Pregenerated sensors for NT5C3A (Homo sapiens)
Ensembl gene IDs: ENSG00000122643Ensembl transcript IDs: ENST00000409467.6, ENST00000449201.5, ENST00000456458.5, ENST00000497542.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCGAAGAAGGCTGGTTTCTGCATTTTCACATGTACGGCAGACTCTTaGTTAGTCATTTCTTGGTTATCCAATCTTCCTGAAGGTAACCGG | + |
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Preference number: 5 (lower is better) Translates to: SKKAGFCIFTCTADS*LVISWLSNLPEGNR Trigger: CCGGTTACCTTCAGGAAGATTGGATAACCAAGAAATGACTAATCAAGAGTCTGCCGTACATGTGAAAATGCAGAAACCAGCCTTCTTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409467.6 |
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| CDS TCA 90 bp | GAAGGCTGGTTTCTGCTACACATTTTCACATGTACGGCAGACTCTTaGTTAGTCATTTCTTGGTTATCCAATCTTCCTGAAGGTAACCGG | + |
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Preference number: 5 (lower is better) Translates to: EGWFLLHIFTCTADS*LVISWLSNLPEGNR Trigger: CCGGTTACCTTCAGGAAGATTGGATAACCAAGAAATGACTAATCAAGAGTCTGCCGTACATGTGAAAATGTGTAGCAGAAACCAGCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449201.5 ENST00000497542.1 |
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| CDS GCA 90 bp | AACCCATTCACTCGCCTAACCAATATTTACCATGTGTCTACTTTGTaGCACACACTCTTGCTAAATGCTAGGGATATGATGATGAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: NPFTRLTNIYHVSTL*HTLLLNARDMMMSS Trigger: ACTACTCATCATCATATCCCTAGCATTTAGCAAGAGTGTGTGGCACAAAGTAGACACATGGTAAATATTGGTTAGGCGAGTGAATGGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497542.1 |
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| CDS TCA 90 bp | TTCTGTAACTCCCTTACAAATACCTCAGCTAGTAAGTTTATCTCTTaGCAACTAATTTCTGTTCTTACCTCAGCCTTAACTGGCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: FCNSLTNTSASKFIS*QLISVLTSALTGRC Trigger: GCATCTGCCAGTTAAGGCTGAGGTAAGAACAGAAATTAGTTGTCAAGAGATAAACTTACTAGCTGAGGTATTTGTAAGGGAGTTACAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497542.1 |
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| CDS CAA 90 bp | TTTTCTGGAATTCTGGCATCTCAGGCAAATCACAGCTTCAAGTTTTaGATAACGGATAGGAGAATCACACCAAGACCACTTCGAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: FSGILASQANHSFKF*ITDRRITPRPLRRR Trigger: CCTTCTTCGAAGTGGTCTTGGTGTGATTCTCCTATCCGTTATCAAAAACTTGAAGCTGTGATTTGCCTGAGATGCCAGAATTCCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409467.6 ENST00000449201.5 |
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| CDS GCA 72 bp | ACTCGCCTAACCAATATTTACCATGTGTCTACTTTGTaGCACACACTCTTGCTAAATGCTAGGGATATGATG | + |
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Preference number: 6 (lower is better) Translates to: TRLTNIYHVSTL*HTLLLNARDMM Trigger: CATCATATCCCTAGCATTTAGCAAGAGTGTGTGGCACAAAGTAGACACATGGTAAATATTGGTTAGGCGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497542.1 |
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| CDS CAA 72 bp | TTCACTCGCCTAACCAATATTTACCATGTGTCTACTTaGTGCCACACACTCTTGCTAAATGCTAGGGATATG | + |
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Preference number: 6 (lower is better) Translates to: FTRLTNIYHVST*CHTLLLNARDM Trigger: CATATCCCTAGCATTTAGCAAGAGTGTGTGGCACAAAGTAGACACATGGTAAATATTGGTTAGGCGAGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497542.1 |
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| CDS CAA 90 bp | ATTAACCCATTCACTCGCCTAACCAATATTTACCATGTGTCTACTTaGTGCCACACACTCTTGCTAAATGCTAGGGATATGATGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: INPFTRLTNIYHVST*CHTLLLNARDMMMS Trigger: ACTCATCATCATATCCCTAGCATTTAGCAAGAGTGTGTGGCACAAAGTAGACACATGGTAAATATTGGTTAGGCGAGTGAATGGGTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497542.1 |
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| CDS CCA 72 bp | TTGACAACTAATTTCTGTTCTTACCTCAGCCTTAACTaGCAGATGCACAGCAATCAGCATATGTTTGATTCA | + |
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Preference number: 6 (lower is better) Translates to: LTTNFCSYLSLN*QMHSNQHMFDS Trigger: TGAATCAAACATATGCTGATTGCTGTGCATCTGCCAGTTAAGGCTGAGGTAAGAACAGAAATTAGTTGTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497542.1 |
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| CDS TCA 72 bp | TTTCTGCTACACATTTTCACATGTACGGCAGACTCTTaGTTAGTCATTTCTTGGTTATCCAATCTTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FLLHIFTCTADS*LVISWLSNLPE Trigger: TTCAGGAAGATTGGATAACCAAGAAATGACTAATCAAGAGTCTGCCGTACATGTGAAAATGTGTAGCAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449201.5 ENST00000497542.1 |
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| CDS CAA 72 bp | GAATTCTGGCATCATTTTCACATGTACGGCAGACTCTaGATTAGTCATTTCTTGGTTATCCAATCTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: EFWHHFHMYGRL*ISHFLVIQSSS Trigger: AGATGAAGATTGGATAACCAAGAAATGACTAATCAAGAGTCTGCCGTACATGTGAAAATGATGCCAGAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456458.5 |
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| CDS TCA 72 bp | TCCCTTACAAATACCTCAGCTAGTAAGTTTATCTCTTaGCAACTAATTTCTGTTCTTACCTCAGCCTTAACT | + |
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Preference number: 6 (lower is better) Translates to: SLTNTSASKFIS*QLISVLTSALT Trigger: AGTTAAGGCTGAGGTAAGAACAGAAATTAGTTGTCAAGAGATAAACTTACTAGCTGAGGTATTTGTAAGGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497542.1 |
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