RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NT5C (Homo sapiens)

Ensembl gene IDs: ENSG00000125458

Ensembl transcript IDs: ENST00000245552.7, ENST00000577523.5, ENST00000578095.1, ENST00000578337.1, ENST00000578407.5, ENST00000579023.5, ENST00000579082.1, ENST00000580423.5, ENST00000580758.5, ENST00000582160.5, ENST00000582170.1, ENST00000582744.5, ENST00000583655.5, ENST00000584352.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTGGCTGGGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTaGCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGC +
Preference number: 1 (lower is better)
Translates to: GWLGLGPGSTALNGI*LLHSTGPEAPARCR
Trigger: GCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAGCCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR CCA 90 bp CAGGGTCCAGGGACAGCCTCTCGGGAGGTACCGGGTGGCTGGGCCTaGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACT +
Preference number: 1 (lower is better)
Translates to: QGPGTASREVPGGWA*GPVAQRLTVSACST
Trigger: AGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGAGAGGCTGTCCCTGGACCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR CCA 90 bp TGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTaGAGGCTGCCAAGGATAACGGGTCCAACCTCGAACTGTGTCCTT +
Preference number: 1 (lower is better)
Translates to: WVLLLPLPNPGRPEA*RLPRITGPTSNCVL
Trigger: AAGGACACAGTTCGAGGTTGGACCCGTTATCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
3UTR-3UTR GCA 90 bp CTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: LHGARGTSTMPPRLGSAVAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...CACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp CAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCTTTCGGGAGGTACCGGGTaGCTGGGCCTGGGGCCCGGT +
Preference number: 2 (lower is better)
Translates to: QHDAAPTRLCGGPCGPALSGGTG*LGLGPG
Trigger: ACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGA...AAGGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp GCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 2 (lower is better)
Translates to: APARCRPDSALRWPLWACLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...GCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp CCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 2 (lower is better)
Translates to: PLHGARGTSTMPPRLGSASFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...CGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp AGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 2 (lower is better)
Translates to: RGTSTMPPRLGSAVAPVGSFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...GCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp CACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 2 (lower is better)
Translates to: HSTGPEAPARCRPDSALRSFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...CCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp ACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCTGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: TSTMPPRLGSAVAPVGLPWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...GGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp ACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: TVSACSTPRGQRHQHDAAAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...GGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp CACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 2 (lower is better)
Translates to: HSTGPEAPARCRPDSALRLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...CCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp CTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 2 (lower is better)
Translates to: LHGARGTSTMPPRLGSAVLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...CACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp CTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 2 (lower is better)
Translates to: LHSTGPEAPARCRPDSALSFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp GCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 2 (lower is better)
Translates to: APLHGARGTSTMPPRLGSSFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...AGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp AACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: NGICLLHSTGPEAPARCRAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...GCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp GGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: GPVAQRLTVSACSTPRGQAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp TATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGAGAGGTACCGGGTGGCTaGGCCTGGGGCCCGGTAGCA +
Preference number: 2 (lower is better)
Translates to: YLPAPLHGARGTSTMPPREVPGG*AWGPVA
Trigger: TGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTC...TCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp TGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: CSTPRGQRHQHDAAPTRLWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...GAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp CACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGATTCGTTCTACGAACTaGGGCCCCAGGTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: HSTGPEAPARCRPDSALRIRSTN*GPRCCS
Trigger: GGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAAT...CCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp CTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGTGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LGPGSTALNGICLLHSTGWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp CTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCGAGGCACCAGCACGATaGCGCCCCGACTCGGCTCTG +
Preference number: 2 (lower is better)
Translates to: LNGICLLHSTGPEAPARCEAPAR*RPDSAL
Trigger: CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTC...GCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp CAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCTTACCAGGTGCCGATTGTaGCAGCAGGTGAACAAGATG +
Preference number: 2 (lower is better)
Translates to: QHDAAPTRLCGGPCGPALTRCRL*QQVNKM
Trigger: CATCTTGTTCACCTGCTGCCACAATCGGCACCTGGT...AAGGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp TATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGATTAACGGTATCTGCCTaGTCCACTCCACGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: YLPAPLHGARGTSTMPPRLTVSA*STPRGQ
Trigger: CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA...TCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp TATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACCCACTGTATTTCCATaGCAGCCAGGGTCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: YLPAPLHGARGTSTMPPRPTVFP*QPGSRD
Trigger: GTCCCTGGACCCTGGCTGGCATGGAAATACAGTGGG...TCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
3UTR-3UTR GCA 90 bp CAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACTTTAGCTCCAGCTGCTaGCCGCGGCATCCCCGCTCA +
Preference number: 2 (lower is better)
Translates to: QRLTVSACSTPRGQRHQHFSSSC*PRHPRS
Trigger: TGAGCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAA...GTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580423.5
ENST00000580758.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp CGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 2 (lower is better)
Translates to: RLTVSACSTPRGQRHQHDLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...ATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp AGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCATGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: STALNGICLLHSTGPEAPWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...TGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp TTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCTGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LTVSACSTPRGQRHQHDAWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...GGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp TCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGACCCAGCGGTACTTCTaGGTTTCTGGTGGTTTCTTT +
Preference number: 2 (lower is better)
Translates to: STGPEAPARCRPDSALRWTQRYF*VSGGFF
Trigger: AAAGAAACCACCAGAAACCCAGAAGTACCGCTGGGT...CCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR-3UTR GCA 90 bp CCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGCCCACTGTATTTCCATaGCAGCCAGGGTCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: PGSTALNGICLLHSTGPEPTVFP*QPGSRD
Trigger: GTCCCTGGACCCTGGCTGGCATGGAAATACAGTGGG...CTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
3UTR-3UTR CCA 90 bp GGTGGCTGGGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACCCAGCGGTACTTCTaGGTTTCTGGTGGTTTCTTT +
Preference number: 2 (lower is better)
