCGGCGGTGGCGGCAGCAGGCAGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS CAA 72 bp TGTCAGCGAAGCGCGACAGGCGCCTTAGGAAGTAGGTaGGGTTCTGGTCTGTGCGGAACAGGCTTCCAAACT +
Preference number: 6 (lower is better)
Translates to: CQRSATGALGSR*GSGLCGTGFQT
Trigger: AGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCTACTTCCTAAGGCGCCTGTCGCGCTTCGCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS CAA 72 bp GGGCAGTTACAGTTTCTAGTTTTTGCCCTTGGCTACTaGGCCTGGGCCTCCTGCAGGAGAGGGGTTCCGAAG +
Preference number: 6 (lower is better)
Translates to: GQLQFLVFALGY*AWASCRRGVPK
Trigger: CTTCGGAACCCCTCTCCTGCAGGAGGCCCAGGCCAAGTAGCCAAGGGCAAAAACTAGAAACTGTAACTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000447799.5
CDS TCA 72 bp GGCCTCTCAACACCCTTCTCAGCAGCGATGCAACAGTaGACTTCCCTACAGCCTCATTCTGAACGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GLSTPFSAAMQQ*TSLQPHSERSF
Trigger: GAAGGAGCGTTCAGAATGAGGCTGTAGGGAAGTTCACTGTTGCATCGCTGCTGAGAAGGGTGTTGAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465502.1
CDS CCA 72 bp GATTTCAAGAAGCAGAGAGGAAGGAAAACTGCACGCTaGCAGAACACCAGCAGGAGCAAATGCCAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: DFKKQRGRKTAR*QNTSRSKCQVA
Trigger: TGCCACCTGGCATTTGCTCCTGCTGGTGTTCTGCCAGCGTGCAGTTTTCCTTCCTCTCTGCTTCTTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465502.1
CDS GCA 72 bp CATCTTCTTGCCATGATCAGCCAGTTTGGCCAACACTaGGCGGGTCTGCTCAGCATAGCAGATGTACTTTTC +
Preference number: 6 (lower is better)
Translates to: HLLAMISQFGQH*AGLLSIADVLF
Trigger: GAAAAGTACATCTGCTATGCTGAGCAGACCCGCGCAGTGTTGGCCAAACTGGCTGATCATGGCAAGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS GCA 72 bp CTCAACTCTGGGATGATTGCACCAGTCCTCCAGCCATaGTTTAGGGTCAAATCCGCCAGGTCACTGTATATA +
Preference number: 6 (lower is better)
Translates to: LNSGMIAPVLQP*FRVKSARSLYI
Trigger: TATATACAGTGACCTGGCGGATTTGACCCTAAAGCATGGCTGGAGGACTGGTGCAATCATCCCAGAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS TCA 72 bp TGTACAGATGCACAGGCTCATAGTCGATGTTGTTCTTaGGGAAGTATTCATTCACGCAGGACAGGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: CTDAQAHSRCCS*GSIHSRRTGGS
Trigger: TGACCCTCCTGTCCTGCGTGAATGAATACTTCCTCAAGAACAACATCGACTATGAGCCTGTGCATCTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392876.8
ENST00000465502.1
CDS GCA 72 bp TCAGTTCTGGAAATAATTGCCGTGAGTCACAACCCCTaGAGAAACACTAGGTCTGGAATCATTAACCATGGT +
Preference number: 6 (lower is better)
Translates to: SVLEIIAVSHNP*RNTRSGIINHG
Trigger: ACCATGGTTAATGATTCCAGACCTAGTGTTTCTGCAGGGGTTGTGACTCACGGCAATTATTTCCAGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415849.1
CDS TCA 72 bp CCGTGCAGCATTAAATATCAGCGTGTGGAGGTGCTTTaGATAAAACACCAAGGTGTAATCATAATCGAAGCC +
Preference number: 6 (lower is better)
Translates to: PCSIKYQRVEVL*IKHQGVIIIEA
Trigger: GGCTTCGATTATGATTACACCTTGGTGTTTTATTCAAAGCACCTCCACACGCTGATATTTAATGCTGCACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS TCA 72 bp TTCTCCCTGAATGCCTCATACACTGTCCATACTCCTTaGCACAATGGACAGTGTATATACAAGAAACAAGGC +
Preference number: 6 (lower is better)
Translates to: FSLNASYTVHTP*HNGQCIYKKQG
Trigger: GCCTTGTTTCTTGTATATACACTGTCCATTGTGTCAAGGAGTATGGACAGTGTATGAGGCATTCAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465502.1
CDS CCA 72 bp GAATGCCTCATACACTGTCCATACTCCTTGACACAATaGACAGTGTATATACAAGAAACAAGGCAATTCTTC +
Preference number: 6 (lower is better)
Translates to: ECLIHCPYSLTQ*TVYIQETRQFF
Trigger: GAAGAATTGCCTTGTTTCTTGTATATACACTGTCCATTGTGTCAAGGAGTATGGACAGTGTATGAGGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465502.1
CDS CCA 72 bp TCTGCTTCAATTGCTCTGTACATTATTCCTTTGATGTaGACGTCTCGAATTGAATCCTTGACATCTTTGTAC +
Preference number: 6 (lower is better)
Translates to: SASIALYIIPLM*TSRIESLTSLY
Trigger: GTACAAAGATGTCAAGGATTCAATTCGAGACGTCCACATCAAAGGAATAATGTACAGAGCAATTGAAGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS CAA 72 bp TCAATGTCTGCTTCAATTGCTCTGTACATTATTCCTTaGATGTGGACGTCTCGAATTGAATCCTTGACATCT +
Preference number: 6 (lower is better)
Translates to: SMSASIALYIIP*MWTSRIESLTS
Trigger: AGATGTCAAGGATTCAATTCGAGACGTCCACATCAAAGGAATAATGTACAGAGCAATTGAAGCAGACATTGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392876.8
CDS CAA 90 bp ATGTACTTTTCAATGTCTGCTTCAATTGCTCTGTACATTATTCCTTaGATGTGGACGTCTCGAATTGAATCCTTGACATCTTTGTACAGA +
Preference number: 6 (lower is better)
Translates to: MYFSMSASIALYIIP*MWTSRIESLTSLYR
Trigger: TCTGTACAAAGATGTCAAGGATTCAATTCGAGACGTCCACATCAAAGGAATAATGTACAGAGCAATTGAAGCAGACATTGAAAAGTACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392876.8