Translates to: GGWAWGPVAQRLTVSACSTQRYF*VSGGFF
Trigger: AAAGAAACCACCAGAAACCCAGAAGTACCGCTGGGT...GGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR-3UTR CCA 90 bp CTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTGGAGGCTGCCAAGGATAACGACCCAGCGGTACTTCTaGGTTTCTGGTGGTTTCTTT +
Preference number: 2 (lower is better)
Translates to: LPLPNPGRPEAWRLPRITTQRYF*VSGGFF
Trigger: AAAGAAACCACCAGAAACCCAGAAGTACCGCTGGGT...CGTTATCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
3UTR-3UTR CCA 90 bp TCCTGGCCTAGGACAGTGAAAGACAGCGCGCTGCCATCTGTCATGGGTATTATTATTCGTTCTACGAACTaGGGCCCCAGGTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SWPRTVKDSALPSVMGIIIRSTN*GPRCCS
Trigger: GGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAAT...AATAATACCCATGACAGATGGCAGCGCGCTGTCTTTCACTGTCCTAGGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578337.1
3UTR GCA 72 bp CCCCTGTGGGCCTGCCCTTCCTTTAGCTCCAGCTGCTaGCCGCGGCATCCCCGCTCATTCCCGCTGCGCAGC +
Preference number: 3 (lower is better)
Translates to: PLWACPSFSSSC*PRHPRSFPLRS
Trigger: GCTGCGCAGCGGGAATGAGCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580423.5
ENST00000580758.5
ENST00000582744.5
3UTR CCA 72 bp GGGACAGCCTCTCGGGAGGTACCGGGTGGCTGGGCCTaGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCC +
Preference number: 3 (lower is better)
Translates to: GTASREVPGGWA*GPVAQRLTVSA
Trigger: GGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGAGAGGCTGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR CCA 72 bp GGTCCAGGGACAGCCTCTCGGGAGGTACCGGGTGGCTaGGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTA +
Preference number: 3 (lower is better)
Translates to: GPGTASREVPGG*AWGPVAQRLTV
Trigger: TACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGAGAGGCTGTCCCTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR GCA 72 bp GGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTaGCTGCTCCACTCCACGGGGCCAGAGGCACCAGCA +
Preference number: 3 (lower is better)
Translates to: GLGPGSTALNGI*LLHSTGPEAPA
Trigger: TGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR GCA 72 bp CCAGCTGCTGCCCGCGGCATCCCCGCTCATTCCCGCTaGGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTC +
Preference number: 3 (lower is better)
Translates to: PAAARGIPAHSR*AAPRLLSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGCGGGCAGCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR-3UTR CAA 90 bp CAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACAGAGCAGCCGTCTCCTaGTCGGGGGCAGGACCAGGT +
Preference number: 3 (lower is better)
Translates to: QRLTVSACSTPRGQRHQHRAAVS*SGAGPG
Trigger: ACCTGGTCCTGCCCCCGACAAGGAGACGGCTGCTCT...GTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR GCA 72 bp TGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTaGTCCACTCCACGGGGCCAGAGGCACCAGCACGAT +
Preference number: 3 (lower is better)
Translates to: WGPVAQRLTVSA*STPRGQRHQHD
Trigger: ATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
3UTR-3UTR CAA 90 bp GGTGGCTGGGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCTGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTC +
Preference number: 3 (lower is better)
Translates to: GGWAWGPVAQRLTVSACSCAAPR*LSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCA...GGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR-3UTR CAA 90 bp GCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTC +
Preference number: 3 (lower is better)
Translates to: ALNGICLLHSTGPEAPARCAAPR*LSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCA...TCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR GCA 72 bp GCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTaGTATCTAAGATCTCCCTCCAGTTGTCACTCCAGG +
Preference number: 3 (lower is better)
Translates to: ASPLIPAAQLRA*YLRSPSSCHSR
Trigger: CCTGGAGTGACAACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
3UTR CCA 72 bp TTACTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTaGAGGCTGCCAAGGATAACGGGTCCAACCTCGAAC +
Preference number: 3 (lower is better)
Translates to: LLPLPNPGRPEA*RLPRITGPTSN
Trigger: GTTCGAGGTTGGACCCGTTATCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
3UTR TCA 72 bp GCTCCCAGCTTGGGGTCTCCTCCTGGCCTAGGACAGTaGAAGACAGCGCGCTGCCATCTGTCATGGGTATTA +
Preference number: 3 (lower is better)
Translates to: APSLGSPPGLGQ*KTARCHLSWVL
Trigger: TAATACCCATGACAGATGGCAGCGCGCTGTCTTTCACTGTCCTAGGCCAGGAGGAGACCCCAAGCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578337.1
3UTR GCA 72 bp AGGATAATTCGTTCTACGAACTGGGGCCCCAGGTGCTaGTCCACCCAGCGGTACTTCTGGGTTTCTGGTGGT +
Preference number: 3 (lower is better)
Translates to: RIIRSTNWGPRC*STQRYFWVSGG
Trigger: ACCACCAGAAACCCAGAAGTACCGCTGGGTGGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAATTATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578337.1
ENST00000580758.5
ENST00000582744.5
3UTR-3UTR CAA 90 bp GACAGTGAAAGACAGCGCGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCCTCGAACTGTGTCCTaGTCATCAATGAGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: DSERQRAAICHGYYYSLSPRTVS*SSMSRS
Trigger: GGACCTGCTCATTGATGACAAGGACACAGTTCGAGG...GGAGAGGGAGTAATAATACCCATGACAGATGGCAGCGCGCTGTCTTTCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR GCA 90 bp CACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HGARGTSTMPPRLGSAVAAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...GGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp GGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGGAGGTACCGGGTGGCTaGGCCTGGGGCCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GTSTMPPRLGSAVAPVGLEVPGG*AWGPVA
Trigger: TGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTC...CAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp ACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCGAGGTACCGGGTGGCTaGGCCTGGGGCCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: TSTMPPRLGSAVAPVGLPEVPGG*AWGPVA
Trigger: TGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTC...GGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 4 (lower is better)
Translates to: RGQRHQHDAAPTRLCGGPSFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...GGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPAPLHGARGTSTMPPRLAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...GAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCGAGGCACCAGCACGATaGCGCCCCGACTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HGARGTSTMPPRLGSAVAEAPAR*RPDSAL
Trigger: CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTC...GGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCCGCTCATTCCCGCTaGGCAGCTCCGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: APARCRPDSALRWPLWACPAHSR*AAPRLL
Trigger: TAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG...GCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCGCTCATTCCCGCTaGGCAGCTCCGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: PRGQRHQHDAAPTRLCGGPAHSR*AAPRLL
Trigger: TAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG...GCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCCCCGCTCATTCCCGCTaGGCAGCTCCGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: TSTMPPRLGSAVAPVGLPPAHSR*AAPRLL
Trigger: TAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG...GGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp TGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCGAGGTACCGGGTGGCTaGGCCTGGGGCCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CSTPRGQRHQHDAAPTRLEVPGG*AWGPVA
Trigger: TGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTC...GAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCTCGGGAGGTACCGGGTaGCTGGGCCTGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RYLPAPLHGARGTSTMPPSGGTG*LGLGPG
Trigger: ACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGA...GGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCTTGGGGGCAGGACCAGGTaGCGATTGTGGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QHDAAPTRLCGGPCGPALGGRTR*RLWQQV
Trigger: CACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCC...AAGGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCTGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TGPEAPARCRPDSALRWPWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...GGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp GTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGGAGGTACCGGGTGGCTaGGCCTGGGGCCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VSACSTPRGQRHQHDAAPEVPGG*AWGPVA
Trigger: TGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTC...CGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCCCCGCTCATTCCCGCTaGGCAGCTCCGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LPAPLHGARGTSTMPPRLPAHSR*AAPRLL
Trigger: TAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG...GAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 4 (lower is better)
Translates to: LPAPLHGARGTSTMPPRLSFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...GAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGPGSTALNGICLLHSTAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...CGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCGCGCTTAACGGTATCTaGCTGCTCCACTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: TSTMPPRLGSAVAPVGLPALNGI*LLHSTG
Trigger: CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC...GGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LPAPLHGARGTSTMPPRLLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...GAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp TCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: STPRGQRHQHDAAPTRLCLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...GCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp ACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: TPRGQRHQHDAAPTRLCGLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...ACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp TGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCTCGGGAGGTACCGGGTaGCTGGGCCTGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: WGPVAQRLTVSACSTPRGSGGTG*LGLGPG
Trigger: ACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGA...GCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGTCGGGAGGTACCGGGTaGCTGGGCCTGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LGPGSTALNGICLLHSTGSGGTG*LGLGPG
Trigger: ACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGA...CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR TCA 90 bp GCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGGGGGCTGGTGCAGATaGAGACCTGCGTGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: APLHGARGTSTMPPRLGSGGWCR*RPACPV
Trigger: TACCGGACACGCAGGTCTTCATCTGCACCAGCCCCC...AGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp TATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGATGCTCCAGCGGCACGTaGGGCTCCTCAGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: YLPAPLHGARGTSTMPPRCSSGT*GSSGKR
Trigger: CCGCTTCCCTGAGGAGCCGCACGTGCCGCTGGAGCA...TCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR GCA 90 bp ACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCTGCTCCAGCGGCACGTaGGGCTCCTCAGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TVSACSTPRGQRHQHDAACSSGT*GSSGKR
Trigger: CCGCTTCCCTGAGGAGCCGCACGTGCCGCTGGAGCA...GGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR GCA 90 bp CCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGCGCAGGGCGCGGTACTaGTCGCGGGCCAGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PGSTALNGICLLHSTGPERRARY*SRARKP
Trigger: CGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGCG...CTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR GCA 90 bp CGCGGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCCGCAGGGCGCGGTACTaGTCGCGGGCCAGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RGIPAHSRCAAPRLLSKIRRARY*SRARKP
Trigger: CGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGCG...GATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582170.1
CDS-3UTR GCA 90 bp CGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCGGGGGCAGGACCAGGTaGCGATTGTGGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RYLPAPLHGARGTSTMPPGGRTR*RLWQQV
Trigger: CACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCC...GGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCTTTAGCTCCAGCTGCTaGCCGCGGCATCCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LPAPLHGARGTSTMPPRLFSSSC*PRHPRS
Trigger: TGAGCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAA...GAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp TGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTTTAGCTCCAGCTGCTaGCCGCGGCATCCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: CSTPRGQRHQHDAAPTRLFSSSC*PRHPRS
Trigger: TGAGCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAA...GAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp TCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCTGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: STPRGQRHQHDAAPTRLCWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...GCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRLTVSACSTPRGQRHQHAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...GTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTTAACGGTATCTGCCTaGTCCACTCCACGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPEAPARCRPDSALRWPLLTVSA*STPRGQ
Trigger: CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA...CAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCTTAACGGTATCTGCCTaGTCCACTCCACGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRGQRHQHDAAPTRLCGGLTVSA*STPRGQ
Trigger: CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA...GCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp TCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGGCGCTTAACGGTATCTaGCTGCTCCACTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: STGPEAPARCRPDSALRWALNGI*LLHSTG
Trigger: CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC...CCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp GGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGCTTGGGGTCTCCTCCTaGCCTCGAACTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GPEAPARCRPDSALRWPLLGVSS*PRTVSL
Trigger: CAAGGACACAGTTCGAGGCCAGGAGGAGACCCCAAG...CAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACTCGGGAGGTACCGGGTaGCTGGGCCTGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: QRLTVSACSTPRGQRHQHSGGTG*LGLGPG
Trigger: ACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGA...GTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp AGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGATGTGCTCCCAGCTTaGGGTCTCCTCCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RHQHDAAPTRLCGGPCGPDVLPA*GLLLAF
Trigger: GAAGGCCAGGAGGAGACCCCAAGCTGGGAGCACATC...AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580423.5
CDS-3UTR TCA 90 bp CACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HGARGTSTMPPRLGSAVADCGSR*TRCAPS
Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...GGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGAGGAAGCCGCGGCGTTaGTCCAGCGGCACGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PGSTALNGICLLHSTGPERKPRR*SSGTCG
Trigger: GCCGCACGTGCCGCTGGAGCAACGCCGCGGCTTCCT...CTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR GCA 90 bp CGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATCGCAGGGCGCGGTACTaGTCGCGGGCCAGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RLTVSACSTPRGQRHQHDRRARY*SRARKP
Trigger: CGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGCG...ATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR GCA 90 bp CCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCGCGCAGCTCCGCGCTTaGTATCTAAGATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PAPLHGARGTSTMPPRLGAQLRA*YLRSPS
Trigger: GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGC...GCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 4 (lower is better)
Translates to: TVSACSTPRGQRHQHDAASFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...GGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCAGCCCCGACTCGGCTCTaGGGTGGCCCCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TALNGICLLHSTGPEAPAAPTRL*GGPCGP
Trigger: AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGC...TGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGAGGCACCAGCACGATaGCGCCCCGACTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AWGPVAQRLTVSACSTPREAPAR*RPDSAL
Trigger: CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTC...CCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGGAGGCACCAGCACGATaGCGCCCCGACTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGPGSTALNGICLLHSTGEAPAR*RPDSAL
Trigger: CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTC...CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp AGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCTTCTTAACGGTATCTGCCTaGTCCACTCCACGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: STMPPRLGSAVAPVGLPFLTVSA*STPRGQ
Trigger: CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA...GAAGGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTTAACGGTATCTGCCTaGTCCACTCCACGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PAPLHGARGTSTMPPRLGLTVSA*STPRGQ
Trigger: CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA...GCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCTTCCCACTGTATTTCCATaGCAGCCAGGGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QHDAAPTRLCGGPCGPALPTVFP*QPGSRD
Trigger: GTCCCTGGACCCTGGCTGGCATGGAAATACAGTGGG...AAGGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
CDS-3UTR CCA 90 bp CCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCGGGCTTCGTACACACTaGCCACTTTATCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PRGQRHQHDAAPTRLCGGGLRTH*PLYPPG
Trigger: ACCTGGCGGATAAAGTGGCCAGTGTGTACGAAGCCC...GCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR CCA 90 bp CTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGATTCGTTCTACGAACTaGGGCCCCAGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LHGARGTSTMPPRLGSAVIRSTN*GPRCCS
Trigger: GGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAAT...CACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp AGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCATTCGTTCTACGAACTaGGGCCCCAGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RGTSTMPPRLGSAVAPVGIRSTN*GPRCCS
Trigger: GGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAAT...GCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp TCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCTTGGGGTCTCCTCCTaGCCTCGAACTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: STGPEAPARCRPDSALRWLGVSS*PRTVSL
Trigger: CAAGGACACAGTTCGAGGCCAGGAGGAGACCCCAAG...CCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGCTTGGGGTCTCCTCCTaGCCTCGAACTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LHGARGTSTMPPRLGSAVLGVSS*PRTVSL
Trigger: CAAGGACACAGTTCGAGGCCAGGAGGAGACCCCAAG...CACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCTCGGGAGGTACCGGGTaGCTGGGCCTGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LNGICLLHSTGPEAPARCSGGTG*LGLGPG
Trigger: ACCGGGCCCCAGGCCCAGCCACCCGGTACCTCCCGA...GCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCGATGTGCTCCCAGCTTaGGGTCTCCTCCTTCTCACC +
Preference number: 4 (lower is better)
Translates to: PAPLHGARGTSTMPPRLGDVLPA*GLLLLT
Trigger: GGTGAGAAGGAGGAGACCCCAAGCTGGGAGCACATC...GCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578407.5
CDS-3UTR TCA 90 bp AGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RHQHDAAPTRLCGGPCGPDCGSR*TRCAPS
Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR TCA 90 bp CCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PLHGARGTSTMPPRLGSADCGSR*TRCAPS
Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...CGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGGGGGGCAGGACCAGGTaGCGATTGTGGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LGPGSTALNGICLLHSTGGGRTR*RLWQQV
Trigger: CACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCC...CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAG
67% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGGGGGCAGGACCAGGTaGCGATTGTGGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GPGSTALNGICLLHSTGPGGRTR*RLWQQV
Trigger: CACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCC...TGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGCGCAGCTCCGCGCTTaGTATCTAAGATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TPRGQRHQHDAAPTRLCGAQLRA*YLRSPS
Trigger: GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGC...ACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGCCCGCTCATTCCCGCTaGGCAGCTCCGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: AWGPVAQRLTVSACSTPRPAHSR*AAPRLL
Trigger: TAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG...CCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CCCGCGGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 4 (lower is better)
Translates to: PAASPLIPAAQLRACYLRSFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...TCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR GCA 90 bp TATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGATGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YLPAPLHGARGTSTMPPRWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...TCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTTTAACGGTATCTGCCTaGTCCACTCCACGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: APLHGARGTSTMPPRLGSLTVSA*STPRGQ
Trigger: CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA...AGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp GCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTATTCGTTCTACGAACTaGGGCCCCAGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: APLHGARGTSTMPPRLGSIRSTN*GPRCCS
Trigger: GGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAAT...AGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp TCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCCTTGGGGTCTCCTCCTaGCCTCGAACTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: STPRGQRHQHDAAPTRLCLGVSS*PRTVSL
Trigger: CAAGGACACAGTTCGAGGCCAGGAGGAGACCCCAAG...GCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCACCAGGTGCCGATTGTaGCAGCAGGTGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: HGARGTSTMPPRLGSAVATRCRL*QQVNKM
Trigger: CATCTTGTTCACCTGCTGCCACAATCGGCACCTGGT...GGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp GTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACGAGGTACCGGGTGGCTaGGCCTGGGGCCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VAQRLTVSACSTPRGQRHEVPGG*AWGPVA
Trigger: TGCTACCGGGCCCCAGGCCCAGCCACCCGGTACCTC...GTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACTGCTCCAGCGGCACGTaGGGCTCCTCAGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: VAQRLTVSACSTPRGQRHCSSGT*GSSGKR
Trigger: CCGCTTCCCTGAGGAGCCGCACGTGCCGCTGGAGCA...GTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR GCA 90 bp GCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGTTGCGCAGGGCGCGGTACTaGTCGCGGGCCAGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: AHSRCAAPRLLSKISLQLRRARY*SRARKP
Trigger: CGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGCG...CAACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582170.1
CDS-3UTR GCA 90 bp GCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGTTTAGCTCCAGCTGCTaGCCGCGGCATCCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AWGPVAQRLTVSACSTPRFSSSC*PRHPRS
Trigger: TGAGCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAA...CCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 4 (lower is better)
Translates to: PGSTALNGICLLHSTGPESFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...CTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGTGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AWGPVAQRLTVSACSTPRWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...CCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGTGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGPGSTALNGICLLHSTWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...CGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACGAGGCACCAGCACGATaGCGCCCCGACTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VAQRLTVSACSTPRGQRHEAPAR*RPDSAL
Trigger: CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTC...GTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCCCACTGTATTTCCATaGCAGCCAGGGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RYLPAPLHGARGTSTMPPPTVFP*QPGSRD
Trigger: GTCCCTGGACCCTGGCTGGCATGGAAATACAGTGGG...GGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
CDS-3UTR GCA 90 bp CAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACTTAGGCAGCTCCACGTaGGGAGTAGGGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRLTVSACSTPRGQRHQHLGSST*GVGAGQ
Trigger: CTGCCCCGCCCCTACTCCGCACGTGGAGCTGCCTAA...GTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCACCAGGTGCCGATTGTaGCAGCAGGTGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: PAPLHGARGTSTMPPRLGTRCRL*QQVNKM
Trigger: CATCTTGTTCACCTGCTGCCACAATCGGCACCTGGT...GCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: QRLTVSACSTPRGQRHQHLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...GTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR TCA 90 bp CTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTGGAGGCTGCCAAGGATAACGGGGGGCTGGTGCAGATaGAGACCTGCGTGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: LPLPNPGRPEAWRLPRITGGWCR*RPACPV
Trigger: TACCGGACACGCAGGTCTTCATCTGCACCAGCCCCC...CGTTATCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR TCA 90 bp CCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGGGGGCTGGTGCAGATaGAGACCTGCGTGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: PGSTALNGICLLHSTGPEGGWCR*RPACPV
Trigger: TACCGGACACGCAGGTCTTCATCTGCACCAGCCCCC...CTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR TCA 90 bp GCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGAGGGGGCTGGTGCAGATaGAGACCTGCGTGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: ALNGICLLHSTGPEAPARGGWCR*RPACPV
Trigger: TACCGGACACGCAGGTCTTCATCTGCACCAGCCCCC...TCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR TCA 90 bp GGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGCTGGCCACTTTATCCTaGAAGACAAGAGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPEAPARCRPDSALRWPLLATLS*KTRVLG
Trigger: ACCCAGAACTCTTGTCTTTCAGGATAAAGTGGCCAG...CAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCAGGGGGCAGGACCAGGTaGCGATTGTGGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TALNGICLLHSTGPEAPAGGRTR*RLWQQV
Trigger: CACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCC...TGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp TTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGGGGGCAGGACCAGGTaGCGATTGTGGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LTVSACSTPRGQRHQHDAGGRTR*RLWQQV
Trigger: CACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCC...GGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCGGGGGCAGGACCAGGTaGCGATTGTGGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ASPLIPAAQLRACYLRSPGGRTR*RLWQQV
Trigger: CACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCC...GGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR GCA 90 bp TTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCCCCGCTCATTCCCGCTaGGCAGCTCCGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LTVSACSTPRGQRHQHDAPAHSR*AAPRLL
Trigger: TAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG...GGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATTTAGCTCCAGCTGCTaGCCGCGGCATCCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: ALNGICLLHSTGPEAPARFSSSC*PRHPRS
Trigger: TGAGCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAA...TCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATTCCTTTAGCTCCAGCTaGTGCCCGCGGCATCCCCGC +
Preference number: 4 (lower is better)
Translates to: RLTVSACSTPRGQRHQHDSFSSS*CPRHPR
Trigger: GCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAAGGA...ATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGTGAGGCACCAGCACGATaGCGCCCCGACTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLIPAAQLRACYLRSPSSEAPAR*RPDSAL
Trigger: CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTC...ACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCGAGGCACCAGCACGATaGCGCCCCGACTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IPAHSRCAAPRLLSKISLEAPAR*RPDSAL
Trigger: CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTC...GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGGCGCTTAACGGTATCTaGCTGCTCCACTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: LGPGSTALNGICLLHSTGALNGI*LLHSTG
Trigger: CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC...CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGCGCTTAACGGTATCTaGCTGCTCCACTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: GLGPGSTALNGICLLHSTALNGI*LLHSTG
Trigger: CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC...CGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGCGCTTAACGGTATCTaGCTGCTCCACTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: AWGPVAQRLTVSACSTPRALNGI*LLHSTG
Trigger: CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC...CCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCCACTGTATTTCCATaGCAGCCAGGGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TVSACSTPRGQRHQHDAAPTVFP*QPGSRD
Trigger: GTCCCTGGACCCTGGCTGGCATGGAAATACAGTGGG...GGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
CDS-3UTR CCA 90 bp TATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGAATTCGTTCTACGAACTaGGGCCCCAGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YLPAPLHGARGTSTMPPRIRSTN*GPRCCS
Trigger: GGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAAT...TCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp TCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCACCAGGTGCCGATTGTaGCAGCAGGTGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: STPRGQRHQHDAAPTRLCTRCRL*QQVNKM
Trigger: CATCTTGTTCACCTGCTGCCACAATCGGCACCTGGT...GCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGACCAGGTGCCGATTGTaGCAGCAGGTGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: LHSTGPEAPARCRPDSALTRCRL*QQVNKM
Trigger: CATCTTGTTCACCTGCTGCCACAATCGGCACCTGGT...CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCTGCGGTGGCCCCTGTaGGCCTGCCCTTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LNGICLLHSTGPEAPARCLRWPL*ACPSFS
Trigger: GCTAAAGGAAGGGCAGGCCCACAGGGGCCACCGCAG...GCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp GTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGGAAAGACAAGAGTTCTaGGTCCCGGCTTCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: VSACSTPRGQRHQHDAAPERQEF*VPASRS
Trigger: GGAACGGGAAGCCGGGACCCAGAACTCTTGTCTTTC...CGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp GCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCACCCAGCGGTACTTCTaGGTTTCTGGTGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: APARCRPDSALRWPLWACTQRYF*VSGGFF
Trigger: AAAGAAACCACCAGAAACCCAGAAGTACCGCTGGGT...GCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR CCA 90 bp AATCCGGGCAGGCCAGAGGCCTGGAGGCTGCCAAGGATAACGGGTCCAACCTCGGGCAGGCCAGAGGCCTaGAGGCTGCCAAGGATAACG +
Preference number: 4 (lower is better)
Translates to: NPGRPEAWRLPRITGPTSGRPEA*RLPRIT
Trigger: CGTTATCCTTGGCAGCCTCCAGGCCTCTGGCCTGCC...CGAGGTTGGACCCGTTATCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR GCA 90 bp GCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGTTGTGCTCCAGCGGCACGTaGGGCTCCTCAGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AHSRCAAPRLLSKISLQLCSSGT*GSSGKR
Trigger: CCGCTTCCCTGAGGAGCCGCACGTGCCGCTGGAGCA...CAACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582170.1
CDS-3UTR GCA 90 bp TATTACTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTGGAGGCTGCCAAGGAGGGGGCAGGACCAGGTaGCGATTGTGGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: YYSLSLIRAGQRPGGCQGGGRTR*RLWQQV
Trigger: CACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCC...TCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAGTAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR GCA 90 bp GGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGGCGCAGCTCCGCGCTTaGTATCTAAGATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GPVAQRLTVSACSTPRGQAQLRA*YLRSPS
Trigger: GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGC...CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGGCGCAGCTCCGCGCTTaGTATCTAAGATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGPGSTALNGICLLHSTGAQLRA*YLRSPS
Trigger: GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGC...CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGTCCCGCTCATTCCCGCTaGGCAGCTCCGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: PLIPAAQLRACYLRSPSSPAHSR*AAPRLL
Trigger: TAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG...ACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR GCA 90 bp CGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATTTTAGCTCCAGCTGCTaGCCGCGGCATCCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RLTVSACSTPRGQRHQHDFSSSC*PRHPRS
Trigger: TGAGCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAA...ATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp CTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCTTTAGCTCCAGCTGCTaGCCGCGGCATCCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LNGICLLHSTGPEAPARCFSSSC*PRHPRS
Trigger: TGAGCGGGGATGCCGCGGGCAGCAGCTGGAGCTAAA...GCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp ACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCATGGCCCCTGTGGGCCTaGCCTTCCTTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TALNGICLLHSTGPEAPAWPLWA*PSFSSS
Trigger: GCTGGAGCTAAAGGAAGGGCAGGCCCACAGGGGCCA...TGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp TATTACTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTGGAGGCTGCCAAGGATTAGGCAGCTCCACGTaGGGAGTAGGGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YYSLSLIRAGQRPGGCQGLGSST*GVGAGQ
Trigger: CTGCCCCGCCCCTACTCCGCACGTGGAGCTGCCTAA...TCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAGTAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR GCA 90 bp CCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGTTTAGGCAGCTCCACGTaGGGAGTAGGGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLIPAAQLRACYLRSPSSLGSST*GVGAGQ
Trigger: CTGCCCCGCCCCTACTCCGCACGTGGAGCTGCCTAA...ACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR CCA 90 bp AGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGGGCTTCGTACACACTaGCCACTTTATCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: RHQHDAAPTRLCGGPCGPGLRTH*PLYPER
Trigger: TCTTTCAGGATAAAGTGGCCAGTGTGTACGAAGCCC...AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp GGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCACTTGGGGTCTCCTCCTaGCCTTCTCACCCACACAGT +
Preference number: 4 (lower is better)
Translates to: GPGSTALNGICLLHSTGPLGVSS*PSHPHS
Trigger: ACTGTGTGGGTGAGAAGGCCAGGAGGAGACCCCAAG...TGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580423.5
CDS-3UTR TCA 90 bp CCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGTGGGGGCTGGTGCAGATaGAGACCTGCGTGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: PLIPAAQLRACYLRSPSSGGWCR*RPACPV
Trigger: TACCGGACACGCAGGTCTTCATCTGCACCAGCCCCC...ACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582170.1
ENST00000582744.5
CDS-3UTR GCA 90 bp CGCGGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCGCGCAGCTCCGCGCTTaGTATCTAAGATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGIPAHSRCAAPRLLSKIAQLRA*YLRSPS
Trigger: GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGC...GATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR GCA 90 bp CTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCGCGCTTAACGGTATCTaGCTGCTCCACTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: LNGICLLHSTGPEAPARCALNGI*LLHSTG
Trigger: CCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGC...GCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CTGGGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCGGGCTTCGTACACACTaGCCACTTTATCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGLGPGSTALNGICLLHSGLRTH*PLYPPG
Trigger: ACCTGGCGGATAAAGTGGCCAGTGTGTACGAAGCCC...GGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR CCA 90 bp AGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCACCAAGGCTCCCGGGATaGGCTCCAGGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: STALNGICLLHSTGPEAPPRLPG*APGPGK
Trigger: TTTTCCTGGACCTGGAGCCCATCCCGGGAGCCTTGG...TGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp AACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCGAAAGACAAGAGTTCTaGGTCCCGGCTTCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: NGICLLHSTGPEAPARCRERQEF*VPASRS
Trigger: GGAACGGGAAGCCGGGACCCAGAACTCTTGTCTTTC...GCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp AGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCGCAGCTCCGCGCTTaGTATCTAAGATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: STALNGICLLHSTGPEAPAQLRA*YLRSPS
Trigger: GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGC...TGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GCGGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTGCGCAGCTCCGCGCTTaGTATCTAAGATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: AASPLIPAAQLRACYLRSAQLRA*YLRSPS
Trigger: GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGC...AGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR GCA 90 bp GCGGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTTTAACGGTATCTGCCTaGTCCACTCCACGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AASPLIPAAQLRACYLRSLTVSA*STPRGQ
Trigger: CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAA...AGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR GCA 90 bp GTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCCCACTGTATTTCCATaGCAGCCAGGGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VAQRLTVSACSTPRGQRHPTVFP*QPGSRD
Trigger: GTCCCTGGACCCTGGCTGGCATGGAAATACAGTGGG...GTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
CDS-3UTR CCA 90 bp GCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCATTCGTTCTACGAACTaGGGCCCCAGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ASPLIPAAQLRACYLRSPIRSTN*GPRCCS
Trigger: GGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAAT...GGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR CCA 90 bp GTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGGGGCTTCGTACACACTaGCCACTTTATCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VSACSTPRGQRHQHDAAPGLRTH*PLYPER
Trigger: TCTTTCAGGATAAAGTGGCCAGTGTGTACGAAGCCC...CGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CCA 90 bp TCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCGATGTGCTCCCAGCTTaGGGTCTCCTCCTCGAACTG +
Preference number: 4 (lower is better)
Translates to: SPLIPAAQLRACYLRSPSDVLPA*GLLLEL
Trigger: CAGTTCGAGGAGGAGACCCCAAGCTGGGAGCACATC...GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582170.1
3UTR CAA 72 bp GGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTCCAGTTGTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GIPAHSRCAAPR*LSKISLQLSLQ
Trigger: CTGGAGTGACAACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR TCA 90 bp ACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCAGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TALNGICLLHSTGPEAPADCGSR*TRCAPS
Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...TGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR TCA 90 bp CCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PAHSRCAAPRLLSKISLQDCGSR*TRCAPS
Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...CTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR TCA 90 bp GCGGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: AASPLIPAAQLRACYLRSDCGSR*TRCAPS
Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...AGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR CCA 90 bp TCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCGGGCTTCGTACACACTaGCCACTTTATCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPLIPAAQLRACYLRSPSGLRTH*PLYPPG
Trigger: ACCTGGCGGATAAAGTGGCCAGTGTGTACGAAGCCC...GGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582170.1
CDS-3UTR CCA 90 bp CAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACACCAGGTGCCGATTGTaGCAGCAGGTGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: QRLTVSACSTPRGQRHQHTRCRL*QQVNKM
Trigger: CATCTTGTTCACCTGCTGCCACAATCGGCACCTGGT...GTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR TCA 90 bp ATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: IPAHSRCAAPRLLSKISLDCGSR*TRCAPS
Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR TCA 90 bp CTGGGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCCTGGCCACTTTATCCTaGAAGACAAGAGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGLGPGSTALNGICLLHSLATLS*KTRVLG
Trigger: ACCCAGAACTCTTGTCTTTCAGGATAAAGTGGCCAG...GGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582160.5
ENST00000582744.5
CDS-3UTR TCA 90 bp CGCGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGCCCTGGCCTAGGACAGTaGAAGACAGCGCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RAAICHGYYYSLSLIRAGPGLGQ*KTARCH
Trigger: ATGGCAGCGCGCTGTCTTTCACTGTCCTAGGCCAGG...GCCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCATGACAGATGGCAGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR CCA 90 bp TATTACTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTGGAGGCTGCCAAGGAGAAAGACAAGAGTTCTaGGTCCCGGCTTCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: YYSLSLIRAGQRPGGCQGERQEF*VPASRS
Trigger: GGAACGGGAAGCCGGGACCCAGAACTCTTGTCTTTC...TCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAGTAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR CCA 90 bp GCGCGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGATTCGTTCTACGAACTaGGGCCCCAGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ARCHLSWVLLLPLPNPGRIRSTN*GPRCCS
Trigger: GGAGCAGCACCTGGGGCCCCAGTTCGTAGAACGAAT...CCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCATGACAGATGGCAGCGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR CCA 90 bp ATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGTTGTCACGGGCTTCGTACACACTaGCCACTTTATCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: IPAAQLRACYLRSPSSCHGLRTH*PLYPPG
Trigger: ACCTGGCGGATAAAGTGGCCAGTGTGTACGAAGCCC...GTGACAACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580758.5
CDS-3UTR CCA 90 bp GAGGCCTGGAGGCTGCCAAGGATAACGGGTCCAACCTCGAACTGTGTCCTTGTCACCAGGTGCCGATTGTaGCAGCAGGTGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: EAWRLPRITGPTSNCVLVTRCRL*QQVNKM
Trigger: CATCTTGTTCACCTGCTGCCACAATCGGCACCTGGT...GACAAGGACACAGTTCGAGGTTGGACCCGTTATCCTTGGCAGCCTCCAGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR CCA 90 bp GCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGTTGACCAGGTGCCGATTGTaGCAGCAGGTGAACAAGATG +
Preference number: 4 (lower is better)
Translates to: AHSRCAAPRLLSKISLQLTRCRL*QQVNKM
Trigger: CATCTTGTTCACCTGCTGCCACAATCGGCACCTGGT...CAACTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR CCA 90 bp CGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATACCCAGCGGTACTTCTaGGTTTCTGGTGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RLTVSACSTPRGQRHQHDTQRYF*VSGGFF
Trigger: AAAGAAACCACCAGAAACCCAGAAGTACCGCTGGGT...ATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR CCA 90 bp CGCGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGCCTTGGGGTCTCCTCCTaGCCTAGGACAGTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RAAICHGYYYSLSLIRAGLGVSS*PRTVKD
Trigger: GTCTTTCACTGTCCTAGGCCAGGAGGAGACCCCAAG...GCCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCATGACAGATGGCAGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR TCA 90 bp CGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGCCAGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RCHLSWVLLLPLPNPGRPDCGSR*TRCAPS
Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...TGGCCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCATGACAGATGGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR CCA 90 bp GAGGCCTGGAGGCTGCCAAGGATAACGGGTCCAACCTCGAACTGTGTCCTTGTCACCCAGCGGTACTTCTaGGTTTCTGGTGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EAWRLPRITGPTSNCVLVTQRYF*VSGGFF
Trigger: AAAGAAACCACCAGAAACCCAGAAGTACCGCTGGGT...GACAAGGACACAGTTCGAGGTTGGACCCGTTATCCTTGGCAGCCTCCAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR CCA 90 bp CGCGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGCGGGCTTCGTACACACTaGCCACTTTATCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: RAAICHGYYYSLSLIRAGGLRTH*PLYPER
Trigger: TCTTTCAGGATAAAGTGGCCAGTGTGTACGAAGCCC...GCCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCATGACAGATGGCAGCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR CCA 90 bp TATTATTACTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTGGAGGCTGCCAACGCTGCCATCTGTCATaGGTATTATTACTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: YYYSLSLIRAGQRPGGCQRCHLS*VLLLPL
Trigger: GAGAGGGAGTAATAATACCCATGACAGATGGCAGCG...TTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAGTAATAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS-3UTR TCA 90 bp CGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGCCACTGGCCACTTTATCCTaGAAGACAAGAGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RCHLSWVLLLPLPNPGRPLATLS*KTRVLG
Trigger: ACCCAGAACTCTTGTCTTTCAGGATAAAGTGGCCAG...TGGCCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCATGACAGATGGCAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS GCA 90 bp GACCCTGCGCCCCCTACCGCCAGGTCGGGCCGCAGGGCGCGGTACTaGTCGCGGGCCAGGAAGCCGCGGCGTTGCTCCAGCGGCACGTGC +
Preference number: 5 (lower is better)
Translates to: DPAPPTARSGRRARY*SRARKPRRCSSGTC
Trigger: GCACGTGCCGCTGGAGCAACGCCGCGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGCGGCCCGACCTGGCGGTAGGGGGCGCAGGGTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583655.5
CDS GCA 90 bp GGCCGCAGGGCGCGGTACTGCTCGCGGGCCAGGAAGCCGCGGCGTTaGTCCAGCGGCACGTGCGGCTCCTCAGGGAAGCGGCGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GRRARYCSRARKPRR*SSGTCGSSGKRRRK
Trigger: CTTCCGCCGCCGCTTCCCTGAGGAGCCGCACGTGCCGCTGGAGCAACGCCGCGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGCGGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000245552.7
ENST00000578095.1
ENST00000578407.5
ENST00000579023.5
ENST00000579082.1
ENST00000580758.5
ENST00000582170.1
ENST00000583655.5
CDS-3UTR CAA 90 bp GCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCAGAGCAGCCGTCTCCTaGTCGGGGGCAGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: APARCRPDSALRWPLWACRAAVS*SGAGPG
Trigger: ACCTGGTCCTGCCCCCGACAAGGAGACGGCTGCTCT...GCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp ACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCAGGAAGCCGCGGCGTaGCTCCAGCGGCACGTGCGG +
Preference number: 5 (lower is better)
Translates to: TVSACSTPRGQRHQHDAAQEAAA*LQRHVR
Trigger: CCGCACGTGCCGCTGGAGCAACGCCGCGGCTTCCTG...GGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR CAA 90 bp GGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGCAGGAAGCCGCGGCGTaGCTCCAGCGGCACGTGCGG +
Preference number: 5 (lower is better)
Translates to: GLGPGSTALNGICLLHSTQEAAA*LQRHVR
Trigger: CCGCACGTGCCGCTGGAGCAACGCCGCGGCTTCCTG...CGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
CDS-3UTR CAA 90 bp CTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCAGAGCAGCCGTCTCCTaGTCGGGGGCAGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: LPAPLHGARGTSTMPPRLRAAVS*SGAGPG
Trigger: ACCTGGTCCTGCCCCCGACAAGGAGACGGCTGCTCT...GAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp CGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: RGQRHQHDAAPTRLCGGPCAAPR*LSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCA...GGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp ACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCAGGACCAGGTGCCGATaGTGGCAGCAGGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: TSTMPPRLGSAVAPVGLPRTRCR*WQQVNK
Trigger: CTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCT...GGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp ACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTGCCCTGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: TSTMPPRLGSAVAPVGLPCAAPR*LSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCA...GGGCAGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp GGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCAGGAAGCCGCGGCGTaGCTCCAGCGGCACGTGCGG +
Preference number: 5 (lower is better)
Translates to: GIPAHSRCAAPRLLSKISQEAAA*LQRHVR
Trigger: CCGCACGTGCCGCTGGAGCAACGCCGCGGCTTCCTG...GGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582170.1
CDS-3UTR CAA 90 bp CCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGAGGACCAGGTGCCGATaGTGGCAGCAGGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: PLHGARGTSTMPPRLGSARTRCR*WQQVNK
Trigger: CTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCT...CGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp AGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTGGCCCCTGTGGGCCTTGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: RHQHDAAPTRLCGGPCGPCAAPR*LSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCA...AGGCCCACAGGGGCCACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp ACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGCGGTAGATGTGCTCCCAGCTaGGGGTCTCCTCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: TPRGQRHQHDAAPTRLCGRCAPS*GSPPGL
Trigger: AAGGCCAGGAGGAGACCCCAAGCTGGGAGCACATCT...ACCGCAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580423.5
CDS-3UTR CAA 90 bp TGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCAGGACCAGGTGCCGATaGTGGCAGCAGGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: CSTPRGQRHQHDAAPTRLRTRCR*WQQVNK
Trigger: CTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCT...GAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp GCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGAGAGCAGCCGTCTCCTaGTCGGGGGCAGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: AWGPVAQRLTVSACSTPRRAAVS*SGAGPG
Trigger: ACCTGGTCCTGCCCCCGACAAGGAGACGGCTGCTCT...CCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp CTGGGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCAGAGCAGCCGTCTCCTaGTCGGGGGCAGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: LGLGPGSTALNGICLLHSRAAVS*SGAGPG
Trigger: ACCTGGTCCTGCCCCCGACAAGGAGACGGCTGCTCT...GGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp CTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGACTCGGCTCTGTGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LHSTGPEAPARCRPDSALCAAPR*LSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCA...CAGAGCCGAGTCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS CCA 90 bp CCGGTAGGTCGTTCATCTCCCGCACAGCGTCCAAGGCTCCCGGGATaGGCTCCAGGTCCAGGAAAAAGCCCGGGGCTTCGTACACACTGG +
Preference number: 5 (lower is better)
Translates to: PVGRSSPAQRPRLPG*APGPGKSPGLRTHW
Trigger: CCAGTGTGTACGAAGCCCCGGGCTTTTTCCTGGACCTGGAGCCCATCCCGGGAGCCTTGGACGCTGTGCGGGAGATGAACGACCTACCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000245552.7
ENST00000577523.5
ENST00000578095.1
ENST00000578337.1
ENST00000578407.5
ENST00000579023.5
ENST00000579082.1
ENST00000580758.5
ENST00000582160.5
ENST00000582170.1
ENST00000582744.5
ENST00000583655.5
CDS-3UTR CAA 90 bp CCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTCCAGAGAGCAGCCGTCTCCTaGTCGGGGGCAGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: PAHSRCAAPRLLSKISLQRAAVS*SGAGPG
Trigger: ACCTGGTCCTGCCCCCGACAAGGAGACGGCTGCTCT...CTGGAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR CAA 90 bp GCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCAGAGCAGCCGTCTCCTaGTCGGGGGCAGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: ASPLIPAAQLRACYLRSPRAAVS*SGAGPG
Trigger: ACCTGGTCCTGCCCCCGACAAGGAGACGGCTGCTCT...GGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR CAA 90 bp TATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCAGCACGATGCCGCCCCGATGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: YLPAPLHGARGTSTMPPRCAAPR*LSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCA...TCGGGGCGGCATCGTGCTGGTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp GGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGACCAGGTGCCGATaGTGGCAGCAGGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: GPVAQRLTVSACSTPRGQRTRCR*WQQVNK
Trigger: CTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCT...CTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp CCCGCGGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGAAGGACCAGGTGCCGATaGTGGCAGCAGGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: PAASPLIPAAQLRACYLRRTRCR*WQQVNK
Trigger: CTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCT...TCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580758.5
ENST00000582744.5
CDS-3UTR CAA 90 bp GGCCTGGGGCCCGGTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGAGGACCAGGTGCCGATaGTGGCAGCAGGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: GLGPGSTALNGICLLHSTRTRCR*WQQVNK
Trigger: CTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCT...CGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTACCGGGCCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245552.7
ENST00000578407.5
ENST00000580423.5
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp CTCCCTCTCCCTAATCCGGGCAGGCCAGAGGCCTGGAGGCTGCCAAGGATAACGAGATGTGCTCCCAGCTaGGGGTCTCCTCCTGGCCTA +
Preference number: 5 (lower is better)
Translates to: LPLPNPGRPEAWRLPRITRCAPS*GSPPGL
Trigger: TAGGCCAGGAGGAGACCCCAAGCTGGGAGCACATCT...CGTTATCCTTGGCAGCCTCCAGGCCTCTGGCCTGCCCGGATTAGGGAGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS CCA 90 bp GGGCTTCGTACACACTGGCCACTTTATCCTGAAAGACAAGAGTTCTaGGTCCCGGCTTCCCGTTCCCGCGAGGACCCGCAGGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GLRTHWPLYPERQEF*VPASRSREDPQGGS
Trigger: GGAGCCTCCCTGCGGGTCCTCGCGGGAACGGGAAGCCGGGACCCAGAACTCTTGTCTTTCAGGATAAAGTGGCCAGTGTGTACGAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577523.5
ENST00000582160.5
ENST00000582744.5
ENST00000583655.5
CDS-3UTR CAA 90 bp CGCGGCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCAGGACCAGGTGCCGATaGTGGCAGCAGGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: RGIPAHSRCAAPRLLSKIRTRCR*WQQVNK
Trigger: CTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCT...GATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR CAA 90 bp GCATCCCCGCTCATTCCCGCTGCGCAGCTCCGCGCTTGCTATCTAAGATCTCCCTGCGCAGCTCCGCGCTaGCTATCTAAGATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: ASPLIPAAQLRACYLRSPCAAPR*LSKISL
Trigger: GAGGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCA...GGGAGATCTTAGATAGCAAGCGCGGAGCTGCGCAGCGGGAATGAGCGGGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580758.5
ENST00000582170.1
ENST00000582744.5
CDS-3UTR CAA 90 bp GTAGCACAGCGCTTAACGGTATCTGCCTGCTCCACTCCACGGGGCCAGAGGCACCCTCGAACTGTGTCCTaGTCATCAATGAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VAQRLTVSACSTPRGQRHPRTVS*SSMSRS
Trigger: GGACCTGCTCATTGATGACAAGGACACAGTTCGAGG...GTGCCTCTGGCCCCGTGGAGTGGAGCAGGCAGATACCGTTAAGCGCTGTGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245552.7
ENST00000580758.5
ENST00000582160.5
ENST00000582744.5
CDS-3UTR CAA 90 bp CGCGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGCAGGACCAGGTGCCGATaGTGGCAGCAGGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: RAAICHGYYYSLSLIRAGRTRCR*WQQVNK
Trigger: CTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCT...GCCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCATGACAGATGGCAGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS TCA 90 bp CAGGTGCTGCTCCACCCAGCGGTACTGTGTAGAAAACACAGTCTGTaGGTAGGGCCTGATGGAAGCCGGAATTCAGGGATAGGGACTTGG +
Preference number: 5 (lower is better)
Translates to: QVLLHPAVLCRKHSL*VGPDGSRNSGIGTW
Trigger: CCAAGTCCCTATCCCTGAATTCCGGCTTCCATCAGGCCCTACTCACAGACTGTGTTTTCTACACAGTACCGCTGGGTGGAGCAGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584352.1
CDS-3UTR CAA 90 bp CGCTGCCATCTGTCATGGGTATTATTACTCCCTCTCCCTAATCCGGGCAGGCCACCTCGAACTGTGTCCTaGTCATCAATGAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RCHLSWVLLLPLPNPGRPPRTVS*SSMSRS
Trigger: GGACCTGCTCATTGATGACAAGGACACAGTTCGAGG...TGGCCTGCCCGGATTAGGGAGAGGGAGTAATAATACCCATGACAGATGGCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578337.1
CDS GCA 72 bp CCCCCTACCGCCAGGTCGGGCCGCAGGGCGCGGTACTaGTCGCGGGCCAGGAAGCCGCGGCGTTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PPTARSGRRARY*SRARKPRRCSS
Trigger: GCTGGAGCAACGCCGCGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGCGGCCCGACCTGGCGGTAGGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583655.5
CDS CCA 72 bp GCTTCCCGTTCCCGCGAGGACCCGCAGGGAGGCTCCTaGGGGCTCCGGGCCCGAGCTCAGAGGGGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: ASRSREDPQGGS*GLRARAQRGGG
Trigger: CCCTCCGCCCCTCTGAGCTCGGGCCCGGAGCCCCCAGGAGCCTCCCTGCGGGTCCTCGCGGGAACGGGAAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000577523.5
ENST00000582160.5
ENST00000582744.5
ENST00000583655.5
CDS GCA 72 bp ACTTTATCCGCCAGGTCGGGCCGCAGGGCGCGGTACTaGTCGCGGGCCAGGAAGCCGCGGCGTTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TLSARSGRRARY*SRARKPRRCSS
Trigger: GCTGGAGCAACGCCGCGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGCGGCCCGACCTGGCGGATAAAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000245552.7
ENST00000578095.1
ENST00000578407.5
ENST00000579023.5
ENST00000579082.1
ENST00000580758.5
ENST00000582170.1
CDS TCA 72 bp CTCCTCCCCAGGGTGCGCTGCCCGCGGGTTCCAGGGTaGGAGCTCTGCGCCCTTCACAGAGAAGGGGGAGAC +
Preference number: 6 (lower is better)
Translates to: LLPRVRCPRVPG*ELCALHREGGD
Trigger: GTCTCCCCCTTCTCTGTGAAGGGCGCAGAGCTCTCACCCTGGAACCCGCGGGCAGCGCACCCTGGGGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583655.5
CDS CCA 72 bp CGTTCATCTCCCGCACAGCGTCCAAGGCTCCCGGGATaGGCTCCAGGTCCAGGAAAAAGCCCGGGGCTTCGT +
Preference number: 6 (lower is better)
Translates to: RSSPAQRPRLPG*APGPGKSPGLR
Trigger: ACGAAGCCCCGGGCTTTTTCCTGGACCTGGAGCCCATCCCGGGAGCCTTGGACGCTGTGCGGGAGATGAACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000245552.7
ENST00000577523.5
ENST00000578095.1
ENST00000578337.1
ENST00000578407.5
ENST00000579023.5
ENST00000579082.1
ENST00000580758.5
ENST00000582160.5
ENST00000582170.1
ENST00000582744.5
ENST00000583655.5
CDS TCA 72 bp CACAGTGGTGGTACTTCAGCAGGGGGCTGGTGCAGATaGAGACCTGCGTGTCCGGTAGGTCGTTCATCTCCC +
Preference number: 6 (lower is better)
Translates to: HSGGTSAGGWCR*RPACPVGRSSP
Trigger: GGGAGATGAACGACCTACCGGACACGCAGGTCTTCATCTGCACCAGCCCCCTGCTGAAGTACCACCACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000245552.7
ENST00000578337.1
ENST00000578407.5
ENST00000579082.1
ENST00000580423.5
ENST00000582160.5
ENST00000582170.1
ENST00000582744.5
CDS CCA 72 bp ACACACTGGCCACTTTATCCTGAAAGACAAGAGTTCTaGGTCCCGGCTTCCCGTTCCCGCGAGGACCCGCAG +
Preference number: 6 (lower is better)
Translates to: THWPLYPERQEF*VPASRSREDPQ
Trigger: CTGCGGGTCCTCGCGGGAACGGGAAGCCGGGACCCAGAACTCTTGTCTTTCAGGATAAAGTGGCCAGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577523.5
ENST00000582160.5
ENST00000582744.5
ENST00000583655.5
CDS CAA 72 bp GCTCCCAGCTTGGGGTCTCCTCCTCGAACTGTGTCCTaGTCATCAATGAGCAGGTCCCCCAAGACCACCGTC +
Preference number: 6 (lower is better)
Translates to: APSLGSPPRTVS*SSMSRSPKTTV
Trigger: GACGGTGGTCTTGGGGGACCTGCTCATTGATGACAAGGACACAGTTCGAGGAGGAGACCCCAAGCTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582170.1
CDS TCA 72 bp AAGCCCGGGGCTTCGTACACACTGGCCACTTTATCCTaGAAGACAAGAGTTCTGGGTCCCGGCTTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: KPGASYTLATLS*KTRVLGPGFPF
Trigger: GAACGGGAAGCCGGGACCCAGAACTCTTGTCTTTCAGGATAAAGTGGCCAGTGTGTACGAAGCCCCGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577523.5
ENST00000578337.1
ENST00000582160.5
ENST00000582744.5
ENST00000583655.5
CDS CCA 72 bp CCAGGTCCAGGAAAAAGCCCGGGGCTTCGTACACACTaGCCACTTTATCCTGAAAGACAAGAGTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PGPGKSPGLRTH*PLYPERQEFWV
Trigger: GACCCAGAACTCTTGTCTTTCAGGATAAAGTGGCCAGTGTGTACGAAGCCCCGGGCTTTTTCCTGGACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577523.5
ENST00000578337.1
ENST00000582160.5
ENST00000582744.5
ENST00000583655.5
CDS TCA 72 bp CTCCACCCAGCGGTACTGTGTAGAAAACACAGTCTGTaGGTAGGGCCTGATGGAAGCCGGAATTCAGGGATA +
Preference number: 6 (lower is better)
Translates to: LHPAVLCRKHSL*VGPDGSRNSGI
Trigger: TATCCCTGAATTCCGGCTTCCATCAGGCCCTACTCACAGACTGTGTTTTCTACACAGTACCGCTGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584352.1